HHsearch results for GI: 254781078 and protein with PDBid: 1qjp_A

>1qjp_A Outer membrane protein A; HET: C8E; 1.65A {Escherichia coli} SCOP: f.4.1.1 PDB: 1bxw_A* 1g90_A 2ge4_A
Probab=99.82  E-value=1.7e-18  Score=118.58  Aligned_cols=161  Identities=18%  Similarity=0.124  Sum_probs=104.3

Q ss_pred             EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCC---CCCCCCCEEEEEE
Q ss_conf             0574446441033222145556666676675504799886554457799999886740477764---3231010036798
Q gi|254781078|r   56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF---YRLKEKYFIYGDV  132 (242)
Q Consensus        56 G~YiG~~~G~~~~~~~~~d~~~~~~~n~~~~~g~G~~~GYN~Q~~~~V~GvE~d~~~~~~~~~~---~~~~~k~~~~Gsv  132 (242)
                      .||||+++|++..... ... .......-...++++++||+++- .  +++|+.+.+.+.....   ...+.+.+ .-.+
T Consensus         6 ~wYvG~~~G~~~~~~~-~~~-~~~~~~~~~~~~~g~~~GY~f~~-~--~~~E~~y~~~~~~~~~~~~~~~~~~~~-~~~~   79 (171)
T 1qjp_A            6 TWYTGAKLGWSQYHDT-GFI-NNNGPTHENKLGAGAFGGYQVNP-Y--VGFEMGYDWLGRMPYKGSVENGAYKAQ-GVQL   79 (171)
T ss_dssp             EEEEEEEEEEEC---------------CCCEEEEEEEEEEEEET-T--EEEEEEEEEEEECCC-------CEEEE-EEEE
T ss_pred             CEEEEEEECCEEECCC-CCC-CCCCCCCCCCEEEEEEEEEEECC-C--EEEEEEEEECCCCCCCCCCCCCEEEEE-EEEE
T ss_conf             7999998601995265-444-77764457872689999886363-0--999999986586311044544406888-8889


Q ss_pred             EEEEEEEEC-CEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCC
Q ss_conf             999863314-4034444011457530110002366665555434556530379873166732787688889888744873
Q gi|254781078|r  133 VLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH  211 (242)
Q Consensus       133 r~r~Gya~~-~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d~g~~  211 (242)
                      .+|..|.+. ++.||+++|+++.+.+.+.          ......+.+..++.+|+|+||.|+++|++++||||++....
T Consensus        80 ~~~~~~~~~~~~~~y~~~G~~~~~~~~~~----------~~~~~~~~~~~~~~~g~G~~y~~~~~~~l~~~y~y~~~~~~  149 (171)
T 1qjp_A           80 TAKLGYPITDDLDIYTRLGGMVWRADTYS----------NVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGD  149 (171)
T ss_dssp             EEEEEEESSSSEEEEEEEEEEEEEEEEEC----------SSSCEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEC----
T ss_pred             EEEEEEECCCCEEEEEECCEEEEEEEEEE----------CCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCC
T ss_conf             77899942786149895023899747511----------03663056743458981699992699899999999971587


Q ss_pred             EEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf             0003666666442201234138999886209
Q gi|254781078|r  212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF  242 (242)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F  242 (242)
                                ......+.+.|.+++||+|||
T Consensus       150 ----------~~~~~~~~~~~~~~lG~~y~F  170 (171)
T 1qjp_A          150 ----------AHTIGTRPDNGMLSLGVSYRF  170 (171)
T ss_dssp             --------------------CEEEEEEEEEC
T ss_pred             ----------CCCCCCCCCCCEEEEEEEEEC
T ss_conf             ----------655442100458999999988