RPSBLAST alignment of GI: 254781076 and protein with PDBid: 1eke

>1eke_A Ribonuclease HII; endonuclease, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: MES; 2.00A {Methanocaldococcus jannaschii} SCOP: c.55.3.1 Length = 230
 Score =  175 bits (446), Expect = 5e-45
 Identities = 50/216 (23%), Positives = 82/216 (37%), Gaps = 34/216 (15%)

Query: 26  VAGIDEVGRGALAGPVVVAAIILDPNNIPF----GINDSKKISHKKREELYEKITSSAII 81
           + GIDE GRG + GP+VV A  ++          G+ DSK+++  KR  L + + +   +
Sbjct: 3   IIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVKDSKELTKNKRAYLKKLLENLGYV 62

Query: 82  SISSASHQYID----KHNIHKATLDAIYHAVENL------QVIPRSALIDGRSIPE---- 127
                  + I+      N++   ++A     +NL      +       ID  S       
Sbjct: 63  EKRILEAEEINQLMNSINLNDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKFE 122

Query: 128 --------------DLPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGF 173
                         +L  +  A  K D+    ++AASIIAK  RD ++    K Y D G 
Sbjct: 123 DSFKDKIEDIIKERNLNIKIIAEHKADAKYPVVSAASIIAKAERDEIIDYYKKIYGDIGS 182

Query: 174 DSHVGYPTAKH--QQVIKEKGPSCIHRLTFRPLRNL 207
                  T K       K K    I R  ++  + +
Sbjct: 183 GYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRI 218