HHsearch results for GI: 254781078 and protein with PDBid: 1qjp_A
>1qjp_A Outer membrane protein A; HET: C8E; 1.65A {Escherichia coli} SCOP: f.4.1.1 PDB: 1bxw_A* 1g90_A 2ge4_A
Probab=99.82 E-value=1.7e-18 Score=118.58 Aligned_cols=161 Identities=18% Similarity=0.124 Sum_probs=104.3
Q ss_pred EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCC---CCCCCCCEEEEEE
Q ss_conf 0574446441033222145556666676675504799886554457799999886740477764---3231010036798
Q gi|254781078|r 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF---YRLKEKYFIYGDV 132 (242)
Q Consensus 56 G~YiG~~~G~~~~~~~~~d~~~~~~~n~~~~~g~G~~~GYN~Q~~~~V~GvE~d~~~~~~~~~~---~~~~~k~~~~Gsv 132 (242)
.||||+++|++..... ... .......-...++++++||+++- . +++|+.+.+.+..... ...+.+.+ .-.+
T Consensus 6 ~wYvG~~~G~~~~~~~-~~~-~~~~~~~~~~~~~g~~~GY~f~~-~--~~~E~~y~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (171)
T 1qjp_A 6 TWYTGAKLGWSQYHDT-GFI-NNNGPTHENKLGAGAFGGYQVNP-Y--VGFEMGYDWLGRMPYKGSVENGAYKAQ-GVQL 79 (171)
T ss_dssp EEEEEEEEEEEC---------------CCCEEEEEEEEEEEEET-T--EEEEEEEEEEEECCC-------CEEEE-EEEE
T ss_pred CEEEEEEECCEEECCC-CCC-CCCCCCCCCCEEEEEEEEEEECC-C--EEEEEEEEECCCCCCCCCCCCCEEEEE-EEEE
T ss_conf 7999998601995265-444-77764457872689999886363-0--999999986586311044544406888-8889
Q ss_pred EEEEEEEEC-CEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCC
Q ss_conf 999863314-4034444011457530110002366665555434556530379873166732787688889888744873
Q gi|254781078|r 133 VLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211 (242)
Q Consensus 133 r~r~Gya~~-~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d~g~~ 211 (242)
.+|..|.+. ++.||+++|+++.+.+.+. ......+.+..++.+|+|+||.|+++|++++||||++....
T Consensus 80 ~~~~~~~~~~~~~~y~~~G~~~~~~~~~~----------~~~~~~~~~~~~~~~g~G~~y~~~~~~~l~~~y~y~~~~~~ 149 (171)
T 1qjp_A 80 TAKLGYPITDDLDIYTRLGGMVWRADTYS----------NVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGD 149 (171)
T ss_dssp EEEEEEESSSSEEEEEEEEEEEEEEEEEC----------SSSCEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEC----
T ss_pred EEEEEEECCCCEEEEEECCEEEEEEEEEE----------CCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCC
T ss_conf 77899942786149895023899747511----------03663056743458981699992699899999999971587
Q ss_pred EEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 0003666666442201234138999886209
Q gi|254781078|r 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242 (242)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F 242 (242)
......+.+.|.+++||+|||
T Consensus 150 ----------~~~~~~~~~~~~~~lG~~y~F 170 (171)
T 1qjp_A 150 ----------AHTIGTRPDNGMLSLGVSYRF 170 (171)
T ss_dssp --------------------CEEEEEEEEEC
T ss_pred ----------CCCCCCCCCCCEEEEEEEEEC
T ss_conf ----------655442100458999999988