HHSEARCH alignment of GI: 254781078 and SCOP domain: d2fgqx1

Alignment
>d2fgqx1 f.4.3.1 (X:3-332) Porin {Comamonas acidovorans [TaxId: 80866]}
Probab=97.54  E-value=0.0016  Score=35.32  Aligned_cols=61  Identities=11%  Similarity=0.099  Sum_probs=43.4

Q ss_pred             EEEEEEEEEEECCCCEEEEEEEEEEECCCCEE-ECCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf             37987316673278768888988874487300-03666666442201234138999886209
Q gi|254781078|r  182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSV-NNSNAKSDVERVDRKGNAHIASLGINMHF  242 (242)
Q Consensus       182 G~tvGaGVEYait~nwslraEY~Y~d~g~~~~-~~~~~~~~~~~~~~~~~~h~v~~GinY~F  242 (242)
                      .-.+..|++|.|+++.++-+||-|++....+. ..........++....+...+.+||.++|
T Consensus       269 ~~~~~lg~~Y~lSKrT~lYa~~~y~~n~~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~rh~F  330 (330)
T d2fgqx1         269 AHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF  330 (330)
T ss_dssp             EEEEEEEEEEESSSSEEEEEEEEEEEECTTCCCCCCBTTTBCSCCCTTCEEEEEEEEEEEEC
T ss_pred             CEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEEC
T ss_conf             24999999997567618744206511258774210111001578789987599999989989


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane beta-barrels
superfamily: Porins
family: Porin
domain: Porin
species: Comamonas acidovorans [TaxId: 80866]