HHsearch alignment of GI: 254781078 and MMDB domain: 2jmm_A_
>2jmm_A (A:) Outer membrane protein A; NMR {Escherichia coli}
Probab=99.76 E-value=5.4e-17 Score=111.26 Aligned_cols=146 Identities=17% Similarity=0.053 Sum_probs=103.9
Q ss_pred EEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEE
Q ss_conf 00057444644103322214555666667667550479988655445779999988674047776432310100367989
Q gi|254781078|r 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV 133 (242)
Q Consensus 54 WtG~YiG~~~G~~~~~~~~~d~~~~~~~n~~~~~g~G~~~GYN~Q~~~~V~GvE~d~~~~~~~~~~~~~~~k~~~~Gsvr 133 (242)
.+++|||+++|+.+...+ ...++|+.+|| ++.+. +++|+.+.+........... ...+.
T Consensus 4 ~~~~yig~~~g~~~~~~~-------------~~~~~g~~~gy--~~~~~-~~~e~~~~~~~~~~~~~~~~-----~~~~~ 62 (156)
T 2jmm_A 4 DNTWYTGAKLGWSQYSRE-------------NQLGAGAFGGY--QVNPY-VGFEMGYDWLGRMPRKAQGV-----QLTAK 62 (156)
T ss_dssp SSEEEEEEEEEEETTCCS-------------SCCEEEEEEEE--ECSSS-EEEEEEEEEECSSSSCEEEE-----EEEEE
T ss_pred CCCEEEEEECCCEEECCC-------------CCCEEEEEEEE--EECCC-EEEEEEEEECCCCCEEEECC-----EEEEE
T ss_conf 796879787121214378-------------98587899988--70787-89999788346664154232-----15467
Q ss_pred EEEEEEE-CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCE
Q ss_conf 9986331-440344440114575301100023666655554345565303798731667327876888898887448730
Q gi|254781078|r 134 LKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212 (242)
Q Consensus 134 ~r~Gya~-~~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d~g~~~ 212 (242)
++.-+.. +++.||+++|+++.+.+.+.. ........+.+.+++.+|+|++|.++++|++++||||+..
T Consensus 63 ~~~~~~~~~~~~~y~~~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~G~~y~l~~~~~l~~e~~~~~~---- 131 (156)
T 2jmm_A 63 LGYPKLGTDDLDIYTRLGGMVWRADTSDK-------DGNGYISAAEASVSPVFAGGVEYVIRRRITPEIATRLEYQ---- 131 (156)
T ss_dssp EEECTTCTTTCEEEEEEEEEEESSBCCCC-------CSSSCCCCCBCCCCEEEEEEEEEECSSSCSSSEEEEEEEE----
T ss_pred EEEEECCCCCEEEEEEEEEEEEEEEEEEC-------CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEE----
T ss_conf 89997036854298983146998344320-------3677433366762877998999986426473437999999----
Q ss_pred EECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 003666666442201234138999886209
Q gi|254781078|r 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~h~v~~GinY~F 242 (242)
..+.+.+.+.+++||+|+|
T Consensus 132 -----------~~d~~~~~~~~~~Gl~Y~F 150 (156)
T 2jmm_A 132 -----------WTNNASDNGMLSLGVSYRF 150 (156)
T ss_dssp -----------EESSSSCEEEEEEEEEEES
T ss_pred -----------EECCCCCCCEEEEEEEEEC
T ss_conf -----------8268887777999899998