RPSBLAST alignment of GI: 254781076 and MMDB domain: 2etj_A_1-171

>2etj_A (A:1-171) Ribonuclease HII, RNAse HII; TM0915, ribonuclease HII (EC 3.1.26.4) (RNAse HII), structural genomics, joint center for structural genomics; 1.74A {Thermotoga maritima}Length = 171

 Score =  180 bits (459), Expect = 1e-46
 Identities = 73/166 (43%), Positives = 95/166 (57%), Gaps = 4/166 (2%)

Query: 9   RPHFELEAMVREKNMWPVAGIDEVGRGALAGPVVVAAIILDPNNIPFGINDSKKISHKKR 68
             H      + +K    VAG+DE GRG LAGPVV AA++L+      GINDSK++S  KR
Sbjct: 9   HHHHXGIDELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKE--IEGINDSKQLSPAKR 66

Query: 69  EELYEKITSSAIISISSASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPED 128
           E L ++I   A + I  AS + ID +NI  AT  A   A+ENL V P   L+DG+ I   
Sbjct: 67  ERLLDEIXEKAAVGIGIASPEEIDLYNIFNATKLAXNRALENLSVKPSFVLVDGKGIELS 126

Query: 129 LPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFD 174
           +P     ++KGD  S  I AASI+AKV RDRL    H+ YP + F 
Sbjct: 127 VPGT--CLVKGDQKSKLIGAASIVAKVFRDRLXSEFHRXYPQFSFH 170