HHsearch alignment for GI: 254781078 and conserved domain: pfam03349
>pfam03349 Toluene_X Outer membrane protein transport protein (OMPP1/FadL/TodX). This family includes TodX from Pseudomonas putida F1 and TbuX from Ralstonia pickettii PKO1. These are membrane proteins of uncertain function that are involved in toluene catabolism. Related proteins involved in the degradation of similar aromatic hydrocarbons are also in this family, such as CymD. This family also includes FadL involved in translocation of long-chain fatty acids across the outer membrane. It is also a receptor for the bacteriophage T2.
Probab=97.84 E-value=0.00063 Score=40.08 Aligned_cols=146 Identities=14% Similarity=0.109 Sum_probs=79.4
Q ss_pred CCEEEEEEEEEEEEC-CEEEEEE----EEEEE------ECCCC---------CCCCCCCCCEEEEEEEEEEEEEEC-CEE
Q ss_conf 550479988655445-7799999----88674------04777---------643231010036798999863314-403
Q gi|254781078|r 86 PNGLGIELGHNIQLE-DFVFGIN----CHTTA------AKDDS---------TFYRLKEKYFIYGDVVLKAGYSVD-SLL 144 (242)
Q Consensus 86 ~~g~G~~~GYN~Q~~-~~V~GvE----~d~~~------~~~~~---------~~~~~~~k~~~~Gsvr~r~Gya~~-~~l 144 (242)
T Consensus 195 ~~g~G~~~G~~~~~~~~~~~G~sYrS~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~~g~~~~~~~~~~ 274 (415)
T pfam03349 195 AWGVGWNLGVLYEPTDNTRIGASYRSKVKLDLKGKYTLSAVSGAAGNLAYGGSPLSGELRIQLPASLELGISHQFNDQWA 274 (415)
T ss_pred EEEEEEEEEEEEECCCCCEEEEEEECCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCEE
T ss_conf 69840899999980899889999943127998521435505654443456776644258735891899999998489889
Q ss_pred EEEEEEEEEEEEECCCCCCC-----CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCEEECCCCC
Q ss_conf 44440114575301100023-----6666555543455653037987316673278768888988874487300036666
Q gi|254781078|r 145 IYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219 (242)
Q Consensus 145 ~Y~~gG~A~~~~~~~~~~~~-----~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d~g~~~~~~~~~~ 219 (242)
T Consensus 275 l~~d~--~~--~~WS~~~~l~~~~~~~~~~~~~~~~~~~w~d~~~~~~G~eY~~~~~l~LRaG~~yd~s---pv~~~~-- 345 (415)
T pfam03349 275 VHASV--KR--TFWSDFDKLIFVLFVFAKGGTDLSLPQNYRDTTTYALGTDYQFNDRWTLRAGYAYDQS---ATPAES-- 345 (415)
T ss_pred EEEEE--EE--EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEEEECCC---CCCCCC--
T ss_conf 99999--99--8730000102234455677645346768415008987899985998699974765467---878776--
Q ss_pred CCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 66442201234138999886209
Q gi|254781078|r 220 SDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 220 ~~~~~~~~~~~~h~v~~GinY~F 242 (242)
T Consensus 346 --~~~~~Pd~dr~~~s~G~~y~~ 366 (415)
T pfam03349 346 --RSARIPDTDRTWLSLGATYAF 366 (415)
T ss_pred --CCEECCCCCCEEEEEEEEEEC
T ss_conf --360045778669994058985