RPSBLAST alignment of GI: 254781076 and protein with PDBid: 3kio
>3kio_A Ribonuclease H2 subunit A; aicardi-goutieres syndrome, RNAse H2, protein complex, autoimmune disease, endonuclease, hydrolase, metal-binding; 2.90A {Mus musculus} Length = 301
Score = 154 bits (391), Expect = 9e-39
Identities = 44/221 (19%), Positives = 75/221 (33%), Gaps = 34/221 (15%)
Query: 21 KNMWPVAGIDEVGRGALAGPVVVAAIILDPNNIPF----GINDSKKISHKKREELYEKIT 76
V G+DE GRG + GP+V A + + + DSK ++ +RE L+ K+
Sbjct: 25 LKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERERLFAKME 84
Query: 77 SSAI---ISISSASHQYIDKHNIHKATLDAIY----------HAVENLQVIPRSALIDGR 123
++ S I + + + + V +D
Sbjct: 85 EDGDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTAAGLIQYALDQNVNVTQVFVDTV 144
Query: 124 SIPEDL---------PCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFD 174
+PE + K DS+ ++AASI AKV RD+ ++ D
Sbjct: 145 GMPETYQARLQQHFPGIEVTVKAKADSLFPVVSAASIFAKVARDKAVKNWQFVENLQDLD 204
Query: 175 SHV--GYPTAKH------QQVIKEKGPSCIHRLTFRPLRNL 207
S GYP + V G R ++ + +
Sbjct: 205 SDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAI 245