HHsearch alignment for GI: 254781078 and conserved domain: pfam06629

>pfam06629 MipA MltA-interacting protein MipA. This family consists of several bacterial MltA-interacting protein (MipA) like sequences. As well as interacting with the membrane-bound lytic transglycosylase MltA, MipA is known to bind to PBP1B, a bifunctional murein transglycosylase/transpeptidase. MipA is considered to be a structural protein mediating the assembly of MltA to PBP1B into a complex.
Probab=97.49  E-value=0.0056  Score=34.91  Aligned_cols=136  Identities=18%  Similarity=0.102  Sum_probs=77.6

Q ss_pred             EEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEC-CEEEEEEEEEEEEEEECCCCCCCCC--
Q ss_conf             7998865544577999998867404777643231010036798999863314-4034444011457530110002366--
Q gi|254781078|r   90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVES--  166 (242)
Q Consensus        90 G~~~GYN~Q~~~~V~GvE~d~~~~~~~~~~~~~~~k~~~~Gsvr~r~Gya~~-~~l~Y~~gG~A~~~~~~~~~~~~~~--  166 (242)
T Consensus        86 ~~G~~~~~~~~~~~~~~~~~~dv~~~~---------~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~y~~yyyGV~~~  156 (226)
T pfam06629        86 VGGLKAAYDTGWGTVRAELEQDISNGS---------RGFVADIGLAATYDLGDRLSLSPSLGLSYASRKYNDYYFGVSAA  156 (226)
T ss_pred             EEEEEEEEECCCEEEEEEEEEECCCCC---------CCEEEEEEEEEEEECCCCEEEEEEEEEEECCHHHHHHHHCCCHH
T ss_conf             217899999488899999999324673---------88999999999996399779999789998677675655377978


Q ss_pred             CCCCC--CCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf             66555--54345565303798731667327876888898887448730003666666442201234138999886209
Q gi|254781078|r  167 DNSKN--AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF  242 (242)
Q Consensus       167 ~~~~~--~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d~g~~~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F  242 (242)
T Consensus       157 ea~~s~~~~Y~a~~g~~~~~~~~~~~y~l~~~w~~~~~~~~~~L~~~~~dSP-----i--v~~~-~~~~~~~g~~Y~F  226 (226)
T pfam06629       157 ESARSGLAQYNAGAGLWSAGLGLSATYMLTDHWSALGSASYTRLSGDAADSP-----I--VERR-GQPSAGLGVAYRF  226 (226)
T ss_pred             HHHHCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCCCHHCCC-----C--EEEC-CCEEEEEEEEEEC
T ss_conf             9612378640578770789999999999669999999999998488211499-----5--8867-8789999999989