HHsearch results for GI: 254781078 and protein with PDBid: 2k0l_A

>2k0l_A Outer membrane protein A; OMPA, trosy, sidechain, DHPC micelles; NMR {Klebsiella pneumoniae}
Probab=99.87  E-value=2.2e-20  Score=129.02  Aligned_cols=171  Identities=18%  Similarity=0.103  Sum_probs=110.4

Q ss_pred             EEEEEEEEEEEEEEEEEECCCCC---CCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCC-CCCCCCCEE-
Q ss_conf             00057444644103322214555---6666676675504799886554457799999886740477764-323101003-
Q gi|254781078|r   54 WSGNYVGLHISRLYETHPLADTI---NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF-YRLKEKYFI-  128 (242)
Q Consensus        54 WtG~YiG~~~G~~~~~~~~~d~~---~~~~~n~~~~~g~G~~~GYN~Q~~~~V~GvE~d~~~~~~~~~~-~~~~~k~~~-  128 (242)
                      ...||||+++|+++.........   ......+....++|+++||  |+.++ +++|+.+.+.+..... .....+... 
T Consensus        16 ~~~fYiG~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~GY--~f~~~-~~~E~~y~~~~~~~~~~~~~~~~~~~~   92 (216)
T 2k0l_A           16 DNTWYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDWLGRMAYKGSVDNGAFKAQ   92 (216)
T ss_dssp             CCCEEEEEEEECSCCCCSCCCCCSCCCSCCCSCCCCCEEEEEEEE--EEETT-EEEEEEEEECCCCCCCCSSCCCSSCCC
T ss_pred             CCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEE--EECCC-CEEEEEEEECCCEEEECCCCCCCEEEE
T ss_conf             798999999710886066543566545555313786689999998--94134-107971576484012036776515877


Q ss_pred             EEEEEEEEEEEE-CCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf             679899986331-4403444401145753011000236666555543455653037987316673278768888988874
Q gi|254781078|r  129 YGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP  207 (242)
Q Consensus       129 ~Gsvr~r~Gya~-~~~l~Y~~gG~A~~~~~~~~~~~~~~~~~~~~~~~~d~t~~G~tvGaGVEYait~nwslraEY~Y~d  207 (242)
                      .-++..+..|.+ ..+.+|+++|+++...+.......     .....+.+.+.++|.+|+|+||+|++||++++||||++
T Consensus        93 ~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~G~G~~y~l~~~~s~~~ey~y~~  167 (216)
T 2k0l_A           93 GVQLTAKLGYPITDDLDIYTRLGGMVWRADSKGNYAS-----TGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWVN  167 (216)
T ss_dssp             EEEEEEEEEEESSSSEEEEEEEEEEEEECCCCCSCCC-----SSSCCCCCCEEEEEEEEEEEEEECSSSCEEEEEESSCS
T ss_pred             EEEEEEEEEEEEECCEEEEEEEEEEEEEECCCCCCCC-----CCCCCCCCCCCCCCEECCEEEEEECCCEEEEEEEEEEE
T ss_conf             7899999988510230254100036775101100035-----66443223564131042227997079979999999996


Q ss_pred             CCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf             48730003666666442201234138999886209
Q gi|254781078|r  208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF  242 (242)
Q Consensus       208 ~g~~~~~~~~~~~~~~~~~~~~~~h~v~~GinY~F  242 (242)
                      ...          +......+.+.+++++||+|||
T Consensus       168 ~~~----------~~~~~~~~~d~~~~~~Gv~Y~F  192 (216)
T 2k0l_A          168 NIG----------DAGTVGTRPDNGMLSLGVSYRF  192 (216)
T ss_dssp             SCC----------CCSCCCCSSCSCCCEEEEEEEC
T ss_pred             CCC----------CCCCCCCCCCCCEEEEEEEEEC
T ss_conf             468----------7655452222678999999999