HHsearch alignment for GI: 254781078 and conserved domain: pfam02530
>pfam02530 Porin_2 Porin subfamily. This family consists of porins from the alpha subdivision of Proteobacteria the members of this family are related to pfam00267. The porins form large aqueous channels in the cell membrane allowing the selective entry of hydrophilic compounds this so called 'molecular sieve' is found in the cell walls of gram negative bacteria.
Probab=99.33 E-value=4.5e-11 Score=79.19 Aligned_cols=88 Identities=13% Similarity=0.110 Sum_probs=60.8
Q ss_pred EEEEEEEEEEEEEEC-CEEEEEEEEEEEEEEECCCCCC-----------------------CCCCC-CCCCCCCCCCCCE
Q ss_conf 036798999863314-4034444011457530110002-----------------------36666-5555434556530
Q gi|254781078|r 127 FIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEK-----------------------VESDN-SKNAKGRFDGHGS 181 (242)
Q Consensus 127 ~~~Gsvr~r~Gya~~-~~l~Y~~gG~A~~~~~~~~~~~-----------------------~~~~~-~~~~~~~~d~t~~ 181 (242)
T Consensus 246 ~~~~Av~~~~~~~~g~g~s~~l~g~Y~~ga~~Y~~~~~~~~~~~~Wav~~~~~~~~t~k~~~~~~~~~~~~~~~~~~d~~ 325 (378)
T pfam02530 246 KEEGAVRARLSVKAGDGDTLNIAGGYASGANRYTGDSEYHNWGGNWAVWAGYTYKATDKTAITPGAQWGGAGNVCNPDFD 325 (378)
T ss_pred CCCEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCCCCCCCCCC
T ss_conf 42504489999986798458999998158742235544434677503776568623330898203375024543477754
Q ss_pred EEEEEEEEEEECCCCEEEEEEEEEEECCCCEEE
Q ss_conf 379873166732787688889888744873000
Q gi|254781078|r 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214 (242)
Q Consensus 182 G~tvGaGVEYait~nwslraEY~Y~d~g~~~~~ 214 (242)
T Consensus 326 ~~~vg~nv~ytpV~nl~~~~Ev~Yt~~d~k~~g 358 (378)
T pfam02530 326 GWAVGANVDYTIVDNLTFTAEVRYTDLGQKYFG 358 (378)
T ss_pred EEEEEEEEEEEECCCEEEEEEEEEEECCCCCCC
T ss_conf 268888788788099689789999746874456