RPSBLAST alignment of GI: 254781076 and protein with PDBid: 1uax

>1uax_A Ribonuclease HII, ribonuclease H2; RNA*DNA hybrid ribonucleotidohydrolase; 2.00A {Pyrococcus horikoshii OT3} SCOP: c.55.3.1 Length = 220

 Score =  130 bits (328), Expect = 2e-31
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 20/202 (9%)

Query: 26  VAGIDEVGRGALAGPVVVAAIILDPNNIPF----GINDSKKISHKKREELYEKITSSAII 81
           VAG+DE GRG + GP+V+   ++D  NI      G+ DSK+++  +RE+L+ K+      
Sbjct: 3   VAGVDEAGRGPVIGPLVIGVAVIDEKNIERLRDIGVKDSKQLTPGQREKLFSKLIDILDD 62

Query: 82  SISSASHQYID---KHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPED---------- 128
                          H++++   +    A+ +L++ P+   +D   +             
Sbjct: 63  YYVLLVTPKEIDERHHSMNELEAEKFVVALNSLRIKPQKIYVDSADVDPKRFASLIKAGL 122

Query: 129 -LPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKH-QQ 186
                  A  K D+    ++AASIIAKVTRDR +    +KY ++G        T +  ++
Sbjct: 123 KYEATVIAEHKADAKYEIVSAASIIAKVTRDREIEKLKQKYGEFGSGYPSDPRTKEWLEE 182

Query: 187 VIKEKGPSC-IHRLTFRPLRNL 207
             K+ G    I R T+   R +
Sbjct: 183 YYKQYGDFPPIVRRTWETARKI 204