RPSBLAST alignment of GI: 254781076 and SCOP domain: d1i39a_

Alignment

 Score =  121 bits (304), Expect = 4e-29
 Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 14/195 (7%)

Query: 27  AGIDEVGRGALAGPVVVAAIILDPNNI--PFGINDSKKISHKKREELYE----------- 73
           AGIDE G+G + GP+VVA +     +     G+ DSKK+S  +REEL E           
Sbjct: 3   AGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSKKLSQGRREELAEEIRKICRTEVL 62

Query: 74  KITSSAIISISSASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPEDLPCQA 133
           K++   +    +A          +   +  +   +  +           R + E    + 
Sbjct: 63  KVSPENLDERMAAKTINEILKECYAEIILRLKPEIAYVDSPDVIPERLSRELEEITGLRV 122

Query: 134 FAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKHQQVIKEKGP 193
            A  K D     +AAASIIAKV R+R +    +K+ D+G        T +  +     G 
Sbjct: 123 VAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGDFGSGYASDPRTREVLKEWIASGR 182

Query: 194 SC-IHRLTFRPLRNL 207
                R+ ++ + NL
Sbjct: 183 IPSCVRMRWKTVSNL 197

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: Class II ribonuclease H (RNase HII)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]