RPSBLAST alignment of GI: 254781076 and MMDB domain: 1i39_A_1-182

>1i39_A (A:1-182) Ribonuclease HII, RNAse HII; mixed beta sheet, helix-loop-helix, hydrolase; 1.95A {Archaeoglobus fulgidus}Length = 182
 Score =  175 bits (444), Expect = 5e-45
 Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 13/177 (7%)

Query: 9   RPHFELEAMVREKNMWPVAGIDEVGRGALAGPVVVAAIILDPNNI--PFGINDSKKISHK 66
             H    + +  +     AGIDE G+G + GP+VVA +     +     G+ DSKK+S  
Sbjct: 5   HHHHHHSSGLVPRGSHMKAGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSKKLSQG 64

Query: 67  KREELYEKITSSAIISISSASHQYIDKHNIHKATLDAIYHAVEN--LQVIPRSALIDGRS 124
           +REEL E+I       +   S + +D+    K   + +        L++ P  A +D   
Sbjct: 65  RREELAEEIRKICRTEVLKVSPENLDERMAAKTINEILKECYAEIILRLKPEIAYVDSPD 124

Query: 125 IPED---------LPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYG 172
           +  +            +  A  K D     +AAASIIAKV R+R +    +K+ D+G
Sbjct: 125 VIPERLSRELEEITGLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGDFG 181