RPSBLAST alignment of GI: 254781076 and SCOP domain: d1io2a_

Alignment

 Score =  146 bits (370), Expect = 1e-36
 Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 28/206 (13%)

Query: 26  VAGIDEVGRGALAGPVVVAAIILDPNNIP----FGINDSKKISHKKREELYEKITSSAII 81
           +AGIDE GRG + GP+V+AA+++D N++P      + DSKK++ K+RE+L+ +I      
Sbjct: 3   IAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDD 62

Query: 82  SI---SSASHQYIDKHNIHKATLDAIYHAVENLQVIPRSALIDGRSIPED---------- 128
            +            +  +++  ++    A+ +L+V P     D   + E+          
Sbjct: 63  YVILELPPDVIGSREGTLNEFEVENFAKALNSLKVKPDVIYADAADVDEERFARELGERL 122

Query: 129 -LPCQAFAVIKGDSISLSIAAASIIAKVTRDRLMRIAHKKYPDYGFDSHVGYPTAKHQQV 187
               +  A  K D I   ++AASI+AKVTRDR +    ++Y + G     GYP+    + 
Sbjct: 123 NFEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYGEIGS----GYPSDPRTRA 178

Query: 188 IKEK------GPSCIHRLTFRPLRNL 207
             E           I R  ++ L+ +
Sbjct: 179 FLENYYREHGEFPPIVRKGWKTLKKI 204

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: Class II ribonuclease H (RNase HII)
species: Archaeon Thermococcus kodakaraensis [TaxId: 311400]