HHsearch alignment for GI: 254781078 and conserved domain: pfam03922
>pfam03922 OmpW OmpW family. This family includes outer membrane protein W (OmpW) proteins from a variety of bacterial species. This protein may form the receptor for S4 colicins in E. coli.
Probab=98.91 E-value=2.5e-07 Score=58.73 Aligned_cols=104 Identities=15% Similarity=0.186 Sum_probs=71.9
Q ss_pred EEEEEEEE--EECCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEC
Q ss_conf 98999863--3144034444011457530110002366665555434556530379873166732787688889888744
Q gi|254781078|r 131 DVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208 (242)
Q Consensus 131 svr~r~Gy--a~~~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d~ 208 (242)
T Consensus 84 tlt~qYhf~~~~~~~rPYVGaGvnYt~f~~~~~~~~-----~~~~~~~-d~s~G~a~q~G~dy~l~~~w~~n~dv~~~~i 157 (189)
T pfam03922 84 TLTAQYHFGDASSGFRPYVGAGVNYTTFFDEKLGST-----GATDLKL-KDSWGAAGQAGVDYMVNDDWLVNMDVWYMFI 157 (189)
T ss_pred EEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCCCC-----CCCEEEE-CCCEEEEEEEEEEEEECCCEEEEEEEEEEEC
T ss_conf 999999348999965056760168999983445888-----8546897-0654089999889996898399999999962
Q ss_pred CCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 8730003666666442201234138999886209
Q gi|254781078|r 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 209 g~~~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F 242 (242)
T Consensus 158 ~t~at~~~g~--~~~~~~v~lDP~v~~~gvgyrF 189 (189)
T pfam03922 158 DTTASYKLGG--AKLKTKVKLDPWVFSIGLGYRF 189 (189)
T ss_pred CCEEEEECCC--CEEEEEEEECCEEEEEEEEEEC
T ss_conf 4569997288--5078579958889998769879