HHsearch alignment of GI: 254781078 and MMDB domain: 2k0l_A_

>2k0l_A (A:) Outer membrane protein A; OMPA, trosy, sidechain, DHPC micelles; NMR {Klebsiella pneumoniae}
Probab=96.87  E-value=0.0086  Score=33.52  Aligned_cols=133  Identities=8%  Similarity=-0.054  Sum_probs=56.1

Q ss_pred             HHHHCCCCEEEEEEECCCCCCCCCCCCCEEEECCC----CCCEEEEEEEEEEEEEEEEEE---EC-------CCCCCCCC
Q ss_conf             98743652023433202543457532110330376----653000057444644103322---21-------45556666
Q gi|254781078|r   15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD----EYGIWSGNYVGLHISRLYETH---PL-------ADTINRKT   80 (242)
Q Consensus        15 ~~~~~~~~~~a~d~~~~~~~~~~~~~~~~~~~~~~----~~~~WtG~YiG~~~G~~~~~~---~~-------~d~~~~~~   80 (242)
                      +++++...+++.+.+.-.-.+...+......-.++    ....=+++.+|+.+|+-+...   ++       .+......
T Consensus         6 ~~~~~~a~~~~~~~yig~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gY~~~~~~~ve~~~~~~~~~~~~~~~~   85 (216)
T 2k0l_A            6 AIFVLNAAPKDNTWYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGYQVNPYLGFEMGYDWLGRMAYKGSVD   85 (216)
T ss_dssp             SSCCSSSCSCCCCEEEEEEEECSCCCCSCCCCCSCCCSCCCSCCCCCEEEEEEEEEEETTEEEEEEEEECCCCCCCCSSC
T ss_pred             HHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCC
T ss_conf             43655077877989999998218860664325665456641037866899999978514443486146504201222245


Q ss_pred             CCCCCCCEEEEEEEEEEEEC-CEEE--EEEEEEEEECCCCCC-----CCCCCCCEEEEEEEEEEEEEEC-CEEEEE
Q ss_conf             67667550479988655445-7799--999886740477764-----3231010036798999863314-403444
Q gi|254781078|r   81 YNSLLPNGLGIELGHNIQLE-DFVF--GINCHTTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVD-SLLIYG  147 (242)
Q Consensus        81 ~n~~~~~g~G~~~GYN~Q~~-~~V~--GvE~d~~~~~~~~~~-----~~~~~k~~~~Gsvr~r~Gya~~-~~l~Y~  147 (242)
                      .....-..+.+.++|.+.+. .+-+  ++-..+...+.+...     .....+..+...+-+-+.|.+. ++.+.+
T Consensus        86 ~~~~~~~~~~~~~~y~~~~~~~~~~y~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~y~l~~~~~l~~  161 (216)
T 2k0l_A           86 NGAFKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATRL  161 (216)
T ss_dssp             CCSSCCCEEEEEEEEEEESSSSEEEEEEEEEEEEECCCCCSCCCSSSCCCCCCEEEEEEEEEEEEEECSSSCEEEE
T ss_pred             CCCEEEEEEEEEEEEEEEEECCCEEEEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCEECCEEEEEECCCEEEEE
T ss_conf             7626888788999999862024117777447898601112014576321134563031351237998369979999