BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781078|ref|YP_003065491.1| hypothetical protein
CLIBASIA_04900 [Candidatus Liberibacter asiaticus str. psy62]
(242 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254781078|ref|YP_003065491.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040755|gb|ACT57551.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG
Sbjct: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY
Sbjct: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG
Sbjct: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM
Sbjct: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
Query: 241 HF 242
HF
Sbjct: 241 HF 242
>gi|315122463|ref|YP_004062952.1| hypothetical protein CKC_03575 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495865|gb|ADR52464.1| hypothetical protein CKC_03575 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 294
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 134/217 (61%), Gaps = 11/217 (5%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN 96
F+ NN+EY DDEYGIW G +VG++ S + K +S +GI+ G++
Sbjct: 77 FDNRCNNIEYLDDEYGIWEGIHVGINFSSQHYNQAFYYEPYNKAKSSFNKYKVGIDTGYD 136
Query: 97 IQLEDFVFGINCHTTAAK----------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ EDFV+G+ + +K D + F+R+K Y IYGD + +AGYSVDS+L+Y
Sbjct: 137 LHTEDFVYGLRFSSNFSKGLEANAKLSSDQALFHRMKAGYSIYGDALFRAGYSVDSVLVY 196
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G+GG GG Y+ +S+L+K++ + S N +F G+G +VLG+G+DYM+ +IS++ SYRY
Sbjct: 197 GLGGLGGTYIGNSTLQKIDKEGSGNHATKFSGYGVGIVLGVGVDYMIWDNISVTTSYRYA 256
Query: 207 PHHIHSVN-NSNAKSDVERVDRKGNAHIASLGINMHF 242
PH I N + +A ++ ++ NAHI SLG++MH
Sbjct: 257 PHSIRFNNISKDASETIKEINGTSNAHIISLGLSMHL 293
>gi|170750202|ref|YP_001756462.1| carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
gi|170656724|gb|ACB25779.1| Carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
Length = 708
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 88/232 (37%), Gaps = 50/232 (21%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS------ 64
V+ ++ P + A DL+ PR Q Y WSG YVGL S
Sbjct: 14 LVLTAPLLAPVAARAADLFAPRPT-----------AQAPAYTDWSGGYVGLEGSAGGSYG 62
Query: 65 -----------RLYETHPLADTINR--KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
R D+ R + N+ G G+ G N Q +V+GI
Sbjct: 63 AYSFGPTTIGGRPVPPFKSGDSTGRSDQGKNATTATG-GLFGGWNWQAGPWVYGIEASLD 121
Query: 112 AAK--------------DDST--FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
AA D+T F ++ K +YG + + GYS D LIYG G GA
Sbjct: 122 AANLKRPVPSTIAGFGYADTTPAFNIVRAKTDLYGALRARLGYSFDRYLIYGTFGLAGAN 181
Query: 156 V-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
I ++ +++ A+ D G LG G+ Y + ++L YRYI
Sbjct: 182 ARILANYPDLDAGGQTAARRDLDYVG--FTLGAGVQYAITDSLALGIDYRYI 231
>gi|90422419|ref|YP_530789.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
gi|90104433|gb|ABD86470.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
Length = 207
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 29/191 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ + D N T P+G+ G++ G+N Q FV+G+
Sbjct: 44 WAGPYLGGNLG-----YAWGDVHNSAT----EPSGVAGGVQAGYNWQSGQFVYGLEGDIA 94
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D TF K +G V +AGYS D+LL+Y GG A+ +S++S N
Sbjct: 95 ITGADDTFASWKFSNPWFGTVRGRAGYSFDNLLVYATGGL--AFGELKGERFGQSNSSTN 152
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A +G G ++ +N + S Y Y+ + SN + V
Sbjct: 153 A---------GWTIGAGAEFGLNQNWSAKVEYLYV-----DLGGSNFS--ITGVQNSYQF 196
Query: 232 HIASLGINMHF 242
I +G+N HF
Sbjct: 197 GILRVGVNYHF 207
>gi|312113967|ref|YP_004011563.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311219096|gb|ADP70464.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 294
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 45/196 (22%)
Query: 53 IWSGNYVGLHIS----------RLYETHPLADTINRKTYNSLLP-NGL--GIELGHNIQL 99
+W+G YVG H+ Y P + T +R YN L G+ G+ +G+N Q
Sbjct: 42 LWTGFYVGAHLGGGWTDFDLGRNSYYYWPTSTTYDRYDYNGGLSGTGIFGGLTIGYNWQF 101
Query: 100 E---DFVFGINCHTTAAKDD------------------STFYRLKEKYFIYGDVVLKAGY 138
++V+GI +DD ST R K YGD+ + GY
Sbjct: 102 GQCCNYVYGIELDIGGWRDDASKTIYIDDDRRGLDPDASTRIRFTNKGGFYGDITGRIGY 161
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS--------VVLGIGLD 190
+ + LIY GGF A++ +S V +N +D ++ +G GL+
Sbjct: 162 AAGNTLIYAKGGF--AWLNNSFRVGVLRENGATGY-NYDWSSTTDNGNTLAGWTVGGGLE 218
Query: 191 YMVNYDISLSASYRYI 206
Y NY+ S+ A Y Y
Sbjct: 219 YKWNYNWSVKAEYLYF 234
>gi|312114546|ref|YP_004012142.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219675|gb|ADP71043.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 250
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG- 174
DS Y+ K +G V + GY++DS L+Y GGF + +++D G
Sbjct: 116 DSATYKYSSKVDWFGTVRGRLGYAIDSALVYATGGF--------AYGGIKNDYDARHLGA 167
Query: 175 ---RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAK--SDVERVDRK 228
+FDG+ + V+G G++Y + SL A Y+YI + V+ S + +D+E +
Sbjct: 168 GEFKFDGNATGYVVGGGVEYKLAPAWSLKAEYQYINLGKNNPVDTSTGQHYTDLEGTKLE 227
Query: 229 GNA-HIASLGINMHF 242
+A H +G+N HF
Sbjct: 228 DDAFHTVRVGLNYHF 242
>gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 205
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 79/195 (40%), Gaps = 28/195 (14%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+ IVV LA L P AD + Y D WSG YVG+H + P
Sbjct: 5 VKIVVTAAGLAFCLLGPAM-----AADLSPTYNDPPAFQWSGAYVGVHGGTAFTGMP-NP 58
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT---AAKDDSTFYRLKEKYFIYGD 131
R ++ G++ G+N Q+ V G + A+ D ++KEK+ G
Sbjct: 59 FAGRNGFSG------GVQAGYNQQMGPTVLGAEIEGSYLGGAEHDVQGGKIKEKW--RGA 110
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
KAG S D L++G GG V + +K DN +A DG +LG G++
Sbjct: 111 AKAKAGLSFDQTLLFGTGG-----VALTKFDK--GDNVSSA----DGWKVGYLLGAGIEQ 159
Query: 192 MVNYDISLSASYRYI 206
+S Y Y+
Sbjct: 160 GFAGGLSAKVEYDYV 174
>gi|83308662|emb|CAJ01570.1| outer membrane protein [uncultured bacterium]
Length = 238
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G I + T L R + PNG+ G +G+N+Q FV G+
Sbjct: 40 WAGLYLGGQIGYGWGTDTLT-VFPRGFGTNFTPNGVVGGAHIGYNLQFNQFVAGLEGDVE 98
Query: 112 AAKDDSTFYR----LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
DS+F + + G + + G + D L+Y GG E +
Sbjct: 99 GTSIDSSFSPGGVLYSTRIPVQGSIRGRVGVAFDRALLYATGG----------AEFAGFN 148
Query: 168 NSKNAKGRFDGHGSS---VVLGIGLDYMVNYDISLSASYRY 205
S+N FD + ++ +G G++Y V + S+ A YRY
Sbjct: 149 TSENGFPGFDQNSTTRTGWTVGGGIEYAVTGNWSIRAEYRY 189
>gi|312113068|ref|YP_004010664.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
gi|311218197|gb|ADP69565.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
Length = 260
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 53 IWSGNYVGLHISRLYETHPLADTI---NRKTY----NSLLPNGL--GIELGHNIQLEDFV 103
+W G Y+G +I + T A + N T S+ +G G++LG+NI + +F+
Sbjct: 52 LWQGFYIGGNIGGAWSTIETASNVVFVNGATTVLSDRSVEGSGFLGGLQLGYNIPIGNFL 111
Query: 104 FGINCHTTAAKDDST-----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+GI +D++ + YGDV ++ G+ + LIY GGF
Sbjct: 112 WGIEGDLGGLGNDASKSFAVGGVLPSVLTVSSDGGWYGDVTVRGGFLYGNALIYLKGGF- 170
Query: 153 GAYVIDSSLEKVESDNS--KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G Y ++++ V + S + + G F G LG GL+Y V+ S+ A Y Y
Sbjct: 171 GFYTGETNVTLVTDNISALRQSSGTFTGW----TLGGGLEYQVSPRWSIKAEYLYFDFGD 226
Query: 211 HSVN 214
++N
Sbjct: 227 STLN 230
>gi|110632458|ref|YP_672666.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110283442|gb|ABG61501.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 237
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 25/131 (19%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLK-------------- 135
GI++G++ Q+ ++V G A +T Y +K Y++ G + K
Sbjct: 86 GIQVGYDWQVNNWVLG-----AVADIAATNYEVKNSYYVLGTRIAKDSSKLSYLGTVRAR 140
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
AGY+ D L+YG GGF +S + + +D K ++ R + +G G++Y V
Sbjct: 141 AGYAWDRTLVYGHGGFAYGKTKQTS-DFIGTDTLKQSQTR-----TGWTIGAGVEYAVTD 194
Query: 196 DISLSASYRYI 206
ISL + Y Y+
Sbjct: 195 RISLGSEYSYV 205
>gi|27382580|ref|NP_774109.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355752|dbj|BAC52734.1| bll7469 [Bradyrhizobium japonicum USDA 110]
Length = 208
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 29/191 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G +I YE + + N P+G GI+ G+N Q +VFG+
Sbjct: 45 WAGPYLGGNIG--YEWGSVDN-------NPSKPSGFVGGIQAGYNFQNGPWVFGVEGDIQ 95
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
AA D TF K +G + + GY+ ++L YG G + + ES S
Sbjct: 96 AAGADDTFAPWKFSNPWFGTLRGRVGYAFSNVLFYGTAGLAFGELRAQTFGWTESHTS-- 153
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G G + + + S Y YI + S ++ + V A
Sbjct: 154 ---------AGWTIGAGAEVGLAPNWSAKLEYLYI-------DLSTSQFAITGVSNGYTA 197
Query: 232 HIASLGINMHF 242
+ G+N HF
Sbjct: 198 SVVRAGVNYHF 208
>gi|319783214|ref|YP_004142690.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169102|gb|ADV12640.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 221
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI----QLEDFVFGINCH 109
W+G Y GL + + ++ S+ P+ G +G ++ Q + V G
Sbjct: 37 WTGYYAGLQAGYGWGQSDI--SVTEGAPFSIAPDIDGGFVGGHVAGLWQFDQAVLGAEAD 94
Query: 110 --------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
TT + STF K+F G V KAGY++D LL+YG+GG A + S +
Sbjct: 95 LNYSSVGGTTVSALGSTF-GTDIKWF--GSVNAKAGYAMDRLLVYGIGGVAFAGIETSQV 151
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI---PHHIHSVNNSNA 218
D+++ G +G G+DY + + A YRY H N
Sbjct: 152 AGPAFDSTRTNVGW--------TVGAGVDYALTDKFVVGAQYRYYDFGSEHYEVAEPFN- 202
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
DR N + ++GIN+ +
Sbjct: 203 -------DRDQNVKLNTVGINLSY 219
>gi|312113917|ref|YP_004011513.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
gi|311219046|gb|ADP70414.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
Length = 292
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 61/241 (25%)
Query: 17 IVVPNHSLAVDLYLPR---KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+V N +LA DLY K F EA +W G Y+G H+ + +
Sbjct: 1 MVAGNSALAADLYGRGGGLKDGPFYEAP----------ALWQGFYLGGHVGAAWSKADVD 50
Query: 74 DT---INRKTYNSLLPNGL---GIELGHNIQLEDFVFGIN-----CHTTAAKD------- 115
DT + TY L G +LG+N Q +FVFG+ A+KD
Sbjct: 51 DTFIYVGDPTYKGDLNTTSLTGGGQLGYNFQRGNFVFGVEGDIGYLKVDASKDVAFRPTS 110
Query: 116 --------------DSTFYRLKEKYF----IYGDVVLKAGYSVDSLLIYGMGGFG----- 152
D + KY +YGD+ + GY+ D L Y GG
Sbjct: 111 CVGTYTSAPYTVNYDPKMCAVDTKYSASGDLYGDITGRLGYAFDRTLFYAKGGVAFLNGE 170
Query: 153 -GAYVIDSSLEKVESDNS--KNAKGRFD-GHGSSVV---LGIGLDYMVNYDISLSASYRY 205
A + + + SD+ NA +FD H ++V +G+G++Y + SL A Y++
Sbjct: 171 FDAKYLGQNCASLGSDSHCLGNALSKFDYSHSETLVGWTIGVGVEYKLTPSWSLKAEYQH 230
Query: 206 I 206
Sbjct: 231 F 231
>gi|92118614|ref|YP_578343.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
gi|91801508|gb|ABE63883.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
Length = 206
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ Y + ++ + PNG+ G++ G+N Q VFG+
Sbjct: 43 WAGPYLGGNLG--YAWGSVQNSATK-------PNGVFGGVQAGYNWQSGPLVFGLEGDIQ 93
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
A D F R K +G V + GY+ +++LIYG GG
Sbjct: 94 ANAADDIFARWKFSNPWFGTVRGRLGYAFNNVLIYGTGG 132
>gi|13470446|ref|NP_102014.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021187|dbj|BAB47800.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 221
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 24/198 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGINC--- 108
W+G Y GL + ++ T S NG +G + Q + V G
Sbjct: 37 WTGYYAGLQAGYGWGQSDISGTEGEPFSVSPDINGGFVGGHIAGLWQFDQAVIGAEADLN 96
Query: 109 ----HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ TA + + K+F G V KAGY++D +L+YG+GG V + +E
Sbjct: 97 YSSVNGTAEAEPGNNFGTDIKWF--GSVNAKAGYAMDRVLVYGIGG-----VAFAGIETS 149
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+S S ++ R + LG G+DY + + A YRY + S+ +
Sbjct: 150 QSAGSAFSETRAN---VGWTLGAGVDYALTDKFVVGAQYRYYDFGSEHYDGSS-----DF 201
Query: 225 VDRKGNAHIASLGINMHF 242
V R + + ++GIN+ +
Sbjct: 202 VGRDQDTKLNTVGINLSY 219
>gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 205
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 89/233 (38%), Gaps = 41/233 (17%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE--THPLAD 74
I++ +LA+ L P AD + Y D WSG YVG+H + +P A
Sbjct: 7 IILTASALAMCLLGPAM-----AADLSPAYNDPPAFQWSGAYVGVHGGTAFTGMPNPFAG 61
Query: 75 TINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT---AAKDDSTFYRLKEKYFIY 129
NGL G + G+N Q+ V G + A+ D ++KEK+
Sbjct: 62 R-----------NGLSGGFQAGYNQQMGPAVLGAEIEGSYLGGAEHDVRGGKIKEKW--R 108
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G KAG S D L++G GG ++ K + + N DG ++G G+
Sbjct: 109 GAAKAKAGLSFDQTLLFGTGGV--------AMTKFDKGDKVNG---IDGWKLGYLVGGGI 157
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +S Y Y+ ++ KS +H GIN F
Sbjct: 158 EQGFAGGLSAKVEYDYVRTPGVETTSALGKSKATI-----GSHELKAGINYRF 205
>gi|217979266|ref|YP_002363413.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
gi|217504642|gb|ACK52051.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
Length = 240
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 53 IWSGNYVGLHISRLYET--------HPLADTINRKTYNSLLPNGLG-IELGHNIQLEDFV 103
W+G Y+G + + + PL+ TI + ++ +G +G+N Q+++FV
Sbjct: 32 TWAGFYLGGQVGYGWGSDSGNVTGGFPLSPTIQTASTSTQTQGAIGGAHIGNNWQIQNFV 91
Query: 104 FG----INCHTTAAKDDSTFYRLKEKYF---IYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
G +N T + F L Y + G V + GY++D L+Y GG ++
Sbjct: 92 IGLEGDVNGTTLSKMSTPLFNNLYFPYTQSPVQGTVRGRLGYALDRTLLYATGGLAYGWI 151
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ N ++ F + +G G+++ VN + S+ A YRY
Sbjct: 152 HNDY-------NIFGSRSSFSTTKAGWTIGGGVEFAVNDNWSVRAEYRYT 194
>gi|13470965|ref|NP_102534.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021708|dbj|BAB48320.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 226
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 31/189 (16%)
Query: 54 WSGNYVGLHIS----RLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGIN 107
WSG YVG I + T+ L +T + +G G+++G+N Q+ V G+
Sbjct: 34 WSGVYVGGQIGYGFGKTDATYNLPNTPTIRGSQDYDTDGFLGGVQIGYNYQINSAVLGVE 93
Query: 108 CHTTAAK----DDSTFYRLKEKYFI----YGDVVLKAGYSVDSLLIYGMGGFGGAYV--- 156
+ A D L ++Y +G + +AGY+ D LIYG GG V
Sbjct: 94 ADVSGADIKGHSDEITSGLGDRYDTKVDWFGTLRARAGYAFDRTLIYGTGGLAFGSVENR 153
Query: 157 -IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN- 214
+D + N+K +G GL+ + S Y+Y+ +++
Sbjct: 154 YVDGPFDTFSEKNTK----------VGWTIGAGLEQAITDHWSAKFEYQYVDLRDQTIDY 203
Query: 215 --NSNAKSD 221
NSN D
Sbjct: 204 APNSNTTFD 212
>gi|91975762|ref|YP_568421.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91682218|gb|ABE38520.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 207
Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ Y + ++I + P+G G++ G+N Q + VFG+
Sbjct: 44 WAGPYLGGNLG--YSFGNVTNSITK-------PSGFNGGVQGGYNWQSGNIVFGLEGDIQ 94
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ D TF K +G + GY+++ LLIY GGF + L ES +S
Sbjct: 95 FSTADDTFAPYKFSNPWFGTARGRVGYAMNDLLIYATGGFAFGQLKGERLLSTESHSS-- 152
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ +G G ++ +S Y Y
Sbjct: 153 ---------AGWTVGAGAEFAFAPKLSAKVEYLY 177
>gi|169825359|ref|YP_001691252.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
gi|168199281|gb|ACA21227.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
Length = 583
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 32/174 (18%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED---FVFG 105
DE G +G +G RL P A + G E+G+N+Q V G
Sbjct: 61 DESG--TGRCIGPRCVRLPALSPGARAADLSA---------GSEVGYNLQASPGSGLVIG 109
Query: 106 --INCHTTAAK---------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
++ TT + D + FY L ++ +G V KAGY+ D L +YG
Sbjct: 110 AAVDYQTTRLRGYGESILVREVDENSDFAAFYHLGQRLDTFGAVRGKAGYAFDRLFVYGT 169
Query: 149 GGFGGAYV-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
GG YV ID D A+G G G G +Y ++ +S+ A
Sbjct: 170 GGLAYGYVRIDVGTALTVGDRQFAAQGLTSGFRLGYAAGGGAEYAISPHLSVKA 223
>gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840]
gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis]
gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840]
Length = 212
Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGTQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str.
9-941]
gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus
2308]
gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str.
870]
gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str.
Tulya]
gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str.
292]
gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str.
C68]
gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus]
gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus]
gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus
2308]
gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
Length = 212
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYTFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSASGWEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|148253259|ref|YP_001237844.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405432|gb|ABQ33938.1| putative outer membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 206
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGI--NCH 109
W+G Y+G + YE + + N P+GL G+ G+N Q +VFG + +
Sbjct: 43 WAGPYLGGTLG--YEWGSVGN-------NPTKPSGLVGGLTAGYNWQNGPWVFGAEGDIN 93
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T A D ++ +F G V +AGY+ +++L YG GG + + ES S
Sbjct: 94 LTGANDTFAPWKFSNPWF--GTVRGRAGYAFNNILFYGTGGLAFGGLRGETFGLSESHTS 151
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
LG G ++ + + + Y YI + + AK+D R G
Sbjct: 152 L-----------GWTLGAGAEFGLAQNWTAKIEYLYIDLDSSNFVITGAKNDY----RFG 196
Query: 230 NAHIASLGINMHF 242
+ GIN HF
Sbjct: 197 ---VVRAGINFHF 206
>gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33]
gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae]
gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33]
Length = 212
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|260466904|ref|ZP_05813087.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259029300|gb|EEW30593.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 238
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 24/207 (11%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
LA+ + P + + + AD NV D WSG Y+G + + T +++
Sbjct: 6 LAMAVITP--VGMASAADTNVVLPGDTTYNWSGAYIGAQAGYAWANARVGQTFAPGSFDD 63
Query: 84 LL----PNGL--GIELGHNIQLED-FVFGINC-HTTAAKDDSTFYRL----------KEK 125
P+G G+ G N Q + V GI ++ A D+T YR + K
Sbjct: 64 YGWGYNPSGGFGGLYAGVNHQFDSGLVLGIEADYSFAGVKDTTHYRALGVDDPAFGGELK 123
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
G + L+AGY+VD L + GG A +++ S + KG G+ L
Sbjct: 124 LDTVGSLRLRAGYAVDRWLPFVTGGLAVASYKHTTVNLPGSTPYADVKGTVAGY----TL 179
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHS 212
G G +Y V + + YR+ H+
Sbjct: 180 GAGAEYAVTDNWLVRGEYRFADFGRHT 206
>gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330]
gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330]
gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915]
gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti]
gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 212
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + V KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDF--QRFNDV-----KSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis]
gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
Length = 212
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 212
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
Length = 212
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|260460749|ref|ZP_05808999.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
gi|259033326|gb|EEW34587.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
Length = 221
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 30/236 (12%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGI-WSGNYVGLHISRLYETHPLADT 75
++V + L L +P AD V+ G W+G Y G+ + ++ T
Sbjct: 4 LIVASAGLLAALSVPAL-----AADPTVDVPMTAPGFDWTGYYAGMQAGYGWGQSDISGT 58
Query: 76 INRKTYNSLLPN-GLGIELGHNIQLEDF---VFGINCHTTAAKDDSTF-----YRLKEKY 126
S+ P+ G G GH L F V G + D T L
Sbjct: 59 GGGPF--SVSPDIGGGFVGGHVAGLWQFDQAVIGAEADLNYSSVDGTADLGAGNTLGTDV 116
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+G V KAGY+VD +L+YG+GG V + +E +S + ++ R + +G
Sbjct: 117 KWFGSVNAKAGYAVDRVLVYGIGG-----VAFAGIETSQSAGAAFSETRTN---VGWTVG 168
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+DY + + A YRY + SN + DR + + ++G+N+ +
Sbjct: 169 AGVDYALTDKFVVGAQYRYYDFGSEHFDGSNGFA-----DRDQDTKLNTVGVNLSY 219
>gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 222
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 56 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 108
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 109 EAEHRIGHGGTLQQSW--NGNAKGKVGYTFDKTLVYGTAGYG--------VTRFKAKDNT 158
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + V KS V ++++
Sbjct: 159 TSASGWEGG----VLIGAGVEQALSGPLSVKAEYDF--QRFNDV-----KSQVNGIEQRN 207
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 208 NLKNHSIKAGLNYKF 222
>gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457]
gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457]
gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90]
Length = 212
Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYTFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSASGCEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
Length = 212
Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYTFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 149 TSASGCEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 222
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 56 WSGNYVGARVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 108
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 109 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 158
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + V KS V ++++
Sbjct: 159 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDF--QRFNDV-----KSQVNGIEQRN 207
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 208 NLKNHSIKAGLNYKF 222
>gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
Length = 185
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 19 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 71
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 72 EAEHRIGHGGTLQQSW--NGNAKGKVGYTFDKTLVYGTAGYG--------VTRFKAKDNT 121
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + + KS V ++++
Sbjct: 122 TSASGCEGG----VLIGAGVEQALSGPLSVKAEYDFQRFN-------DVKSQVNGIEQRN 170
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 171 NLKNHSIKAGLNYKF 185
>gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 222
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 56 WSGNYVGARVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 108
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 109 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 158
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + V KS V ++++
Sbjct: 159 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDF--QRFNDV-----KSQVNGIEQRN 207
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 208 NLKNHSIKAGLNYKF 222
>gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99]
gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94]
gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99]
gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis]
gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti]
gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti]
gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94]
gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99]
Length = 212
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGARVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + V KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDF--QRFNDV-----KSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|90419513|ref|ZP_01227423.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
gi|90336450|gb|EAS50191.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
Length = 223
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 27/162 (16%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHT 110
+WSG Y G + Y T ++ T S +G G+ G+N Q + FVFG+
Sbjct: 48 VWSGAYAGAFVG--YNTS----NFDQSTGASFDGDGFVGGVYTGYNWQADQFVFGLEADL 101
Query: 111 TAAKDDS------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ D+ T +L I+G + G +VD L++ GG A
Sbjct: 102 GGSDVDASGTNAATGAQLDADSNIFGSFRARVGVAVDPFLVFATGGLAAAR--------- 152
Query: 165 ESDNSKNAKGRFDGHGS-SVVLGIGLDYMVNYDISLSASYRY 205
N + G D S LG G++ V+ D++ YRY
Sbjct: 153 ---NELSLNGFSDSQTSIGYTLGAGVEARVSDDVTTRLEYRY 191
>gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 212
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNY+G I P T NR G+ +G N+Q + VFG A
Sbjct: 46 WSGNYIGAQIGASSSKVPGPFT-NRTGALG------GVVVGKNMQSGNVVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGSLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G ++G G++ + +S+ A Y + S+ KS V V+++
Sbjct: 149 TSAPGWEGG----ALIGAGVEQALTGPLSVKAEYDFQRF-------SDVKSRVNGVEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|159185257|ref|NP_355480.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140518|gb|AAK88265.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 74/194 (38%), Gaps = 34/194 (17%)
Query: 54 WSGNYVGLHISRLYET-HPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHT 110
WSG YVG H PLA GL G++ G+N Q V G
Sbjct: 45 WSGAYVGAHGGVASPKFSPLASG-----------RGLTGGVQAGYNFQFGSGVVGAEVEG 93
Query: 111 TAAKDDSTFY--RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ +D+ RL+E++ G LKAG ++D L+YG G + K + N
Sbjct: 94 SYLGNDARVPNGRLRERF--RGAAKLKAGVALDHTLLYGTAGL--------TTTKFKDGN 143
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
DG ++G G++ +S Y Y+ + S+ +S + D
Sbjct: 144 GVTGP---DGWKQGYLVGAGVEQSFGGGLSAKFEYNYVSTGNVATTTSSGRSKTDVSD-- 198
Query: 229 GNAHIASLGINMHF 242
H+ G+N F
Sbjct: 199 ---HVIKAGLNYRF 209
>gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor
gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248]
Length = 211
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGI 91
++D EA E G W G Y+G T+ + D +R TY G G
Sbjct: 26 RVDQVPEAPVAQEAPVKPAGSWEGFYLGGA-----GTYNMGDFGSDRHTY------GFGG 74
Query: 92 EL--GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
++ G+N Q V+G+ + DD + ++ KY G V + GY ++ L+YG
Sbjct: 75 QVFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYGWNGSVRGRVGYDMNPFLLYGTA 134
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V KV D S +K F +G G++ V +I+ YRY +
Sbjct: 135 GLAIGDV------KVSDDTSDESKTNF-----GYTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 212
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ +N+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKENT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G V++G G++ ++ +S+ A Y + + V KS V ++++
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDF--QRFNDV-----KSQVNGIEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYRF 212
>gi|115522754|ref|YP_779665.1| porin [Rhodopseudomonas palustris BisA53]
gi|115516701|gb|ABJ04685.1| porin [Rhodopseudomonas palustris BisA53]
Length = 446
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 16/199 (8%)
Query: 54 WSGNYVGLHI-SRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFG--INC 108
W+G Y+G + S A + + +N L P+G G ++G+N Q ++VFG +
Sbjct: 246 WAGFYLGGNFGSGTARERTTATRVATEQFN-LAPDGFIGGGQIGYNWQAANWVFGGEADF 304
Query: 109 HTTAAKDDSTFYR-----LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ +D+ T + K V + GYSV S L YG GG+ V S
Sbjct: 305 QGSTQRDNRTIVQGGVDSYDAKLPWLATVRGRLGYSVGSTLFYGTGGYAVGSVKTSIATP 364
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
++ K + G+ + L + + + Y Y+ + SVNN+ A V
Sbjct: 365 AFTETFTKTKSGWT-AGAGIETPFTLFNLFGPNWTSKTEYLYV--DLGSVNNTFASGLV- 420
Query: 224 RVDRKGNAHIASLGINMHF 242
K H+ GIN HF
Sbjct: 421 -TSSKVTEHVFRTGINYHF 438
>gi|209886119|ref|YP_002289976.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874315|gb|ACI94111.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 237
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 102 FVFGINCHTTAAKDDSTFYRLKE------KYFIYGDVVLKAGYSV-DSLLIYGMGGFGGA 154
FVFG+ + D +F + K ++G V + GY+V D LLIY GG+ A
Sbjct: 99 FVFGLEAEIAGSGIDLSFVDPADGSGASYKLNMFGSVTGRVGYAVNDMLLIYAKGGYAWA 158
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ L V+ +S ++ G+ +G GL+YM+ + S A Y Y + +
Sbjct: 159 ---RTKLSVVDGADSFSSSATHSGY----TIGAGLEYMMARNWSTKAEYLYADYG-KATY 210
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
D R+ H GIN HF
Sbjct: 211 GPAPDGDTGRIGLSN--HTVKFGINYHF 236
>gi|217977074|ref|YP_002361221.1| porin [Methylocella silvestris BL2]
gi|217502450|gb|ACK49859.1| porin [Methylocella silvestris BL2]
Length = 254
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 23/167 (13%)
Query: 54 WSGNYVGLHISRLYETH------PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
W+G Y+G I + T T+ +Y++ G G +G+N+QL FV G+
Sbjct: 43 WTGVYIGGQIGYAWGTQNANFGDSFIGTLGSVSYDTSGVLG-GAHVGYNLQLSQFVVGLE 101
Query: 108 CHTTAAKDDSTFY---------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ + + L + I G + + GY+ D +L+Y GG A V
Sbjct: 102 GSVDGSSMSKSAFLTDEFGNSLTLSAQSNIQGSIRGRVGYAWDRVLLYATGGVAFAGVKA 161
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ D++ + + +G GL+Y V + S+ A YRY
Sbjct: 162 NFYGPFSYDSASSTR-------VGWTVGGGLEYAVTNNWSVRAEYRY 201
>gi|150395644|ref|YP_001326111.1| porin [Sinorhizobium medicae WSM419]
gi|150027159|gb|ABR59276.1| porin [Sinorhizobium medicae WSM419]
Length = 225
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 22/162 (13%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD------VVLKAGYSVDSL 143
G++ G+N Q++ FV G + D Y D V +AGYS D+L
Sbjct: 77 GVQAGYNWQIDGFVIGAEADFLGSSIDGDTPCPNPAYSCTSDTKWLSTVRARAGYSFDNL 136
Query: 144 LIYGMGGFG-GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+Y GG G G + ++++D+ G + + V G G++Y + + S+ A
Sbjct: 137 LVYATGGLGIGRF-------EIKTDDGAGTSGSTIRNDTGWVAGAGVEYGFSPNWSIKAE 189
Query: 203 YRY--IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + ++V+ N R D +G+N F
Sbjct: 190 YMHHDFGERTYTVDGGNPVDADFRFD------TGKIGVNYRF 225
>gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1]
gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1]
gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
Length = 211
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 46 WSGNYVGARVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 98
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+A G G V++G G++ ++ +S+ A Y +
Sbjct: 149 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDF 180
>gi|115525004|ref|YP_781915.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115518951|gb|ABJ06935.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 219
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 19/143 (13%)
Query: 100 EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+VFGI + T ++K +G V + GY+VD+ L Y GGF A D+
Sbjct: 88 SQWVFGIEVDAAGSSLKYTTVGFEDKIDAFGSVTGRVGYAVDAALFYAKGGFAWA---DN 144
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SK G +G GL+YM S+ Y Y + + N
Sbjct: 145 KVTVPGFSESKLHTGW--------TVGGGLEYMFAPAWSVKGEYMYADYGKETYGN---- 192
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
VD H G+N HF
Sbjct: 193 ----IVDIGATVHTVKAGVNYHF 211
>gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 211
Score = 41.6 bits (96), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 55 SGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTT 111
+GN+ G ++ T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 44 AGNWEGFYLGGA-GTYNMGDFGSDRHTY------GFGGQVFTGYNWQQGQIVYGVESDLG 96
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ DD + +K KY G V + GY ++ L+YG G V KV D S
Sbjct: 97 YSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAIGDV------KVSDDTSDE 150
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+K F +G G++ V +I+ YRY +
Sbjct: 151 SKTNF-----GYTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 221
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P + S GI +G N+Q + VFG A
Sbjct: 56 WSGNYVGARVGGSSSKFP-------SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFA 108
Query: 114 KDDSTFY---RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 109 EAEHRIGHGGTLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 158
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+A G G V++G G++ ++ +S+ A Y +
Sbjct: 159 TSAPGWEGG----VLIGAGVEQALSGPLSVKAEYDF 190
>gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae]
Length = 211
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 55 SGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTT 111
+GN+ G ++ T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 44 AGNWEGFYLGGA-GTYNMGDFGSDRHTY------GFGGQVFTGYNWQQGQIVYGVESDLG 96
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ DD + +K KY G V + GY ++ L+YG G V KV D S
Sbjct: 97 YSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAIGDV------KVSDDTSDE 150
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+K F +G G++ V +I+ YRY +
Sbjct: 151 SKTNF-----GYTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|192289773|ref|YP_001990378.1| outer-membrane immunogenic protein precursor [Rhodopseudomonas
palustris TIE-1]
gi|192283522|gb|ACE99902.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris TIE-1]
Length = 207
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 29/191 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ Y + + I + P+G G++ G+N Q + VFG+
Sbjct: 44 WAGPYLGGNLG--YSWGNVTNNITK-------PSGFSGGVQGGYNWQSGNIVFGLEGDIQ 94
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ D TF + K +G + GY+++ +LIY GG + ++ ES +S
Sbjct: 95 FSTADDTFAQYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLKGQNVFASESHSS-- 152
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G G ++ +S Y Y+ S++ SN + + NA
Sbjct: 153 ---------AGWTVGAGAEFAFAPKLSAKVEYLYM-----SLSTSNFF--ITGMPNGYNA 196
Query: 232 HIASLGINMHF 242
+ GIN HF
Sbjct: 197 GLVRAGINYHF 207
>gi|75676711|ref|YP_319132.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
gi|74421581|gb|ABA05780.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
Length = 206
Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 29/191 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ Y + +++ R P+G+ G++ G N Q VFG+
Sbjct: 43 WAGPYLGGNLG--YAWGSVQNSLTR-------PDGVFGGVQAGFNWQSGPVVFGLEGDIQ 93
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A + TF K +G V + GY+ +++L+YG GG + + ES S
Sbjct: 94 ANAANDTFAAWKFSNPWFGTVRGRIGYAFNNVLVYGTGGLAFGKLRAETFGLSESHTS-- 151
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G+G + + + + Y Y V+ S++ + +
Sbjct: 152 ---------AGWTVGVGAEVGIYQNWTAKVEYLY-------VDLSSSSFTITGAPHSYQS 195
Query: 232 HIASLGINMHF 242
+ GIN HF
Sbjct: 196 GMVRAGINYHF 206
>gi|39934247|ref|NP_946523.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39648095|emb|CAE26615.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 226
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 29/191 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ Y + + I + P+G G++ G+N Q + VFG+
Sbjct: 63 WAGPYLGGNLG--YSWGNVTNNITK-------PSGFSGGVQGGYNWQSGNIVFGLEGDIQ 113
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ D TF + K +G + GY+++ +LIY GG + ++ ES +S
Sbjct: 114 FSTADDTFAQYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLKGQNVFASESHSS-- 171
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G G ++ +S Y Y+ S++ SN + + NA
Sbjct: 172 ---------AGWTVGAGAEFAFAPKLSAKVEYLYM-----SLSTSNFF--ITGMPNGYNA 215
Query: 232 HIASLGINMHF 242
+ GIN HF
Sbjct: 216 GLVRAGINYHF 226
>gi|83308665|emb|CAJ01573.1| outer membrane protein [uncultured bacterium]
Length = 275
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 54 WSGNYVGLHISRLYETHPL--ADTINRKTYNS----LLPNGL--GIELGHNIQ------- 98
WSG Y+G+ + + + P+ D + + N+ L P G+ G +G+N+Q
Sbjct: 53 WSGLYLGVQVGYAWGSDPVDEVDVLTPRFANNAFFNLQPKGVLGGAHVGYNLQFTNWNWL 112
Query: 99 --------LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
LE V G + T RL+ + G + + G + D LLIYG GG
Sbjct: 113 SSSGVVIGLEGSVDGSSLSGTRTSASGLTMRLRTE--TQGSLRARIGLAWDRLLIYGTGG 170
Query: 151 FGGAYVIDSSLEK------VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
A D+ + V+ +SK G +G G+DY + + S+ YR
Sbjct: 171 AAFAGFDDNYVTVFGTPFFVDEQDSKTRTGW--------TVGGGVDYAITPNWSIGVEYR 222
Query: 205 Y 205
Y
Sbjct: 223 Y 223
>gi|85716040|ref|ZP_01047017.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
gi|85697238|gb|EAQ35119.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
Length = 206
Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ Y + +++ + P+G+ G++ G+N Q VFG+
Sbjct: 43 WAGPYLGGNLG--YAWGSVQNSLTK-------PDGVFGGVQAGYNWQSGSMVFGLEGDIQ 93
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
A + TF K +G V + GY+ ++L+YG GG
Sbjct: 94 ANAANDTFAAWKFSNPWFGTVRGRLGYAFSNVLVYGTGGL 133
>gi|115522948|ref|YP_779859.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115516895|gb|ABJ04879.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 207
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGI--NCH 109
W+G Y+G ++ + D N NS P+GL GI+ G+N Q V+G+ +
Sbjct: 44 WAGPYLGGNLG-----YAWGDIHN----NSAKPSGLSGGIQGGYNWQSGQMVYGLEGDLQ 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
T A D Y+ +F G V + GY+ ++++ YG GG
Sbjct: 95 ITGANDTFAQYKFSNPWF--GTVRGRIGYAFNNVMFYGTGG 133
>gi|254513426|ref|ZP_05125491.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221532430|gb|EEE35426.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 185
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G YVG + T+ L+ + ++ + LG+ G+ +Q +DFVFG
Sbjct: 24 WNGAYVGFSLGT-NTTNELSSNVT-GSFEADSSTALGVFGGYTVQNDDFVFGGEVAFLRT 81
Query: 114 KDDSTFYRLKEKYFIYG--DVVLKAGYSVDSLLIYGMGGF 151
D +E F +G D+ +AGY V+++L YG+ GF
Sbjct: 82 PDLEFEVDGREVTFDFGIFDLKGRAGYVVNNILFYGVAGF 121
>gi|217977073|ref|YP_002361220.1| porin [Methylocella silvestris BL2]
gi|217502449|gb|ACK49858.1| porin [Methylocella silvestris BL2]
Length = 239
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLAD-----TINRKTYNSLLPNGL--GIELGHNIQLEDFVFG 105
WSG Y+G I + + L+ + +YN P+G+ G +G+N+Q V G
Sbjct: 40 TWSGLYLGGQIGYGWANNALSGWGPFFVFSGASYN---PSGVLGGAHVGYNLQFNQIVLG 96
Query: 106 INCHTTAAKDDSTFYRLKEKYF----IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+ A D T+ Y + G + + G++VD L Y GG A V +
Sbjct: 97 LEGDVEATGVDKTYAFGPTVYTTQIPVQGSIRARFGFAVDRALFYVTGGAAFASVTN-QY 155
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ NS N F G +G GL+Y + + S+ A YRY
Sbjct: 156 QSYLGYNSLNRS--FAGW----TIGGGLEYALTNNWSVRAEYRY 193
>gi|190891163|ref|YP_001977705.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190696442|gb|ACE90527.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 211
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 55 SGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTT 111
+GN+ G ++ T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 44 AGNWEGFYLGGA-GTYNMGDFGSDRHTY------GFGGQVFTGYNWQQGQIVYGVESDLG 96
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVESDNS 169
+ DD + +K KY G V + GY ++ L+YG G G V D + SD S
Sbjct: 97 YSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIKVSDGT-----SDES 151
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
K A G +G G++ V +I+ YRY +
Sbjct: 152 KTAYG--------YTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56]
Length = 211
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 55 SGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTT 111
+GN+ G ++ T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 44 AGNWEGFYLGGA-GTYNMGDFGSDRHTY------GFGGQVFTGYNWQQGQIVYGVESDLG 96
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVESDNS 169
+ DD + +K KY G V + GY ++ L+YG G G V D + SD S
Sbjct: 97 YSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIKVSDDT-----SDES 151
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
K A G +G G++ V +I+ YRY +
Sbjct: 152 KTAYG--------YTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|209886326|ref|YP_002290183.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874522|gb|ACI94318.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 208
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 24/161 (14%)
Query: 86 PNGL--GIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS 142
P G G++ G+N Q +VFG+ A D TF K YG V + GY+++
Sbjct: 68 PTGFAGGVQGGYNWQFGSPWVFGLEADIQATGADDTFAAWKFSNPWYGTVRGRVGYALNP 127
Query: 143 -LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
++YG GG + S+ S S + +G G ++ +N SL A
Sbjct: 128 NFMLYGTGGLAFGELKGSTPFYSASHVS-----------AGWTVGAGAEFALNNAWSLKA 176
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y+ S++ + N +G+N HF
Sbjct: 177 EYLYVDLD---------SSNINGLPNGYNFSTVRVGVNYHF 208
>gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2]
gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2]
Length = 255
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 20/129 (15%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTF-------------YRLKEKYFIYGDVVLKA 136
G +G+N+QL FV G+ T+ L I G + +
Sbjct: 82 GAHVGYNLQLNQFVVGLEGSVDGTSLSKTYSGTAFVPGFGVAGINLHTSADIQGSIRGRV 141
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY+ D +L+Y GG A V S D+S K +G GL+Y V +
Sbjct: 142 GYAWDRVLVYATGGVAFAGVKASLSTPFSYDSSSTTK-------VGWTVGGGLEYAVTNN 194
Query: 197 ISLSASYRY 205
S+ A YRY
Sbjct: 195 WSIRAEYRY 203
>gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188]
gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
WSGNYVG + P T NR G+ +G N+Q + VFG A
Sbjct: 46 WSGNYVGAQVGASSSRVPGPFT-NRTGALG------GVVVGKNMQSGNVVFGGELEGNFA 98
Query: 114 KDD---STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES-DNS 169
+ + L++ + G+ K GY+ D L+YG G+G + + ++ DN+
Sbjct: 99 EAEHRIGNGGSLQQSW--NGNAKGKVGYAFDKTLVYGTAGYG--------VTRFKAKDNT 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+A G G ++G G++ ++ +S+ A Y + + V KS V V+++
Sbjct: 149 TSAPGWEGG----ALVGAGVEQALSGPLSVKAEYDF--QRFNDV-----KSRVNGVEQRN 197
Query: 230 NA--HIASLGINMHF 242
N H G+N F
Sbjct: 198 NLKNHSIKAGLNYKF 212
>gi|218513075|ref|ZP_03509915.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 134
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--F 151
G+N Q V+G+ + DD + +K KY G V + GY ++ L+YG G
Sbjct: 2 GYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAL 61
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G V D + SD SK A G +G G++ V +I+ YRY +
Sbjct: 62 GNIKVSDGT-----SDESKTAYG--------YTVGAGVEAFVTNNITTRLEYRYTDYQ 106
>gi|148255876|ref|YP_001240461.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146408049|gb|ABQ36555.1| putative outer-membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 237
Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGI----N 107
WSG Y+G++ + TH D + S +G +G ++G+ Q+ FVFG+ N
Sbjct: 42 WSGFYIGVNGGGGW-THNTWDVVGGGREGSHDSSGGTIGGQVGYRWQMGQFVFGVEAQGN 100
Query: 108 CHTTAAKDDSTFY--RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
A + S + R + K +G + GY+ +++L+Y GG I S+ +
Sbjct: 101 WADFAGDNQSALFGTRNRTKTDAFGLFTGQVGYAFNNVLVYAKGG----AAITSNTYTIT 156
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ + G D V+G GL+Y + SL Y ++ +V+ SD +
Sbjct: 157 NAATGAFLGSNDNTRWGGVVGAGLEYGFAPNWSLGVEYDHLFMDRQTVSFGALGSDSIKQ 216
Query: 226 D 226
D
Sbjct: 217 D 217
>gi|146343868|ref|YP_001208916.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146196674|emb|CAL80701.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 278
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 63/275 (22%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGI----WSGNYVGLHISRLYETHPL 72
+V+ + AV L + + F AD + Y W+G Y G +I + L
Sbjct: 4 VVMKTLASAVSLLIASSLSTF-AADLSARYTKAPPPAAIYNWTGGYFGGNIGYGWGRSNL 62
Query: 73 ADTINRKTY-----------------NSLLPNGL--GIELGHNIQLEDFVFGI------- 106
T+++ + N L P+G+ G++ G+N Q VFGI
Sbjct: 63 GTTLDQTSSWATEPVPFQNQFVAISNNRLNPSGVVGGLQAGYNWQAGPSVFGIEADINGS 122
Query: 107 -----------NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
N TT ++S ++ +F+ + +AGY++D+ L+Y GG
Sbjct: 123 GVNKRVVYTGVNVPTTRTFNES----IRNDWFM--TLRGRAGYAIDTTLLYVTGGLAVGN 176
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
V S + S N N G D + +G G+++ + ++ A Y Y + S+N
Sbjct: 177 VKGS--WDLTSGNGYNKTGSADQTRAGWTIGAGVEHAFAPNWTVKAEYLYT--DLGSINY 232
Query: 216 SNAKSD-----------VERVDRKGNAHIASLGIN 239
++ VER+ + H +G+N
Sbjct: 233 TSGYVPGSTFAPPGFNYVERLSQDFTFHTVRIGVN 267
>gi|299134246|ref|ZP_07027439.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
gi|298590993|gb|EFI51195.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
Length = 209
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHT 110
W+G Y+G ++ + D N T P+G GI+ G+N Q +V G+
Sbjct: 44 WAGPYLGANLG-----YNFGDVSNSGT----SPSGFSGGIQGGYNWQFGTPWVLGLEADL 94
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNS 169
A D TF K YG + + GY+++ +IYG GG + + E+ +
Sbjct: 95 QATGADDTFAAWKFSNPWYGTIRGRVGYAINPNFMIYGTGGLAFGQLKGTMPGLSETHTT 154
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ +G G ++ + + SL A Y Y+
Sbjct: 155 -----------AGWTVGGGAEFALTNNWSLKAEYMYV 180
>gi|306841014|ref|ZP_07473744.1| outer membrane protein Omp31 [Brucella sp. BO2]
gi|306846349|ref|ZP_07478900.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306273192|gb|EFM55083.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306288964|gb|EFM60252.1| outer membrane protein Omp31 [Brucella sp. BO2]
Length = 239
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 90 GIELGHNIQLED-FVFGINC--HTTAAKDDSTFY------RLKEKYFIYGDVVLKAGYS- 139
G++ G+N QL++ FV G + K D + + + K +G V + GY+
Sbjct: 88 GVQAGYNWQLDNGFVLGAEADFQGSTVKGDISAHLDDLDGNAETKVEWFGTVRARLGYTA 147
Query: 140 VDSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ LL+YG GG V S +E +SK G +G G +Y +N + +
Sbjct: 148 TERLLVYGTGGLAYGKVKSSLGIEDWGVSSSKTKAGW--------TVGAGAEYAINNNWT 199
Query: 199 LSASYRYI---PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L + Y Y H + +VN + K+DV+ H +G+N F
Sbjct: 200 LKSEYLYTDLGKHDLINVNELSLKNDVKF-------HTVRVGLNYKF 239
>gi|316932716|ref|YP_004107698.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600430|gb|ADU42965.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris DX-1]
Length = 207
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 33/193 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+G Y+G ++ Y + + I + P+G G++ G+N Q + VFG+
Sbjct: 44 WAGPYLGGNLG--YGWGNVTNNITK-------PSGFSGGLQGGYNWQSGNIVFGLEGDIQ 94
Query: 112 AAKDDSTF--YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ D TF Y+ +F G + GY+++ +LIY GG + +L ES +S
Sbjct: 95 FSTADDTFAPYKFSNPWF--GTGRGRIGYAMNDVLIYATGGLAFGQLKGQNLAVSESHSS 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +G G ++ +S Y Y+ S NN + +
Sbjct: 153 -----------AGWTVGAGAEFAFAPKLSAKVEYLYMS---LSTNN----FFITGMPNGY 194
Query: 230 NAHIASLGINMHF 242
NA + GIN HF
Sbjct: 195 NAGMVRAGINYHF 207
>gi|260460927|ref|ZP_05809177.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259033504|gb|EEW34765.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 255
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 66/180 (36%), Gaps = 37/180 (20%)
Query: 54 WSGNYVGLHISRLYETHPLADTI--NRKTYNSLLPNGL------------GIELGHNIQL 99
WSG YVG HI D N + L+P G GI G Q
Sbjct: 40 WSGFYVGGHIGVADGDITATDMTEPNGGFFTELVPAGTEGFDFNKAGVAGGIHAGAQWQW 99
Query: 100 EDFVFGINCHTTAAKDDST----FYRLKE----KYFIYGDVVLKAGYSVDSLLIYGMGGF 151
FV G TA T +Y + K Y +V + GY+ D +LIY G+
Sbjct: 100 GQFVLGGEATWTATGIRKTITSPYYPDSDTETGKISNYATIVGRVGYAFDRVLIYAKAGY 159
Query: 152 GGAYV-----IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G V + +L E + +N LG G+DY + ++SL Y +I
Sbjct: 160 AGGKVDFRARDNDALVSYEKNEWQNG----------YALGAGIDYALTNNLSLGVDYTHI 209
>gi|218663696|ref|ZP_03519626.1| outer membrane protein [Rhizobium etli IE4771]
Length = 203
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 55 SGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTT 111
+GN+ G ++ T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 36 AGNWEGFYLGGA-GTYNMGDFGSDRHTY------GFGGQVFTGYNWQAGQIVYGVESDLG 88
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVESDNS 169
+ DD + ++ KY G V + GY ++ L+YG G G V D + SD S
Sbjct: 89 YSGDDVSSGGVENKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIKVSDDT-----SDES 143
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
K A G +G G++ V +I+ YRY +
Sbjct: 144 KTAYG--------YTVGAGVEAFVTNNITTRLEYRYTDYQ 175
>gi|319784137|ref|YP_004143613.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170025|gb|ADV13563.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 255
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 67/188 (35%), Gaps = 53/188 (28%)
Query: 54 WSGNYVGLH-------ISRLYETHPLADTINRKTYNSLLPNGL------------GIELG 94
WSG YVG H I+ T P N + L+P G GI G
Sbjct: 40 WSGLYVGGHLGVANGDITATDMTEP-----NGGFFTDLVPAGTEGFDFNKAGVAGGIHAG 94
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI-----------YGDVVLKAGYSVDSL 143
Q F+ G TA T + YF Y VV + GY+ D +
Sbjct: 95 AQWQWGQFILGGEATWTATGIRKT---ITSPYFPDSDTETAKISNYATVVGRVGYAFDRV 151
Query: 144 LIYGMGGFGGAYV-----IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
LIY G+ G V + +L E + +N LG G+DY + ++S
Sbjct: 152 LIYAKAGYAGGKVDFRARDNDALVTYEKNEWQNG----------YALGAGIDYALTNNLS 201
Query: 199 LSASYRYI 206
L Y ++
Sbjct: 202 LGVDYTHV 209
>gi|75675529|ref|YP_317950.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74420399|gb|ABA04598.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 241
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GYS L+Y GG+ D +L ++ + A S +G GL
Sbjct: 118 GSVTGRLGYSWGPTLLYAKGGYA---FRDGALGVTDAAGAPQAFTTTGNRNSGYTVGAGL 174
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YM + S A Y+Y + + + + +DV + + H G+N F
Sbjct: 175 EYMFAPNWSAKAEYQYF-NFGRTTFGAGSPADVVGASFRNDEHTVKAGVNYRF 226
>gi|148255740|ref|YP_001240325.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407913|gb|ABQ36419.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. BTAi1]
Length = 212
Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 31/196 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-GIELGHNIQLEDFVFGINCHTTA 112
W+G Y+G N + L G G +G+N Q VFG+
Sbjct: 41 WTGFYIGA----------FGGYANEDASTAALKGGFAGGTVGYNWQQGPLVFGLEADAAW 90
Query: 113 AKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG-GAYVIDSSLEKVES 166
A ++T + L ++ G V + GY+ D++L+YG GG+ G + +++ V
Sbjct: 91 ADINATVGIPGVFGLTDRIESTGTVRGRIGYAFDTVLLYGTGGYAWGNNKLSATVGGVAG 150
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+K G G G+++M SL Y Y S+ +S +
Sbjct: 151 SETKFLSGW--------AAGAGVEWMFAPKWSLKGEYLY-----KSLESSTYFGGAVPLG 197
Query: 227 RKGNAHIASLGINMHF 242
N H +G+N HF
Sbjct: 198 TL-NLHTFQVGVNYHF 212
>gi|13471424|ref|NP_102990.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022166|dbj|BAB48776.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 225
Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 28/217 (12%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYET--HPLADT-INRKTYNSLLPNGLGI----E 92
AD VE W+G Y+G I + P T + ++ +G G+
Sbjct: 23 ADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFTEASPNIFDQDNADGSGVVGGLH 82
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVLKAGYSVDSLLI 145
G+N Q FVFG A D K ++ V +AG++ D +LI
Sbjct: 83 AGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFKARWVA--SVRARAGFAFDRVLI 140
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
YG GG+ AY ++ + + ++ F+G +G G +Y + +I++ YRY
Sbjct: 141 YGTGGY--AY-LNGKADTRDVGRQESHSASFNGW----TIGAGAEYALTDNITVRGEYRY 193
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V +N D+ H ++G++ F
Sbjct: 194 ADFGSKTVVFNNYVEDISPA-----LHTVTIGVSYKF 225
>gi|86357119|ref|YP_469011.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86281221|gb|ABC90284.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 211
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
Query: 55 SGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTT 111
+GN+ G ++ T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 44 AGNWEGFYLGGA-GTYNMGDFGSDRHTY------GFGGQVFTGYNWQAGQIVYGVESDLG 96
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVESDNS 169
+ DD + +K KY G V + GY ++ L+YG G G V D + SD S
Sbjct: 97 YSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNVKVSDGT-----SDES 151
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
K G +G G++ V +I+ YRY +
Sbjct: 152 KTNYG--------YTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|154246285|ref|YP_001417243.1| porin [Xanthobacter autotrophicus Py2]
gi|154160370|gb|ABS67586.1| porin [Xanthobacter autotrophicus Py2]
Length = 207
Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 34/192 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHT 110
W+G Y+G + + T+N P G G + G+N Q FV G+
Sbjct: 47 WTGFYIGANAG-----YGWGSTVNSD------PGGFIGGFQAGYNYQFASPFVLGVETDF 95
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + Y L G V + G+S D +L+YG GGF AY SL+ + +S
Sbjct: 96 NFSGLSAGGYSLD----YLGTVRARLGWSFDRVLVYGTGGF--AYG-QGSLDVLGLSSSS 148
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G G G+ V + + S A Y Y+ + ++ + + VD N
Sbjct: 149 TQTGWTIGAGAEVAF--------DRNWSARAEYLYV-----DLGSATYPTVIGPVDSGIN 195
Query: 231 AHIASLGINMHF 242
A+I G+N F
Sbjct: 196 ANILRAGVNYRF 207
>gi|17986685|ref|NP_539319.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|256045237|ref|ZP_05448134.1| outer membrane protein Omp31 [Brucella melitensis bv. 1 str. Rev.1]
gi|256114189|ref|ZP_05454943.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|17982306|gb|AAL51583.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 201
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 81 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 139
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H L
Sbjct: 140 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRL 195
Query: 237 GINMHF 242
G+N F
Sbjct: 196 GLNYKF 201
>gi|225853091|ref|YP_002733324.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|256263422|ref|ZP_05465954.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|260565169|ref|ZP_05835653.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|265991667|ref|ZP_06104224.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|265995505|ref|ZP_06108062.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|225641456|gb|ACO01370.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|260151237|gb|EEW86331.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|262766618|gb|EEZ12407.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|263002451|gb|EEZ15026.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|263093434|gb|EEZ17484.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|326409637|gb|ADZ66702.1| outer membrane protein Omp31 [Brucella melitensis M28]
gi|326539339|gb|ADZ87554.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 202
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 82 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 140
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H L
Sbjct: 141 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRL 196
Query: 237 GINMHF 242
G+N F
Sbjct: 197 GLNYKF 202
>gi|312112850|ref|YP_004010446.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311217979|gb|ADP69347.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 233
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 15/148 (10%)
Query: 95 HNIQLEDFVFGINCHTTAAK--DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+N Q +FV+G+ A + S Y KE +G + + GY+ + L+YG GGF
Sbjct: 85 YNFQSGNFVYGLETDLQAGRITGKSDDYASKETTDWFGTLRGRLGYAFGNTLLYGTGGFA 144
Query: 153 -GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
G + V N G G G++Y V+ + SL Y+Y+
Sbjct: 145 YGGVNQKMNYADVLFSNDDTRTG--------WTAGAGIEYKVSGNWSLKGEYQYVDFGKE 196
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ S A S +E + + H A +G+N
Sbjct: 197 DL--SGAASTIEGPET--SFHTAKIGLN 220
>gi|209548691|ref|YP_002280608.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534447|gb|ACI54382.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 211
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 52 GIWSGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINC 108
G W G Y+G T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 45 GSWEGFYLGGA-----GTYNMGDFGSDRHTY------GFGGQVFTGYNWQQGQIVYGVES 93
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVES 166
+ DD + +K KY G V + GY ++ L+YG G G V D + S
Sbjct: 94 DLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNVKVSDGT-----S 148
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
D SK G +G G++ V +I+ YRY +
Sbjct: 149 DESKTNYG--------YTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|254700931|ref|ZP_05162759.1| outer membrane protein, putative [Brucella suis bv. 5 str. 513]
gi|261751446|ref|ZP_05995155.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261741199|gb|EEY29125.1| outer membrane protein [Brucella suis bv. 5 str. 513]
Length = 232
Score = 38.5 bits (88), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHT 110
W+G Y G + + L + N T + PNG G+ G+N +F+ G++ +
Sbjct: 42 WAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGLDANV 100
Query: 111 ------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYV 156
T+ T + ++ G V +AGY++D + Y GG FGG
Sbjct: 101 DYNNLKKSRDFITSGNPVQTTGETQLRW--SGAVRARAGYAIDRFMPYIAGGIAFGG--- 155
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
I +SL ++ + S +K + + +G G+DY ++ L YRY +
Sbjct: 156 IKNSL-RIGGEESSKSKSKTQ---TGWTVGAGIDYAATDNVLLRLEYRYTDY 203
>gi|256060262|ref|ZP_05450437.1| outer membrane protein, putative [Brucella neotomae 5K33]
gi|261324235|ref|ZP_05963432.1| Omp25d [Brucella neotomae 5K33]
gi|46251251|gb|AAS84596.1| Omp25d [Brucella neotomae]
gi|261300215|gb|EEY03712.1| Omp25d [Brucella neotomae 5K33]
Length = 230
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHT 110
W+G Y G + + L + N T + PNG G+ G+N +F+ G++ +
Sbjct: 42 WAGAYFGGQVGYGWGRAKLENRTNGST-SEFKPNGFIGGLYTGYNFDTGNNFILGLDANV 100
Query: 111 ------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYV 156
T+ T + ++ G V +AGY++D + Y GG FGG
Sbjct: 101 DYNNLKKSRDFITSGNPVQTTGETQLRW--SGAVRARAGYAIDRFMPYIAGGVAFGG--- 155
Query: 157 IDSSLE--KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
I +SL ES SK G +G G+DY ++ L YRY +
Sbjct: 156 IKNSLRIGGEESSKSKTQTG--------WTVGAGIDYAATDNVLLRLEYRYTDY 201
>gi|115524922|ref|YP_781833.1| hypothetical protein RPE_2916 [Rhodopseudomonas palustris BisA53]
gi|115518869|gb|ABJ06853.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 578
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 85/227 (37%), Gaps = 45/227 (19%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKT---------YNSLLPNGL--------------- 89
W+G YVG H+ + +D + Y P GL
Sbjct: 344 WTGAYVGGHLGAGFGPKHWSDPLGSSMALVDPGPPDYAVGTPRGLNMAGFGKSTPMAGGL 403
Query: 90 -GIELGHNIQLEDFVFGINCHTTAA--KDDSTFY------RLKEKYFIYGDVVLKAGYSV 140
G+++G+N+Q+++ V G A K T Y + + G + GY++
Sbjct: 404 GGLQIGYNVQIDNTVLGFEVEAALADLKGSHTIYSGIGGGQAEAHTKALGTFAGRLGYAL 463
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV-------VLGIGLDYMV 193
D LIY G G V D +L S N +G D G +V V+G G++Y V
Sbjct: 464 DRSLIYVKAG-GAWAVTDHTLNT--SSVYGNVQG-LDCCGDTVSSSRFGWVVGAGIEYAV 519
Query: 194 NYDISLSASYRYIPHHIHSVN-NSNAKSDVERVDRKGNAHIASLGIN 239
N S + Y Y+ S+ +NA + H +G+N
Sbjct: 520 NRTWSATFEYDYMDFGTQSIRFPTNAGLGLPPAAIDQAFHTVKMGVN 566
>gi|90418791|ref|ZP_01226702.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
gi|90336871|gb|EAS50576.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 90 GIELGHNIQLEDFVFG-------INCHTT---AAKDDSTFYRLKEKYFIYGDVVLKAGYS 139
G +G++ Q+ DFV G I+ T STF + ++ G V + GY+
Sbjct: 91 GGHIGYDYQINDFVVGAVADINYIDAETNRSYTTGGGSTFSTSSDINYL-GTVRARVGYA 149
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV--VLGIGLDYMVNYDI 197
+DS+L+YG GG A V +++ S N D + + + +G G+D M +I
Sbjct: 150 MDSVLLYGTGGLAYAGVDNNASAPASSGTFTNYTFEQDENDTDIGYAVGGGVDVMATNNI 209
Query: 198 SLSASYRYI 206
S Y Y
Sbjct: 210 SFGVEYLYT 218
>gi|91975275|ref|YP_567934.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91681731|gb|ABE38033.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 454
Score = 38.1 bits (87), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 27/205 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN--------SLLPNGL--GIELGHNIQLEDFVFGI 106
N+ GL+I + A NR T +L P G G ++G+N Q ++VFG
Sbjct: 250 NWAGLYIGGNFGGSATAR--NRTTATIGGFTEQFNLSPEGFIGGGQIGYNWQAANWVFGA 307
Query: 107 NC--HTTAAKDDSTF-------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ KDD T Y K +F G + GYSV S L+Y GG+ V
Sbjct: 308 EADFQGSTQKDDRTAVFGSTVAYNQKLPWF--GTARARLGYSVGSTLLYATGGYAYGNVK 365
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + + ++ S ++ + G V + L ++ + + Y Y+ + S +
Sbjct: 366 TNIVTPLSNETSNRSRSGYA-VGGGVEMPFSLFGLLGPNWTSKTEYLYV--DLGSTTDVF 422
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
A + K H+ GIN HF
Sbjct: 423 A-GGLGVSTSKVTEHMVRTGINYHF 446
>gi|327193361|gb|EGE60264.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 211
Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
Query: 55 SGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTT 111
+GN+ G ++ T+ + D +R TY G G ++ G+N Q V+G+
Sbjct: 44 AGNWEGFYLGGA-GTYNMGDFGSDRHTY------GFGGQVFTGYNWQQGQIVYGVESDLG 96
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVESDNS 169
+ DD + +K KY G V + GY ++ L+YG G G V D + SD S
Sbjct: 97 YSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIKVSDGT-----SDES 151
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
K G +G G++ V +I+ YRY +
Sbjct: 152 KTNYG--------YTVGAGVEAFVTNNITTRLEYRYTDYQ 183
>gi|49475276|ref|YP_033317.1| hemin binding protein d [Bartonella henselae str. Houston-1]
gi|49238082|emb|CAF27289.1| Hemin binding protein d [Bartonella henselae str. Houston-1]
Length = 274
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
E+ ++E G N T+A + + LK+K+F G +K G+ VD ++ Y GG
Sbjct: 128 EVSSEKKVERVSVGTNQDTSAEVTNGALSHTLKQKWF--GATRVKVGFVVDRMMPYIAGG 185
Query: 151 FGGAYVIDSSLEKVESDNSKNA----------KGRFDGHGSSVVLGIGLDYMVNYDISLS 200
AY ++ + E+D +K A K G+ LG G+D+ + ++ +
Sbjct: 186 V--AYTQLQNIFEKEADKTKKAIDISNVIHDEKKTMVGY----TLGGGIDFAMTDNVIVR 239
Query: 201 ASYRY 205
A YRY
Sbjct: 240 AEYRY 244
>gi|23502485|ref|NP_698612.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|163843871|ref|YP_001628275.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225628052|ref|ZP_03786088.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256370036|ref|YP_003107547.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260169279|ref|ZP_05756090.1| outer membrane protein Omp31 [Brucella sp. F5/99]
gi|260565895|ref|ZP_05836365.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|261219740|ref|ZP_05934021.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261222753|ref|ZP_05937034.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|261315779|ref|ZP_05954976.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261318224|ref|ZP_05957421.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261322630|ref|ZP_05961827.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261325677|ref|ZP_05964874.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261752901|ref|ZP_05996610.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261755562|ref|ZP_05999271.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|261758791|ref|ZP_06002500.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|265989255|ref|ZP_06101812.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|265998716|ref|ZP_06111273.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|294852932|ref|ZP_06793605.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|23348478|gb|AAN30527.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251200|gb|AAS84571.1| Omp31b [Brucella neotomae]
gi|46251202|gb|AAS84572.1| Omp31b [Brucella pinnipedialis]
gi|46251204|gb|AAS84573.1| Omp31b [Brucella ceti]
gi|46251206|gb|AAS84574.1| Omp31b [Brucella ceti]
gi|46251208|gb|AAS84575.1| Omp31b [Brucella ceti]
gi|157310319|emb|CAN43873.1| outer membrane protein 31b [Brucella microti CCM 4915]
gi|157310321|emb|CAN43874.1| outer membrane protein 31b [Brucella microti]
gi|163674594|gb|ABY38705.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225617215|gb|EEH14261.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256000199|gb|ACU48598.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260155413|gb|EEW90493.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|260921337|gb|EEX87990.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|260924829|gb|EEX91397.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261295320|gb|EEX98816.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261297447|gb|EEY00944.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261301657|gb|EEY05154.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261304805|gb|EEY08302.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261738775|gb|EEY26771.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|261742654|gb|EEY30580.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261745315|gb|EEY33241.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|262553340|gb|EEZ09174.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|264661452|gb|EEZ31713.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|294821521|gb|EFG38520.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 261
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 141 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 199
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H L
Sbjct: 200 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRL 255
Query: 237 GINMHF 242
G+N F
Sbjct: 256 GLNYKF 261
>gi|254718339|ref|ZP_05180150.1| outer membrane protein, putative [Brucella sp. 83/13]
gi|265983298|ref|ZP_06096033.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839561|ref|ZP_07472367.1| outer membrane protein [Brucella sp. NF 2653]
gi|306842593|ref|ZP_07475242.1| outer membrane protein [Brucella sp. BO2]
gi|264661890|gb|EEZ32151.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306287238|gb|EFM58726.1| outer membrane protein [Brucella sp. BO2]
gi|306405347|gb|EFM61620.1| outer membrane protein [Brucella sp. NF 2653]
Length = 230
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHT 110
W+G Y G + + L + N T + PNG G+ G+N +F+ G++ +
Sbjct: 42 WAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGLDANV 100
Query: 111 ------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYV 156
T+ T + ++ G V +AGY++D + Y GG FGG
Sbjct: 101 DYNNLKKSRDFITSGNPVQTTGETQLRW--SGAVRARAGYAIDRFMPYIAGGVAFGG--- 155
Query: 157 IDSSLE--KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
I +SL ES SK G +G G+DY ++ L YRY +
Sbjct: 156 IKNSLRIGGEESSKSKTQTG--------WTVGAGIDYAATDNVLLRLEYRYTDY 201
>gi|62290498|ref|YP_222291.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82700421|ref|YP_414995.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|237816005|ref|ZP_04595002.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260547029|ref|ZP_05822768.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755331|ref|ZP_05867679.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260758554|ref|ZP_05870902.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260762376|ref|ZP_05874719.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260884349|ref|ZP_05895963.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|261214598|ref|ZP_05928879.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297248879|ref|ZP_06932597.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|46251194|gb|AAS84568.1| Omp31b [Brucella abortus]
gi|62196630|gb|AAX74930.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82616522|emb|CAJ11595.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|237789303|gb|EEP63514.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260096079|gb|EEW79956.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668872|gb|EEX55812.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260672808|gb|EEX59629.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260675439|gb|EEX62260.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260873877|gb|EEX80946.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|260916205|gb|EEX83066.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297176048|gb|EFH35395.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 261
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 141 FVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 199
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H L
Sbjct: 200 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRL 255
Query: 237 GINMHF 242
G+N F
Sbjct: 256 GLNYKF 261
>gi|17988113|ref|NP_540747.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501032|ref|NP_697159.1| outer membrane protein [Brucella suis 1330]
gi|62289099|ref|YP_220892.1| hypothetical protein BruAb1_0115 [Brucella abortus bv. 1 str.
9-941]
gi|82699037|ref|YP_413611.1| outer membrane protein [Brucella melitensis biovar Abortus 2308]
gi|148559864|ref|YP_001258156.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161618106|ref|YP_001591993.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163842393|ref|YP_001626797.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189023374|ref|YP_001934142.1| outer membrane protein [Brucella abortus S19]
gi|225626661|ref|ZP_03784700.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237814591|ref|ZP_04593589.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|254690428|ref|ZP_05153682.1| outer membrane protein, putative [Brucella abortus bv. 6 str. 870]
gi|254694916|ref|ZP_05156744.1| outer membrane protein, putative [Brucella abortus bv. 3 str.
Tulya]
gi|254707184|ref|ZP_05169012.1| outer membrane protein, putative [Brucella pinnipedialis
M163/99/10]
gi|254709271|ref|ZP_05171082.1| outer membrane protein, putative [Brucella pinnipedialis B2/94]
gi|254713306|ref|ZP_05175117.1| outer membrane protein, putative [Brucella ceti M644/93/1]
gi|254716340|ref|ZP_05178151.1| outer membrane protein, putative [Brucella ceti M13/05/1]
gi|254731459|ref|ZP_05190037.1| outer membrane protein, putative [Brucella abortus bv. 4 str. 292]
gi|256030794|ref|ZP_05444408.1| outer membrane protein, putative [Brucella pinnipedialis M292/94/1]
gi|256045910|ref|ZP_05448784.1| outer membrane protein, putative [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112624|ref|ZP_05453545.1| outer membrane protein, putative [Brucella melitensis bv. 3 str.
Ether]
gi|256158815|ref|ZP_05456676.1| outer membrane protein, putative [Brucella ceti M490/95/1]
gi|256254200|ref|ZP_05459736.1| outer membrane protein, putative [Brucella ceti B1/94]
gi|256258680|ref|ZP_05464216.1| outer membrane protein, putative [Brucella abortus bv. 9 str. C68]
gi|256368582|ref|YP_003106088.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260169698|ref|ZP_05756509.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella sp.
F5/99]
gi|260546396|ref|ZP_05822136.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563195|ref|ZP_05833681.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567238|ref|ZP_05837708.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260755975|ref|ZP_05868323.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260759199|ref|ZP_05871547.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260884996|ref|ZP_05896610.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|261215250|ref|ZP_05929531.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|261218121|ref|ZP_05932402.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221348|ref|ZP_05935629.1| Omp25d [Brucella ceti B1/94]
gi|261314665|ref|ZP_05953862.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316777|ref|ZP_05955974.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321032|ref|ZP_05960229.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261759234|ref|ZP_06002943.1| outer membrane protein [Brucella sp. F5/99]
gi|265987848|ref|ZP_06100405.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|265992322|ref|ZP_06104879.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|265994064|ref|ZP_06106621.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|265997308|ref|ZP_06109865.1| Omp25d [Brucella ceti M490/95/1]
gi|297247515|ref|ZP_06931233.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|17983867|gb|AAL53011.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23346896|gb|AAN29074.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251245|gb|AAS84593.1| Omp25d [Brucella abortus]
gi|46251247|gb|AAS84594.1| Omp25d [Brucella ovis]
gi|46251249|gb|AAS84595.1| Omp25d [Brucella canis]
gi|46251253|gb|AAS84597.1| Omp25d [Brucella ceti]
gi|46251255|gb|AAS84598.1| Omp25d [Brucella ceti]
gi|46251257|gb|AAS84599.1| Omp25d [Brucella ceti]
gi|46251259|gb|AAS84600.1| Omp25d [Brucella pinnipedialis]
gi|62195231|gb|AAX73531.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615138|emb|CAJ10071.1| outer membrane protein, putative [Brucella melitensis biovar
Abortus 2308]
gi|148371121|gb|ABQ61100.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161334917|gb|ABX61222.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163673116|gb|ABY37227.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189018946|gb|ACD71668.1| outer membrane protein, putative [Brucella abortus S19]
gi|225618318|gb|EEH15361.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789428|gb|EEP63638.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|255998740|gb|ACU47139.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260096503|gb|EEW80379.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153211|gb|EEW88303.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156756|gb|EEW91836.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260669517|gb|EEX56457.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260676083|gb|EEX62904.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260874524|gb|EEX81593.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|260916857|gb|EEX83718.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260919932|gb|EEX86585.1| Omp25d [Brucella ceti B1/94]
gi|260923210|gb|EEX89778.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293722|gb|EEX97218.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296000|gb|EEX99496.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303691|gb|EEY07188.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739218|gb|EEY27214.1| outer membrane protein [Brucella sp. F5/99]
gi|262551776|gb|EEZ07766.1| Omp25d [Brucella ceti M490/95/1]
gi|262765045|gb|EEZ10966.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|263003388|gb|EEZ15681.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|264660045|gb|EEZ30306.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|297174684|gb|EFH34031.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
Length = 230
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHT 110
W+G Y G + + L + N T + PNG G+ G+N +F+ G++ +
Sbjct: 42 WAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGLDANV 100
Query: 111 ------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYV 156
T+ T + ++ G V +AGY++D + Y GG FGG
Sbjct: 101 DYNNLKKSRDFITSGNPVQTTGETQLRW--SGAVRARAGYAIDRFMPYIAGGVAFGG--- 155
Query: 157 IDSSLE--KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
I +SL ES SK G +G G+DY ++ L YRY +
Sbjct: 156 IKNSLRIGGEESSKSKTQTG--------WTVGAGIDYAATDNVLLRLEYRYTDY 201
>gi|254702337|ref|ZP_05164165.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704867|ref|ZP_05166695.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|254708278|ref|ZP_05170106.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|254710652|ref|ZP_05172463.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|254714835|ref|ZP_05176646.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|254717892|ref|ZP_05179703.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|256032146|ref|ZP_05445760.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256061667|ref|ZP_05451806.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|256160342|ref|ZP_05458035.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|256255546|ref|ZP_05461082.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
Length = 253
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 133 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 191
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H L
Sbjct: 192 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRL 247
Query: 237 GINMHF 242
G+N F
Sbjct: 248 GLNYKF 253
>gi|218461202|ref|ZP_03501293.1| outer membrane protein [Rhizobium etli Kim 5]
gi|218658675|ref|ZP_03514605.1| outer membrane protein [Rhizobium etli IE4771]
Length = 207
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 76/193 (39%), Gaps = 28/193 (14%)
Query: 54 WSGNYVGLH--ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI--NCH 109
WSG Y G+ + L + +N + G G+N Q ++FV GI N
Sbjct: 39 WSGPYFGIDGGAAWLNGDFSAGGASASEDFNGGVFGGF---AGYNFQFDNFVVGIEGNLE 95
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
++D+ + + G V + GY+ D LIYG G+ ++ V++
Sbjct: 96 HNWNEEDALGAEVGTDW--AGAVRGRVGYAFDKALIYGAAGWA------ATRGYVDAPGF 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
F+G+ +G G+D+ + +I YRY N + D+ VD
Sbjct: 148 DKETETFNGY----TVGAGVDFAITNNIFARGEYRY---------NDYGEQDILGVDVDL 194
Query: 230 NAHIASLGINMHF 242
+ H GI + F
Sbjct: 195 DQHELKFGIGVKF 207
>gi|189024724|ref|YP_001935492.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|254689800|ref|ZP_05153054.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 6 str. 870]
gi|254694291|ref|ZP_05156119.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 3 str. Tulya]
gi|254697943|ref|ZP_05159771.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 2 str. 86/8/59]
gi|254730834|ref|ZP_05189412.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 4 str. 292]
gi|256258053|ref|ZP_05463589.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 9 str. C68]
gi|189020296|gb|ACD73018.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
Length = 253
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 133 FVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 191
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H L
Sbjct: 192 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNINMENKVNFHTVRL 247
Query: 237 GINMHF 242
G+N F
Sbjct: 248 GLNYKF 253
>gi|158425587|ref|YP_001526879.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
gi|158332476|dbj|BAF89961.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
Length = 202
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 37/194 (19%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL--EDFVFGINC- 108
W+G YVG +I + + AD+ P G G++ G+N+Q+ V G+
Sbjct: 41 WTGFYVGGNIGYGWGSAG-ADS----------PKGFLGGLQAGYNLQMAGSPIVLGLETD 89
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
A +D + + Y G V +AG++ D +LIYG GF AY S + N
Sbjct: 90 FDWAGMNDGNY---SQDYI--GTVRARAGFAFDRVLIYGTAGF--AYG-KGSYQVFGLSN 141
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
S+ + G LG G +Y ++ + S A Y Y+ + NS + V +
Sbjct: 142 SQTSYGW--------ALGAGAEYAIDRNWSARAEYMYV-----DLGNSTYGTWVGPTNVS 188
Query: 229 GNAHIASLGINMHF 242
+ + G+N F
Sbjct: 189 YDTSVLRAGVNYRF 202
>gi|326920568|ref|XP_003206542.1| PREDICTED: regulator of G-protein signaling 6-like [Meleagris
gallopavo]
Length = 504
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFG 105
QDD+ G V +S++ AD + N S+ G I LG I + +VF
Sbjct: 37 QDDKTGGVPIRTVKSFLSKIPSVVTGADIVQWLMKNLSIEDQGEAIHLGSLIAAQGYVFP 96
Query: 106 INCHTTAAKDDSTFYRLKEKYF 127
I+ H KDD TFYR + YF
Sbjct: 97 ISDHVLTLKDDGTFYRFQAPYF 118
>gi|225851658|ref|YP_002731891.1| porin [Brucella melitensis ATCC 23457]
gi|256264831|ref|ZP_05467363.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|225640023|gb|ACN99936.1| porin [Brucella melitensis ATCC 23457]
gi|263095287|gb|EEZ18914.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|326408138|gb|ADZ65203.1| porin [Brucella melitensis M28]
gi|326537849|gb|ADZ86064.1| porin [Brucella melitensis M5-90]
Length = 230
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 33/172 (19%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHT 110
W+G Y G + + L + N T + PNG G+ G+N + F+ G++ +
Sbjct: 42 WAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNHFILGLDANV 100
Query: 111 ------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYV 156
T+ T + ++ G V +AGY++D + Y GG FGG
Sbjct: 101 DYNNLKKSRDFITSGNPVQTTGETQLRW--SGAVRARAGYAIDRFMPYIAGGVAFGG--- 155
Query: 157 IDSSLE--KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
I +SL ES SK G +G G+DY ++ L YRY
Sbjct: 156 IKNSLRIGGEESSKSKTQTG--------WTVGAGIDYAATDNVLLRLEYRYT 199
>gi|156381855|ref|XP_001632271.1| predicted protein [Nematostella vectensis]
gi|156219324|gb|EDO40208.1| predicted protein [Nematostella vectensis]
Length = 515
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 3 FNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNV-EYQ--DDEYGIWSGNYV 59
F+GY LF ++ + N L+ L+LP + + AD +V E Q D++ + N
Sbjct: 189 FDGYKCLFELIKVLRTAENADLSETLHLPTCLKTWLGADKSVDEVQSVDEDTVKSTANQS 248
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+ +L+ P+ D R +++LP+ ++G + L++++
Sbjct: 249 VSLLDKLFAESPVTDNKPRAKSSTMLPSSDSNDVGEVVSLDEYM 292
>gi|313661362|ref|NP_001186381.1| regulator of G-protein signaling 6 [Gallus gallus]
Length = 472
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFG 105
QDD+ G V +S++ AD + N S+ G I LG I + +VF
Sbjct: 37 QDDKTGGVPIRTVKSFLSKIPSVVTGADIVQWLMKNLSIEDQGEAIHLGSLIAAQGYVFP 96
Query: 106 INCHTTAAKDDSTFYRLKEKYF 127
I+ H KDD TFYR + YF
Sbjct: 97 ISDHVLTLKDDGTFYRFQAPYF 118
>gi|254719645|ref|ZP_05181456.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|306837721|ref|ZP_07470589.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|306407177|gb|EFM63388.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 253
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 133 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 191
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H +
Sbjct: 192 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNVNMENKVNFHTVRI 247
Query: 237 GINMHF 242
G+N F
Sbjct: 248 GLNYKF 253
>gi|316932343|ref|YP_004107325.1| porin [Rhodopseudomonas palustris DX-1]
gi|315600057|gb|ADU42592.1| porin [Rhodopseudomonas palustris DX-1]
Length = 448
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 21/202 (10%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKT--YNSLLPNGL--GIELGHNIQLEDFVFGINC- 108
W+G Y+G + + TI T +N L P+G G ++G+N Q ++VFG+
Sbjct: 247 WAGLYIGGNFGGATARDRSSVTIAGVTDAFN-LAPDGFFGGGQIGYNWQAVNWVFGVEAD 305
Query: 109 --------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
A + FY K +F G + GYS+ S L YG G+ +
Sbjct: 306 FQGSTLKDQRAAVLGPAVFYDAKLPWF--GTARGRIGYSLGSTLFYGTAGYAYGNIKTDI 363
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + + + K KG + G+ + L ++ + + Y Y+ + S ++ +
Sbjct: 364 VSAIGNYSFKTTKGGWA-AGAGIETPFQLFGLLGPNWTSKTEYLYV--DLGSTTDAFGAT 420
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ K H GIN HF
Sbjct: 421 GINTT--KVTQHTLRTGINYHF 440
>gi|265984654|ref|ZP_06097389.1| outer membrane protein 31b [Brucella sp. 83/13]
gi|264663246|gb|EEZ33507.1| outer membrane protein 31b [Brucella sp. 83/13]
Length = 261
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 141 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 199
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H +
Sbjct: 200 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNVNMENKVNFHTVRI 255
Query: 237 GINMHF 242
G+N F
Sbjct: 256 GLNYKF 261
>gi|86751713|ref|YP_488209.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86574741|gb|ABD09298.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 449
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINC--H 109
W+G Y+G + + ++ +L P+G G ++G+N Q ++VFG
Sbjct: 248 WAGLYLGGNFGGATARNRTTSSVIFSENFNLSPDGFVGGGQIGYNWQASNWVFGAEADFQ 307
Query: 110 TTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+ KDD S+ +K +G + GY+V S L Y GG+
Sbjct: 308 GSTQKDDRAAVLSSLLLYNQKLPWFGTARARLGYTVGSTLFYATGGY 354
>gi|306843011|ref|ZP_07475638.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306844622|ref|ZP_07477209.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275066|gb|EFM56829.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306286803|gb|EFM58344.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 253
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 120 YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRF 176
+ L+ K +G V + G++ + L++YG GG +G S+ + ES ++ N+K +
Sbjct: 133 FGLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLSAYDDGESFSAGNSKTK- 191
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG G++Y V + +L + Y Y S N + ++ ++ K N H +
Sbjct: 192 ----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEENVNVNMENKVNFHTVRI 247
Query: 237 GINMHF 242
G+N F
Sbjct: 248 GLNYKF 253
>gi|75677151|ref|YP_319572.1| hypothetical protein Nwi_2970 [Nitrobacter winogradskyi Nb-255]
gi|74422021|gb|ABA06220.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 276
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 27/104 (25%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK------------- 114
+ PL T + + +G G LG+N+Q+ED VFG+ + T +K
Sbjct: 86 SSWPLGGTSSNRN------SGFGGFLGYNLQMEDVVFGVEANYTHSKFLGASSGSQGRSF 139
Query: 115 ------DDSTFYRLKEKYFI--YGDVVLKAGYSVDSLLIYGMGG 150
S F + I +G + ++AGYS+ S L Y GG
Sbjct: 140 SYPADYRTSAFVQSNASMQIMDFGSLRVRAGYSLGSFLPYAFGG 183
>gi|296448558|ref|ZP_06890432.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
gi|296253924|gb|EFH01077.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
Length = 482
Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 23/165 (13%)
Query: 54 WSGNYVGLHISRLY---ETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINC 108
W G YVG + + P N S G+ G+ G+N QL V G+
Sbjct: 288 WRGVYVGFDVGHAWGHDRFVPYYSVPNVGAPQSFDLTGVIGGLHAGYNWQLASVVLGVET 347
Query: 109 HTTAAKDDSTFYR-----LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
A + T + L+ + G + + G++ D LL++G GG A V
Sbjct: 348 EFDATSLNRTVQQDAVTTLRSSSALQGSIRARFGWAFDRLLVFGTGGSQWAGV------- 400
Query: 164 VESDNSKNAKGRFDGHGS---SVVLGIGLDYMVNYDISLSASYRY 205
N+ + +G D + + S V+G G++Y + A YR+
Sbjct: 401 ---QNAYHIRGLGDSYSTNHHSWVVGGGIEYALTDHWLGRAEYRF 442
>gi|86749064|ref|YP_485560.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572092|gb|ABD06649.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 254
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 87/228 (38%), Gaps = 56/228 (24%)
Query: 54 WSGNYVGLHISRLY--ETHPLADTINRKTYNSLLPNGL-----------GIELGHNIQLE 100
W+G YVG H+ + ET A ++ + N + P G G++ G+N Q++
Sbjct: 44 WTGLYVGGHLGGGWVDET---ATFVSSTSINLIDPLGTSYPIDHSGFLGGVQAGYNYQIQ 100
Query: 101 DFVFGI--NCHTTAAKDDSTFYRL---------KEKYFIYGDVVLKAGYSVDSLLIYGMG 149
++V GI + T+AK D+ L + K Y + GY+ +LL YG G
Sbjct: 101 NWVIGIAGDFSWTSAKVDTVTASLLVPGAQVHTQAKTDWYATATGRVGYAFGNLLAYGKG 160
Query: 150 G-------------FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
G FG A ++ SD + G +G+GL++
Sbjct: 161 GAAWIHSVHGGFADFGAAGIVP------FSDVTTTRAGW--------TVGVGLEWAFAPH 206
Query: 197 ISLSASYRYIPHHIHSVNNSNAK--SDVERVDRKGNAHIASLGINMHF 242
S+ Y Y+ + +N D K + + G+N F
Sbjct: 207 WSVFGEYNYMDFGTRTYTFTNLADGGSTSNFDVKTSVSLVKAGVNYRF 254
>gi|306844392|ref|ZP_07476982.1| outer membrane protein [Brucella sp. BO1]
gi|306275205|gb|EFM56955.1| outer membrane protein [Brucella sp. BO1]
Length = 230
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 33/174 (18%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHT 110
W+G Y G + + L + N T + PNG G+ G+N +F+ G++ +
Sbjct: 42 WAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGLDANV 100
Query: 111 ------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYV 156
T T + ++ G V +AGY++D + Y GG FGG
Sbjct: 101 DYNNLKKSRDFITNGNPVQTTGETQLRW--SGAVRARAGYAIDRFMPYIAGGVAFGG--- 155
Query: 157 IDSSLE--KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
I +SL ES SK G +G G+DY ++ L YRY +
Sbjct: 156 IKNSLRIGGEESSKSKTQTG--------WTVGAGIDYAATDNVLLRLEYRYTDY 201
>gi|27380621|ref|NP_772150.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353786|dbj|BAC50775.1| outer-membrane immunogenic protein precursor [Bradyrhizobium
japonicum USDA 110]
Length = 237
Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 14/117 (11%)
Query: 130 GDVVLKAGYSVDSLLIYGMGGF----GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
G V + GY+ L+Y GG+ GG V + + + + N G +
Sbjct: 121 GSVTGRIGYTWGPALVYAKGGYAWRNGGLGVNVAGVPQGFTATGNNKDG--------YTV 172
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G GL+YM S A Y+Y ++ S ++ +D+ V + + H +G+N F
Sbjct: 173 GAGLEYMFAPSWSAKAEYQY--YNFGSTTFTSGPADIVGVRGREDEHTVKVGVNYRF 227
>gi|291406830|ref|XP_002719635.1| PREDICTED: regulator of G-protein signalling 6 [Oryctolagus
cuniculus]
Length = 492
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
G I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 68 GEAIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 107
>gi|254720536|ref|ZP_05182347.1| outer membrane protein Omp31 precursor [Brucella sp. 83/13]
gi|265985569|ref|ZP_06098304.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838097|ref|ZP_07470954.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
gi|264664161|gb|EEZ34422.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306406834|gb|EFM63056.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
Length = 240
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLA--DTI-NRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + DT N + SL G G++ G+N QL+
Sbjct: 40 WTGGYIGINAGYAGGKFKHPFSTFDTEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGGV 99
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 100 LGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 159
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S SD +K + LG G +Y +N + +L + Y Y
Sbjct: 160 KVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 209
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 210 LGKRNLVDVDNSFLESKV-------NFHTVRIGLNYKF 240
>gi|148258633|ref|YP_001243218.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|146410806|gb|ABQ39312.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1]
Length = 710
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 40/231 (17%)
Query: 32 RKIDLFNEADNNV-EYQDDEYGIWSGNYVGLHIS----RLYE-THPLADTINRKTYNSLL 85
R++D+ +AD E + W+G YVG H RL + +HP + + +
Sbjct: 69 RRLDVRTKADRPPSEAEMKRVYDWTGFYVGGHFGYGGGRLGDDSHPKPE---QGVFLPHS 125
Query: 86 PNGL--GIELGHNIQLED-FVFGINCHT--TAAKDDSTFYRLKEKYFI--YGDVVLKAGY 138
P GL G ++G+N QL + V G+ T+ D+ + G + GY
Sbjct: 126 PTGLIGGFQVGYNRQLANHLVLGVEADASFTSPTDEPALAPSPFNSTVDYVGTARGRVGY 185
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK-GRFDGHGSSVVLGIGLDYMVNYDI 197
+ D + Y GGF + +E ++ A+ GR+ + G+G ++ V+ +
Sbjct: 186 AFDRWMPYVTGGFAWGH------GHIEVNDGSGAQLGRYQ---TGWTAGLGAEFAVSGNW 236
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA------HIASLGINMHF 242
+ Y Y VN S A D+ R D NA H+A +G+N HF
Sbjct: 237 TAKVEYDY-------VNLSAATYDLGRFDLP-NARLAPGLHLAKIGLNYHF 279
>gi|227821495|ref|YP_002825465.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340494|gb|ACP24712.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
Length = 212
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 17/163 (10%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
EY + WSG YVG + Y AD N + G G+ G+N+Q V
Sbjct: 36 AEYTEPAVKNWSGAYVGGTANWHYGE---ADATGN---NKSVAFGGGLYGGYNVQDGQMV 89
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+G A +DST K K + G + + G ++ +L+YG G + ++ L
Sbjct: 90 YGGEADVNYAGNDSTSSGRKVKQGVNGSLRGRVGVDMNPVLVYGTAGLA---LGNAKLST 146
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ K G G G + V +++ YRY
Sbjct: 147 PAGSDDKTLVGW--------TAGAGAETFVTDNVTARVEYRYT 181
>gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4]
gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 42/234 (17%)
Query: 15 LSIVVPNHSLAVDLYLPRK---IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
LS+V H+ + +P +D+ N W+G YVG +
Sbjct: 15 LSLVTGAHAADAVMSVPEAPAAVDMPAPVSN-----------WAGAYVGGAGTY------ 57
Query: 72 LADTINRKTYNSLLPNGLGIEL--GHNIQLEDFVFGINCHTTAAKDDS-TFYRLKEKYFI 128
T+ R + G ++ G+N+Q + V+G + S + L K +
Sbjct: 58 ---TMGRSHGSKFSARAFGGQVYGGYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGKQGV 114
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY ++ ++YG G A D+ + +SK A G +G G
Sbjct: 115 NGSIRGRVGYDLNPFMVYGTAGVAAA---DTKISGAGGSDSKAALG--------YTVGAG 163
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ MV +I+ YRY + N +K V R + +GI M F
Sbjct: 164 VEAMVTNNITTRVEYRYTDYQNKDYNIGGSK-----VSRGFDDQSVKVGIGMKF 212
>gi|110633591|ref|YP_673799.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110284575|gb|ABG62634.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 234
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDD-----------STFYRLKEKYFIYGDVVLKAGY 138
G ++G++ Q+ ++V G A D S K KY G V +AGY
Sbjct: 83 GAQVGYDWQIGNWVIGGVADIAATNHDADISADIDGFGSAEAESKLKYL--GTVRARAGY 140
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK---NAKGRFDGHGSSVVLGIGLDYMVNY 195
S D L+YG GGF AY + +K++ ++ ++GR + G G+++ V
Sbjct: 141 SFDRTLVYGHGGF--AY--GETEQKIDLGGTELFNESQGR-----TGWTAGAGVEFAVTN 191
Query: 196 DISLSASYRYI 206
IS+ Y Y+
Sbjct: 192 RISVGTEYSYV 202
>gi|222149200|ref|YP_002550157.1| outer membrane protein [Agrobacterium vitis S4]
gi|221736185|gb|ACM37148.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 25/151 (16%)
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
++GHN+ + G+ +++ + +K + G +AGY++D LI+ GG+
Sbjct: 87 DVGHNV-----ILGVEADVNYDWNENNYSGVKVGMDVSGSARARAGYAIDRALIFVAGGW 141
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ K++ G F+ + +G G+DY + I YRY
Sbjct: 142 -----------TADRTYIKSSSGDFNKTLNGWTIGAGVDYAITNRIFTRLEYRY------ 184
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N ++ +D ++ +LGI + F
Sbjct: 185 ---NDYGTKNISGIDFDSKQNVVNLGIGIKF 212
>gi|39933882|ref|NP_946158.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192289301|ref|YP_001989906.1| porin [Rhodopseudomonas palustris TIE-1]
gi|39647729|emb|CAE26249.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192283050|gb|ACE99430.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 449
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 32/208 (15%)
Query: 54 WSGNYVGLHI--------SRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFV 103
W+G Y+G + S L DT N L P+G G ++G+N Q ++V
Sbjct: 247 WAGLYIGGNFGGATGRDRSSLTLGGGQTDTFN------LAPDGFIGGGQIGYNWQASNWV 300
Query: 104 FGINC--HTTAAKDDST-------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
FG+ + KD +Y K +F G + GYS+ S L YG G+
Sbjct: 301 FGVEADFQGSTQKDQRASVLGPRAYYDAKLPWF--GTARGRIGYSLGSTLFYGTAGYAYG 358
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + + + + K KG + G+ + L ++ + + Y Y+ + S
Sbjct: 359 NIKSDIVSSIGNYSFKTTKGGWA-AGAGIETPFQLFGLLGPNWTSKTEYLYV--DLGSTT 415
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + K HI GIN HF
Sbjct: 416 DVFGGTGINTT--KVTEHILRTGINYHF 441
>gi|300024536|ref|YP_003757147.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526357|gb|ADJ24826.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 232
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 25/170 (14%)
Query: 54 WSGNYVGLHISRLY----ETHPLADTINRKTYNSLL---PNGL--GIELGHNIQLEDFVF 104
W+G Y+G H+ + T D N + P G+ G+ G+N+QL + V
Sbjct: 25 WTGPYIGAHVGGAWGNASTTDDPRDWGNDPKFIGPFDQNPVGVIAGLTAGYNVQLSNIVL 84
Query: 105 GI----------NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGG 153
G+ + T + + IYG V +AG+ + S L+YG GGF
Sbjct: 85 GVEGDIGYLGLDSALDTPSSQSGNHQSIVLDSGIYGAVTARAGFLATPSTLVYGKGGF-A 143
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y D++ + G F G V G G++ + ++S+ Y
Sbjct: 144 FYNGDATQSTTADGYVFHGTGTFTGW----VAGGGIEQRLTDNLSIKVEY 189
>gi|17989189|ref|NP_541822.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|17985044|gb|AAL54086.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 219
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLAD---TINRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + N + SL G G++ G+N QL+
Sbjct: 19 WTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVV 78
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 79 LGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 138
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S SD +K + LG G +Y +N + +L + Y Y
Sbjct: 139 KVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 188
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 189 LGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 219
>gi|312115943|ref|YP_004013539.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221072|gb|ADP72440.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 291
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 52/214 (24%)
Query: 54 WSGNYVGLHISRLY---ETH--------PLADTINRKTYN--SLLPNGLGI-------EL 93
W+G YVG H+ + ET PL + Y+ + NGLG +
Sbjct: 48 WTGFYVGGHLGAAWTNLETRRNTYWDRDPLPTGVAAAPYDYSTFGGNGLGTTGAFGGGQF 107
Query: 94 GHNIQLE-DFVFGI----------NCHTTAAK----------DDSTFYRLKEKYFIYGDV 132
G+N Q +FV GI N T AA D +K + IYGDV
Sbjct: 108 GYNWQTGGNFVLGIEVDVGGLQGDNERTFAAATYDGPALDAIDHIAVVNVKSQGGIYGDV 167
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYV-----IDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+ GY+ + L+Y GGF A++ + +++ ++ + + FD + G
Sbjct: 168 TGRLGYAWGNTLLYLKGGF--AWLATDLKVRAAITDIDGETDYYNR-SFDNTLTGWTAGG 224
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
GL+Y N + ++ Y H S++++N + D
Sbjct: 225 GLEYQFNPNWTMKVEYL---HFDFSLDDNNWRWD 255
>gi|307942791|ref|ZP_07658136.1| porin [Roseibium sp. TrichSKD4]
gi|307773587|gb|EFO32803.1| porin [Roseibium sp. TrichSKD4]
Length = 183
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 36/189 (19%)
Query: 48 DDEYGIWSGNYVGLHI--SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
+ E W G Y+G H + + L D I + +S++ G G+N F+ G
Sbjct: 6 EPETNSWQGFYIGGHFGYNWMNGQDDLDDGIGTTSLSSVIG---GFHAGYNHMFGQFLLG 62
Query: 106 I---------NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ N T D S+ + I G V +AGY+ + L Y G +
Sbjct: 63 VEAEGNLSDLNGQTAGGLDASS------NWMIAGRV--RAGYAFEHFLAYATAGVS---M 111
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR--YIPHHIHSVN 214
D+SL + ++ + + +V+G GL+ V +IS Y+ ++ ++ N
Sbjct: 112 ADASLSGTKKSSNTH---------TGLVVGGGLEAFVTQNISARLEYQHHWLNEQSYNTN 162
Query: 215 NSNAKSDVE 223
N++ K D E
Sbjct: 163 NTDYKVDAE 171
>gi|297479885|ref|XP_002691097.1| PREDICTED: regulator of G-protein signaling 6 [Bos taurus]
gi|296483063|gb|DAA25178.1| regulator of G-protein signaling 6 [Bos taurus]
Length = 496
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + +VF I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYVFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|332529738|ref|ZP_08405692.1| OmpW [Hylemonella gracilis ATCC 19624]
gi|332040759|gb|EGI77131.1| OmpW [Hylemonella gracilis ATCC 19624]
Length = 247
Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 59/154 (38%), Gaps = 23/154 (14%)
Query: 84 LLPNGLGIELGH----NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG-DVVLKAGY 138
++ N + +EL IQL+ H AA+ D L KYF + DV L+
Sbjct: 83 MVTNNIAVELAAGIAPRIQLDIATDATGNHKNAAEADVQTPSLLAKYFFFTPDVKLRP-- 140
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV------VLGIGLDYM 192
G G YV + + KV D R G+ +SV V +G+ Y
Sbjct: 141 ---------YVGLGATYVRFTDV-KVHDDGPTGTIHRLAGYSASVDSTWAPVYNVGVSYK 190
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+N S+ S+ YIP S+ +VD
Sbjct: 191 LNEQWSIGTSFSYIPIDTKMTFKGPGASNASKVD 224
>gi|326410582|gb|ADZ67646.1| outer membrane protein Omp31 [Brucella melitensis M28]
Length = 229
Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLAD---TINRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + N + SL G G++ G+N QL+
Sbjct: 29 WTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVV 88
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 89 LGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 148
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S SD +K + LG G +Y +N + +L + Y Y
Sbjct: 149 KVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 198
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 199 LGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 229
>gi|323136250|ref|ZP_08071332.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
gi|322398324|gb|EFY00844.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
Length = 226
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 44/209 (21%)
Query: 53 IWSGNYVGLHISRLYET-HPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINC-- 108
+WSG YVG+H + + A+T+ L+ G+ G+N + F+ G+
Sbjct: 43 VWSGFYVGVHGGYAFSSFEDDANTLIGGADGGLI----GVTGGYNYMVTPQFLLGVEADF 98
Query: 109 -HTTAAKDDSTFYRLKEKYFIYGDVVLK--AGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
T +K ++ F+ + + + L+ AGYS+D L+Y GGF
Sbjct: 99 AFTGVSKSNAPFFGVIARGEVDDMFTLRGRAGYSIDRALLYVTGGFAA------------ 146
Query: 166 SDNSKNAKG------RFDGHGSSV----VLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
SKNA G F G+ ++ LG G++YM+ ++S Y I +
Sbjct: 147 ---SKNAIGLTTPFTGFYGYQATFQPGWALGAGVEYMITSNLSAKGEY------IFTSTG 197
Query: 216 SNAKSDVERVDRKGNAHIASL--GINMHF 242
S++ D + +S+ G+N HF
Sbjct: 198 SDSYFDFSPNALTSAVNTSSIKGGLNFHF 226
>gi|149025073|gb|EDL81440.1| rCG20857 [Rattus norvegicus]
Length = 395
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + +VF I+ H KDD TFYR + YF
Sbjct: 46 AIHLGSLIAAQGYVFPISDHVLTMKDDGTFYRFQAPYF 83
>gi|294853764|ref|ZP_06794436.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294819419|gb|EFG36419.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|326553873|gb|ADZ88512.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 223
Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLAD---TINRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + N + SL G G++ G+N QL+
Sbjct: 23 WTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVV 82
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 83 LGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 142
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S SD +K + LG G +Y +N + +L + Y Y
Sbjct: 143 KVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 192
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 193 LGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 223
>gi|297459743|ref|XP_595717.5| PREDICTED: regulator of G-protein signaling 6 [Bos taurus]
Length = 650
Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + +VF I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYVFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|39936434|ref|NP_948710.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39650289|emb|CAE28812.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 240
Score = 35.8 bits (81), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 27/200 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTA 112
W+G YVG H+ + N T NS G G++ G + Q ++V GI +
Sbjct: 47 WTGFYVGGHVGGAWAGD------NNITGNSGRFFG-GVQGGADYQFATNWVIGIEAQYSW 99
Query: 113 AKDDSTFY------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY----VIDSSLE 162
++T E G V + GY+ L+Y GG+ A+ + +SL
Sbjct: 100 MSSNNTGVIFPGGSTATEDTRGLGSVTGRLGYAWGPTLVYAKGGY--AWRDSDLSVASLG 157
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
V S + + R DG+ +G GL+YM S Y+Y + + +DV
Sbjct: 158 GVPSGYTTSGS-RNDGY----TVGAGLEYMFAPSWSAKVEYQY--YKFGDTTFTGGPADV 210
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + H GIN F
Sbjct: 211 VGTSFRNDEHTVKAGINYRF 230
>gi|71023845|ref|XP_762152.1| hypothetical protein UM06005.1 [Ustilago maydis 521]
gi|46101744|gb|EAK86977.1| hypothetical protein UM06005.1 [Ustilago maydis 521]
Length = 3175
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 141 DSLLIYG---MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
DSL+ YG + Y +D + K D GR DGH SV+LG DYMV
Sbjct: 2256 DSLIEYGDLALAAQRARYSMDHLIAKTSGDGIVTGFGRIDGHTVSVILG---DYMV---- 2308
Query: 198 SLSASYRYIPHHI 210
L+ + Y+ HH+
Sbjct: 2309 -LAGTQGYL-HHL 2319
>gi|241518381|ref|YP_002979009.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862794|gb|ACS60458.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 207
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 28/193 (14%)
Query: 54 WSGNYVGLH--ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y+G+ L + +N + G +G+N Q ++ V GI +
Sbjct: 39 WSGPYLGIDGGAGWLNGDFSAGGASASEDFNGGIFGGF---VGYNFQFDNIVVGIEGNLE 95
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG--AYVIDSSLEKVESDNS 169
++ G V + GY+ D LIYG G+ YV L+K E++
Sbjct: 96 HNWNEEEALGADVGTDWTGAVRGRVGYAFDKALIYGAAGWTATRGYVDLPGLDK-ETET- 153
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
F+G+ +G GLD+ + +I YRY N + DV VD
Sbjct: 154 ------FNGY----TVGAGLDFAITNNIFARGEYRY---------NDFGEKDVLGVDVDL 194
Query: 230 NAHIASLGINMHF 242
+ H GI + F
Sbjct: 195 DQHELKFGIGVKF 207
>gi|192292221|ref|YP_001992826.1| porin [Rhodopseudomonas palustris TIE-1]
gi|192285970|gb|ACF02351.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 240
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 27/200 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTA 112
W+G YVG H+ + N T NS G G++ G + Q ++V GI +
Sbjct: 47 WTGFYVGGHVGGAWAGD------NNITGNSGRFFG-GVQGGADYQFATNWVIGIEAQYSW 99
Query: 113 AKDDSTFY------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY----VIDSSLE 162
++T E G V + GY+ L+Y GG+ A+ + +SL
Sbjct: 100 MSSNNTGVIFPGGSTATEDTRGLGSVTGRLGYAWGPTLVYAKGGY--AWRDSDLSVASLG 157
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
V S + + R DG+ +G GL+YM S Y+Y + + +DV
Sbjct: 158 GVPSGYTASGS-RNDGY----TVGAGLEYMFAPSWSAKVEYQY--YKFGDTTFTGGPADV 210
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + H GIN F
Sbjct: 211 VGTSFRNDEHTVKAGINYRF 230
>gi|119385805|ref|YP_916860.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
gi|119376400|gb|ABL71164.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
Length = 203
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 53 IWSGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC-- 108
W+G Y G+ +S +D ++NR + GI G+N QL + V G
Sbjct: 46 TWTGFYAGMQMS-------YSDFSVNRDGVDDATGGVYGIHAGYNHQLHNNMVIGGEITF 98
Query: 109 -HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
H++A D RL V K GY+ ++ L+YG+ G+ V ++
Sbjct: 99 DHSSADNDVWQVERLMT-------VRAKVGYAHNNWLVYGLAGY----------AHVRTE 141
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ A G+ G V GIG DY V+
Sbjct: 142 GADRAHGKSGG----AVFGIGADYAVS 164
>gi|256111680|ref|ZP_05452664.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 3
str. Ether]
gi|265993151|ref|ZP_06105708.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|16611648|gb|AAL27285.1|AF366062_1 outer membrane protein Omp31 [Brucella melitensis]
gi|262764021|gb|EEZ10053.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
Length = 240
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLAD---TINRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + N + SL G G++ G+N QL+
Sbjct: 40 WTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVV 99
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 100 LGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 159
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S + SD +K + LG G +Y +N + +L + Y Y
Sbjct: 160 KVKSAFNLGDDASALHMWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 209
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 210 LGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 240
>gi|293360032|ref|XP_001063200.2| PREDICTED: regulator of G-protein signaling 6 [Rattus norvegicus]
Length = 470
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + +VF I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYVFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|109479608|ref|XP_001056086.1| PREDICTED: regulator of G-protein signaling 6 isoform 1 [Rattus
norvegicus]
Length = 472
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + +VF I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYVFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|86748303|ref|YP_484799.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86571331|gb|ABD05888.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 207
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 20/115 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGI--NCH 109
W+G Y+G + L T N P+G G++ G+N Q + VFG+ +
Sbjct: 44 WAGPYLGGN---------LGYAFGNVTNNITKPSGFSGGVQGGYNWQSGNIVFGLEGDIQ 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FG---GAYVIDS 159
+ A D Y+ +F G + GY+++ +L+Y GG FG G Y++ S
Sbjct: 95 FSTANDTFASYKFSNPWF--GTARGRVGYAMNDILLYATGGLAFGQLKGEYLLSS 147
>gi|229620416|gb|ACQ84164.1| Omp31 [Brucella melitensis]
Length = 240
Score = 35.4 bits (80), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLAD---TINRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + N + SL G G++ G+N QL+
Sbjct: 40 WTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVV 99
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 100 LGAGTDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 159
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S SD +K + LG G +Y +N + +L + Y Y
Sbjct: 160 KVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 209
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 210 LGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 240
>gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 210
Score = 35.4 bits (80), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 13/123 (10%)
Query: 88 GLGIE--LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
G G E G+N Q V+G+ A DST L K + G V + GY + ++
Sbjct: 70 GFGGEAFTGYNWQQGQIVYGVEADLGYAGIDSTRNGLTAKNGVNGSVRGRLGYDFNPFML 129
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
YG G + + L S +SK A G +G G + + +++ YRY
Sbjct: 130 YGTAGLA---IGQNKLSDDTSSDSKTAVG--------YTVGAGAETFITNNVTARLEYRY 178
Query: 206 IPH 208
+
Sbjct: 179 TDY 181
>gi|89055673|ref|YP_511124.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88865222|gb|ABD56099.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 196
Score = 35.4 bits (80), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 41/200 (20%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL--GHNIQLED-FVFGINC-- 108
W+G Y G + T+ ++ + T + L G G G+N D FV G
Sbjct: 27 WTGFYAG------FATNIISPEFDNSTATTPLQEGTGFGAYGGYNYAFGDNFVVGAELGF 80
Query: 109 ------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
TT +D F R+ + ++ GY++ + L+YG G+ +
Sbjct: 81 SGPATFQTTLGANDFEFERVL-------NARVRGGYAMGNALVYGTLGY----------Q 123
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
VE S +G +V GIGL+ ++N +S+ Y H S
Sbjct: 124 TVEYGASAGVS--TEGAADGLVYGIGLEMLLNDQVSVRLDYTST-HMTPDAGTIIGGSAG 180
Query: 223 ERVDRKGNAHIASLGINMHF 242
E++D A+ LG+ +HF
Sbjct: 181 EQID----ANAVGLGVALHF 196
>gi|23500173|ref|NP_699613.1| outer membrane protein [Brucella suis 1330]
gi|225628865|ref|ZP_03786899.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225686232|ref|YP_002734204.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|254699679|ref|ZP_05161507.1| outer membrane protein Omp31 precursor [Brucella suis bv. 5 str.
513]
gi|254702817|ref|ZP_05164645.1| outer membrane protein Omp31 precursor [Brucella suis bv. 3 str.
686]
gi|254711636|ref|ZP_05173447.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
B2/94]
gi|254712249|ref|ZP_05174060.1| outer membrane protein Omp31 precursor [Brucella ceti M644/93/1]
gi|254715320|ref|ZP_05177131.1| outer membrane protein Omp31 precursor [Brucella ceti M13/05/1]
gi|256015206|ref|YP_003105215.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|256029730|ref|ZP_05443344.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
M292/94/1]
gi|256043319|ref|ZP_05446254.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 1
str. Rev.1]
gi|256059364|ref|ZP_05449566.1| outer membrane protein Omp31 precursor [Brucella neotomae 5K33]
gi|256157882|ref|ZP_05455800.1| outer membrane protein Omp31 precursor [Brucella ceti M490/95/1]
gi|256253156|ref|ZP_05458692.1| outer membrane protein Omp31 precursor [Brucella ceti B1/94]
gi|256262636|ref|ZP_05465168.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|260167181|ref|ZP_05753992.1| outer membrane protein, 31 kDa [Brucella sp. F5/99]
gi|260564527|ref|ZP_05835012.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|261217050|ref|ZP_05931331.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261220262|ref|ZP_05934543.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261319260|ref|ZP_05958457.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261319920|ref|ZP_05959117.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261323324|ref|ZP_05962521.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261750144|ref|ZP_05993853.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261753417|ref|ZP_05997126.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261756585|ref|ZP_06000294.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265986741|ref|ZP_06099298.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265989742|ref|ZP_06102299.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265996391|ref|ZP_06108948.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|61229373|sp|P0A3U4|OM31_BRUME RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|61229374|sp|P0A3U5|OM31_BRUSU RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|16611645|gb|AAL27284.1|AF366061_1 outer membrane protein Omp31 [Brucella melitensis]
gi|16611651|gb|AAL27286.1|AF366063_1 outer membrane protein Omp31 [Brucella suis 1330]
gi|16611657|gb|AAL27288.1|AF366065_1 outer membrane protein Omp31 [Brucella suis]
gi|16611663|gb|AAL27290.1|AF366067_1 outer membrane protein Omp31 [Brucella suis]
gi|16611684|gb|AAL27297.1|AF366074_1 outer membrane protein Omp31 [Brucella neotomae]
gi|1457933|gb|AAB36693.1| outer membrane protein [Brucella melitensis]
gi|23463773|gb|AAN33618.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251186|gb|AAS84564.1| Omp31 [Brucella ceti]
gi|46251188|gb|AAS84565.1| Omp31 [Brucella pinnipedialis]
gi|46251190|gb|AAS84566.1| Omp31 [Brucella ceti]
gi|46251192|gb|AAS84567.1| Omp31 [Brucella ceti]
gi|157310315|emb|CAN43870.1| outer membrane protein 31 [Brucella microti CCM 4915]
gi|157310317|emb|CAN43872.1| outer membrane protein 31 [Brucella microti]
gi|225616711|gb|EEH13759.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225642337|gb|ACO02250.1| outer membrane protein Omp31 precursor [Brucella melitensis ATCC
23457]
gi|226433917|gb|ACO56077.1| Omp31 [Brucella melitensis]
gi|240265888|gb|ACS50328.1| Omp31 [Brucella melitensis]
gi|255997866|gb|ACU49553.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|260152170|gb|EEW87263.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|260918846|gb|EEX85499.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260922139|gb|EEX88707.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261292610|gb|EEX96106.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261298483|gb|EEY01980.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261299304|gb|EEY02801.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261736569|gb|EEY24565.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261739897|gb|EEY27823.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261743170|gb|EEY31096.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262550688|gb|EEZ06849.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|263000411|gb|EEZ13101.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092421|gb|EEZ16674.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|264658938|gb|EEZ29199.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 240
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLAD---TINRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + N + SL G G++ G+N QL+
Sbjct: 40 WTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVV 99
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 100 LGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 159
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S SD +K + LG G +Y +N + +L + Y Y
Sbjct: 160 KVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 209
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 210 LGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 240
>gi|260568272|ref|ZP_05838741.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
gi|16611660|gb|AAL27289.1|AF366066_1 outer membrane protein Omp31 [Brucella suis]
gi|260154937|gb|EEW90018.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
Length = 240
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 54 WSGNYVGLHISRLYET--HPLAD---TINRKTYNSL--LPNGL--GIELGHNIQLE---- 100
W+G Y+G++ HP + N + SL G G++ G+N QL+
Sbjct: 40 WTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDATAGGFVGGVQAGYNWQLDNGVV 99
Query: 101 -----DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGA 154
DF + +A + + K +G V + GY+ + L++YG GG
Sbjct: 100 LGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYG 159
Query: 155 YVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI- 206
V D+S SD +K + LG G +Y +N + +L + Y Y
Sbjct: 160 KVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYAINNNWTLKSEYLYTD 209
Query: 207 --PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ V+NS +S V N H +G+N F
Sbjct: 210 LGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 240
>gi|74228135|dbj|BAE23955.1| unnamed protein product [Mus musculus]
Length = 368
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|332229051|ref|XP_003263701.1| PREDICTED: regulator of G-protein signaling 6 isoform 6 [Nomascus
leucogenys]
Length = 467
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|297248917|ref|ZP_06932626.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|297174251|gb|EFH33607.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 176
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 37/173 (21%)
Query: 90 GIELGHNIQLE---------DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS- 139
G++ G+N QL+ DF + +A + + K +G V + GY+
Sbjct: 21 GVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTA 80
Query: 140 VDSLLIYGMGGFGGAYVI-------DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+ L++YG GG V D+S SD +K + LG G +Y
Sbjct: 81 TERLMVYGTGGLAYGKVKSAFNLGDDASALHTWSDKTK----------AGWTLGAGAEYA 130
Query: 193 VNYDISLSASYRYI---PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+N + +L + Y Y ++ V+NS +S V N H +G+N F
Sbjct: 131 INNNWTLKSEYLYTDLGKRNLVDVDNSFLESKV-------NFHTVRVGLNYKF 176
>gi|148670784|gb|EDL02731.1| mCG7891 [Mus musculus]
Length = 402
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 53 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 90
>gi|197099920|ref|NP_001125452.1| regulator of G-protein signaling 6 [Pongo abelii]
gi|55728089|emb|CAH90795.1| hypothetical protein [Pongo abelii]
Length = 472
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|118581633|ref|YP_902883.1| OmpA domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118504343|gb|ABL00826.1| OmpA domain protein transmembrane region-containing protein
[Pelobacter propionicus DSM 2379]
Length = 230
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 27/138 (19%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTF-------------YRLKEKYFIYGDVVLK 135
+G +G N+Q + GI + D + +R K V +
Sbjct: 66 IGGTMGANLQFFAYQGGIPAVVGGVESDFDWADLGDDGPCPNPRFRAKSSIDALATVRGR 125
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVE--------SDNSKNAKGRFDGHGSSVVLGI 187
G + D L I+G GG V + +E V+ S +KN +G++ + V+G+
Sbjct: 126 LGLAFDRLFIFGTGGLA---VAKTDVETVDTWGTSVPPSGTAKNGEGKWK---TGYVVGV 179
Query: 188 GLDYMVNYDISLSASYRY 205
G +Y V ++S Y+Y
Sbjct: 180 GAEYAVWKNLSFKVEYQY 197
>gi|332229045|ref|XP_003263698.1| PREDICTED: regulator of G-protein signaling 6 isoform 3 [Nomascus
leucogenys]
gi|332229053|ref|XP_003263702.1| PREDICTED: regulator of G-protein signaling 6 isoform 7 [Nomascus
leucogenys]
Length = 472
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|325053678|ref|NP_001191347.1| regulator of G-protein signaling 6 isoform 4 [Homo sapiens]
gi|332842770|ref|XP_001147060.2| PREDICTED: regulator of G-protein signaling 6 isoform 1 [Pan
troglodytes]
gi|119601473|gb|EAW81067.1| regulator of G-protein signalling 6, isoform CRA_f [Homo sapiens]
Length = 467
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|109084187|ref|XP_001084681.1| PREDICTED: regulator of G-protein signaling 6 isoform 3 [Macaca
mulatta]
gi|297298193|ref|XP_002805172.1| PREDICTED: regulator of G-protein signaling 6 [Macaca mulatta]
Length = 472
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|31742476|ref|NP_004287.3| regulator of G-protein signaling 6 isoform 2 [Homo sapiens]
gi|114653753|ref|XP_510041.2| PREDICTED: regulator of G-protein signalling 6 isoform 4 [Pan
troglodytes]
gi|114653755|ref|XP_001147432.1| PREDICTED: regulator of G-protein signaling 6 isoform 3 [Pan
troglodytes]
gi|215274268|sp|P49758|RGS6_HUMAN RecName: Full=Regulator of G-protein signaling 6; Short=RGS6;
AltName: Full=S914
gi|4972619|gb|AAD34718.1|AF107620_1 regulator of G-protein signaling-6 short isoform [Homo sapiens]
gi|5107939|gb|AAD40183.1|AF156932_1 G protein signaling 6 regulator [Homo sapiens]
gi|85397383|gb|AAI04878.1| Regulator of G-protein signaling 6 [Homo sapiens]
gi|109731744|gb|AAI13573.1| Regulator of G-protein signaling 6 [Homo sapiens]
gi|119601476|gb|EAW81070.1| regulator of G-protein signalling 6, isoform CRA_i [Homo sapiens]
gi|313883412|gb|ADR83192.1| regulator of G-protein signaling 6 (RGS6) [synthetic construct]
Length = 472
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|13471933|ref|NP_103500.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022677|dbj|BAB49286.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 220
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 36/155 (23%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V FL+ P LA D+ P F+ W+G Y G+ +
Sbjct: 6 LCSVAFLAAASP--VLAADIVEPVAAMPFS---------------WTGFYGGVQAGGGWN 48
Query: 69 THPLADTINRKTYNSLLPNG----LGIELGHNIQLEDFVFGI--NCHTTAAKDDS----- 117
+ T++S NG G ++G+N Q+ FV GI + + K D
Sbjct: 49 DSRWSGA----TFDSFNTNGSGGIFGGQIGYNYQINQFVIGIEGDLAGSTVKGDGQCSTA 104
Query: 118 --TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
T K+ Y G V + GY++D +LIYG G
Sbjct: 105 LGTTCETKQDYL--GSVRGRLGYAIDRILIYGDAG 137
>gi|332229049|ref|XP_003263700.1| PREDICTED: regulator of G-protein signaling 6 isoform 5 [Nomascus
leucogenys]
Length = 465
Score = 35.0 bits (79), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|19908833|gb|AAM03006.1| regulator of G protein signaling 6 beta [Homo sapiens]
Length = 465
Score = 35.0 bits (79), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|296215431|ref|XP_002754116.1| PREDICTED: regulator of G-protein signaling 6 isoform 2 [Callithrix
jacchus]
gi|296215433|ref|XP_002754117.1| PREDICTED: regulator of G-protein signaling 6 isoform 3 [Callithrix
jacchus]
Length = 472
Score = 35.0 bits (79), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|32250984|gb|AAP74386.1| RGS6 protein n isoform [Homo sapiens]
Length = 460
Score = 35.0 bits (79), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|189069233|dbj|BAG36265.1| unnamed protein product [Homo sapiens]
Length = 472
Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|332842766|ref|XP_001147276.2| PREDICTED: regulator of G-protein signaling 6 isoform 2 [Pan
troglodytes]
gi|119601474|gb|EAW81068.1| regulator of G-protein signalling 6, isoform CRA_g [Homo sapiens]
Length = 465
Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|18057198|gb|AAC26049.2| regulator of G-protein signaling 6 [Homo sapiens]
gi|19908836|gb|AAM03009.1| regulator of G protein signaling 6 alpha2 [Homo sapiens]
Length = 472
Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|19908837|gb|AAM03010.1| regulator of G protein signaling 6 gamma2 [Homo sapiens]
Length = 467
Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|332229041|ref|XP_003263696.1| PREDICTED: regulator of G-protein signaling 6 isoform 1 [Nomascus
leucogenys]
gi|332229047|ref|XP_003263699.1| PREDICTED: regulator of G-protein signaling 6 isoform 4 [Nomascus
leucogenys]
Length = 490
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|297298195|ref|XP_002805173.1| PREDICTED: regulator of G-protein signaling 6 [Macaca mulatta]
Length = 437
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 46 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 83
>gi|325053688|ref|NP_001191352.1| regulator of G-protein signaling 6 isoform 9 [Homo sapiens]
gi|332842764|ref|XP_003314499.1| PREDICTED: regulator of G-protein signaling 6 [Pan troglodytes]
gi|221040420|dbj|BAH11917.1| unnamed protein product [Homo sapiens]
Length = 437
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 46 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 83
>gi|159571762|emb|CAP19257.1| Regulator of G-protein signaling 6 [Mus musculus]
Length = 335
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|325053674|ref|NP_001191345.1| regulator of G-protein signaling 6 isoform 1 [Homo sapiens]
gi|325053690|ref|NP_001191353.1| regulator of G-protein signaling 6 isoform 1 [Homo sapiens]
gi|332842757|ref|XP_003314496.1| PREDICTED: regulator of G-protein signaling 6 [Pan troglodytes]
gi|4972617|gb|AAD34717.1|AF107619_1 regulator of G-protein signaling-6 [Homo sapiens]
gi|119601469|gb|EAW81063.1| regulator of G-protein signalling 6, isoform CRA_b [Homo sapiens]
Length = 490
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|73964265|ref|XP_537503.2| PREDICTED: similar to regulator of G-protein signaling 6 [Canis
familiaris]
Length = 683
Score = 35.0 bits (79), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 68 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 105
>gi|221040046|dbj|BAH11786.1| unnamed protein product [Homo sapiens]
Length = 490
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|109084185|ref|XP_001084557.1| PREDICTED: regulator of G-protein signaling 6 isoform 2 [Macaca
mulatta]
gi|297298190|ref|XP_002805171.1| PREDICTED: regulator of G-protein signaling 6 [Macaca mulatta]
Length = 490
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|29789076|ref|NP_056627.1| regulator of G-protein signaling 6 [Mus musculus]
gi|51704342|sp|Q9Z2H2|RGS6_MOUSE RecName: Full=Regulator of G-protein signaling 6; Short=RGS6
gi|26342739|dbj|BAC35026.1| unnamed protein product [Mus musculus]
gi|26343211|dbj|BAC35262.1| unnamed protein product [Mus musculus]
gi|115527483|gb|AAI25031.1| Regulator of G-protein signaling 6 [Mus musculus]
gi|115528993|gb|AAI25030.1| Regulator of G-protein signaling 6 [Mus musculus]
Length = 472
Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|332229059|ref|XP_003263705.1| PREDICTED: regulator of G-protein signaling 6 isoform 10 [Nomascus
leucogenys]
Length = 437
Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 46 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 83
>gi|332229043|ref|XP_003263697.1| PREDICTED: regulator of G-protein signaling 6 isoform 2 [Nomascus
leucogenys]
Length = 485
Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|313635353|gb|EFS01629.1| conserved hypothetical protein [Listeria seeligeri FSL N1-067]
Length = 337
Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTIN------RKTYNSLLPNGLGIELGHNIQ 98
E + E G WS N G+ I T+ + +IN +YNS NG + LG+ +
Sbjct: 184 ENSETEKGSWSINIPGISIPFGDTTNSMNTSINLTDKSITTSYNSNGKNGETVSLGYTLD 243
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA-----GYS-VDSLLIYGM 148
+ + + T+ S Y E YF + D+ +K GYS V SL I G+
Sbjct: 244 TKGGSYSMGSGVTSETGLSDMYTDTEDYFHWEDMPVKEILEALGYSVVGSLAIIGL 299
>gi|147903036|ref|NP_001079945.1| hypothetical protein LOC379636 [Xenopus laevis]
gi|34784597|gb|AAH57714.1| MGC68862 protein [Xenopus laevis]
Length = 471
Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFG 105
QDD+ G V +S++ AD + N ++ + I LG I + ++F
Sbjct: 36 QDDKAGGVPIRTVKSFLSKIPSVVTGADIVQWLVKNLIIEDPAEAIHLGSLIAAQGYIFP 95
Query: 106 INCHTTAAKDDSTFYRLKEKYF 127
I+ H KDD TFYR + YF
Sbjct: 96 ISDHVLTLKDDGTFYRFQAPYF 117
>gi|19908832|gb|AAM03005.1| regulator of G protein signaling 6 gamma1 [Homo sapiens]
Length = 485
Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|301769747|ref|XP_002920298.1| PREDICTED: regulator of G-protein signaling 6-like [Ailuropoda
melanoleuca]
Length = 516
Score = 35.0 bits (79), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|325053676|ref|NP_001191346.1| regulator of G-protein signaling 6 isoform 3 [Homo sapiens]
gi|332842768|ref|XP_003314500.1| PREDICTED: regulator of G-protein signaling 6 [Pan troglodytes]
gi|119601477|gb|EAW81071.1| regulator of G-protein signalling 6, isoform CRA_j [Homo sapiens]
Length = 485
Score = 35.0 bits (79), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|62088504|dbj|BAD92699.1| RGS6 protein epsilon isoform variant [Homo sapiens]
Length = 495
Score = 35.0 bits (79), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 86 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 123
>gi|19908831|gb|AAM03004.1| regulator of G protein signaling 6 alpha1 [Homo sapiens]
Length = 490
Score = 35.0 bits (79), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|32250992|gb|AAP74389.1| RGS6 protein epsilon isoform [Homo sapiens]
Length = 475
Score = 35.0 bits (79), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|296215429|ref|XP_002754115.1| PREDICTED: regulator of G-protein signaling 6 isoform 1 [Callithrix
jacchus]
Length = 490
Score = 35.0 bits (79), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|32250989|gb|AAP74388.1| RGS6 protein delta isoform [Homo sapiens]
Length = 477
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|332229057|ref|XP_003263704.1| PREDICTED: regulator of G-protein signaling 6 isoform 9 [Nomascus
leucogenys]
Length = 430
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|32250986|gb|AAP74387.1| RGS6 protein y isoform [Homo sapiens]
Length = 480
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|325053686|ref|NP_001191351.1| regulator of G-protein signaling 6 isoform 8 [Homo sapiens]
gi|332842774|ref|XP_003314503.1| PREDICTED: regulator of G-protein signaling 6 [Pan troglodytes]
gi|119601470|gb|EAW81064.1| regulator of G-protein signalling 6, isoform CRA_c [Homo sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|19908838|gb|AAM03011.1| regulator of G protein signaling 6 alpha2-GGL [Homo sapiens]
Length = 435
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|3831578|gb|AAC70011.1| regulator of G-protein signaling 6 [Mus musculus]
Length = 409
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 18 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 55
>gi|46202723|ref|ZP_00052712.2| COG3659: Carbohydrate-selective porin [Magnetospirillum
magnetotacticum MS-1]
Length = 693
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 41/193 (21%)
Query: 51 YGIWSGNYVGLHIS-----------------RLYETHPLADTINRKTYNSLLPNGLG-IE 92
+G W+G Y G S R D R LG +
Sbjct: 28 FGTWAGGYTGWQGSAGDAFGDFGFGSGMIGRRSVPEFRTGDATGRNDAGRNATTALGGLF 87
Query: 93 LGHNIQLEDFVFGINCHTTAAKD----------------DSTFYRLKEKYFIYGDVVLKA 136
G+ Q+ FV+G+ A D F ++ K ++G +
Sbjct: 88 GGYAWQIGPFVYGVEADVDATNLKRPVSSTTPGFGFEGLDPAFPVIRAKADVFGTARARV 147
Query: 137 GYSVDSLLIYGMGGFGGAYV--IDSSLEKVESDNSKNAKGR-FDGHGSSVVLGIGLDYMV 193
GY+ + L+Y G GA V + + + + +GR F G LG G++Y +
Sbjct: 148 GYAFERYLVYASFGLAGAQVRFLTNFPDPATTSAPALRRGRAFLG----FSLGAGIEYAI 203
Query: 194 NYDISLSASYRYI 206
++L YRY+
Sbjct: 204 TEHLALGLEYRYL 216
>gi|19908840|gb|AAM03013.1| regulator of G protein signaling 6 beta-GGL [Homo sapiens]
Length = 428
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|119601468|gb|EAW81062.1| regulator of G-protein signalling 6, isoform CRA_a [Homo sapiens]
Length = 428
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|19908839|gb|AAM03012.1| regulator of G protein signaling 6 gamma2-GGL [Homo sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|90422268|ref|YP_530638.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
gi|90104282|gb|ABD86319.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
Length = 447
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 13/161 (8%)
Query: 90 GIELGHNIQLEDFVFGINC----HTTAAKDDSTFYRLKE---KYFIYGDVVLKAGYSVDS 142
G ++G+N Q ++V+G+ T D + + L K +G V + GYS+ S
Sbjct: 284 GGQVGYNWQASNWVYGLEADFQGSTQRDNDTAVLFGLAAYDAKLPWFGTVRGRLGYSLGS 343
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDN-SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L YG GG+ V + S+ SK A G G G + L +V + +
Sbjct: 344 TLFYGTGGYAYGNVKTTITAGTGSETISKTASGWTAGAG--IETPFTLLGLVGPNWTSKT 401
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y+ + S S+ + K HI GIN HF
Sbjct: 402 EYLYV--DLGST-TSDFAGGLAPNTIKVTEHIFRTGINYHF 439
>gi|325053682|ref|NP_001191349.1| regulator of G-protein signaling 6 isoform 6 [Homo sapiens]
gi|332842762|ref|XP_003314498.1| PREDICTED: regulator of G-protein signaling 6 [Pan troglodytes]
gi|119601472|gb|EAW81066.1| regulator of G-protein signalling 6, isoform CRA_e [Homo sapiens]
Length = 435
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|332229055|ref|XP_003263703.1| PREDICTED: regulator of G-protein signaling 6 isoform 8 [Nomascus
leucogenys]
Length = 448
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|146343090|ref|YP_001208138.1| hypothetical protein BRADO6285 [Bradyrhizobium sp. ORS278]
gi|146195896|emb|CAL79923.1| Putative outer membrane protein [Bradyrhizobium sp. ORS278]
Length = 267
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 98/266 (36%), Gaps = 55/266 (20%)
Query: 15 LSIVVPNHSL-AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+++++P S+ A DL P K F E WSG ++GLH+ + ++ +
Sbjct: 12 VAVLIPGGSVFAADL--PVKAPTFAERF-----------AWSGCHLGLHLGGAWASNSIT 58
Query: 74 DTINRKTYNSLL----------------PNGL-GIELGHNIQLEDFVF----------GI 106
D + N L G+ G ++G + Q V +
Sbjct: 59 DPVLLVQDNGNLGGPGFTTVGTTVKTGQSGGIAGGQIGCDYQFPSSVVVGAEFSASGAAL 118
Query: 107 NCHTTAAKDDST--FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
N T A DS + K K D+ +AGY+VD L Y GG A S+
Sbjct: 119 NGSRTFALPDSPPDIAQAKIKTDFITDLTARAGYAVDHWLFYAKGGVAWAST-KYSVTGG 177
Query: 165 ESDNSKNAKGRFDGHGSSV----VLGIGLDYMVNYDISLSASYRYIPHHIHSVN-----N 215
++ N FD G SV G G+++ D S Y Y +VN N
Sbjct: 178 FTNAGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQDWSARFEYDYYDFGTRAVNMVDVLN 237
Query: 216 SNAKSDVERVDRKGNAHIASLGINMH 241
NA + + K + +G+N H
Sbjct: 238 GNAAAG--PLSFKTSVQTVKVGVNFH 261
>gi|19908835|gb|AAM03008.1| regulator of G protein signaling 6 gamma1-GGL [Homo sapiens]
Length = 448
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|325053684|ref|NP_001191350.1| regulator of G-protein signaling 6 isoform 7 [Homo sapiens]
gi|332842772|ref|XP_003314502.1| PREDICTED: regulator of G-protein signaling 6 [Pan troglodytes]
gi|119601471|gb|EAW81065.1| regulator of G-protein signalling 6, isoform CRA_d [Homo sapiens]
Length = 448
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
>gi|115526777|ref|YP_783688.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115520724|gb|ABJ08708.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris BisA53]
Length = 228
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 28/197 (14%)
Query: 54 WSGNYVGLHISRLY-ETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTT 111
W+G Y+G HI + +A + R + L G++ G++ Q ++VFGI +
Sbjct: 42 WTGFYIGGHIGGAFVGDDSIATGVTRNNDGTFLG---GVQGGYDYQFAPNWVFGIEAQYS 98
Query: 112 AAKDDS-----TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA-YVIDSSLEKVE 165
+ Y +K G V + GY+ L+Y GG+ A Y +L V
Sbjct: 99 WLDSGTDPVLVGAYSFSDKQKGLGSVTGRIGYTWGPALLYAKGGYAFADYDTTVTLGGVG 158
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ S + G +G GL+Y+ S Y+Y + +V D
Sbjct: 159 AAVSSKSDG--------YTVGGGLEYLFAPSWSAKVEYQY--YDFGNV-------DFGTF 201
Query: 226 DRKGNAHIASLGINMHF 242
K + H+ G+N F
Sbjct: 202 SVKNDEHVVKAGLNYRF 218
>gi|325053680|ref|NP_001191348.1| regulator of G-protein signaling 6 isoform 5 [Homo sapiens]
gi|332842760|ref|XP_003314497.1| PREDICTED: regulator of G-protein signaling 6 [Pan troglodytes]
gi|119601475|gb|EAW81069.1| regulator of G-protein signalling 6, isoform CRA_h [Homo sapiens]
Length = 453
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
I LG I + ++F I+ H KDD TFYR + YF
Sbjct: 81 AIHLGSLIAAQGYIFPISDHVLTMKDDGTFYRFQAPYF 118
Searching..................................................done
Results from round 2
>gi|254781078|ref|YP_003065491.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040755|gb|ACT57551.1| hypothetical protein CLIBASIA_04900 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 242
Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats.
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG
Sbjct: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY
Sbjct: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG
Sbjct: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM
Sbjct: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
Query: 241 HF 242
HF
Sbjct: 241 HF 242
>gi|315122463|ref|YP_004062952.1| hypothetical protein CKC_03575 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495865|gb|ADR52464.1| hypothetical protein CKC_03575 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 294
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 86/217 (39%), Positives = 134/217 (61%), Gaps = 11/217 (5%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN 96
F+ NN+EY DDEYGIW G +VG++ S + K +S +GI+ G++
Sbjct: 77 FDNRCNNIEYLDDEYGIWEGIHVGINFSSQHYNQAFYYEPYNKAKSSFNKYKVGIDTGYD 136
Query: 97 IQLEDFVFGINCHTTAAK----------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ EDFV+G+ + +K D + F+R+K Y IYGD + +AGYSVDS+L+Y
Sbjct: 137 LHTEDFVYGLRFSSNFSKGLEANAKLSSDQALFHRMKAGYSIYGDALFRAGYSVDSVLVY 196
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G+GG GG Y+ +S+L+K++ + S N +F G+G +VLG+G+DYM+ +IS++ SYRY
Sbjct: 197 GLGGLGGTYIGNSTLQKIDKEGSGNHATKFSGYGVGIVLGVGVDYMIWDNISVTTSYRYA 256
Query: 207 PHHIHSVN-NSNAKSDVERVDRKGNAHIASLGINMHF 242
PH I N + +A ++ ++ NAHI SLG++MH
Sbjct: 257 PHSIRFNNISKDASETIKEINGTSNAHIISLGLSMHL 293
>gi|170750202|ref|YP_001756462.1| carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
gi|170656724|gb|ACB25779.1| Carbohydrate-selective porin OprB [Methylobacterium radiotolerans
JCM 2831]
Length = 708
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 86/235 (36%), Gaps = 50/235 (21%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI------- 63
V+ ++ P + A DL+ PR Q Y WSG YVGL
Sbjct: 14 LVLTAPLLAPVAARAADLFAPRPT-----------AQAPAYTDWSGGYVGLEGSAGGSYG 62
Query: 64 ----------SRLYETHPLADTINR--KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
R D+ R + N+ G G+ G N Q +V+GI
Sbjct: 63 AYSFGPTTIGGRPVPPFKSGDSTGRSDQGKNATTATG-GLFGGWNWQAGPWVYGIEASLD 121
Query: 112 AAK--------------DDST--FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
AA D+T F ++ K +YG + + GYS D LIYG G GA
Sbjct: 122 AANLKRPVPSTIAGFGYADTTPAFNIVRAKTDLYGALRARLGYSFDRYLIYGTFGLAGAN 181
Query: 156 V-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
I ++ +++ A+ D LG G+ Y + ++L YRYI
Sbjct: 182 ARILANYPDLDAGGQTAARRDLDY--VGFTLGAGVQYAITDSLALGIDYRYIDLG 234
>gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 205
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 87/231 (37%), Gaps = 33/231 (14%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+ IVV LA L P AD + Y D WSG YVG+H + P
Sbjct: 5 VKIVVTAAGLAFCLLGPAM-----AADLSPTYNDPPAFQWSGAYVGVHGGTAFTGMP-NP 58
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH---TTAAKDDSTFYRLKEKYFIYGD 131
R ++ G++ G+N Q+ V G A+ D ++KEK G
Sbjct: 59 FAGRNGFSG------GVQAGYNQQMGPTVLGAEIEGSYLGGAEHDVQGGKIKEK--WRGA 110
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
KAG S D L++G GG V + +K ++ +S DG +LG G++
Sbjct: 111 AKAKAGLSFDQTLLFGTGG-----VALTKFDKGDNVSSA------DGWKVGYLLGAGIEQ 159
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+S Y Y+ ++ + + +H GIN F
Sbjct: 160 GFAGGLSAKVEYDYV----RTLGVETTSA-LGTSKTTIGSHELKAGINYRF 205
>gi|90422419|ref|YP_530789.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
gi|90104433|gb|ABD86470.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisB18]
Length = 207
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 25/197 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
YQ W+G Y+G ++ + D N T S + G++ G+N Q FV+G
Sbjct: 36 YQPLNAHSWAGPYLGGNLGYAW-----GDVHNSATEPSGVAG--GVQAGYNWQSGQFVYG 88
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ D TF K +G V +AGYS D+LL+Y GG A+ +
Sbjct: 89 LEGDIAITGADDTFASWKFSNPWFGTVRGRAGYSFDNLLVYATGGL--AFGELKGERFGQ 146
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
S++S NA +G G ++ +N + S Y Y+ + SN + V
Sbjct: 147 SNSSTNA---------GWTIGAGAEFGLNQNWSAKVEYLYVD-----LGGSNFS--ITGV 190
Query: 226 DRKGNAHIASLGINMHF 242
I +G+N HF
Sbjct: 191 QNSYQFGILRVGVNYHF 207
>gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 205
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 83/231 (35%), Gaps = 33/231 (14%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
I++ +LA+ L P AD + Y D WSG YVG+H + P
Sbjct: 5 AKIILTASALAMCLLGPAM-----AADLSPAYNDPPAFQWSGAYVGVHGGTAFTGMP-NP 58
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH---TTAAKDDSTFYRLKEKYFIYGD 131
R + G + G+N Q+ V G A+ D ++KEK G
Sbjct: 59 FAGRNGLSG------GFQAGYNQQMGPAVLGAEIEGSYLGGAEHDVRGGKIKEK--WRGA 110
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
KAG S D L++G GG V + +K + N DG ++G G++
Sbjct: 111 AKAKAGLSFDQTLLFGTGG-----VAMTKFDKGDKVNG------IDGWKLGYLVGGGIEQ 159
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+S Y Y+ S + + +H GIN F
Sbjct: 160 GFAGGLSAKVEYDYVRTP-----GVETTSALGKSKATIGSHELKAGINYRF 205
>gi|312114546|ref|YP_004012142.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219675|gb|ADP71043.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 250
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 21/247 (8%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE--T 69
++ L I+ ++A+ + DL+ W+G Y G++ + +
Sbjct: 1 MIRLGIIGTVSAIALTVSANA-ADLYRAPAGGGLKDAPYVATWTGFYAGVNGGYAWSQSS 59
Query: 70 HPLADTINRKTYNSLLP--NGLGIELGHNIQ---LEDFVFGINCHTTAAKD-----DSTF 119
LA + L P G ++G+N+Q + V GI + DS
Sbjct: 60 DQLAYVDPNYPFYGLSPEGGFGGGQIGYNLQGFVHPNLVLGIEADIQGSDISDSGVDSAT 119
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
Y+ K +G V + GY++DS L+Y GGF + + ++ + + +FDG+
Sbjct: 120 YKYSSKVDWFGTVRGRLGYAIDSALVYATGGFAYGGIKN----DYDARHLGAGEFKFDGN 175
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAK--SDVERVDRKGNA-HIAS 235
+ V+G G++Y + SL A Y+YI + V+ S + +D+E + +A H
Sbjct: 176 ATGYVVGGGVEYKLAPAWSLKAEYQYINLGKNNPVDTSTGQHYTDLEGTKLEDDAFHTVR 235
Query: 236 LGINMHF 242
+G+N HF
Sbjct: 236 VGLNYHF 242
>gi|312113068|ref|YP_004010664.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
gi|311218197|gb|ADP69565.1| hypothetical protein Rvan_0276 [Rhodomicrobium vannielii ATCC
17100]
Length = 260
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLAD---TINRKTY----NSLLPNGL--GIELGHNIQLE 100
+W G Y+G +I + T A +N T S+ +G G++LG+NI +
Sbjct: 49 PIPLWQGFYIGGNIGGAWSTIETASNVVFVNGATTVLSDRSVEGSGFLGGLQLGYNIPIG 108
Query: 101 DFVFGINCHTTAAKDDST-----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+F++GI +D++ + YGDV ++ G+ + LIY G
Sbjct: 109 NFLWGIEGDLGGLGNDASKSFAVGGVLPSVLTVSSDGGWYGDVTVRGGFLYGNALIYLKG 168
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
GF G Y ++++ V + S A + G + LG GL+Y V+ S+ A Y Y
Sbjct: 169 GF-GFYTGETNVTLVTDNIS--ALRQSSGTFTGWTLGGGLEYQVSPRWSIKAEYLYFDFG 225
Query: 210 IHSVNNSNAK 219
++N + +
Sbjct: 226 DSTLNFDDRQ 235
>gi|83308662|emb|CAJ01570.1| outer membrane protein [uncultured bacterium]
Length = 238
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 20/167 (11%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCH 109
W+G Y+G I + T L R + PNG+ G +G+N+Q FV G+
Sbjct: 38 FTWAGLYLGGQIGYGWGTDTLT-VFPRGFGTNFTPNGVVGGAHIGYNLQFNQFVAGLEGD 96
Query: 110 TTAAKDDSTFYR----LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
DS+F + + G + + G + D L+Y GG E
Sbjct: 97 VEGTSIDSSFSPGGVLYSTRIPVQGSIRGRVGVAFDRALLYATGG----------AEFAG 146
Query: 166 SDNSKNAKGRFDGHGS---SVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ S+N FD + + +G G++Y V + S+ A YRY
Sbjct: 147 FNTSENGFPGFDQNSTTRTGWTVGGGIEYAVTGNWSIRAEYRYADFG 193
>gi|312113967|ref|YP_004011563.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311219096|gb|ADP70464.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 294
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 45/211 (21%)
Query: 48 DDEYGIWSGNYVGLHISRLY----------ETHPLADTINRKTYNSLL-PNGL--GIELG 94
+W+G YVG H+ + P + T +R YN L G+ G+ +G
Sbjct: 37 APPPPLWTGFYVGAHLGGGWTDFDLGRNSYYYWPTSTTYDRYDYNGGLSGTGIFGGLTIG 96
Query: 95 HNIQLE---DFVFGINCHTTAAKDD------------------STFYRLKEKYFIYGDVV 133
+N Q ++V+GI +DD ST R K YGD+
Sbjct: 97 YNWQFGQCCNYVYGIELDIGGWRDDASKTIYIDDDRRGLDPDASTRIRFTNKGGFYGDIT 156
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS--------SVVL 185
+ GY+ + LIY GGF A++ +S V +N +D + +
Sbjct: 157 GRIGYAAGNTLIYAKGGF--AWLNNSFRVGVLRENGATGY-NYDWSSTTDNGNTLAGWTV 213
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
G GL+Y NY+ S+ A Y Y +V +
Sbjct: 214 GGGLEYKWNYNWSVKAEYLYFNFGEPNVGGN 244
>gi|92118614|ref|YP_578343.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
gi|91801508|gb|ABE63883.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
hamburgensis X14]
Length = 206
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 25/215 (11%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
L + F+ Q W+G Y+G ++ + + + T +
Sbjct: 17 LIGTAQAADFSYRSPYTVNQPLNAYSWAGPYLGGNLGYAWGSVQNSATKPNGVFG----- 71
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G++ G+N Q VFG+ A D F R K +G V + GY+ +++LIYG
Sbjct: 72 --GVQAGYNWQSGPLVFGLEGDIQANAADDIFARWKFSNPWFGTVRGRLGYAFNNVLIYG 129
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG A+ + S++ NA +G+G ++ + + + Y Y+
Sbjct: 130 TGGL--AFGALRAETFGLSESHTNA---------GWTVGVGAEFGIYQNWTAKVEYLYVD 178
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++SN + + G+N HF
Sbjct: 179 -----LSSSNF--TITDAPNSYQFGLVRAGVNYHF 206
>gi|27382580|ref|NP_774109.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355752|dbj|BAC52734.1| bll7469 [Bradyrhizobium japonicum USDA 110]
Length = 208
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G +I + + + GI+ G+N Q +VFG+ AA
Sbjct: 45 WAGPYLGGNIGYEWGSVDNNPSKPSGFVG-------GIQAGYNFQNGPWVFGVEGDIQAA 97
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D TF K +G + + GY+ ++L YG G + + ES S
Sbjct: 98 GADDTFAPWKFSNPWFGTLRGRVGYAFSNVLFYGTAGLAFGELRAQTFGWTESHTSA--- 154
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G G + + + S Y YI S ++ + V A +
Sbjct: 155 --------GWTIGAGAEVGLAPNWSAKLEYLYIDL-------STSQFAITGVSNGYTASV 199
Query: 234 ASLGINMHF 242
G+N HF
Sbjct: 200 VRAGVNYHF 208
>gi|75676711|ref|YP_319132.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
gi|74421581|gb|ABA05780.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
winogradskyi Nb-255]
Length = 206
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 25/215 (11%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
L F+ Q + W+G Y+G ++ + + + T +
Sbjct: 17 LIGAAHAADFSYRAPYTVNQPLDAFSWAGPYLGGNLGYAWGSVQNSLTRPDGVFG----- 71
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G++ G N Q VFG+ A + TF K +G V + GY+ +++L+YG
Sbjct: 72 --GVQAGFNWQSGPVVFGLEGDIQANAANDTFAAWKFSNPWFGTVRGRIGYAFNNVLVYG 129
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG + + ES S +G+G + + + + Y Y+
Sbjct: 130 TGGLAFGKLRAETFGLSESHTSA-----------GWTVGVGAEVGIYQNWTAKVEYLYVD 178
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S++ + + + GIN HF
Sbjct: 179 L-------SSSSFTITGAPHSYQSGMVRAGINYHF 206
>gi|85716040|ref|ZP_01047017.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
gi|85697238|gb|EAQ35119.1| putative outer-membrane immunogenic protein precursor [Nitrobacter
sp. Nb-311A]
Length = 206
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 81/215 (37%), Gaps = 25/215 (11%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
L + F+ Q W+G Y+G ++ + + + T +
Sbjct: 17 LIGTAQAADFSYRAPYTVNQPLNAFSWAGPYLGGNLGYAWGSVQNSLTKPDGVFG----- 71
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G++ G+N Q VFG+ A + TF K +G V + GY+ ++L+YG
Sbjct: 72 --GVQAGYNWQSGSMVFGLEGDIQANAANDTFAAWKFSNPWFGTVRGRLGYAFSNVLVYG 129
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG A+ + S++ NA +G+G + + + + Y Y+
Sbjct: 130 TGGL--AFGKLRAETFALSESHTNA---------GWTVGVGAEVGIYQNWTAKVEYLYVD 178
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++SN + + + G+N HF
Sbjct: 179 -----LSSSNF--TITGAPHSYQSGLVRAGVNYHF 206
>gi|39934247|ref|NP_946523.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39648095|emb|CAE26615.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 226
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 25/192 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y+G ++ + T G++ G+N Q + VFG+
Sbjct: 60 AFSWAGPYLGGNLGYSWGNVTNNITKPSGFSG-------GVQGGYNWQSGNIVFGLEGDI 112
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ D TF + K +G + GY+++ +LIY GG + +
Sbjct: 113 QFSTADDTFAQYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLK-----------GQ 161
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
N + +G G ++ +S Y Y+ S++ SN + + N
Sbjct: 162 NVFASESHSSAGWTVGAGAEFAFAPKLSAKVEYLYM-----SLSTSNF--FITGMPNGYN 214
Query: 231 AHIASLGINMHF 242
A + GIN HF
Sbjct: 215 AGLVRAGINYHF 226
>gi|115522948|ref|YP_779859.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115516895|gb|ABJ04879.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 207
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G ++ + D N S L GI+ G+N Q V+G+
Sbjct: 44 WAGPYLGGNLGYAW-----GDIHNNSAKPSGLSG--GIQGGYNWQSGQMVYGLEGDLQIT 96
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ TF + K +G V + GY+ ++++ YG GG AY ++ S + NA
Sbjct: 97 GANDTFAQYKFSNPWFGTVRGRIGYAFNNVMFYGTGGL--AYGELTAEMGGLSQSHTNA- 153
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+G G ++ + + + Y Y+ + SN + I
Sbjct: 154 --------GFTVGAGAEFGLMPNWTAKIEYLYVD-----LGESNFS--LTTRSHSYEFGI 198
Query: 234 ASLGINMHF 242
G+N HF
Sbjct: 199 VRFGVNYHF 207
>gi|148253259|ref|YP_001237844.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405432|gb|ABQ33938.1| putative outer membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 206
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 68/189 (35%), Gaps = 25/189 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G + + + T G+ G+N Q +VFG
Sbjct: 43 WAGPYLGGTLGYEWGSVGNNPTKPSGLVG-------GLTAGYNWQNGPWVFGAEGDINLT 95
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ TF K +G V +AGY+ +++L YG GG + + ES S
Sbjct: 96 GANDTFAPWKFSNPWFGTVRGRAGYAFNNILFYGTGGLAFGGLRGETFGLSESHTS---- 151
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
LG G ++ + + + Y YI +++SN + +
Sbjct: 152 -------LGWTLGAGAEFGLAQNWTAKIEYLYID-----LDSSNF--VITGAKNDYRFGV 197
Query: 234 ASLGINMHF 242
GIN HF
Sbjct: 198 VRAGINFHF 206
>gi|192289773|ref|YP_001990378.1| outer-membrane immunogenic protein precursor [Rhodopseudomonas
palustris TIE-1]
gi|192283522|gb|ACE99902.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris TIE-1]
Length = 207
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 25/192 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y+G ++ + T G++ G+N Q + VFG+
Sbjct: 41 AFSWAGPYLGGNLGYSWGNVTNNITKPSGFSG-------GVQGGYNWQSGNIVFGLEGDI 93
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ D TF + K +G + GY+++ +LIY GG + +
Sbjct: 94 QFSTADDTFAQYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLK-----------GQ 142
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
N + +G G ++ +S Y Y+ S++ SN + + N
Sbjct: 143 NVFASESHSSAGWTVGAGAEFAFAPKLSAKVEYLYM-----SLSTSNF--FITGMPNGYN 195
Query: 231 AHIASLGINMHF 242
A + GIN HF
Sbjct: 196 AGLVRAGINYHF 207
>gi|316932716|ref|YP_004107698.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600430|gb|ADU42965.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris DX-1]
Length = 207
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 25/192 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y+G ++ + T G++ G+N Q + VFG+
Sbjct: 41 AFSWAGPYLGGNLGYGWGNVTNNITKPSGFSG-------GLQGGYNWQSGNIVFGLEGDI 93
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ D TF K +G + GY+++ +LIY GG + +L ES +S
Sbjct: 94 QFSTADDTFAPYKFSNPWFGTGRGRIGYAMNDVLIYATGGLAFGQLKGQNLAVSESHSSA 153
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G G ++ +S Y Y+ S + + N
Sbjct: 154 -----------GWTVGAGAEFAFAPKLSAKVEYLYMSL-------STNNFFITGMPNGYN 195
Query: 231 AHIASLGINMHF 242
A + GIN HF
Sbjct: 196 AGMVRAGINYHF 207
>gi|299134246|ref|ZP_07027439.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
gi|298590993|gb|EFI51195.1| outer membrane protein Omp31 [Afipia sp. 1NLS2]
Length = 209
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 27/191 (14%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTA 112
W+G Y+G ++ + + S GI+ G+N Q +V G+ A
Sbjct: 44 WAGPYLGANLGYNFGDV-------SNSGTSPSGFSGGIQGGYNWQFGTPWVLGLEADLQA 96
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D TF K YG + + GY+++ + +IYG GG + + E+ +
Sbjct: 97 TGADDTFAAWKFSNPWYGTIRGRVGYAINPNFMIYGTGGLAFGQLKGTMPGLSETHTTA- 155
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G G ++ + + SL A Y Y+ +++SN + +
Sbjct: 156 ----------GWTVGGGAEFALTNNWSLKAEYMYVD-----LDSSNF--LITGLPNGYQF 198
Query: 232 HIASLGINMHF 242
+G+N HF
Sbjct: 199 STVRVGVNYHF 209
>gi|150395644|ref|YP_001326111.1| porin [Sinorhizobium medicae WSM419]
gi|150027159|gb|ABR59276.1| porin [Sinorhizobium medicae WSM419]
Length = 225
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 74/229 (32%), Gaps = 17/229 (7%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKT 80
+ + P ++ W+G Y+G ++ +T
Sbjct: 7 SAAFLAGALSPVVAADLAPVESPPAISAPAAFDWNGFYLGGNVGGGRADVDWTYQPFGET 66
Query: 81 -YNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF------YRLKEKYFIYGDVV 133
++ G++ G+N Q++ FV G + D Y V
Sbjct: 67 AHHDGKGFLGGVQAGYNWQIDGFVIGAEADFLGSSIDGDTPCPNPAYSCTSDTKWLSTVR 126
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+AGYS D+LL+Y GG G + + + S + + V G G++Y
Sbjct: 127 ARAGYSFDNLLVYATGGLGIGRFEIKTDDGAGTSGST------IRNDTGWVAGAGVEYGF 180
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + S+ A Y + + VD +G+N F
Sbjct: 181 SPNWSIKAEYMHHDFGERTYTVDGGNP----VDADFRFDTGKIGVNYRF 225
>gi|91975762|ref|YP_568421.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91682218|gb|ABE38520.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 207
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 25/192 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y+G ++ + + T G++ G+N Q + VFG+
Sbjct: 41 AFSWAGPYLGGNLGYSFGNVTNSITKPSGFNG-------GVQGGYNWQSGNIVFGLEGDI 93
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ D TF K +G + GY+++ LLIY GGF A+ + +++
Sbjct: 94 QFSTADDTFAPYKFSNPWFGTARGRVGYAMNDLLIYATGGF--AFGQLKGERLLSTESHS 151
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+A +G G ++ +S Y Y S++ +N + N
Sbjct: 152 SA---------GWTVGAGAEFAFAPKLSAKVEYLY-----GSLSTNNF--FITGAPNGYN 195
Query: 231 AHIASLGINMHF 242
+ GIN HF
Sbjct: 196 FGVVRAGINYHF 207
>gi|209886326|ref|YP_002290183.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874522|gb|ACI94318.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 208
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 71/193 (36%), Gaps = 29/193 (15%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHT 110
W+G Y+G ++ + + + + G++ G+N Q +VFG+
Sbjct: 43 FSWAGPYLGANLGYNWGSV-------SNSGTNPTGFAGGVQGGYNWQFGSPWVFGLEADI 95
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNS 169
A D TF K YG V + GY+++ + ++YG GG +
Sbjct: 96 QATGADDTFAAWKFSNPWYGTVRGRVGYALNPNFMLYGTGGLAFGELK-----------G 144
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +G G ++ +N SL A Y Y+ S++ +
Sbjct: 145 STPFYSASHVSAGWTVGAGAEFALNNAWSLKAEYLYVDLD---------SSNINGLPNGY 195
Query: 230 NAHIASLGINMHF 242
N +G+N HF
Sbjct: 196 NFSTVRVGVNYHF 208
>gi|110632458|ref|YP_672666.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110283442|gb|ABG61501.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 237
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 78/222 (35%), Gaps = 29/222 (13%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L + V+ + + A D+ + W+G YVG++
Sbjct: 3 LLVATAAACVISSSAFAADILYDAPPAPPAPPPPPAPFN------WTGPYVGVYGGIAAG 56
Query: 69 THPLA-------DTINRKTYNSLLPNGLG-IELGHNIQLEDFVFGINCHTTAAKDDSTFY 120
T S +G I++G++ Q+ ++V G A +
Sbjct: 57 DIKHNLNVLGNVPFTGLLTERSRAGGAIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNS 116
Query: 121 RL---------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
K G V +AGY+ D L+YG GGF +S + + +D K
Sbjct: 117 YYVLGTRIAKDSSKLSYLGTVRARAGYAWDRTLVYGHGGFAYGKTKQTS-DFIGTDTLKQ 175
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
++ R + +G G++Y V ISL + Y Y+ +
Sbjct: 176 SQTR-----TGWTIGAGVEYAVTDRISLGSEYSYVDFGKKDI 212
>gi|146343868|ref|YP_001208916.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146196674|emb|CAL80701.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 278
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 95/269 (35%), Gaps = 45/269 (16%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDE---YGIWSGNYVGLHISRLYE----- 68
+V+ + AV L + + F + + W+G Y G +I +
Sbjct: 4 VVMKTLASAVSLLIASSLSTFAADLSARYTKAPPPAAIYNWTGGYFGGNIGYGWGRSNLG 63
Query: 69 -------THPLADTINRKTY-----NSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAK 114
+ + + N L P+G+ G++ G+N Q VFGI +
Sbjct: 64 TTLDQTSSWATEPVPFQNQFVAISNNRLNPSGVVGGLQAGYNWQAGPSVFGIEADINGSG 123
Query: 115 DD------------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ + + + + + +AGY++D+ L+Y GG V S
Sbjct: 124 VNKRVVYTGVNVPTTRTFNESIRNDWFMTLRGRAGYAIDTTLLYVTGGLAVGNVKGSW-- 181
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IPHHIHSVNNSN 217
+ S N N G D + +G G+++ + ++ A Y Y I + V S
Sbjct: 182 DLTSGNGYNKTGSADQTRAGWTIGAGVEHAFAPNWTVKAEYLYTDLGSINYTSGYVPGST 241
Query: 218 AKSD----VERVDRKGNAHIASLGINMHF 242
VER+ + H +G+N
Sbjct: 242 FAPPGFNYVERLSQDFTFHTVRIGVNYKL 270
>gi|13470965|ref|NP_102534.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021708|dbj|BAB48320.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 226
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 76/217 (35%), Gaps = 24/217 (11%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLY------ETHPLADTINRKTYNSLLPNGLGIEL 93
A + + + WSG YVG I + P TI G+++
Sbjct: 20 AADAISAEPATAHDWSGVYVGGQIGYGFGKTDATYNLPNTPTIRGSQDYDTDGFLGGVQI 79
Query: 94 GHNIQLEDFVFGINCHTTAAKD--------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
G+N Q+ V G+ + A R K +G + +AGY+ D LI
Sbjct: 80 GYNYQINSAVLGVEADVSGADIKGHSDEITSGLGDRYDTKVDWFGTLRARAGYAFDRTLI 139
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
YG GG V + ++ S+ +G GL+ + S Y+Y
Sbjct: 140 YGTGGLAFGSVENRYVDGPFDTFSEKNT------KVGWTIGAGLEQAITDHWSAKFEYQY 193
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +++ + + D NA +G+N F
Sbjct: 194 VDLRDQTIDYAPNSNTT--FDNTFNA--VKIGMNYKF 226
>gi|312112850|ref|YP_004010446.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
gi|311217979|gb|ADP69347.1| outer membrane protein [Rhodomicrobium vannielii ATCC 17100]
Length = 233
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 27/241 (11%)
Query: 6 YGALFF-VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
Y +L+ ++ ++ VP + A D+Y + V+ W+G YVG++
Sbjct: 6 YRSLYLAIIGAAVTVPLGANAADMYRAPAPTTYAPPPPIVQPNT-----WAGFYVGINGG 60
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD--DSTFYRL 122
+ + T + G ++G+N Q +FV+G+ A + S Y
Sbjct: 61 YGWG------ASDDSTRGDVNGGFGGGQIGYNFQSGNFVYGLETDLQAGRITGKSDDYAS 114
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGRFDGHGS 181
KE +G + + GY+ + L+YG GGF V + V N D +
Sbjct: 115 KETTDWFGTLRGRLGYAFGNTLLYGTGGFAYGGVNQKMNYADVLFSN--------DDTRT 166
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
G G++Y V+ + SL Y+Y+ ++ A S +E + H A +G+N
Sbjct: 167 GWTAGAGIEYKVSGNWSLKGEYQYVDFGKEDLSG--AASTIEGPETS--FHTAKIGLNYR 222
Query: 242 F 242
Sbjct: 223 L 223
>gi|86748303|ref|YP_484799.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86571331|gb|ABD05888.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 207
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 68/192 (35%), Gaps = 25/192 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
W+G Y+G ++ + T G++ G+N Q + VFG+
Sbjct: 41 AFSWAGPYLGGNLGYAFGNVTNNITKPSGFSG-------GVQGGYNWQSGNIVFGLEGDI 93
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + TF K +G + GY+++ +L+Y GG + L ES S
Sbjct: 94 QFSTANDTFASYKFSNPWFGTARGRVGYAMNDILLYATGGLAFGQLKGEYLLSSESHTSA 153
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+G G ++ +S Y Y S++ +N + N
Sbjct: 154 -----------GWTVGAGAEFAFAPKLSAKVEYLY-----GSLSTNNF--FITGAPNGYN 195
Query: 231 AHIASLGINMHF 242
+ GIN HF
Sbjct: 196 FGLIRAGINYHF 207
>gi|217977074|ref|YP_002361221.1| porin [Methylocella silvestris BL2]
gi|217502450|gb|ACK49859.1| porin [Methylocella silvestris BL2]
Length = 254
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 24/208 (11%)
Query: 52 GIWSGNYVGLHISRLYETHPLA---DTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGI 106
W+G Y+G I + T I S +G+ G +G+N+QL FV G+
Sbjct: 41 FTWTGVYIGGQIGYAWGTQNANFGDSFIGTLGSVSYDTSGVLGGAHVGYNLQLSQFVVGL 100
Query: 107 NCHTTAAKDDSTFY---------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ + + L + I G + + GY+ D +L+Y GG A V
Sbjct: 101 EGSVDGSSMSKSAFLTDEFGNSLTLSAQSNIQGSIRGRVGYAWDRVLLYATGGVAFAGVK 160
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ D++ + + +G GL+Y V + S+ A YRY + SN
Sbjct: 161 ANFYGPFSYDSASSTR-------VGWTVGGGLEYAVTNNWSVRAEYRYSDFGHSTFYPSN 213
Query: 218 AKSDVER---VDRKGNAHIASLGINMHF 242
S V ++R + +G + F
Sbjct: 214 YGSVVLTSPFINRHFKENQVQVGFSYKF 241
>gi|182677110|ref|YP_001831256.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
gi|182632993|gb|ACB93767.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
Length = 244
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 80/235 (34%), Gaps = 25/235 (10%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD-EYGIWSGNYVGLHISRLYETHPLADT 75
+ +LA DL A V Y W+G Y+G I + + T
Sbjct: 13 MASSVAALAADL-------PNRAAPPTVPYLPPSPAFSWTGVYLGGQIGYQFGRDSI--T 63
Query: 76 INRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDSTFY------RLKEKYF 127
PNG+ G +G N Q+ F+ G + + + +L +
Sbjct: 64 APGLFSVGHSPNGVVGGAHIGFNYQVSQFIVGFEGDVNGSSYSGSVFNPVFRTQLTSRIP 123
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+ G + + G + D +L+Y GG A + + +G
Sbjct: 124 VDGSLRGRIGAAWDRVLVYATGGAAFASIKH----GYIGSSLVPGSATLTNDRVGWTVGG 179
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G++Y + + S+ YRY + +++ V R+ + N + G + F
Sbjct: 180 GVEYAMTDNWSVRVDYRYTDYGN--ISDFPGTITVPRIHHETN-NRVQAGFSYKF 231
>gi|312115943|ref|YP_004013539.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221072|gb|ADP72440.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 291
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 77/233 (33%), Gaps = 44/233 (18%)
Query: 54 WSGNYVGLHISRLYE-------------THPLADTINRKTYNSLLPNGLGI-------EL 93
W+G YVG H+ + P Y++ NGLG +
Sbjct: 48 WTGFYVGGHLGAAWTNLETRRNTYWDRDPLPTGVAAAPYDYSTFGGNGLGTTGAFGGGQF 107
Query: 94 GHNIQLE-DFVFGINCHTTAAKDDS--------------------TFYRLKEKYFIYGDV 132
G+N Q +FV GI + D+ +K + IYGDV
Sbjct: 108 GYNWQTGGNFVLGIEVDVGGLQGDNERTFAAATYDGPALDAIDHIAVVNVKSQGGIYGDV 167
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK--GRFDGHGSSVVLGIGLD 190
+ GY+ + L+Y GGF + + + FD + G GL+
Sbjct: 168 TGRLGYAWGNTLLYLKGGFAWLATDLKVRAAITDIDGETDYYNRSFDNTLTGWTAGGGLE 227
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNS-NAKSDVERVDRKGNAHIASLGINMHF 242
Y N + ++ Y + + N + ++ + A LG N F
Sbjct: 228 YQFNPNWTMKVEYLHFDFSLDDNNWRWDEGNNWKIFKNDVTADTVKLGFNYRF 280
>gi|158425351|ref|YP_001526643.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332240|dbj|BAF89725.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 233
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 69/206 (33%), Gaps = 23/206 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGI 106
W+G Y+G + + + + S +G G ++G+N Q + V G+
Sbjct: 38 PVFSWTGFYIGANAGYGGDKYNYDFGVPTTATASTNSSGFFAGGQIGYNYQFANNVVLGL 97
Query: 107 NCHTTAAKDDSTFYRL--------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ D T + K +G V + GY+ D L Y GG
Sbjct: 98 ETDLQWSGIDGTLNTVTPGASTNIKSSLDYFGTVRARVGYAFDRFLPYITGGMAYGKTKT 157
Query: 159 SSLEKVESDNSKNAKGRFDGH--GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ S+ FD +G G++Y + + + Y+Y+ + NS
Sbjct: 158 EGSQF-----SRTGFTTFDDSDTKVGWTIGGGVEYAITNNWTFKTEYQYVD-----LGNS 207
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ V H G+N F
Sbjct: 208 DYGIGTNAVSVDNKFHTVRAGVNYKF 233
>gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2]
gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2]
Length = 255
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 77/210 (36%), Gaps = 26/210 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI----ELGHNIQLEDFVFGIN 107
W+G Y+G I + + + +G G+ +G+N+QL FV G+
Sbjct: 40 FTWTGVYIGGQIGYAWGNGSANFGDANGNFVNFGNSGNGVIGGAHVGYNLQLNQFVVGLE 99
Query: 108 CHTTAAKDDSTFY-------------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
T+ L I G + + GY+ D +L+Y GG A
Sbjct: 100 GSVDGTSLSKTYSGTAFVPGFGVAGINLHTSADIQGSIRGRVGYAWDRVLVYATGGVAFA 159
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
V S D+S K +G GL+Y V + S+ A YRY ++
Sbjct: 160 GVKASLSTPFSYDSSSTTK-------VGWTVGGGLEYAVTNNWSIRAEYRYSNFGNATLY 212
Query: 215 NSNAKSDVER--VDRKGNAHIASLGINMHF 242
++ V+RK N + +G + F
Sbjct: 213 PASLAGVDAGPFVNRKFNINQVQVGFSYKF 242
>gi|27379826|ref|NP_771355.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352979|dbj|BAC49980.1| blr4715 [Bradyrhizobium japonicum USDA 110]
Length = 283
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 79/251 (31%), Gaps = 47/251 (18%)
Query: 39 EADNNVEYQDD-----EYGIWSGNYVGLHISRLYETHPLA-------------------- 73
AD Y+ W+G YVG ++ + T
Sbjct: 24 AADLAPTYKMPVKAIAPVQTWNGFYVGGNVGYDWSTGSTGISVLSTDPALAAPLAALVAA 83
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKD-------------DSTF 119
+ S G++ G+N Q+ ++ G+ A D+T
Sbjct: 84 GSFPTALSPSAKGVIGGVQAGYNWQVAPQWLVGLEADFQGADVKGTTTQALAPVGFDATS 143
Query: 120 YRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDN-----SKNAK 173
+ + +G V + G V L+YG GGF S + + A
Sbjct: 144 TTVSKGIDWFGTVRGRVGVLVAPQWLLYGTGGFAYGRTKSSFSTTDVTGGCIVGATICAS 203
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN--NSNAKSDVERVDRKGNA 231
G G + G G + M + S A Y Y+ ++N +S + V
Sbjct: 204 GASSGTSTGWTAGAGTEVMFAPNWSFKAEYLYVDLGRRTLNVASSTVPAIVFTTSTPFRE 263
Query: 232 HIASLGINMHF 242
IA +G+N HF
Sbjct: 264 QIARVGVNYHF 274
>gi|13471424|ref|NP_102990.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022166|dbj|BAB48776.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 225
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 80/227 (35%), Gaps = 24/227 (10%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE--THPLADT---INRKTYN 82
+ AD VE W+G Y+G I + P T N +
Sbjct: 11 FFAALMAGTALAADATVELPVASSYNWTGGYIGAQIGGGWSKVDQPWGFTEASPNIFDQD 70
Query: 83 SLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK-----EKYFIYGDVVLK 135
+ +G+ G+ G+N Q FVFG A D K V +
Sbjct: 71 NADGSGVVGGLHAGYNWQSGSFVFGGEADINATGIDGDDGGSGGDINGFKARWVASVRAR 130
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
AG++ D +LIYG GG+ + + ++ + +G G +Y +
Sbjct: 131 AGFAFDRVLIYGTGGYAYLNGKADTRDVGRQESHSASFN-------GWTIGAGAEYALTD 183
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I++ YRY +V +N D+ H ++G++ F
Sbjct: 184 NITVRGEYRYADFGSKTVVFNNYVEDI-----SPALHTVTIGVSYKF 225
>gi|90422268|ref|YP_530638.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
gi|90104282|gb|ABD86319.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
Length = 447
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 73/216 (33%), Gaps = 26/216 (12%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN---RKTYNSLLPNGLGIELGHNIQL 99
N Y W+G Y+G + + + +I + L G ++G+N Q
Sbjct: 234 NGLYAPAPVANWTGFYLGGNFGSAFARNRTTASIGPFSEQFNLGLDGFAGGGQVGYNWQA 293
Query: 100 EDFVFGINCHTTAA---KDDSTF----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
++V+G+ + +D+ K +G V + GYS+ S L YG GG+
Sbjct: 294 SNWVYGLEADFQGSTQRDNDTAVLFGLAAYDAKLPWFGTVRGRLGYSLGSTLFYGTGGYA 353
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYI 206
V + S+ S G G++ + + Y Y+
Sbjct: 354 YGNVKTTITAGTGSETISKT-------ASGWTAGAGIETPFTLLGLVGPNWTSKTEYLYV 406
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ + K HI GIN HF
Sbjct: 407 DLGST---TSDFAGGLAPNTIKVTEHIFRTGINYHF 439
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 26/219 (11%)
Query: 38 NEADNNVEYQDD--EYGIWSGNYVGLH----ISRLYETHPLADTINRKTYNSLLPNGLGI 91
+ A Y+ W+G YVG++ + R A + TY G
Sbjct: 21 DLATKAPYYKAPIVAVYDWTGFYVGVNAGAGLGRDRAIQNFAPGLTSTTYLQPFGALGGG 80
Query: 92 ELGHNIQ----LEDFVFGINCHTTAAKDDSTFYR------LKEKYFIYGDVVLKAGYSVD 141
++G+N Q V G+ A T +K + + G +
Sbjct: 81 QIGYNYQTNSLFGPLVIGLEGDFQGADLSDTRTTLSGPVNYSQKLDWFATARGRIGIARG 140
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+L Y GGF V + ++ A + +G G++ + + +
Sbjct: 141 PVLNYFTGGFAAGDVRTTV-----TEGGFTAFDSGKRTLTGWTIGSGVEAALGGNWTGKI 195
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
Y ++ + N + + +I +G+N
Sbjct: 196 EYLHLD-----LGNKTDSFLGQTLQTSVRENIFRVGLNY 229
>gi|146342874|ref|YP_001207922.1| putative outer membrane protein [Bradyrhizobium sp. ORS278]
gi|146195680|emb|CAL79707.1| putative outer membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 214
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 74/192 (38%), Gaps = 30/192 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLE-DFVFGINCHT 110
W+G Y+G + + T ++ P+GL G+ G+N Q +V GI
Sbjct: 50 WAGPYLGGTLGYQWGTV---------GNSATKPSGLVGGVTAGYNWQNGSPWVLGIEGDI 100
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + TF K +G + + GY+ +++L YG GG + + ES
Sbjct: 101 NLSGANDTFAPWKFSNPWFGTLRGRVGYAFNNILFYGTGGLALGGLRAETFGLSESHT-- 158
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
LG+G ++ + + + Y Y+ ++++N +
Sbjct: 159 ---------AVGWTLGVGTEFGLAQNWTAKIEYLYVD-----LDSNNF--VITGAKNDYR 202
Query: 231 AHIASLGINMHF 242
+ + GIN HF
Sbjct: 203 SGMIRAGINFHF 214
>gi|217979266|ref|YP_002363413.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
gi|217504642|gb|ACK52051.1| OmpA domain protein transmembrane region-containing protein
[Methylocella silvestris BL2]
Length = 240
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 23/172 (13%)
Query: 54 WSGNYVGLHISRLYE--------THPLADTINRKTYNSLLPNGLG-IELGHNIQLEDFVF 104
W+G Y+G + + PL+ TI + ++ +G +G+N Q+++FV
Sbjct: 33 WAGFYLGGQVGYGWGSDSGNVTGGFPLSPTIQTASTSTQTQGAIGGAHIGNNWQIQNFVI 92
Query: 105 GINCHTTAAKDDSTFYRLKE-------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
G+ L + + G V + GY++D L+Y GG ++
Sbjct: 93 GLEGDVNGTTLSKMSTPLFNNLYFPYTQSPVQGTVRGRLGYALDRTLLYATGGLAYGWIH 152
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ ++ F + +G G+++ VN + S+ A YRY
Sbjct: 153 NDYNIFG-------SRSSFSTTKAGWTIGGGVEFAVNDNWSVRAEYRYTRFG 197
>gi|86749852|ref|YP_486348.1| hypothetical protein RPB_2735 [Rhodopseudomonas palustris HaA2]
gi|86572880|gb|ABD07437.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 570
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 79/252 (31%), Gaps = 35/252 (13%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH----PLADTINRK 79
L+ L P + W+G YVG H+ + T P +I
Sbjct: 8 LSAALLTPSGTSQAADLARPAAPLAGAVWTWTGFYVGAHLGAGFGTVKVDNPYGPSIYGD 67
Query: 80 TYNSLLPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTFYRLKEKYFI--------- 128
T + G++ G+N Q+ +V GI +A D T L
Sbjct: 68 TIR-VPKALAGLQAGYNWQVPGSPWVLGIELDASALDADGTDTCLAYSGQFVSANCRVRE 126
Query: 129 --YGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
G V + G L Y GG D ++ D + D
Sbjct: 127 HALGTVTGRIGRVFGPQGRSLAYLKGG-AAVLAGDLTMTTNAVDYLNQPAAKLDATRWGW 185
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA-------------KSDVERVDRKGN 230
+G GL+Y ++ ++ A Y Y +++ + + + +
Sbjct: 186 TVGAGLEYGLSSGWTVKAEYDYAAFGRRGIDSPDGGFLQIPNDPSSLINTVGAATQARQD 245
Query: 231 AHIASLGINMHF 242
H+ LG+N +F
Sbjct: 246 MHLVKLGLNYYF 257
>gi|217977073|ref|YP_002361220.1| porin [Methylocella silvestris BL2]
gi|217502449|gb|ACK49858.1| porin [Methylocella silvestris BL2]
Length = 239
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 16/205 (7%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS--LLPNGL--GIELGHNIQLED 101
Y WSG Y+G I + + L+ ++ P+G+ G +G+N+Q
Sbjct: 33 YAPAPIFTWSGLYLGGQIGYGWANNALSGWGPFFVFSGASYNPSGVLGGAHVGYNLQFNQ 92
Query: 102 FVFGINCHTTAAKDDSTFY----RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
V G+ A D T+ + + G + + G++VD L Y GG A V
Sbjct: 93 IVLGLEGDVEATGVDKTYAFGPTVYTTQIPVQGSIRARFGFAVDRALFYVTGGAAFASVT 152
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + ++ + + +G GL+Y + + S+ A YRY +
Sbjct: 153 NQYQSYLGYNSLNRSF-------AGWTIGGGLEYALTNNWSVRAEYRYSDFGTATDYTFT 205
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
A V R + A +G + F
Sbjct: 206 AGPG-GNVARHLTENAARVGFSYKF 229
>gi|298292421|ref|YP_003694360.1| porin [Starkeya novella DSM 506]
gi|296928932|gb|ADH89741.1| porin [Starkeya novella DSM 506]
Length = 215
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 20/200 (10%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDF 102
+ W+G Y+G + + + + L G ++G N Q +
Sbjct: 35 PAVIAEPVFSWTGFYLGANAGYAWGSGQEGAETLGLDPDGFLGGG---QIGFNYQFDNNV 91
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
V G + + K +G V + GY+ ++L Y GG +
Sbjct: 92 VLGAEADFQGSDIKDERLGFESKMDYFGTVRARLGYAFGNVLPYVTGGLAWGHTEV---- 147
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
N K D +G G++Y + ++ A Y Y+ + KS +
Sbjct: 148 -----NDKLLGLTSDKTAVGWTVGGGVEYAFTNNWTVKAEYLYMDLGDDYYASIGDKSGL 202
Query: 223 ERVDRKGNAHIASLGINMHF 242
A++ GIN F
Sbjct: 203 T-------ANVVRAGINYKF 215
>gi|91975275|ref|YP_567934.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91681731|gb|ABE38033.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 454
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 72/214 (33%), Gaps = 27/214 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI----ELGHNIQLED 101
Y W+G Y+G + + G ++G+N Q +
Sbjct: 243 YIAPPPANWAGLYIGGNFGGSATARNRTTATIGGFTEQFNLSPEGFIGGGQIGYNWQAAN 302
Query: 102 FVFGINCHTTAA--KDDST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+VFG + KDD T +K +G + GYSV S L+Y GG+
Sbjct: 303 WVFGAEADFQGSTQKDDRTAVFGSTVAYNQKLPWFGTARARLGYSVGSTLLYATGGYAYG 362
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPH 208
V + + + ++ S ++ S +G G++ + + + Y Y+
Sbjct: 363 NVKTNIVTPLSNETSNRSR-------SGYAVGGGVEMPFSLFGLLGPNWTSKTEYLYVDL 415
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ K H+ GIN HF
Sbjct: 416 GST---TDVFAGGLGVSTSKVTEHMVRTGINYHF 446
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 62/210 (29%), Gaps = 32/210 (15%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLL-----PNGLGIELGHNIQ----LEDF 102
W+G Y+G ++ + + + G ++G+N Q
Sbjct: 37 YDWTGFYIGGNVGVGVGRNLQSHVFPAGGVANSSYLQPQGVIGGGQIGYNWQTNSVFGPL 96
Query: 103 VFGINCHTTAAKDDSTFYR------------LKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ G+ + +K + V + G + ++ Y GG
Sbjct: 97 LIGVEADIQGSGMSDGRTTLNTLNGVLGTVNYNQKLDWFTTVRGRIGIARGPVVSYFTGG 156
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
F V + E G + V+G G++ + + + Y Y+
Sbjct: 157 FAAGDVKTTVTE------VGLVPFNLSGTRTGWVIGSGVEAALGGNWTGKIEYLYLDLGN 210
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ R + + N I +G+N
Sbjct: 211 R---TDVFGTQSLRTELREN--IFRVGLNY 235
>gi|312114480|ref|YP_004012076.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311219609|gb|ADP70977.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 288
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 74/235 (31%), Gaps = 47/235 (20%)
Query: 54 WSGNYVGLHISRLYETHPL---------------ADTINRKTYNSLLPNGLGIELGHNIQ 98
W+G Y G H+ + T K N G G + G+N Q
Sbjct: 45 WTGFYFGGHLGAAWTQLETRKNEYWDGYDDSDLSFATFGGKNLNDQSAFGGG-QFGYNWQ 103
Query: 99 LE-DFVFGINCHTTAAKDD--------------------STFYRLKEKYFIYGDVVLKAG 137
+FV GI D + +K + YGDV + G
Sbjct: 104 TGGNFVLGIEVDIGGLGSDNERTFLATTYNDVTFSSAYSTAVVNVKSEGGFYGDVTGRLG 163
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKV----ESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
Y+ + L+Y GGF V + + + + +D + +G GL++++
Sbjct: 164 YAWGNTLLYAKGGFAWIQPELKVRTVVSIDDDPNGTYTSSHTYDDTLTGWTIGGGLEFLL 223
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR------KGNAHIASLGINMHF 242
N + S+ Y + + + NN + LG+N
Sbjct: 224 NPNWSVKVEYLHYDFELDNNNNRRWNDWDVDYNNWRLFKDSFTVDTVKLGVNYKL 278
>gi|158425585|ref|YP_001526877.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332474|dbj|BAF89959.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 212
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 80/232 (34%), Gaps = 35/232 (15%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
S++ ++A DL P + W+G Y+G + +
Sbjct: 12 ASLLFAAPAMAADLSRPAPAMPASAVS------APPVFSWTGFYIGANTGYAW-----GS 60
Query: 75 TINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
L P+G G ++G+N Q + + G+ + + K +G
Sbjct: 61 GKGSADALGLDPDGWFGGGQVGYNYQFQNNMLVGLEADVQGGGISAGNGPVSSKLESFGT 120
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
V + GY+VD +L Y GGF + +S + +G G++Y
Sbjct: 121 VRARLGYAVDRVLPYVTGGFAWGNNKITDFGTSQSQTL-----------TGWTVGGGVEY 169
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
+ + + A Y Y K+D + + G A A LG+N F
Sbjct: 170 ALTNNWTARAEYLYTDL---------GKADYKALGEAGVAASTARLGVNYKF 212
>gi|312113917|ref|YP_004011513.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
gi|311219046|gb|ADP70414.1| hypothetical protein Rvan_1143 [Rhodomicrobium vannielii ATCC
17100]
Length = 292
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/290 (18%), Positives = 95/290 (32%), Gaps = 73/290 (25%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
+V N +LA DLY + Y+ +W G Y+G H+ + + DT
Sbjct: 1 MVAGNSALAADLYG-----RGGGLKDGPFYEAPA--LWQGFYLGGHVGAAWSKADVDDTF 53
Query: 77 -------NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF---------- 119
+ N+ G G +LG+N Q +FVFG+ K D++
Sbjct: 54 IYVGDPTYKGDLNTTSLTGGG-QLGYNFQRGNFVFGVEGDIGYLKVDASKDVAFRPTSCV 112
Query: 120 --------------------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI-- 157
+ +YGD+ + GY+ D L Y GG
Sbjct: 113 GTYTSAPYTVNYDPKMCAVDTKYSASGDLYGDITGRLGYAFDRTLFYAKGGVAFLNGEFD 172
Query: 158 ------DSSLEKVESDNSKNAKGRFDGHG----SSVVLGIGLDYMVNYDISLSASYRYIP 207
+ + +S NA +FD +G+G++Y + SL A Y++
Sbjct: 173 AKYLGQNCASLGSDSHCLGNALSKFDYSHSETLVGWTIGVGVEYKLTPSWSLKAEYQHFN 232
Query: 208 HH---------------IHSVNNSNAKSDVER-VDRKGNAHIASLGINMH 241
+ + S ++ A ++G+N H
Sbjct: 233 FGSISYSYNDSYKIPANNVDYSGGHYHSTLDGKTKVDFTADAVTVGLNYH 282
>gi|188581225|ref|YP_001924670.1| carbohydrate-selective porin OprB [Methylobacterium populi BJ001]
gi|179344723|gb|ACB80135.1| Carbohydrate-selective porin OprB [Methylobacterium populi BJ001]
Length = 703
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 70/229 (30%), Gaps = 43/229 (18%)
Query: 49 DEYGIWSGNYVGLHI--SRLYETHPLADTI----------------NRKTYNSLLPNGLG 90
+ WSG Y G+ + + + T +R G
Sbjct: 41 PRFLDWSGLYAGVQGSAGASFGNYDIGPTTIGTRRVRTISTGDATGSRDLGGDATTVAAG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAAK----------------DDSTFYRLKEKYFIYGDVVL 134
G N Q V+G+ D F ++EK ++G
Sbjct: 101 AFAGWNWQDGAIVYGLEADLAGTNLKRGARSDAPGFGYEAVDPPFALVREKTDLFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYV-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ + LIY G GA + ++ + + A LG G+ + V
Sbjct: 161 RLGYAFGNNLIYATFGLTGANGRVLATYPDLSGGPTATAARNVSY--LGYTLGAGVQFAV 218
Query: 194 NYDISLSASYRYIP------HHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +SL YRY + ++ ++ R N +A L
Sbjct: 219 DPHLSLGIDYRYSDLGESARFGLGTLPGADGGPVTTRTGFVSNKMMARL 267
>gi|83308665|emb|CAJ01573.1| outer membrane protein [uncultured bacterium]
Length = 275
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 33/187 (17%)
Query: 52 GIWSGNYVGLHISRLYETHP------LADTINRKTYNSLLPNGL--GIELGHNIQLEDF- 102
WSG Y+G+ + + + P L + +L P G+ G +G+N+Q ++
Sbjct: 51 FTWSGLYLGVQVGYAWGSDPVDEVDVLTPRFANNAFFNLQPKGVLGGAHVGYNLQFTNWN 110
Query: 103 -------VFGINCHTTA-----AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
V G+ + ++ ++ + G + + G + D LLIYG GG
Sbjct: 111 WLSSSGVVIGLEGSVDGSSLSGTRTSASGLTMRLRTETQGSLRARIGLAWDRLLIYGTGG 170
Query: 151 -----FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
F YV + + + +G G+DY + + S+ YRY
Sbjct: 171 AAFAGFDDNYVTVFGTPFFVDEQDSKTR-------TGWTVGGGVDYAITPNWSIGVEYRY 223
Query: 206 IPHHIHS 212
+
Sbjct: 224 SDFGRTT 230
>gi|265984654|ref|ZP_06097389.1| outer membrane protein 31b [Brucella sp. 83/13]
gi|264663246|gb|EEZ33507.1| outer membrane protein 31b [Brucella sp. 83/13]
Length = 261
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 105/266 (39%), Gaps = 51/266 (19%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + + W+G Y+G++
Sbjct: 13 LLASVAMLFTSSAMAADIIVAEPAPVAVDT-----------FSWTGGYIGINAGYAGGKF 61
Query: 70 -HPLADTINRKTYN-----SLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------- 113
HP +D + + + +G G++ G+N QL + V G +
Sbjct: 62 KHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKSKLV 121
Query: 114 --------------KDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI- 157
D +F L+ K +G V + G++ + L++YG GG V
Sbjct: 122 DNGDLSDVGVAGNLSGDESFG-LETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKT 180
Query: 158 -DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N
Sbjct: 181 SLSAYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYI 235
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ ++ K N H +G+N F
Sbjct: 236 DEENVNVNMENKVNFHTVRIGLNYKF 261
>gi|163844591|ref|YP_001622246.1| hypothetical protein BSUIS_B0425 [Brucella suis ATCC 23445]
gi|16611654|gb|AAL27287.1|AF366064_1 outer membrane protein Omp31 [Brucella suis ATCC 23445]
gi|163675314|gb|ABY39424.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 240
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDIEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWPDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|161620493|ref|YP_001594379.1| porin [Brucella canis ATCC 23365]
gi|16611681|gb|AAL27296.1|AF366073_1 outer membrane protein Omp31 [Brucella canis]
gi|161337304|gb|ABX63608.1| porin [Brucella canis ATCC 23365]
Length = 240
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGPISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|306845687|ref|ZP_07478256.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|206596728|emb|CAQ68394.1| outer membrane protein 31 [Brucella sp. BO1]
gi|306274008|gb|EFM55835.1| outer membrane protein Omp31 [Brucella sp. BO1]
Length = 240
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 80/227 (35%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + D ++
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSAFDTDDNERVSGSLNITSG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTAAKDDSTF--------YRLKEKYFIYGDVVLKA 136
G G++ G+N Q ++ V G + + + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQFDNGVVLGAETDFQGSSVTGSISADAGGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D+ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDVSALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+L + Y Y ++ N + ++ K N H +G+N F
Sbjct: 198 HWTLKSEYLYTDLGKRNLINVDDSF----LESKVNFHTVRVGLNYKF 240
>gi|296448558|ref|ZP_06890432.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
gi|296253924|gb|EFH01077.1| TonB-dependent receptor [Methylosinus trichosporium OB3b]
Length = 482
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 76/220 (34%), Gaps = 26/220 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDE--YGIWSGNYVGLHISRL 66
LF + L P+ + A P + + + + W G YVG +
Sbjct: 246 LFAGITLRAKFPSAAGA-----PAFLASALPSSDLPSKKGPPGSRYDWRGVYVGFDVGHA 300
Query: 67 YETH---PLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAK-----DD 116
+ P N S G+ G+ G+N QL V G+ A
Sbjct: 301 WGHDRFVPYYSVPNVGAPQSFDLTGVIGGLHAGYNWQLASVVLGVETEFDATSLNRTVQQ 360
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS-SLEKVESDNSKNAKGR 175
L+ + G + + G++ D LL++G GG A V ++ + + S N
Sbjct: 361 DAVTTLRSSSALQGSIRARFGWAFDRLLVFGTGGSQWAGVQNAYHIRGLGDSYSTNHH-- 418
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
S V+G G++Y + A YR+ + N
Sbjct: 419 ------SWVVGGGIEYALTDHWLGRAEYRFSDFGKNLDGN 452
>gi|86751713|ref|YP_488209.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86574741|gb|ABD09298.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 449
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 81/218 (37%), Gaps = 31/218 (14%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLE 100
N Y W+G Y+G + + ++ +L P+G G ++G+N Q
Sbjct: 237 NGMYITPPPANWAGLYLGGNFGGATARNRTTSSVIFSENFNLSPDGFVGGGQIGYNWQAS 296
Query: 101 DFVFGINCHTTAA--KDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
++VFG + KDD S+ +K +G + GY+V S L Y GG+
Sbjct: 297 NWVFGAEADFQGSTQKDDRAAVLSSLLLYNQKLPWFGTARARLGYTVGSTLFYATGGYAY 356
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY------MVNYDISLSASYRYIP 207
V + + ++ F+ S +G G++ ++ + + Y Y+
Sbjct: 357 GNVKTNVVTAFSNET-------FNRSRSGYAVGAGVETPFQLFGLLGPNWTSKTEYLYVD 409
Query: 208 HH---IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + K H+ GIN HF
Sbjct: 410 LGSTTDSFLGGAAVSTS------KVTNHMLRTGINYHF 441
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 63/208 (30%), Gaps = 27/208 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLP---NGLGIELGHNIQ-----LED 101
W+G Y+G ++ + S L G ++G+N Q L
Sbjct: 35 AVYDWTGFYIGANVGVGLGRDLQTHAVPAGGVASHLSPQGVIGGGQIGYNWQSNTTFLGP 94
Query: 102 FVFGINCHTTAAKDDSTFYRLKE---------KYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+ G+ + L K + V + G ++ Y GGF
Sbjct: 95 LLIGVEADIQGSGMTDGHTTLSSPLGAANYNQKLDWFTTVRGRVGLVRGPVVGYFTGGFA 154
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A V + + F + +G G++ + + + Y Y+
Sbjct: 155 AANVKTTV-----TQIGGIVPFAFSETRTGWTIGSGVEAAIGGNWTGKIEYLYLD----- 204
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINM 240
+ N N + + + I +G+N
Sbjct: 205 LGNRNDVFGTQALRTEYRESIFRVGLNY 232
>gi|23500173|ref|NP_699613.1| outer membrane protein [Brucella suis 1330]
gi|225628865|ref|ZP_03786899.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225686232|ref|YP_002734204.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|254699679|ref|ZP_05161507.1| outer membrane protein Omp31 precursor [Brucella suis bv. 5 str.
513]
gi|254702817|ref|ZP_05164645.1| outer membrane protein Omp31 precursor [Brucella suis bv. 3 str.
686]
gi|254711636|ref|ZP_05173447.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
B2/94]
gi|254712249|ref|ZP_05174060.1| outer membrane protein Omp31 precursor [Brucella ceti M644/93/1]
gi|254715320|ref|ZP_05177131.1| outer membrane protein Omp31 precursor [Brucella ceti M13/05/1]
gi|256015206|ref|YP_003105215.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|256029730|ref|ZP_05443344.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
M292/94/1]
gi|256043319|ref|ZP_05446254.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 1
str. Rev.1]
gi|256059364|ref|ZP_05449566.1| outer membrane protein Omp31 precursor [Brucella neotomae 5K33]
gi|256157882|ref|ZP_05455800.1| outer membrane protein Omp31 precursor [Brucella ceti M490/95/1]
gi|256253156|ref|ZP_05458692.1| outer membrane protein Omp31 precursor [Brucella ceti B1/94]
gi|256262636|ref|ZP_05465168.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|260167181|ref|ZP_05753992.1| outer membrane protein, 31 kDa [Brucella sp. F5/99]
gi|260564527|ref|ZP_05835012.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|261217050|ref|ZP_05931331.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261220262|ref|ZP_05934543.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261319260|ref|ZP_05958457.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261319920|ref|ZP_05959117.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261323324|ref|ZP_05962521.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261750144|ref|ZP_05993853.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261753417|ref|ZP_05997126.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261756585|ref|ZP_06000294.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265986741|ref|ZP_06099298.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265989742|ref|ZP_06102299.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265996391|ref|ZP_06108948.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|61229373|sp|P0A3U4|OM31_BRUME RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|61229374|sp|P0A3U5|OM31_BRUSU RecName: Full=31 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|16611645|gb|AAL27284.1|AF366061_1 outer membrane protein Omp31 [Brucella melitensis]
gi|16611651|gb|AAL27286.1|AF366063_1 outer membrane protein Omp31 [Brucella suis 1330]
gi|16611657|gb|AAL27288.1|AF366065_1 outer membrane protein Omp31 [Brucella suis]
gi|16611663|gb|AAL27290.1|AF366067_1 outer membrane protein Omp31 [Brucella suis]
gi|16611684|gb|AAL27297.1|AF366074_1 outer membrane protein Omp31 [Brucella neotomae]
gi|1457933|gb|AAB36693.1| outer membrane protein [Brucella melitensis]
gi|23463773|gb|AAN33618.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251186|gb|AAS84564.1| Omp31 [Brucella ceti]
gi|46251188|gb|AAS84565.1| Omp31 [Brucella pinnipedialis]
gi|46251190|gb|AAS84566.1| Omp31 [Brucella ceti]
gi|46251192|gb|AAS84567.1| Omp31 [Brucella ceti]
gi|157310315|emb|CAN43870.1| outer membrane protein 31 [Brucella microti CCM 4915]
gi|157310317|emb|CAN43872.1| outer membrane protein 31 [Brucella microti]
gi|225616711|gb|EEH13759.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225642337|gb|ACO02250.1| outer membrane protein Omp31 precursor [Brucella melitensis ATCC
23457]
gi|226433917|gb|ACO56077.1| Omp31 [Brucella melitensis]
gi|240265888|gb|ACS50328.1| Omp31 [Brucella melitensis]
gi|255997866|gb|ACU49553.1| outer membrane protein, 31 kDa [Brucella microti CCM 4915]
gi|260152170|gb|EEW87263.1| outer membrane protein 31 [Brucella melitensis bv. 1 str. 16M]
gi|260918846|gb|EEX85499.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260922139|gb|EEX88707.1| outer membrane immunogenic protein [Brucella ceti M13/05/1]
gi|261292610|gb|EEX96106.1| outer-membrane immunogenic protein [Brucella ceti M644/93/1]
gi|261298483|gb|EEY01980.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261299304|gb|EEY02801.1| outer-membrane immunogenic protein [Brucella neotomae 5K33]
gi|261736569|gb|EEY24565.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261739897|gb|EEY27823.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261743170|gb|EEY31096.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262550688|gb|EEZ06849.1| outer-membrane immunogenic protein [Brucella ceti M490/95/1]
gi|263000411|gb|EEZ13101.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092421|gb|EEZ16674.1| outer membrane protein Omp31 [Brucella melitensis bv. 2 str. 63/9]
gi|264658938|gb|EEZ29199.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 240
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|256682107|gb|ACV07678.1| OMP31 [Brucella melitensis]
Length = 240
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + +++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERVMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|254720536|ref|ZP_05182347.1| outer membrane protein Omp31 precursor [Brucella sp. 83/13]
gi|265985569|ref|ZP_06098304.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838097|ref|ZP_07470954.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
gi|264664161|gb|EEZ34422.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306406834|gb|EFM63056.1| outer membrane protein Omp31 [Brucella sp. NF 2653]
Length = 240
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + T D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSTFDTEDNEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLEDF-VFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGGVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRIGLNYKF 240
>gi|306841014|ref|ZP_07473744.1| outer membrane protein Omp31 [Brucella sp. BO2]
gi|306846349|ref|ZP_07478900.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306273192|gb|EFM55083.1| outer membrane protein Omp31 [Brucella sp. BO1]
gi|306288964|gb|EFM60252.1| outer membrane protein Omp31 [Brucella sp. BO2]
Length = 239
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 78/216 (36%), Gaps = 36/216 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL---------------GIELGHN 96
W+G Y+G++ ++ + G G++ G+N
Sbjct: 35 FSWTGGYIGINAGYAGGKFKHPFSVAGLPTAGMNEEGGALSGSLDVTSSGFVGGVQAGYN 94
Query: 97 IQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIY 146
QL++ FV G A D + K +G V + GY + + LL+Y
Sbjct: 95 WQLDNGFVLGAEADFQGSTVKGDISAHLDDLDGNAETKVEWFGTVRARLGYTATERLLVY 154
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG V S +E ++K + + +G G +Y +N + +L + Y Y
Sbjct: 155 GTGGLAYGKVKSSL--GIEDWGVSSSKTK-----AGWTVGAGAEYAINNNWTLKSEYLYT 207
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
H + N N S + H +G+N F
Sbjct: 208 DLGKHDLINVNELS----LKNDVKFHTVRVGLNYKF 239
>gi|254719645|ref|ZP_05181456.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|306837721|ref|ZP_07470589.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|306407177|gb|EFM63388.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 253
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 105/266 (39%), Gaps = 51/266 (19%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
+ ++++ + ++A D+ + + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAPVAVDT-----------FSWTGGYIGINAGYAGGKF 53
Query: 70 -HPLADTINRKTYN-----SLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------- 113
HP +D + + + +G G++ G+N QL + V G +
Sbjct: 54 KHPFSDVEPDRGEDFSGSLDVTASGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKSKLV 113
Query: 114 --------------KDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI- 157
D +F L+ K +G V + G++ + L++YG GG V
Sbjct: 114 DNGDLSDVGVAGNLSGDESFG-LETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKT 172
Query: 158 -DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N
Sbjct: 173 SLSAYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYI 227
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ ++ K N H +G+N F
Sbjct: 228 DEENVNVNMENKVNFHTVRIGLNYKF 253
>gi|62290498|ref|YP_222291.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82700421|ref|YP_414995.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|237816005|ref|ZP_04595002.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260547029|ref|ZP_05822768.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755331|ref|ZP_05867679.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260758554|ref|ZP_05870902.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260762376|ref|ZP_05874719.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260884349|ref|ZP_05895963.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|261214598|ref|ZP_05928879.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297248879|ref|ZP_06932597.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|46251194|gb|AAS84568.1| Omp31b [Brucella abortus]
gi|62196630|gb|AAX74930.1| Omp31-1, outer membrane protein, 31 kDa [Brucella abortus bv. 1
str. 9-941]
gi|82616522|emb|CAJ11595.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|237789303|gb|EEP63514.1| OmpA-like transmembrane domain protein [Brucella abortus str. 2308
A]
gi|260096079|gb|EEW79956.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260668872|gb|EEX55812.1| outer membrane protein 31b [Brucella abortus bv. 4 str. 292]
gi|260672808|gb|EEX59629.1| outer membrane protein 31b [Brucella abortus bv. 2 str. 86/8/59]
gi|260675439|gb|EEX62260.1| outer membrane protein 31b [Brucella abortus bv. 6 str. 870]
gi|260873877|gb|EEX80946.1| Omp31b [Brucella abortus bv. 9 str. C68]
gi|260916205|gb|EEX83066.1| outer membrane protein 31b [Brucella abortus bv. 3 str. Tulya]
gi|297176048|gb|EFH35395.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 261
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 100/265 (37%), Gaps = 49/265 (18%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR----- 65
+ ++++ + ++A D+ + + + W+G Y+G++
Sbjct: 13 LLASVAMLFTSSAMAADIIVAEPAPVAVDT-----------FSWTGGYIGINAGYAGGKF 61
Query: 66 --LYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDSTF- 119
+ + + +G G++ G+N QL + V G + S
Sbjct: 62 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 121
Query: 120 -------------------YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI-- 157
+ L+ K +G V + G++ + L++YG GG V
Sbjct: 122 DNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 181
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N +
Sbjct: 182 LSAYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYID 236
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
++ ++ K N H LG+N F
Sbjct: 237 EENVNINMENKVNFHTVRLGLNYKF 261
>gi|254706065|ref|ZP_05167893.1| outer membrane protein Omp31 precursor [Brucella pinnipedialis
M163/99/10]
gi|261313502|ref|ZP_05952699.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M163/99/10]
gi|261302528|gb|EEY06025.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M163/99/10]
Length = 240
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFFSFDKEDNEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|256111680|ref|ZP_05452664.1| outer membrane protein Omp31 precursor [Brucella melitensis bv. 3
str. Ether]
gi|265993151|ref|ZP_06105708.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|16611648|gb|AAL27285.1|AF366062_1 outer membrane protein Omp31 [Brucella melitensis]
gi|262764021|gb|EEZ10053.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
Length = 240
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHMWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|260568272|ref|ZP_05838741.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
gi|16611660|gb|AAL27289.1|AF366066_1 outer membrane protein Omp31 [Brucella suis]
gi|260154937|gb|EEW90018.1| outer membrane protein Omp31 [Brucella suis bv. 4 str. 40]
Length = 240
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 81/227 (35%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDATAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|148558438|ref|YP_001257410.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840]
gi|16611666|gb|AAL27291.1|AF366068_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611669|gb|AAL27292.1|AF366069_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611672|gb|AAL27293.1|AF366070_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611675|gb|AAL27294.1|AF366071_1 outer membrane protein Omp31 [Brucella ovis]
gi|16611678|gb|AAL27295.1|AF366072_1 outer membrane protein Omp31 [Brucella ovis]
gi|148369723|gb|ABQ62595.1| outer membrane protein Omp31 [Brucella ovis ATCC 25840]
Length = 240
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D + +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDGEHVSGSPDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A S + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAETDFQGLSVTGSISAGASSLEGNAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDAPALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|189024724|ref|YP_001935492.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|254689800|ref|ZP_05153054.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 6 str. 870]
gi|254694291|ref|ZP_05156119.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 3 str. Tulya]
gi|254697943|ref|ZP_05159771.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 2 str. 86/8/59]
gi|254730834|ref|ZP_05189412.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 4 str. 292]
gi|256258053|ref|ZP_05463589.1| OmpA-like transmembrane domain-containing protein [Brucella abortus
bv. 9 str. C68]
gi|189020296|gb|ACD73018.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
Length = 253
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 100/265 (37%), Gaps = 49/265 (18%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR----- 65
+ ++++ + ++A D+ + + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAPVAVDT-----------FSWTGGYIGINAGYAGGKF 53
Query: 66 --LYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDSTF- 119
+ + + +G G++ G+N QL + V G + S
Sbjct: 54 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 113
Query: 120 -------------------YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI-- 157
+ L+ K +G V + G++ + L++YG GG V
Sbjct: 114 DNGDLSDIGVAGNLSGDESFVLETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTS 173
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N +
Sbjct: 174 LSAYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYID 228
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
++ ++ K N H LG+N F
Sbjct: 229 EENVNINMENKVNFHTVRLGLNYKF 253
>gi|27377055|ref|NP_768584.1| hypothetical protein bll1944 [Bradyrhizobium japonicum USDA 110]
gi|27350198|dbj|BAC47209.1| bll1944 [Bradyrhizobium japonicum USDA 110]
Length = 825
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 70/229 (30%), Gaps = 26/229 (11%)
Query: 34 IDLFNEADNNVEYQDDEY--GIWSGNYVGLHIS----RLYETHPLADTINRKTYNSLLPN 87
+D N ++ + W+G Y+G I R + P T Y L
Sbjct: 597 LDTAQAKANGIDKEPPPVMPTNWAGVYLGGTIGAGKGRSHYADPF-PTPVSGDYADLGGA 655
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK-------------EKYFIYGDVVL 134
G ++G N Q +V G+ A T + G +
Sbjct: 656 MFGGQIGINYQTGSWVLGLEASGYWANVQGTNTCFGAFPSPQIAGFNCGSQIDALGALTG 715
Query: 135 KAGYSVDSLLIYGMGGFGG-AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ D L+Y GG + + N + +G GL+Y +
Sbjct: 716 RVGYAFDRTLLYVKGGSAWDRQTNQFNTGGISGTILTNGNTNW-----GWTVGGGLEYAL 770
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S++ Y+Y V + V SLG+N
Sbjct: 771 LPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYKL 819
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 29/237 (12%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEY-GIWSGNYVGLHISRLYETHPL-------ADTINRK 79
LY P W+G YVG H+ + + AD NR
Sbjct: 73 LYGPAHAADLPVKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQTATGLQADFSNRG 132
Query: 80 TYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDS---TFYRLKEKYFI------ 128
S GL G ++G N Q +V G+ +AA D R +Y +
Sbjct: 133 FPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANRADNRYGVISFTCD 192
Query: 129 -----YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
G + + G + +LLIYG G A + + + R+
Sbjct: 193 NRVTSLGTIAGRLGQTWGNLLIYGKAGAAWATDESDARTSHYINKFNQSGTRW-----GW 247
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ G+GL+Y + ++S Y + N + ++ V + + G+N
Sbjct: 248 MGGLGLEYAFSPNLSAFVEYDHFDFGSKDSNYVDQFNNASTVGFRQRFDMIKAGVNY 304
>gi|39935611|ref|NP_947887.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39649464|emb|CAE27986.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 997
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 20/207 (9%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG---------LGIELGHNIQL 99
W+G Y+G H+ + P GI+ G+N Q
Sbjct: 36 PAATNWTGFYIGTHVGAAASESAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQF 95
Query: 100 EDFVFGINCHTTAAKDDST------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
++V GI + + + + + + GY+ LL+YG G
Sbjct: 96 GNYVLGIEGDASFGSINGLARCLHGTFACTSRIDELWTLAARFGYAAGDLLVYGKAGAAW 155
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A V + + ++ R S +LG G++Y +S Y Y S+
Sbjct: 156 ADVHRRMASGNFVNVLEASETR-----SGWLLGAGVEYAFLPGLSAKIEYNYADFGNRSL 210
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINM 240
++ DV V AH+ +G+N
Sbjct: 211 TMADQFGDVSDVSIGQTAHLVKVGLNY 237
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 69/210 (32%), Gaps = 23/210 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG---LGIELGHNIQLEDFVFGINC 108
W+G YVG + + AD T G LG ++G N Q V G+
Sbjct: 784 TNWTGLYVGASVGAGWGRTTYADPFPTPTTGDRADLGGALLGGQIGANYQFGHLVAGVEA 843
Query: 109 HTTAAKD---DSTFYRLKE----------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
A D+ F + G + GY++D L+Y GG
Sbjct: 844 SANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAIGAFTARGGYAIDRTLLYVKGGAAWDR 903
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
V + A + +G GL+Y + S++ Y+Y +
Sbjct: 904 -QQDQFNTVGVGGTTLASTSTNW---GWTVGGGLEYALAPSWSMALEYKYFDFGASPAFS 959
Query: 216 SNAKSDVERVDR---KGNAHIASLGINMHF 242
++ ++ V+ SLG+N F
Sbjct: 960 TSVTPALDGVNLAPQTNKLQTVSLGVNYKF 989
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 32/213 (15%)
Query: 54 WSGNYVGLHISRLYETHPL-------------ADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G+H + ++ R + L G ++G N Q
Sbjct: 259 WTGIYLGVHAGGGFGSNDWDSATGALLAASTSGGFPGRGDSSGLFGGG---QIGANYQFG 315
Query: 101 DFVFGINC-----HTTAAKDDST------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+V G+ +T + + G + + G + +LLIYG
Sbjct: 316 RWVAGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGTITGRLGQTWGNLLIYGKA 375
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G A + + S + G V G GL+Y ++ ++S Y ++
Sbjct: 376 GAAWA----TGSSDAQRAGSASRFTE-SGTRWGWVTGTGLEYALSPNLSAFVEYNHVDFG 430
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + V K + G+N
Sbjct: 431 TQDTAYVDQFGNASEVGFKQKFDLVKAGLNYRL 463
>gi|163851436|ref|YP_001639479.1| carbohydrate-selective porin OprB [Methylobacterium extorquens PA1]
gi|163663041|gb|ABY30408.1| Carbohydrate-selective porin OprB [Methylobacterium extorquens PA1]
Length = 703
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 69/229 (30%), Gaps = 43/229 (18%)
Query: 49 DEYGIWSGNYVGLHI--SRLYETHPLADTINRKTYNSLLPNGL----------------G 90
+ WSG Y G+ + + T + G G
Sbjct: 41 PRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDATTAVGG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAA----------------KDDSTFYRLKEKYFIYGDVVL 134
G N Q V+GI A D F ++EK ++G
Sbjct: 101 AFAGWNWQDGALVYGIEADLVGANLKRGARSDATGFGYEGIDPPFALIREKTDVFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYV-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ + LIY G GA + ++ + + A LG G+ + V
Sbjct: 161 RLGYAFGNNLIYATAGLTGANGRVLATYPDLAGGPTATATRNVSY--LGFTLGAGVQFAV 218
Query: 194 NYDISLSASYRYIP------HHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +SL YRY + ++ + R N +A L
Sbjct: 219 DPHLSLGIDYRYSDLGESGRFGLGTLPGPDGGPVTTRTSFVSNKMMARL 267
>gi|192291549|ref|YP_001992154.1| hypothetical protein Rpal_3175 [Rhodopseudomonas palustris TIE-1]
gi|192285298|gb|ACF01679.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 566
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 35/222 (15%)
Query: 54 WSGNYVGLHISRLYET----HPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGIN 107
W+G Y+G H+ + T +P +I T + G++ G+N Q +V G+
Sbjct: 38 WTGFYLGGHLGAGFGTAKVDNPFGPSIYGDTVRAPKALA-GLQAGYNWQAHGSPWVLGVE 96
Query: 108 CHTTAAKDDSTFYRLKEKYFIY-----------GDVVLKAGYSVD---SLLIYGMGGFGG 153
+A D T L G + + G++ L+Y GG G
Sbjct: 97 VDASAIDADGTNTCLAYSGQFVSANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGG-GA 155
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + D D +G G+++ ++ ++ A Y Y +
Sbjct: 156 FLFGNFRMTTNAPDYLNQPSAELDTTRWGWTVGAGIEHALSSRWAVRAEYDYANFGHRGI 215
Query: 214 NNSNA-------------KSDVERVDRKGNAHIASLGINMHF 242
+ + + + H+ LG+N +F
Sbjct: 216 DGPGGGFLQTPFNPRTLVDTAGAPTQVRQDMHLIKLGLNYYF 257
>gi|192291194|ref|YP_001991799.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
gi|192284943|gb|ACF01324.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
Length = 997
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 70/209 (33%), Gaps = 20/209 (9%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG---------LGIELGHNIQL 99
W+G Y+G H+ + P GI+ G+N Q
Sbjct: 36 PAATNWTGFYIGTHVGAAASDSAWNSIAGSGAGLAAGPFPGHGVSGNAIAGIQGGYNAQF 95
Query: 100 EDFVFGINCHTTAAKDDST------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
++V GI + + + + + + GY+ LL+YG G
Sbjct: 96 GNYVLGIEGDASFGSINGLARCLHGTFACTSRIDELWTLAARFGYAAGDLLVYGKAGAAW 155
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A V + + ++ R S +LG G++Y +S Y Y S+
Sbjct: 156 ADVHRRMASGNFVNVLEASETR-----SGWLLGAGVEYAFLPGLSAKIEYNYADFGSRSL 210
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ DV V AH+ +G+N
Sbjct: 211 TMADQFGDVSDVSIGQTAHLVKVGLNYRL 239
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 73/211 (34%), Gaps = 25/211 (11%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG---LGIELGHNIQLEDFVFGINC 108
W+G YVG + + AD T G LG ++G N Q V G+
Sbjct: 784 TNWTGLYVGASVGAGWGRTTYADPFPTPTTGDRADLGGALLGGQIGANYQFGHLVAGVEA 843
Query: 109 HTTAAKD---DSTFYRLKE----------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
A D+ F + G + GY++D L+Y GG
Sbjct: 844 SANWANIRGTDTCFGAYPNPVVAGFNCGSRIDAIGAFTARGGYAIDRTLLYVKGGAAWDR 903
Query: 156 VIDS-SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
D + V N + +G GL+Y + S++ Y+Y
Sbjct: 904 QQDQFNTVGVGGTTLANTSTNW-----GWTVGGGLEYALAPSWSMALEYKYFDFGASPAF 958
Query: 215 NSNAKSDVERVDRKGNAH---IASLGINMHF 242
+++ ++ V+ ++ ASLG+N F
Sbjct: 959 STSVTPALDGVNLAPQSNKLQTASLGVNYKF 989
Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 32/213 (15%)
Query: 54 WSGNYVGLHISRLYETHPL-------------ADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y+G+H + ++ R + L G ++G N Q
Sbjct: 259 WTGIYLGVHAGGGFGSNDWDSATGALLAASTSGGFPGRGDSSGLFGGG---QIGANYQFG 315
Query: 101 DFVFGINC-----HTTAAKDDST------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
+V G+ +T + + G + + G + +LLIYG
Sbjct: 316 RWVAGVEASAAAADIGGYAKCATDVGTRRNFTCHNELSSLGTITGRLGQTWGNLLIYGKA 375
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G A + + S + G V G GL+Y ++ ++S Y ++
Sbjct: 376 GAAWA----TGSSDAQRAGSASRFTE-SGTRWGWVTGTGLEYALSPNLSAFVEYNHVDFG 430
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + V K + G+N
Sbjct: 431 TQDTAYVDQFGNASEVGFKQKFDLVKAGLNYRL 463
>gi|23502485|ref|NP_698612.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|163843871|ref|YP_001628275.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225628052|ref|ZP_03786088.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256370036|ref|YP_003107547.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260169279|ref|ZP_05756090.1| outer membrane protein Omp31 [Brucella sp. F5/99]
gi|260565895|ref|ZP_05836365.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|261219740|ref|ZP_05934021.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261222753|ref|ZP_05937034.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|261315779|ref|ZP_05954976.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261318224|ref|ZP_05957421.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261322630|ref|ZP_05961827.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261325677|ref|ZP_05964874.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261752901|ref|ZP_05996610.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261755562|ref|ZP_05999271.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|261758791|ref|ZP_06002500.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|265989255|ref|ZP_06101812.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|265998716|ref|ZP_06111273.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|294852932|ref|ZP_06793605.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|23348478|gb|AAN30527.1| outer membrane protein Omp31 [Brucella suis 1330]
gi|46251200|gb|AAS84571.1| Omp31b [Brucella neotomae]
gi|46251202|gb|AAS84572.1| Omp31b [Brucella pinnipedialis]
gi|46251204|gb|AAS84573.1| Omp31b [Brucella ceti]
gi|46251206|gb|AAS84574.1| Omp31b [Brucella ceti]
gi|46251208|gb|AAS84575.1| Omp31b [Brucella ceti]
gi|157310319|emb|CAN43873.1| outer membrane protein 31b [Brucella microti CCM 4915]
gi|157310321|emb|CAN43874.1| outer membrane protein 31b [Brucella microti]
gi|163674594|gb|ABY38705.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225617215|gb|EEH14261.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|256000199|gb|ACU48598.1| outer membrane protein Omp31 [Brucella microti CCM 4915]
gi|260155413|gb|EEW90493.1| outer membrane protein 31b [Brucella suis bv. 4 str. 40]
gi|260921337|gb|EEX87990.1| outer membrane protein 31b [Brucella ceti B1/94]
gi|260924829|gb|EEX91397.1| outer membrane protein 31b [Brucella ceti M13/05/1]
gi|261295320|gb|EEX98816.1| outer membrane protein 31b [Brucella ceti M644/93/1]
gi|261297447|gb|EEY00944.1| outer membrane protein 31b [Brucella pinnipedialis B2/94]
gi|261301657|gb|EEY05154.1| outer membrane protein 31b [Brucella neotomae 5K33]
gi|261304805|gb|EEY08302.1| outer membrane protein 31b [Brucella pinnipedialis M163/99/10]
gi|261738775|gb|EEY26771.1| outer membrane protein 31b [Brucella sp. F5/99]
gi|261742654|gb|EEY30580.1| outer membrane protein 31b [Brucella suis bv. 5 str. 513]
gi|261745315|gb|EEY33241.1| outer membrane protein 31b [Brucella suis bv. 3 str. 686]
gi|262553340|gb|EEZ09174.1| outer membrane protein 31b [Brucella ceti M490/95/1]
gi|264661452|gb|EEZ31713.1| outer membrane protein 31b [Brucella pinnipedialis M292/94/1]
gi|294821521|gb|EFG38520.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 261
Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 101/266 (37%), Gaps = 51/266 (19%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR----- 65
+ ++++ + ++A D+ + + + W+G Y+G++
Sbjct: 13 LLASVAMLFTSSAMAADIIVAEPAPVAVDT-----------FSWTGGYIGINAGYAGGKF 61
Query: 66 --LYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------- 113
+ + + +G G++ G+N QL + V G +
Sbjct: 62 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 121
Query: 114 --------------KDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI- 157
D +F L+ K +G V + G++ + L++YG GG V
Sbjct: 122 DNGDLSDIGVAGNLSGDESFG-LETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKT 180
Query: 158 -DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N
Sbjct: 181 SLSAYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYI 235
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ ++ K N H LG+N F
Sbjct: 236 DEENVNINMENKVNFHTVRLGLNYKF 261
>gi|306840766|ref|ZP_07473513.1| outer membrane protein Omp31 [Brucella sp. BO2]
gi|306289161|gb|EFM60410.1| outer membrane protein Omp31 [Brucella sp. BO2]
Length = 223
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 78/210 (37%), Gaps = 26/210 (12%)
Query: 52 GIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED- 101
W+G Y+G++ + D ++ G G++ G+N QL++
Sbjct: 21 FSWTGGYIGINAGYAGGKFKHPFSAFDTDDNERVSGSLNITSGGFVGGVQAGYNWQLDNG 80
Query: 102 FVFGINCHTTAAKDDSTF--------YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFG 152
V G + + + + K +G V + GY + + L++YG GG
Sbjct: 81 VVLGAETDFQGSSVTGSISADAGGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLA 140
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
V + D+ D + LG G +Y +N + +L + Y Y +
Sbjct: 141 YGKVKSA---FNLGDDVSALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRN 197
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + ++ K N H +G+N F
Sbjct: 198 LIDVDDSF----LESKVNFHTVRVGLNYKF 223
>gi|326410582|gb|ADZ67646.1| outer membrane protein Omp31 [Brucella melitensis M28]
Length = 229
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 10 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAG 69
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 70 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 129
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 130 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 186
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 187 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 229
>gi|115522754|ref|YP_779665.1| porin [Rhodopseudomonas palustris BisA53]
gi|115516701|gb|ABJ04685.1| porin [Rhodopseudomonas palustris BisA53]
Length = 446
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 72/212 (33%), Gaps = 26/212 (12%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFV 103
Y W+G Y+G + T +L P+G G ++G+N Q ++V
Sbjct: 238 YAPAPVANWAGFYLGGNFGSGTARERTTATRVATEQFNLAPDGFIGGGQIGYNWQAANWV 297
Query: 104 FGINCHTTAAKDDSTFYRLK-------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FG + ++ K V + GYSV S L YG GG+ V
Sbjct: 298 FGGEADFQGSTQRDNRTIVQGGVDSYDAKLPWLATVRGRLGYSVGSTLFYGTGGYAVGSV 357
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPHHI 210
S ++ F S G G++ + + Y Y+
Sbjct: 358 KTSIATPAFTET-------FTKTKSGWTAGAGIETPFTLFNLFGPNWTSKTEYLYVDLG- 409
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SVNN+ A V H+ GIN HF
Sbjct: 410 -SVNNTFASGLVTSSKVTE--HVFRTGINYHF 438
Score = 91.4 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 33/210 (15%)
Query: 50 EYGIWSGNYVGLH----ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF--- 102
W+G Y+G++ + R TH + TY G ++G+N Q F
Sbjct: 35 AVYDWTGFYIGVNAGVGLGRDLATHNITPAAFATTYLQPQGALGGGQVGYNWQTNSFLGP 94
Query: 103 -VFGINCHTTAAK--DDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
V G+ DD T +K +G + G + +L Y GGF
Sbjct: 95 LVLGLEADIQGTGMSDDRTNLFGNVAAYSQKLDWFGTARGRIGLAKGPVLSYFTGGFAYG 154
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS-- 212
V + E + SD+ + + +G G++ + + + Y Y+
Sbjct: 155 NVKTTVTEGLASDSINRTQ-------TGWTIGSGVEAALGGNWTGKIEYLYVNLGNKDDV 207
Query: 213 --VNNSNAKSDVERVDRKGNAHIASLGINM 240
+ ++++ +I +G+N
Sbjct: 208 LFLGTQPIRTEIRE-------NIFRVGLNY 230
>gi|39935901|ref|NP_948177.1| hypothetical protein RPA2834 [Rhodopseudomonas palustris CGA009]
gi|39649755|emb|CAE28276.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 566
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 35/222 (15%)
Query: 54 WSGNYVGLHISRLYET----HPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGIN 107
W+G Y+G H+ + T +P +I T + G++ G+N Q +V G+
Sbjct: 38 WTGFYLGGHLGAGFGTAKVDNPFGPSIYGDTVRAPKALA-GLQAGYNWQAHGSPWVLGVE 96
Query: 108 CHTTAAKDDSTFYRLKEKYFIY-----------GDVVLKAGYSVD---SLLIYGMGGFGG 153
+A D T L G + + G++ L+Y GG G
Sbjct: 97 VDASAIDADGTNTCLAYSGQFVSANCRVREHVVGTLTGRLGHAFGPDGRSLMYVKGG-GA 155
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + D D +G G+++ ++ ++ A Y Y +
Sbjct: 156 FLFGNFRMTTNAPDYLNQPSAELDTTRWGWTVGAGIEHALSSRWAVRAEYDYANFGHRGI 215
Query: 214 NNSNA-------------KSDVERVDRKGNAHIASLGINMHF 242
+ + + H+ LG+N +F
Sbjct: 216 DGPGGGFLQTPFNPRTLVDTAGAPTQVHQDMHLIKLGLNYYF 257
>gi|254702337|ref|ZP_05164165.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704867|ref|ZP_05166695.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|254708278|ref|ZP_05170106.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|254710652|ref|ZP_05172463.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|254714835|ref|ZP_05176646.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|254717892|ref|ZP_05179703.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|256032146|ref|ZP_05445760.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256061667|ref|ZP_05451806.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|256160342|ref|ZP_05458035.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|256255546|ref|ZP_05461082.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
Length = 253
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 101/266 (37%), Gaps = 51/266 (19%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR----- 65
+ ++++ + ++A D+ + + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAPVAVDT-----------FSWTGGYIGINAGYAGGKF 53
Query: 66 --LYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------- 113
+ + + +G G++ G+N QL + V G +
Sbjct: 54 KHPFSGIEQDGAQDFSGSLDVTASGFVGGVQAGYNWQLANGLVLGGEADFQGSTVKSKLV 113
Query: 114 --------------KDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI- 157
D +F L+ K +G V + G++ + L++YG GG V
Sbjct: 114 DNGDLSDIGVAGNLSGDESFG-LETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKT 172
Query: 158 -DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N
Sbjct: 173 SLSAYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYI 227
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ ++ K N H LG+N F
Sbjct: 228 DEENVNINMENKVNFHTVRLGLNYKF 253
>gi|148258469|ref|YP_001243054.1| hypothetical protein BBta_7274 [Bradyrhizobium sp. BTAi1]
gi|146410642|gb|ABQ39148.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 693
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 66/222 (29%), Gaps = 34/222 (15%)
Query: 52 GIWSGNYVGLHISRLYETHPLA---------------DTINRKT-YNSLLPNGLGIELGH 95
W+G YVG H + D + + G++ G+
Sbjct: 46 FDWTGFYVGTHFGYAAGASNWSATQADGSAPRLMGRLDFYPQYDAFKGTGSFSSGLQAGY 105
Query: 96 NIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIY----------GDVVLKAGYSVDSLL 144
N Q + G+ + S G V + GY+ D+ L
Sbjct: 106 NYQAASRLLLGVEADISFPNSVSATQTFSTTLGDQASYGETVLHAGSVRGRVGYAFDNWL 165
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKG----RFDGHGSSVVLGIGLDYMVNYDISLS 200
+YG GGFG ++ + + + S +A + V G G++ V +
Sbjct: 166 VYGTGGFGWSFDQFTRTQLMGSPMGGSAVPGTLEKHSLWRLGWVAGAGVELPVAPSWTAK 225
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y S++ E +H LG+N
Sbjct: 226 LEYLLSEFGGQSISFPAGAQKFEG---DYASHSIRLGLNYQL 264
>gi|294853764|ref|ZP_06794436.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294819419|gb|EFG36419.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|326553873|gb|ADZ88512.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 223
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 4 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAG 63
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 64 GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 123
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 124 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 180
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 181 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 223
>gi|254561199|ref|YP_003068294.1| outer membrane porin [Methylobacterium extorquens DM4]
gi|254268477|emb|CAX24434.1| Putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens DM4]
Length = 703
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 70/229 (30%), Gaps = 43/229 (18%)
Query: 49 DEYGIWSGNYVGLHI--SRLYETHPLADTINRKTYNSLLPNGL----------------G 90
+ WSG Y G+ + + T + G G
Sbjct: 41 PRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDATTAVGG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAA----------------KDDSTFYRLKEKYFIYGDVVL 134
G N Q FV+G+ A D F ++EK ++G
Sbjct: 101 AFAGWNWQDGAFVYGVEADLVGANLKRGARSDATGFGYEGIDPPFALIREKTEVFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYV-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ + LIY G GA + ++ + + A LG G+ + V
Sbjct: 161 RLGYAFGNNLIYATAGLTGANGRVLATYPDLAGGPTVTATRNVSY--LGFTLGAGVQFAV 218
Query: 194 NYDISLSASYRYIP------HHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +SL YRY + ++ + R N +A L
Sbjct: 219 DPHLSLGIDYRYSDLGESGRFGLGTLPGPDGGPVTTRTSFVSNKMMARL 267
>gi|17989189|ref|NP_541822.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|17985044|gb|AAL54086.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 219
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 26/218 (11%)
Query: 44 VEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPNGL--GIELG 94
+ W+G Y+G++ + + D + G G++ G
Sbjct: 9 PTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAG 68
Query: 95 HNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLL 144
+N QL++ V G A + + K +G V + GY + + L+
Sbjct: 69 YNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLM 128
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG GG V + D++ D + LG G +Y +N + +L + Y
Sbjct: 129 VYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYL 185
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y ++ + + ++ K N H +G+N F
Sbjct: 186 YTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 219
>gi|91977250|ref|YP_569909.1| hypothetical protein RPD_2780 [Rhodopseudomonas palustris BisB5]
gi|91683706|gb|ABE40008.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 570
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 35/252 (13%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET----HPLADTINRK 79
L+ L+ + W+G Y+G H+ + T +P +I
Sbjct: 8 LSAVLFASCGTAHAADIARPPAADPIAALNWTGFYLGAHLGAGFGTTKVDNPYGPSIYGD 67
Query: 80 TYNSLLPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTFYRLKEKYFI--------- 128
T + G++ G+N Q +V G+ +A D T L
Sbjct: 68 TVR-VPKALAGLQAGYNWQAPGTAWVLGVEADASALDADGTDTCLAYSGQFVSANCRVRE 126
Query: 129 --YGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
G + + G++ L+Y GG D ++ D
Sbjct: 127 HVLGTLTGRIGHAFGSQGRSLMYVKGG-AAFLTSDLTMTTNAVDYLNRPAAELKETRWGW 185
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA-------------KSDVERVDRKGN 230
+G G+++ ++ ++ A Y Y +++ N + + +
Sbjct: 186 TVGAGIEHALSSGWAVRAEYDYADFGTRGIDSPNGGFLQIPSNPNSLIDTLGAPTRARQD 245
Query: 231 AHIASLGINMHF 242
AH+ LG+N +F
Sbjct: 246 AHLIKLGLNYYF 257
>gi|12620644|gb|AAG60920.1|AF322013_39 ID525 [Bradyrhizobium japonicum]
Length = 781
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 72/234 (30%), Gaps = 26/234 (11%)
Query: 29 YLPRKIDLFNEADNNVEYQDDEY--GIWSGNYVGLHIS----RLYETHPLADTINRKTYN 82
Y ++D N ++ + W+G Y+G I R + P T Y
Sbjct: 548 YKSGELDTAQAKANGIDKEPPPVMPTNWAGVYLGGTIGAGKGRSHYADPF-PTPVSGDYA 606
Query: 83 SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK-------------EKYFIY 129
L G ++G N Q +V G+ A T +
Sbjct: 607 DLGGAMFGGQIGINYQTGSWVLGLEASGYWANVQGTNTCFGAFPSPQIAGFNCGSQIDAL 666
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGG-AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + + GY+ D L+Y GG + + N + +G G
Sbjct: 667 GALTGRVGYAFDRTLLYVKGGSAWDRQTNQFNTGGISGTILTNGNTNW-----GWTVGGG 721
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+Y + + S++ Y+Y V + V SLG+N
Sbjct: 722 LEYALLPNWSMALEYKYYDFGKSPVFTTAGLGSVPLSPNSTTVQTVSLGVNYKL 775
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 29/237 (12%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEY-GIWSGNYVGLHISRLYETHPL-------ADTINRK 79
LY P W+G YVG H+ + + AD NR
Sbjct: 29 LYGPAHAADLPVKTAPPITAAPSTLWNWTGIYVGAHLGGAFGSSDWQTATGLQADFSNRG 88
Query: 80 TYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDS---TFYRLKEKYFI------ 128
S GL G ++G N Q +V G+ +AA D R +Y +
Sbjct: 89 FPGSGNAEGLLGGGQIGVNYQFGTWVTGLEIAASAADVDGFAKCANRADNRYGVISFTCD 148
Query: 129 -----YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
G + + G + +LLIYG G A + + + R+
Sbjct: 149 NRVTSLGTIAGRLGQTWGNLLIYGKAGAAWATDESDARTSHYINKFNQSGTRW-----GW 203
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ G+GL+Y + ++S Y + N + ++ V + + G+N
Sbjct: 204 MGGLGLEYAFSPNLSAFVEYDHFDFGSKDSNYVDQFNNASTVGFRQRFDMIKAGVNY 260
>gi|115525004|ref|YP_781915.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
gi|115518951|gb|ABJ06935.1| putative outer-membrane immunogenic protein precursor
[Rhodopseudomonas palustris BisA53]
Length = 219
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 70/191 (36%), Gaps = 22/191 (11%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTT 111
WSG Y G+ + D + T + + G +G+N Q +VFGI
Sbjct: 41 WSGFYAGVFGGYGWSQDIKVDGLAIAT-DEINGGFGGGTVGYNWQAPGSQWVFGIEVDAA 99
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ T ++K +G V + GY+VD+ L Y GGF A + ES
Sbjct: 100 GSSLKYTTVGFEDKIDAFGSVTGRVGYAVDAALFYAKGGFAWADNKVTVPGFSESK---- 155
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +G GL+YM S+ Y Y + + N VD
Sbjct: 156 -------LHTGWTVGGGLEYMFAPAWSVKGEYMYADYGKETYGNI--------VDIGATV 200
Query: 232 HIASLGINMHF 242
H G+N HF
Sbjct: 201 HTVKAGVNYHF 211
>gi|46202723|ref|ZP_00052712.2| COG3659: Carbohydrate-selective porin [Magnetospirillum
magnetotacticum MS-1]
Length = 693
Score = 98.7 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 64/198 (32%), Gaps = 37/198 (18%)
Query: 49 DEYGIWSGNYVGLHIS-----------------RLYETHPLADTINRK--TYNSLLPNGL 89
+G W+G Y G S R D R N+ G
Sbjct: 26 PSFGTWAGGYTGWQGSAGDAFGDFGFGSGMIGRRSVPEFRTGDATGRNDAGRNATTALG- 84
Query: 90 GIELGHNIQLEDFVFGINCHTTAA----------------KDDSTFYRLKEKYFIYGDVV 133
G+ G+ Q+ FV+G+ A D F ++ K ++G
Sbjct: 85 GLFGGYAWQIGPFVYGVEADVDATNLKRPVSSTTPGFGFEGLDPAFPVIRAKADVFGTAR 144
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ + L+Y G GA V + + + R LG G++Y +
Sbjct: 145 ARVGYAFERYLVYASFGLAGAQVRFLT-NFPDPATTSAPALRRGRAFLGFSLGAGIEYAI 203
Query: 194 NYDISLSASYRYIPHHIH 211
++L YRY+
Sbjct: 204 TEHLALGLEYRYLDLGRS 221
>gi|240138602|ref|YP_002963074.1| putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens AM1]
gi|240008571|gb|ACS39797.1| Putative outer membrane porin (OMPA-like) [Methylobacterium
extorquens AM1]
Length = 703
Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 61/198 (30%), Gaps = 37/198 (18%)
Query: 49 DEYGIWSGNYVGLHIS-----------------RLYETHPLADTINRKTYNSLLPNGLG- 90
+ WSG Y G+ S R + D + +G
Sbjct: 41 PRFIDWSGFYAGVQGSAGASFGNYDLGPTTIGPRRVRSISTGDATGSRDLGGDATTAVGG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAA----------------KDDSTFYRLKEKYFIYGDVVL 134
G N Q V+GI A D F ++EK ++G
Sbjct: 101 AFAGWNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYV-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ + LIY G GA + ++ + + A LG G+ + V
Sbjct: 161 RLGYAFGNNLIYATAGLTGANGRVLATYPDLAGGPTVTATRNVSY--LGFTLGAGVQFAV 218
Query: 194 NYDISLSASYRYIPHHIH 211
+ +SL YRY
Sbjct: 219 DPHLSLGIDYRYSDLGES 236
>gi|83308753|emb|CAJ01663.1| putative outer-membrane immunogenic protein precursor [Methylocapsa
acidiphila]
Length = 282
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 60/196 (30%), Gaps = 34/196 (17%)
Query: 52 GIWSGNYVGLHISRLYET--------------HPLADTINRKTYNSLLPNGLGIELGHNI 97
W+G Y+G I + PL + + G +G+N+
Sbjct: 39 FTWTGVYIGGQIGYAWTNPNVTYGDAGYTVGGFPLGYADSYNVGGNANGVIGGAHVGYNL 98
Query: 98 QLEDFVFGINCHTTAAKDDSTFY--------------RLKEKYFIYGDVVLKAGYSVDSL 143
QL +V G+ + T I G + + G + D
Sbjct: 99 QLGQWVLGLEGDVDGSSISKTVSVSPYSSYYADYIPTTFHSNLGIQGSIRGRVGIAWDRA 158
Query: 144 LIYGMGGFG------GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
L+Y GG ++ + + S+ + F +G GL+Y + +
Sbjct: 159 LLYATGGVAFGGFTSYVSTSYANPQGILSNFPFSGNDSFSQTRVGWTVGGGLEYAITNNW 218
Query: 198 SLSASYRYIPHHIHSV 213
S+ YRY S
Sbjct: 219 SVRGEYRYTDFGHTSN 234
>gi|296447763|ref|ZP_06889678.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
gi|296254740|gb|EFH01852.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
Length = 723
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 69/243 (28%), Gaps = 28/243 (11%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL-- 85
L+ L A E W+G ++G+ +
Sbjct: 5 LFATLPPLLAASAGACAEPAPPPIFSWAGLHLGVDAGVGLPVASGGRVEAAAGLSPTAHA 64
Query: 86 ---------PNGLGIELGHNIQLEDFVFGINCHT----------------TAAKDDSTFY 120
G +G++ Q +V+G+ A +
Sbjct: 65 LIAPGRDRAGVSFGARIGYDWQKGPWVYGLESELNFLDLRRGDDGVFAGFGALGAATRRL 124
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK-GRFDGH 179
+E V + GY+ L+Y G +SL V + D
Sbjct: 125 TTQENGQYVASVRGRLGYAFGRTLVYAAAGVAAGGWRGASLLTVTPGVAGPFFAPVSDSS 184
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
V+G G++ + S Y Y+ + + + S V ++ AH+ LG++
Sbjct: 185 RMKFVIGAGVEQALFDRWSARLEYTYVNQQLQIRHFDDYSSSAFDVRQRSEAHLLRLGLD 244
Query: 240 MHF 242
F
Sbjct: 245 YRF 247
>gi|229620416|gb|ACQ84164.1| Omp31 [Brucella melitensis]
Length = 240
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 82/227 (36%), Gaps = 26/227 (11%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPN 87
D+ + + W+G Y+G++ + + D +
Sbjct: 21 DVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAG 80
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKA 136
G G++ G+N QL++ V G A + + K +G V +
Sbjct: 81 GFVGGVQAGYNWQLDNGVVLGAGTDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARL 140
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + + L++YG GG V + D++ D + LG G +Y +N
Sbjct: 141 GYTATERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINN 197
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L + Y Y ++ + + ++ K N H +G+N F
Sbjct: 198 NWTLKSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 240
>gi|218530244|ref|YP_002421060.1| carbohydrate-selective porin OprB [Methylobacterium
chloromethanicum CM4]
gi|218522547|gb|ACK83132.1| Carbohydrate-selective porin OprB [Methylobacterium
chloromethanicum CM4]
Length = 703
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 60/198 (30%), Gaps = 37/198 (18%)
Query: 49 DEYGIWSGNYVGLHI--SRLYETHPLADTINRKTYNSLLPNGL----------------G 90
+ WSG Y G+ + + T + G G
Sbjct: 41 PRFIDWSGFYAGVQGSAGASFGNYDFGPTTIGSRRVRSISTGDATGSRDLGGDATTAVGG 100
Query: 91 IELGHNIQLEDFVFGINCHTTAA----------------KDDSTFYRLKEKYFIYGDVVL 134
G N Q V+GI A D F ++EK ++G
Sbjct: 101 AFAGWNWQDGALVYGIEADLVGANLKRGARSDAMGFGYEGIDPPFALIREKTDVFGAARA 160
Query: 135 KAGYSVDSLLIYGMGGFGGAYV-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ GY+ + LIY G GA + ++ + + A LG G+ + V
Sbjct: 161 RLGYAFGNNLIYATAGLTGANGRVLATYPDLAGGPTATATRNVSY--LGFTLGAGVQFAV 218
Query: 194 NYDISLSASYRYIPHHIH 211
+ +SL YRY
Sbjct: 219 DPHLSLGIDYRYSDLGES 236
>gi|289467881|gb|ADC95625.1| 31kDa outer membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. M5]
Length = 219
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 26/218 (11%)
Query: 44 VEYQDDEYGIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPNGL--GIELG 94
+ W+G Y+G++ + + D + G G++ G
Sbjct: 9 PTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAG 68
Query: 95 HNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLL 144
+N QL++ V G A + + K +G V + GY + + L+
Sbjct: 69 YNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLM 128
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG GG V + D++ D + LG G +Y +N + +L + Y
Sbjct: 129 VYGTGGLAYGKVKSA---FNLGDDAGALHTWSDKTKAGWTLGAGAEYAINNNWTLKSEYL 185
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y ++ + + ++ K N H +G+N F
Sbjct: 186 YTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 219
>gi|306843011|ref|ZP_07475638.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306844622|ref|ZP_07477209.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275066|gb|EFM56829.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306286803|gb|EFM58344.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 253
Score = 98.3 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 103/266 (38%), Gaps = 51/266 (19%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE-- 68
+ ++++ + ++A D+ + + + W+G Y+G++
Sbjct: 5 LLASVAMLFTSSAMAADIIVAEPAPVAVDT-----------FSWTGGYIGINAGYAGGKF 53
Query: 69 --THPLADTINRKTYNS---LLPNGL--GIELGHNIQLED-FVFGINCHTTAA------- 113
+ + ++ + +G G++ G+N QL + V G +
Sbjct: 54 KHPFSGVEQDGGEDFSGSLDVTGSGFVGGVQAGYNWQLANGIVLGGEADFQGSTVKSKLV 113
Query: 114 --------------KDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI- 157
D +F L+ K +G V + G++ + L++YG GG V
Sbjct: 114 DKGDLSDIGVAGNLDGDESFG-LETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKT 172
Query: 158 -DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N
Sbjct: 173 SLSAYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYI 227
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ ++ K N H +G+N F
Sbjct: 228 DEENVNVNMENKVNFHTVRIGLNYKF 253
>gi|316934003|ref|YP_004108985.1| porin [Rhodopseudomonas palustris DX-1]
gi|315601717|gb|ADU44252.1| porin [Rhodopseudomonas palustris DX-1]
Length = 578
Score = 98.0 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 83/263 (31%), Gaps = 47/263 (17%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET--- 69
V + + A DL PR + W+G Y+G H+ + T
Sbjct: 20 VSAVLAASCGAHAADL--PRP----------PAAKAVAVWNWTGFYLGAHLGAGFGTAKV 67
Query: 70 -HPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTTAAKDDSTFYRLKEKY 126
+P +I T + G++ G+ Q +V G+ +A D T L
Sbjct: 68 DNPFGASIYGDTVRAPKALA-GLQAGYTWQAPGSAWVLGVEVDASAIDADGTDTCLAYSG 126
Query: 127 FI-----------YGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
G + + G++ L+Y GG G + + ++ SD
Sbjct: 127 QFVSANCRIREHVLGTLTGRLGHAFGAQGRSLLYVKGG-GAFLIGNLTMTTNASDYLAQP 185
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA-------------K 219
+ +G G+++ + S+ A Y Y ++
Sbjct: 186 GAELNATRWGWTVGAGIEHALTPRWSVRAEYDYANFGRRGMDTPGGGFLQTPFNPNTLID 245
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ + + H+ LG+N F
Sbjct: 246 TPGAPTQVRQDMHLIKLGLNYQF 268
>gi|328542837|ref|YP_004302946.1| OmpA-like transmembrane domain [polymorphum gilvum SL003B-26A1]
gi|326412583|gb|ADZ69646.1| OmpA-like transmembrane domain, putative [Polymorphum gilvum
SL003B-26A1]
Length = 223
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 79/227 (34%), Gaps = 31/227 (13%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN 82
+ A DL P + +++ ++ WSG Y G ++ + + + +
Sbjct: 21 AFAADLPQPAQPVIYDNQVSS------ARFDWSGFYFGGNLGWGWGQFTTNSALTGRFNS 74
Query: 83 SLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDD----STFYRLKEKYFIYGDVVLKAG 137
G+ G+N + + G+ + + +K + + G
Sbjct: 75 DASGVNGGVHAGYNHAITPNIIAGLEADFQLSDLEKRRSVAGVGVKTSSDWNSTIRGRLG 134
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
Y+ D +IYG GG A + ++ ++ LG G++ V ++
Sbjct: 135 YAFDRFMIYGTGGLAIADLEVAAAGSKGNET-----------AIGWTLGAGIEGAVTDNV 183
Query: 198 SLSASYRYIPHHIH--SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ Y Y ++ + ++D+ +A IA G++ F
Sbjct: 184 TARLEYLYQDFGRESFTLGGTRYRTDL-------DASIARFGVSYKF 223
>gi|260466903|ref|ZP_05813086.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259029299|gb|EEW30592.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 234
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 77/237 (32%), Gaps = 25/237 (10%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
L +++ + + AD N E WSG Y G+ L S
Sbjct: 5 LLATVFILGPVGMACAADIN-EVSPVAGYDWSGLYAGVDAGYAAGKSNLFIAGGGFGGGS 63
Query: 84 -----LLPNGL--GIELGHNIQL-EDFVFGINCHTTAAKDDSTF----------YRLKEK 125
L P+G GI +G N Q+ +FV G + D LK +
Sbjct: 64 DLNVPLDPDGFVGGIHIGTNYQMANNFVIGAEADIAYSNADGLTPVDTGGGGVTTLLKSE 123
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
G L+AGY+ D L Y G A +++ S D +
Sbjct: 124 LKWQGSARLRAGYAFDRTLPYITAGVAAAKYEVTAI----SAGPGGEIPFHDESHVGWTV 179
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G+++ A YRY ++ + V VD H +G++ F
Sbjct: 180 GAGIEHAFTDRWIARAEYRYSDFGSQDLSLAAGLPTVTSVDL--QTHDVRVGLSYKF 234
>gi|39933882|ref|NP_946158.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192289301|ref|YP_001989906.1| porin [Rhodopseudomonas palustris TIE-1]
gi|39647729|emb|CAE26249.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|192283050|gb|ACE99430.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 449
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 75/218 (34%), Gaps = 30/218 (13%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL--PNGL--GIELGHNIQ 98
N Y W+G Y+G + + T+ ++ P+G G ++G+N Q
Sbjct: 236 NGTYITPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQ 295
Query: 99 LEDFVFGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
++VFG+ + K +G + GYS+ S L YG G+
Sbjct: 296 ASNWVFGVEADFQGSTQKDQRASVLGPRAYYDAKLPWFGTARGRIGYSLGSTLFYGTAGY 355
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY------MVNYDISLSASYRY 205
+ + + + + K KG G G++ ++ + + Y Y
Sbjct: 356 AYGNIKSDIVSSIGNYSFKTTKG-------GWAAGAGIETPFQLFGLLGPNWTSKTEYLY 408
Query: 206 IP-HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V + + + HI GIN HF
Sbjct: 409 VDLGSTTDVFGGTGINTTKVTE-----HILRTGINYHF 441
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 31/209 (14%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL-----PNGLGIELGHNIQLEDFV- 103
W+G Y+G ++ + + G ++G+N QL F+
Sbjct: 36 AVYDWTGFYIGANVGVGLGRNLQTHAYPGGASLNTTYLQPQGVIGGGQIGYNWQLGSFLG 95
Query: 104 ---FGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+ + + +K +G V + G + Y GG+
Sbjct: 96 PMLLGLEADIQGSGASDGYTSLNGLATNYNQKLDWFGTVRGRVGLVRGPAVAYFTGGYAV 155
Query: 154 AYVIDSSLEK--VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
V + E V DNSK S V+G G++ + + + Y Y+
Sbjct: 156 GSVKTTVTEGGLVAFDNSKT--------RSGWVIGSGVEAALGGNWTGKIEYLYLDLGNQ 207
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ N + + I G+N
Sbjct: 208 TDFFGNQS-----LRTEVRESIFRAGLNY 231
>gi|153011627|ref|YP_001372841.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151563515|gb|ABS17012.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 228
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 83/244 (34%), Gaps = 29/244 (11%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
+L ++++ + A D + + W+G Y+G I +
Sbjct: 5 SLLLASTVALIATTGAKAADAIVEEP---------APVIVAEPIFSWTGAYIGGQIGYGW 55
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTT--------AAKDDST 118
D R + L G+ G+N + + F+ G++ T +A D
Sbjct: 56 GKSEFEDAF-RVKPDGFLG---GLYAGYNFDVGNNFILGVDGDITYNNLKDNYSATDGDI 111
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
L+ K G V +AG + D + Y GG V ++ +D
Sbjct: 112 AGDLESKLRWSGAVRARAGVAFDRFMPYIAGGVAFGSVKNT---LSATDGVDEISVSQSK 168
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ G G+DY ++ L YRY + + +DV V+ K H LG+
Sbjct: 169 TYTGWTAGAGVDYAATDNLILRLEYRYTDYGKKDF---DFGTDVS-VEDKFKTHDVRLGV 224
Query: 239 NMHF 242
F
Sbjct: 225 AYKF 228
>gi|239831535|ref|ZP_04679864.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
gi|239823802|gb|EEQ95370.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
Length = 266
Score = 97.6 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 61/199 (30%), Gaps = 21/199 (10%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+Y W+G Y GL++ + G G N Q + FV
Sbjct: 89 PVEMAPQYS-WAGGYTGLYLGYGWNKVKTNTD----GSIKPDDMKAGAYAGWNFQQDQFV 143
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+G+ + + L+ K G + + GY ++ ++ Y G G V
Sbjct: 144 YGVEGDAGYSWAKKSKNGLEVKEGFEGSLRGRLGYDLNPVMPYITAGVAGKQVKLD---- 199
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
N G GL+ + +I YRY + + E
Sbjct: 200 -------NGFDDESKFRVGWTAGAGLEAKLTDNILGRVEYRYTQFGNKTYDLGT-----E 247
Query: 224 RVDRKGNAHIASLGINMHF 242
V K + H +G+ F
Sbjct: 248 SVRNKLDTHDIRVGVGYKF 266
>gi|92115870|ref|YP_575599.1| putative outer membrane protein [Nitrobacter hamburgensis X14]
gi|91798764|gb|ABE61139.1| putative outer membrane protein [Nitrobacter hamburgensis X14]
Length = 452
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 72/223 (32%), Gaps = 34/223 (15%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADT---INRKTYNSLLPNGL--GIELGHNI 97
N Y W+G Y+G ++ T +L P+G G++ G+N
Sbjct: 233 NSTYAPVATANWNGFYLGGNVGSGTGRDRTTVTNLATGESAAFNLAPDGFIGGVQAGYNW 292
Query: 98 QLEDFVFGINCHTTAAKDDS----------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
Q + V+G+ + + K G V + GY+V L Y
Sbjct: 293 QAGNIVYGLETDFQGSTMEDNKTCIGCEPGASLNFNAKLQWLGTVRGRLGYAVGPSLFYA 352
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSA 201
GGF V + E F + +G G++ + + +
Sbjct: 353 TGGFAYGNVKTAINE-----------VNFSDTRTGWTVGGGIETPFTLFGLFGPNWTSTT 401
Query: 202 SYRYIPHHIHSVNNSNAKSDVE--RVDRKGNAHIASLGINMHF 242
Y Y+ + + A + E + HI G+N HF
Sbjct: 402 EYLYVDLGKSTNGFTLANTTGEPGALQTGVQEHIFRTGLNYHF 444
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 23/204 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI----ELGHNIQLEDF--- 102
W+G Y+G++ + T NS LG ++G+N Q F
Sbjct: 35 PVYDWTGFYLGVNAGLGLGRDRTVNDFGDGTGNSTYLQPLGAIGGGQIGYNWQTNSFLGP 94
Query: 103 -VFGINCHTTAAK-----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
V G+ A + + +K +G + G L Y GG+ V
Sbjct: 95 LVLGVEADIQGADMTDNRTNINGVQYNQKLDWFGTARGRIGLVNGPTLTYLTGGYAYGNV 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ F G+ S G G++ + + + Y Y+
Sbjct: 155 STRGVADGV-------PFAFSGNRSGWTWGSGVEAALGGNWTGKIEYLYVDLGNR---TD 204
Query: 217 NAKSDVERVDRKGNAHIASLGINM 240
+ + + +I G+N
Sbjct: 205 VFDGGAQALHSELRENIFRAGLNY 228
>gi|182679250|ref|YP_001833396.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635133|gb|ACB95907.1| porin [Beijerinckia indica subsp. indica ATCC 9039]
Length = 250
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 74/209 (35%), Gaps = 29/209 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLAD----TINRKTYNSLLPNGL--GIELGHNIQ------- 98
W+G YVG I + R + S P+G+ G +G+N Q
Sbjct: 40 FTWTGVYVGGDIGYAWGNTSYNSQIFSAPARFAFGSYSPDGVTGGAHVGYNFQAGPSFIG 99
Query: 99 LEDFVFGINCHTTAAKDDSTFY-----RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+FV GI + + K I G + + G + D LIY GG
Sbjct: 100 TGNFVIGIEGDVQGSNYSKSVVGFANDIYTSKLDITGSIRGRLGIAFDRALIYATGG--A 157
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A+ ++ ++ + A D +G G++Y V + S+ A Y Y + +
Sbjct: 158 AFGGITNQLQLRNG----AFFSNDRTAVGWTVGGGIEYAVTNNWSVRAQYLYSDYGHTNS 213
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
NA+ K ++G + F
Sbjct: 214 FFPNAQVHKHDTQNK-----VTVGFSYKF 237
>gi|209885046|ref|YP_002288903.1| hypothetical protein OCAR_5916 [Oligotropha carboxidovorans OM5]
gi|209873242|gb|ACI93038.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 574
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 84/270 (31%), Gaps = 39/270 (14%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
G G +F + +LA R EA W+G Y+G H+
Sbjct: 2 GRGVVFKTKTALACLAVSALAFTNVEAR------EARVVPVSASPVLWNWTGFYLGAHLG 55
Query: 65 RLYETHPLADTINRKTYNSL--LPNGL-GIELGHNIQL--EDFVFGINCHTTAAKDDSTF 119
+ T + + Y LP G G++ G+N Q +VFG+ +A D T
Sbjct: 56 AGFGTSKVDNPYGPSIYGDTIRLPGGFAGLQGGYNWQGAGSPWVFGVEADVSAVNADGTN 115
Query: 120 YRLKEKYFI-----------YGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVE 165
L G + + G ++ L Y GG S
Sbjct: 116 TCLAYSGQFVSANCRARQQAMGSITGRIGRTISPDGRTLAYIKGGTAFMSGDLSLTTNAP 175
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV------------ 213
+ + R D +LG GL++ + S+ A Y Y V
Sbjct: 176 DYILQPSSERRD-TRWGWMLGAGLEHAITGAWSVKAEYAYANFGHRDVMAPGGGFLMTPF 234
Query: 214 -NNSNAKSDVERVDRKGNAHIASLGINMHF 242
S + ++H+ LG+N H
Sbjct: 235 DPGSLVNTTGLPTRASLDSHLVRLGLNYHL 264
>gi|225627449|ref|ZP_03785486.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|260563986|ref|ZP_05834472.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M]
gi|260566481|ref|ZP_05836951.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40]
gi|261758166|ref|ZP_06001875.1| outer membrane protein 25b [Brucella sp. F5/99]
gi|265999479|ref|ZP_05466559.2| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9]
gi|294852320|ref|ZP_06792993.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|225617454|gb|EEH14499.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|260154002|gb|EEW89094.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. 16M]
gi|260155999|gb|EEW91079.1| outer membrane protein 25b [Brucella suis bv. 4 str. 40]
gi|261738150|gb|EEY26146.1| outer membrane protein 25b [Brucella sp. F5/99]
gi|263094215|gb|EEZ18092.1| outer membrane protein 25b [Brucella melitensis bv. 2 str. 63/9]
gi|294820909|gb|EFG37908.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 243
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 24/208 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 45 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 101
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 102 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 161
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 162 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 216
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VE K H LG+ F
Sbjct: 217 VVDGDLSVE-ARNKFKTHDIRLGVAYKF 243
>gi|319782584|ref|YP_004142060.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317168472|gb|ADV12010.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 242
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/230 (19%), Positives = 68/230 (29%), Gaps = 25/230 (10%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-----SLLP 86
+ AD Y WSG Y G+ I L + P
Sbjct: 19 APAGMACAADIAETSPTSAY-DWSGLYAGVDIGYAAGKSNLFIAGGGLGGATDLNVGVDP 77
Query: 87 NGL--GIELGHNIQLED-FVFGINCHTTAAKDDSTFYR-----------LKEKYFIYGDV 132
NG G+ +G N Q+E+ FV G D LK + G
Sbjct: 78 NGFIGGVHIGANYQMENSFVIGAEADIAYGNIDGLTALDAGGGGGVTTLLKSELKWSGSA 137
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
L+AGY+ D L Y G A + V + +G G+++
Sbjct: 138 RLRAGYAFDRTLPYITAGVAAAKYELIA---VSAGGPAAEVTLHSDSHVGWTVGAGIEHA 194
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A YRY ++ + VD + +G++ F
Sbjct: 195 FTDRWIARAEYRYSDFGSQDLSVAAGLPTETHVDLQTQD--IRVGLSYKF 242
>gi|222082486|ref|YP_002541851.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221727165|gb|ACM30254.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 230
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 79/236 (33%), Gaps = 27/236 (11%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEY-----QDDEYGIWSGNYVGLHISRL------YETHP 71
A L+ AD +V + W+G YVGL+ + H
Sbjct: 6 GSAAFLFAFGMASAAYTADLSVSTPPAAPMEQPVFTWTGFYVGLNGGGAFGGDDKFGLHS 65
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST----FYRLKEKY 126
+ + G ++G+N Q++ +V G+ A + K
Sbjct: 66 GDTFLGKFGKIEGSGFFGGGQIGYNYQVDPNWVIGLEADFQGANIHDSVTNDGAHGSSKI 125
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+G + + GY+ D+ L YG GG ++ S+ D + VLG
Sbjct: 126 NWFGTLRPRVGYAYDNTLFYGTGGLAYGHIDYKGSLDGVGSFSE------DKTKAGWVLG 179
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+++ +++ Y+Y+ + S + H +G+N F
Sbjct: 180 AGVEHAFTDNVTAKLEYQYVDFGSFTAGGDALSS-----KATADFHSIRVGVNYKF 230
>gi|27379782|ref|NP_771311.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352935|dbj|BAC49936.1| bll4671 [Bradyrhizobium japonicum USDA 110]
Length = 282
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 85/248 (34%), Gaps = 29/248 (11%)
Query: 11 FVVFLSIVVPNH-SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
V+ +++ + A D+ P + A W+G Y+G H +
Sbjct: 48 LVLTAALLSLATPAFAADIIAPAPVKAPVPA---------AIFTWTGFYIGAHGGGAWSK 98
Query: 70 HP-LADTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAAKDD---------S 117
+ T + S+ +G + N Q+ + V G+ +
Sbjct: 99 WTGIDPTDPTAVWTSVTASGGIVGGQIGGNYQIGNVVVGLEGTGAWSSVTLNAGGPFGGG 158
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ L K V + G + D +L+Y GG ++ + + +A G F
Sbjct: 159 AGFTLSLKNDYIATVAGRFGVAFDRVLLYAKGGAAFTRDKYNANNGLAGALAGSASGSF- 217
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHH---IHSVNNSNAKSDVERVDRKGNAHIA 234
+ + + G G+++M + S+ A Y Y+ V + N + V
Sbjct: 218 -NRTGWLAGGGVEWMFMPNWSVRAEYNYMGFAAITEQPVTSGNLAATPANVKLNIQTGT- 275
Query: 235 SLGINMHF 242
+G+N HF
Sbjct: 276 -VGVNYHF 282
>gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
Length = 228
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 69/208 (33%), Gaps = 26/208 (12%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
D+ + IWSG Y G + R S G G N+Q
Sbjct: 41 DSRIPESAPPVAIWSGPYAGTFVGYNVSRFDNL----RGASISGDGVAGGAYAGFNLQDG 96
Query: 101 DFVFGINCHTTAAKDDST------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
V+G+ A D+T L + ++G + + G VD L+YG GG A
Sbjct: 97 SLVYGVEGDVGGAGFDATRRNALGNLDLSGESNVFGSLRGRVGVDVDPFLVYGTGGLAIA 156
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
S +S+ S +G G++ V I YRY
Sbjct: 157 ETELSLGGVSDSEAS-----------VGYTIGAGVEAQVTDSIRTRLEYRYSDF-----G 200
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+S+ V + H G++++F
Sbjct: 201 SSDYDLGRTSVSSGFDEHSVRAGVSLNF 228
>gi|325293521|ref|YP_004279385.1| Outer membrane protein [Agrobacterium sp. H13-3]
gi|325061374|gb|ADY65065.1| Outer membrane protein [Agrobacterium sp. H13-3]
Length = 210
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 70/194 (36%), Gaps = 21/194 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINC 108
WSG Y+G+ + + +S LG G+N Q +FV GI
Sbjct: 37 PVFTWSGPYLGIQGGAGWANGDFS-AGGPVASDSFDGGILGAFAGYNYQFDNNFVLGIEG 95
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+D+ + + G V + GY+ D LIYG G+ ++ +E+
Sbjct: 96 DVDYNWNDNDYAGVNIGTDWQGSVRGRVGYAFDRALIYGTAGWT------ATRGFIETPG 149
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ F+ +G GLDY ++ YRY + D+ V+
Sbjct: 150 AGKDSTTFN----GYTVGAGLDYAFTDNVFGRIEYRYNDYGDK---------DIFGVNTD 196
Query: 229 GNAHIASLGINMHF 242
+ +G+ + F
Sbjct: 197 FDQSTVKVGLGVKF 210
>gi|27380621|ref|NP_772150.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353786|dbj|BAC50775.1| outer-membrane immunogenic protein precursor [Bradyrhizobium
japonicum USDA 110]
Length = 237
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 20/196 (10%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
W+G Y+G H+ + + + + G++ G + Q +V G+ +
Sbjct: 45 WTGFYIGGHVGGAFAGDSSFQSSDARFLG-------GVQGGFDYQFAPNWVVGVEAQYSW 97
Query: 113 AKDDSTFYR------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
++ + G V + GY+ L+Y GG+ V
Sbjct: 98 LPTNNNGVTFPLGTQVTSNTDQLGSVTGRIGYTWGPALVYAKGGYAWRNGGL----GVNV 153
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ +G GL+YM S A Y+Y + ++ +D+ V
Sbjct: 154 AGVPQGFTATGNNKDGYTVGAGLEYMFAPSWSAKAEYQYYNFGSTTF--TSGPADIVGVR 211
Query: 227 RKGNAHIASLGINMHF 242
+ + H +G+N F
Sbjct: 212 GREDEHTVKVGVNYRF 227
>gi|148258633|ref|YP_001243218.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|146410806|gb|ABQ39312.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1]
Length = 710
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 80/221 (36%), Gaps = 20/221 (9%)
Query: 32 RKIDLFNEADNNV-EYQDDEYGIWSGNYVGLHISRLYE--THPLADTINRKTYNSLLPNG 88
R++D+ +AD E + W+G YVG H + + P G
Sbjct: 69 RRLDVRTKADRPPSEAEMKRVYDWTGFYVGGHFGYGGGRLGDDSHPKPEQGVFLPHSPTG 128
Query: 89 L--GIELGHNIQLED-FVFGINCHTTAAKDDS----TFYRLKEKYFIYGDVVLKAGYSVD 141
L G ++G+N QL + V G+ + G + GY+ D
Sbjct: 129 LIGGFQVGYNRQLANHLVLGVEADASFTSPTDEPALAPSPFNSTVDYVGTARGRVGYAFD 188
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
+ Y GGF + +D S GR+ + G+G ++ V+ + +
Sbjct: 189 RWMPYVTGGFAWGHGHIEV-----NDGSGAQLGRY---QTGWTAGLGAEFAVSGNWTAKV 240
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y+ + + + D+ H+A +G+N HF
Sbjct: 241 EYDYVNLSAATYDL--GRFDLPNARLAPGLHLAKIGLNYHF 279
>gi|157310311|emb|CAN43867.1| outer membrane protein 25b [Brucella microti CCM 4915]
gi|157310313|emb|CAN43868.1| outer membrane protein 25b [Brucella microti]
Length = 245
Score = 95.6 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 24/208 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 47 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 103
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 104 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 163
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 164 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 218
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VE K H LG+ F
Sbjct: 219 VVDGDLSVE-ARNKFKTHDIRLGVAYKF 245
>gi|265994897|ref|ZP_06107454.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether]
gi|262766010|gb|EEZ11799.1| outer membrane protein 25b [Brucella melitensis bv. 3 str. Ether]
Length = 236
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 24/208 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 38 PTFTWNGAYLGGQIGYGWGHSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 94
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 95 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 154
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 155 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 209
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VE K H LG+ F
Sbjct: 210 VVDGDLSVE-ARNKFKTHDIRLGVAYKF 236
>gi|256113516|ref|ZP_05454350.1| porin [Brucella melitensis bv. 3 str. Ether]
Length = 240
Score = 95.3 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 24/208 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 42 PTFTWNGAYLGGQIGYGWGHSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 98
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 99 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 158
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 159 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 213
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VE K H LG+ F
Sbjct: 214 VVDGDLSVE-ARNKFKTHDIRLGVAYKF 240
>gi|17987290|ref|NP_539924.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501854|ref|NP_697981.1| outer membrane protein [Brucella suis 1330]
gi|163843239|ref|YP_001627643.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225852477|ref|YP_002732710.1| porin [Brucella melitensis ATCC 23457]
gi|254704272|ref|ZP_05166100.1| porin [Brucella suis bv. 3 str. 686]
gi|254706827|ref|ZP_05168655.1| porin [Brucella pinnipedialis M163/99/10]
gi|256061069|ref|ZP_05451225.1| porin [Brucella neotomae 5K33]
gi|256369396|ref|YP_003106904.1| outer membrane protein, putative [Brucella microti CCM 4915]
gi|260168691|ref|ZP_05755502.1| outer membrane protein, putative [Brucella sp. F5/99]
gi|261314294|ref|ZP_05953491.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10]
gi|261325071|ref|ZP_05964268.1| outer membrane protein 25b [Brucella neotomae 5K33]
gi|261754939|ref|ZP_05998648.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686]
gi|265991062|ref|ZP_06103619.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1]
gi|17982969|gb|AAL52188.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23347791|gb|AAN29896.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251214|gb|AAS84578.1| Omp25b [Brucella neotomae]
gi|163673962|gb|ABY38073.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|225640842|gb|ACO00756.1| porin [Brucella melitensis ATCC 23457]
gi|255999556|gb|ACU47955.1| outer membrane protein, putative [Brucella microti CCM 4915]
gi|261301051|gb|EEY04548.1| outer membrane protein 25b [Brucella neotomae 5K33]
gi|261303320|gb|EEY06817.1| outer membrane protein 25b [Brucella pinnipedialis M163/99/10]
gi|261744692|gb|EEY32618.1| outer membrane protein 25b [Brucella suis bv. 3 str. 686]
gi|263001846|gb|EEZ14421.1| outer membrane protein 25b [Brucella melitensis bv. 1 str. Rev.1]
gi|326408994|gb|ADZ66059.1| porin [Brucella melitensis M28]
Length = 236
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 24/208 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 38 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 94
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 95 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 154
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 155 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 209
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VE K H LG+ F
Sbjct: 210 VVDGDLSVE-ARNKFKTHDIRLGVAYKF 236
>gi|256044638|ref|ZP_05447542.1| porin [Brucella melitensis bv. 1 str. Rev.1]
gi|326538706|gb|ADZ86921.1| porin [Brucella melitensis M5-90]
Length = 240
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 77/208 (37%), Gaps = 24/208 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 42 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 98
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 99 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 158
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 159 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 213
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VE K H LG+ F
Sbjct: 214 VVDGDLSVE-ARNKFKTHDIRLGVAYKF 240
>gi|302319025|gb|ADL14702.1| outer membrane protein 31 [Brucella melitensis]
Length = 240
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 26/210 (12%)
Query: 52 GIWSGNYVGLHISR-------LYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED- 101
W+G Y+G++ + + D + G G++ G+N QL++
Sbjct: 38 FSWTGGYIGINAGYAGGKFKHPFSSFDKEDNEQVSGSLDVTAGGFVGGVQAGYNWQLDNG 97
Query: 102 FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFG 152
V G A + + K +G V + GY + + L++YG GG
Sbjct: 98 VVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLA 157
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
V + D++ D + LG G +Y N + +L + Y Y +
Sbjct: 158 YGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAFNNNWTLKSEYLYPYLGKRN 214
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + ++ K N H G+N F
Sbjct: 215 LVDVDNSF----LESKVNFHTDRFGLNYKF 240
>gi|294852064|ref|ZP_06792737.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
gi|294820653|gb|EFG37652.1| outer-membrane immunogenic protein [Brucella sp. NVSL 07-0026]
Length = 305
Score = 95.3 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 21/195 (10%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+Y W+G Y GL++ + + G G N Q + V+G+
Sbjct: 132 APQYS-WAGGYTGLYLGYGWNKAKTSTV----GSIKPDDWKAGAFAGWNFQQDQIVYGVE 186
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + L+ K G + + GY ++ ++ Y G G+ + +
Sbjct: 187 GDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-------- 238
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N G GL+ + +I YRY + N N V
Sbjct: 239 ---NGLDDESKFRVGWTAGAGLEAKLTDNILGRVEYRYTQY-----GNKNYDLAGTTVRN 290
Query: 228 KGNAHIASLGINMHF 242
K + +GI F
Sbjct: 291 KLDTQDIRVGIGYKF 305
>gi|300024536|ref|YP_003757147.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526357|gb|ADJ24826.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 232
Score = 94.9 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 29/213 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYN-------SLLPNGL--GIELGHNIQLEDFVF 104
W+G Y+G H+ + D + P G+ G+ G+N+QL + V
Sbjct: 25 WTGPYIGAHVGGAWGNASTTDDPRDWGNDPKFIGPFDQNPVGVIAGLTAGYNVQLSNIVL 84
Query: 105 GINCHTTAAKDDSTFYRLKE----------KYFIYGDVVLKAGY-SVDSLLIYGMGGFGG 153
G+ DS IYG V +AG+ + S L+YG GGF
Sbjct: 85 GVEGDIGYLGLDSALDTPSSQSGNHQSIVLDSGIYGAVTARAGFLATPSTLVYGKGGFA- 143
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
Y D++ + G F + V G G++ + ++S+ Y + +
Sbjct: 144 FYNGDATQSTTADGYVFHGTGTF----TGWVAGGGIEQRLTDNLSIKVEYLHFDFGSQAG 199
Query: 214 NNSNAKSD----VERVDRKGNAHIASLGINMHF 242
+ ++ V + +A G+N HF
Sbjct: 200 DQTSISDPPVGHVYGNSTRIDADTVKAGLNYHF 232
>gi|300024284|ref|YP_003756895.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526105|gb|ADJ24574.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 218
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 25/195 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
IW G Y+G++ + G ++G+N Q VFG+
Sbjct: 44 IWDGAYIGINGGYGWSD---------ARPTEPEGGFGGGQIGYNWQRGRVVFGLEGDFQG 94
Query: 113 AKDDSTFYRL-----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
A Y + + V + G++ L+Y GG A V ++
Sbjct: 95 ADISGRAYTFDGDTARSDMNWFSTVRGRLGFTSGPWLLYATGGLAVADVDHR------AN 148
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ D + +G GL++ + + S A Y Y+ + N D R++
Sbjct: 149 LEGQSFRGSD-TLTGYAVGGGLEWKFSQNWSAKAEYLYLGLGDSKLTADNG--DFVRINN 205
Query: 228 KGNAHIASLGINMHF 242
+ +G+N HF
Sbjct: 206 --DVQTVRVGLNYHF 218
>gi|297248070|ref|ZP_06931788.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
gi|297175239|gb|EFH34586.1| 25 kDa outer-membrane immunogenic protein [Brucella abortus bv. 5
str. B3196]
Length = 305
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 21/195 (10%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+Y W+G Y GL++ + + G G N Q + V+G+
Sbjct: 132 APQYS-WAGGYTGLYLGYGWNKAKTSTV----GSIKPDDWKAGAFAGWNFQQDQIVYGVE 186
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + L+ K G + + GY ++ ++ Y G G+ + +
Sbjct: 187 GDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-------- 238
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N G GL+ + +I YRY + N N V
Sbjct: 239 ---NGLDDESKFRVGWTAGAGLEAKLTDNILGRVEYRYTQY-----GNKNYDLAGTTVRN 290
Query: 228 KGNAHIASLGINMHF 242
K + +GI F
Sbjct: 291 KLDTQDIRVGIGYKF 305
>gi|189023912|ref|YP_001934680.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225627199|ref|ZP_03785237.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237815152|ref|ZP_04594150.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260566721|ref|ZP_05837191.1| outer membrane protein [Brucella suis bv. 4 str. 40]
gi|189019484|gb|ACD72206.1| OmpA-like transmembrane domain protein [Brucella abortus S19]
gi|225618034|gb|EEH15078.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789989|gb|EEP64199.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|260156239|gb|EEW91319.1| outer membrane protein [Brucella suis bv. 4 str. 40]
Length = 305
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 21/195 (10%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+Y W+G Y GL++ + + G G N Q + V+G+
Sbjct: 132 APQYS-WAGGYTGLYLGYGWNKAKTSTV----GSIKPDDWKAGAFAGWNFQQDQIVYGVE 186
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + L+ K G + + GY ++ ++ Y G G+ + +
Sbjct: 187 GDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-------- 238
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
N G GL+ + +I YRY + N N V
Sbjct: 239 ---NGLDDESKFRVGWTAGAGLEAKLTDNILGRVEYRYTQY-----GNKNYDLAGTTVRN 290
Query: 228 KGNAHIASLGINMHF 242
K + +GI F
Sbjct: 291 KLDTQDIRVGIGYKF 305
>gi|154246089|ref|YP_001417047.1| porin [Xanthobacter autotrophicus Py2]
gi|154160174|gb|ABS67390.1| porin [Xanthobacter autotrophicus Py2]
Length = 255
Score = 94.9 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 67/218 (30%), Gaps = 25/218 (11%)
Query: 50 EYGIWSGNYVGLHISRLYE------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
W+G Y+G + TH L +T +L +G +G+N Q+ + V
Sbjct: 38 PAFSWTGFYIGAQGGYAWADNSFSNTHDLYNTYANDASYTLDGGLVGGVIGYNYQINNIV 97
Query: 104 FGINCHTTAAKDD----------------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G+ A + K G + + G + D +L+Y
Sbjct: 98 LGVEADANWADISGSGSVLRAGELATNCIVSNNPCSSKIDALGTITARLGVAFDRVLLYA 157
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GG A V ++ + +G G+++ + S Y YI
Sbjct: 158 KGGAAWANVKHTAGSTDYEYPEFSYSASNSNTRWGWTVGAGVEWAFFNNWSAKVEYNYID 217
Query: 208 HHIHSVNNS---NAKSDVERVDRKGNAHIASLGINMHF 242
+ V + N ++ GIN F
Sbjct: 218 LGSNDVTFNFVPNTYMPAYTSTADTTVNLVKAGINYRF 255
>gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 221
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 19/226 (8%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
++ SLA DL P+ + + WSG Y+G + + + +
Sbjct: 14 LMAGTSLAADL--PQPVQPSQPEISYETPATFSAYDWSGAYIGANAGWGFLSADGKSGAS 71
Query: 78 RKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
+ G+ G+N + V G + ++ + V +A
Sbjct: 72 GALDDDQNGVTAGVHAGYNFMVAPSVVLGAEADIQYNDLEEKSAGVELQSDWNATVRARA 131
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY++D L+YG GG + +K++ G+ + V+G G+++ V
Sbjct: 132 GYALDRTLVYGTGGAAFKDL-----------TAKSSAGKDEKTAIGYVVGAGVEHAVTDT 180
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ Y Y + E+ N + G++M F
Sbjct: 181 LTARLEYLYQDFGDQKF---DFGGTTEKTKIDEN--LVRAGVSMKF 221
>gi|154246285|ref|YP_001417243.1| porin [Xanthobacter autotrophicus Py2]
gi|154160370|gb|ABS67586.1| porin [Xanthobacter autotrophicus Py2]
Length = 207
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 70/200 (35%), Gaps = 30/200 (15%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDF 102
Q W+G Y+G + + + +D G + G+N Q F
Sbjct: 37 PYVQPVAAFTWTGFYIGANAGYGWGSTVNSDPGGFIG---------GFQAGYNYQFASPF 87
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
V G+ + + Y L G V + G+S D +L+YG GGF L
Sbjct: 88 VLGVETDFNFSGLSAGGYSL----DYLGTVRARLGWSFDRVLVYGTGGFAYGQGSLDVLG 143
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S + +G G + + + S A Y Y+ + ++ + +
Sbjct: 144 LSSSSTQ-----------TGWTIGAGAEVAFDRNWSARAEYLYVD-----LGSATYPTVI 187
Query: 223 ERVDRKGNAHIASLGINMHF 242
VD NA+I G+N F
Sbjct: 188 GPVDSGINANILRAGVNYRF 207
>gi|3914820|sp|Q52866|ROPB_RHILV RecName: Full=22 kDa outer membrane protein; Flags: Precursor
gi|525267|emb|CAA56751.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 248]
Length = 211
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 73/210 (34%), Gaps = 24/210 (11%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE 92
++D EA E G W G Y+G + +
Sbjct: 26 RVDQVPEAPVAQEAPVKPAGSWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VF 77
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+N Q V+G+ + DD + ++ KY G V + GY ++ L+YG G
Sbjct: 78 TGYNWQQGQIVYGVESDLGYSGDDVSSGGVENKYGWNGSVRGRVGYDMNPFLLYGTAGLA 137
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
V KV D S +K F +G G++ V +I+ YRY +
Sbjct: 138 IGDV------KVSDDTSDESKTNF-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKD 186
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + R + + LGI + F
Sbjct: 187 YDLDSGS-----FSRGYDENSVKLGIGVKF 211
>gi|316932343|ref|YP_004107325.1| porin [Rhodopseudomonas palustris DX-1]
gi|315600057|gb|ADU42592.1| porin [Rhodopseudomonas palustris DX-1]
Length = 448
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 76/217 (35%), Gaps = 29/217 (13%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN-SLLPNGL--GIELGHNIQL 99
N Y W+G Y+G + + TI T +L P+G G ++G+N Q
Sbjct: 236 NGMYVAPPPANWAGLYIGGNFGGATARDRSSVTIAGVTDAFNLAPDGFFGGGQIGYNWQA 295
Query: 100 EDFVFGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
++VFG+ + K +G + GYS+ S L YG G+
Sbjct: 296 VNWVFGVEADFQGSTLKDQRAAVLGPAVFYDAKLPWFGTARGRIGYSLGSTLFYGTAGYA 355
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY------MVNYDISLSASYRYI 206
+ + + + + K KG G G++ ++ + + Y Y+
Sbjct: 356 YGNIKTDIVSAIGNYSFKTTKG-------GWAAGAGIETPFQLFGLLGPNWTSKTEYLYV 408
Query: 207 PHHIHSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
+ ++ ++ H GIN HF
Sbjct: 409 D-----LGSTTDAFGATGINTTKVTQHTLRTGINYHF 440
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 63/209 (30%), Gaps = 31/209 (14%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL-----PNGLGIELGHNIQLE---- 100
W+G Y+G ++ + + G ++G+N Q
Sbjct: 36 AVYDWTGFYIGANVGVGLGRDLQTHSYPGAGTLNSTYLQPQGAIGGGQIGYNWQFGSMFG 95
Query: 101 DFVFGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+ G+ + + +K +G V + G Y GG+
Sbjct: 96 PMLIGVEADIQGSGMSDGYTSLNGLATNYNQKLDWFGTVRGRVGLVRGPAFGYFTGGYAV 155
Query: 154 AYVIDSSLEK--VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
V + E V DNSK S V+G G++ + + S Y Y+
Sbjct: 156 GNVKTTVTEGGLVAFDNSKT--------RSGWVIGSGVEAALGGNWSGKIEYLYLDLGNQ 207
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ N + + I +G+N
Sbjct: 208 TDFFGNQS-----LRTEARESIFRVGLNY 231
>gi|159185080|ref|NP_355120.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140353|gb|AAK87905.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 22/194 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINC 108
WSG Y+G+ + + + LG G+N Q + V GI
Sbjct: 37 PVFTWSGPYLGIQGGAGWANGDFSAG-GPVVSDDFNGGILGAFAGYNYQFDNNMVLGIEG 95
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+D+ + +K G V + GY+ D LIY G+
Sbjct: 96 DVDYNWNDNDYSGIKVGTDWQGSVRGRVGYAFDHALIYATAGWT-----------ATRGF 144
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ G + +G G+DY ++ YRY + D+ ++
Sbjct: 145 IETPVGDDKATFNGYTVGAGVDYAFTDNVFGRLEYRYNDYGDK---------DIFGINTD 195
Query: 229 GNAHIASLGINMHF 242
+ H +G+ + F
Sbjct: 196 FDQHTVKVGLGVKF 209
>gi|90424285|ref|YP_532655.1| hypothetical protein RPC_2788 [Rhodopseudomonas palustris BisB18]
gi|90106299|gb|ABD88336.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 578
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 77/230 (33%), Gaps = 36/230 (15%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKT--------YNSLLPNGLGI--------- 91
W+G YVG + + +D+I T + + P GL +
Sbjct: 341 PLAVNWTGVYVGGQLGAGFGPKHWSDSIGSTTSLVNPGSDFPAGTPPGLNVGGFGKSTPM 400
Query: 92 -------ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK--------EKYFIYGDVVLKA 136
+LG+N Q V G+ A + G V +
Sbjct: 401 AGGLGGAQLGYNFQTGRTVLGVEADVAFADLKGSHTIYSGLGGGQAEAHTTALGSVTGRV 460
Query: 137 GYSVDSLLIYGMGGFGGA---YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY+V+ L+Y G A + +D+S + S +G GL+Y V
Sbjct: 461 GYAVERNLLYVKAGGAWAVTDHTLDTSSIFIPSQGEGCCHDNVRSTRLGWTVGAGLEYAV 520
Query: 194 NYDISLSASYRYIPHHIHSVN-NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S Y Y+ SV+ NA+ + VD H+ +G+N
Sbjct: 521 DRHWSAKLEYDYMDFGSQSVSFPVNARLGLPSVDIDQAFHVVKMGVNYKL 570
>gi|298292293|ref|YP_003694232.1| porin [Starkeya novella DSM 506]
gi|296928804|gb|ADH89613.1| porin [Starkeya novella DSM 506]
Length = 257
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/226 (16%), Positives = 64/226 (28%), Gaps = 39/226 (17%)
Query: 50 EYGIWSGNYVGLHISRLY------------ETHPLADTINRKTYNSLLPNGLGIELGHNI 97
W+G Y+G + + + D + G+++G+N
Sbjct: 38 PAFTWTGLYLGGNAGYGWGEGSAPWLGYLDYYYGALDQYGYSGGSDPQGWFGGVQVGYNY 97
Query: 98 QL-EDFVFGINCHTTAAKDDSTFYRL----------------KEKYFIYGDVVLKAGYSV 140
Q + V GI + + + K +G V + GY+V
Sbjct: 98 QFDNNVVLGIEADAQFGELKDSLSYYGTDLFSGVPDLDLGGIETKIEAFGTVRARLGYAV 157
Query: 141 DSLLIYGMGGFGGAYVIDS----SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
D LL Y GG V S + D +G G++Y +
Sbjct: 158 DRLLPYVTGGLAWGNVKMSERWDTYMGGVFQPGLTGTASADETLWGWTVGGGVEYAFTDN 217
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ A Y Y + + LGIN F
Sbjct: 218 WTVKAEYLYADLGDINWDGD------AGTKVDVKLQTVKLGINYKF 257
>gi|90419513|ref|ZP_01227423.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
gi|90336450|gb|EAS50191.1| OmpA-like transmembrane domain [Aurantimonas manganoxydans
SI85-9A1]
Length = 223
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 72/207 (34%), Gaps = 30/207 (14%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED 101
+WSG Y G + ++ T S +G G+ G+N Q +
Sbjct: 39 PIAPSTPVYVWSGAYAGAFVGYN------TSNFDQSTGASFDGDGFVGGVYTGYNWQADQ 92
Query: 102 FVFGINCHTTAAKDD------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
FVFG+ + D +T +L I+G + G +VD L++ GG A
Sbjct: 93 FVFGLEADLGGSDVDASGTNAATGAQLDADSNIFGSFRARVGVAVDPFLVFATGGLAAAR 152
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
S +S S LG G++ V+ D++ YRY + +
Sbjct: 153 NELSLNGFSDSQTS-----------IGYTLGAGVEARVSDDVTTRLEYRYSDFGSETYDL 201
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
N V + H GI + F
Sbjct: 202 GNTS-----VSSGFDEHSIRAGIALKF 223
>gi|86749064|ref|YP_485560.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572092|gb|ABD06649.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 254
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 87/262 (33%), Gaps = 36/262 (13%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
GYG VV + + +LA D+ + + A W+G YVG H+
Sbjct: 5 GYGFAVLVVACGL-GSSMALAADMAMKAPVKAVPYA---------PSPSWTGLYVGGHLG 54
Query: 65 RLYETHPLADTINRKTYNSLLPNGL-----------GIELGHNIQLEDFVFGINCHTTAA 113
+ A ++ + N + P G G++ G+N Q++++V GI +
Sbjct: 55 GGW-VDETATFVSSTSINLIDPLGTSYPIDHSGFLGGVQAGYNYQIQNWVIGIAGDFSWT 113
Query: 114 KDDSTFYRLK-----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
K Y + GY+ +LL YG GG + +
Sbjct: 114 SAKVDTVTASLLVPGAQVHTQAKTDWYATATGRVGYAFGNLLAYGKGGAAWIHSVHGGFA 173
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS-- 220
+ + +G+GL++ S+ Y Y+ + +N
Sbjct: 174 DFGAAGIV-PFSDVTTTRAGWTVGVGLEWAFAPHWSVFGEYNYMDFGTRTYTFTNLADGG 232
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D K + + G+N F
Sbjct: 233 STSNFDVKTSVSLVKAGVNYRF 254
>gi|153009914|ref|YP_001371129.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151561802|gb|ABS15300.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 213
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 63/199 (31%), Gaps = 21/199 (10%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+Y W+G Y GL++ + G G N Q + FV
Sbjct: 36 PVEMAPQYS-WAGGYTGLYLGYGWNKAKTDTV----GTVKPDDMKAGAYAGWNFQQDQFV 90
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+G+ + T L+ K G + + GY ++ ++ Y G G+ V
Sbjct: 91 YGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAGVAGSQVKLD---- 146
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
N G GL+ + +I YRY + + N E
Sbjct: 147 -------NGFDDESKFRVGWTAGAGLEAKLTDNILGRVEYRYTQFGNKTYDLGN-----E 194
Query: 224 RVDRKGNAHIASLGINMHF 242
V K + H +G+ F
Sbjct: 195 SVRNKLDTHDIRVGVGYKF 213
>gi|254701730|ref|ZP_05163558.1| porin [Brucella suis bv. 5 str. 513]
gi|261752281|ref|ZP_05995990.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513]
gi|261742034|gb|EEY29960.1| outer membrane protein 25b [Brucella suis bv. 5 str. 513]
Length = 236
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 76/208 (36%), Gaps = 24/208 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 38 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 94
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + ++D + Y GG V
Sbjct: 95 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMSVAMDRWMPYIAGGVAFGNV 154
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 155 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 209
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ VE K H LG+ F
Sbjct: 210 VVDGDLSVE-ARNKFKTHDIRLGVAYKF 236
>gi|110633591|ref|YP_673799.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
gi|110284575|gb|ABG62634.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
Length = 234
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 56/172 (32%), Gaps = 20/172 (11%)
Query: 52 GIWSGNYVGLHISRL-----YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
W+G Y+G YE P S G ++G++ Q+ ++V G
Sbjct: 40 FDWTGLYLGAFGGVSTGDFKYEAGPTGGDPLGGIDISGGGFIGGAQVGYDWQIGNWVIGG 99
Query: 107 NCHTTAAKDDSTFY---------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
A D+ + K G V +AGYS D L+YG GGF
Sbjct: 100 VADIAATNHDADISADIDGFGSAEAESKLKYLGTVRARAGYSFDRTLVYGHGGFAYGETE 159
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
D + G G+++ V IS+ Y Y+
Sbjct: 160 QKI------DLGGTELFNESQGRTGWTAGAGVEFAVTNRISVGTEYSYVDLG 205
>gi|39936434|ref|NP_948710.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39650289|emb|CAE28812.1| putative outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 240
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 78/233 (33%), Gaps = 24/233 (10%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
I + + A DL PR A E W+G YVG H+ +
Sbjct: 15 IALSAPAFAADL-PPRPYTKAAPAYTAPEV----VYNWTGFYVGGHVGGAWAGD------ 63
Query: 77 NRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRL------KEKYFIY 129
N T NS G G++ G + Q ++V GI + ++T E
Sbjct: 64 NNITGNSGRFFG-GVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGSTATEDTRGL 122
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ L+Y GG+ DS L + +G GL
Sbjct: 123 GSVTGRLGYAWGPTLVYAKGGYAW---RDSDLSVASLGGVPSGYTTSGSRNDGYTVGAGL 179
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YM S Y+Y + +DV + + H GIN F
Sbjct: 180 EYMFAPSWSAKVEYQYYKFGDTTFTG--GPADVVGTSFRNDEHTVKAGINYRF 230
>gi|241203970|ref|YP_002975066.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240857860|gb|ACS55527.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 211
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 67/193 (34%), Gaps = 24/193 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W G Y+G + + G+N Q V+G+
Sbjct: 43 PAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFTGYNWQQGQIVYGVESD 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ DD + +K KY G V + GY ++ L+YG G V KV D S
Sbjct: 95 LGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAIGDV------KVSDDTS 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+K F +G G++ V +I+ YRY + + + R
Sbjct: 149 DESKTNF-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYDLDSGS-----FSRGY 198
Query: 230 NAHIASLGINMHF 242
+ + LGI + F
Sbjct: 199 DENSVKLGIGVKF 211
>gi|116251355|ref|YP_767193.1| ropB outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115256003|emb|CAK07084.1| putative ropB outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|220979413|gb|ACL97988.1| outer membrane protein B [Rhizobium leguminosarum bv. viciae]
Length = 211
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 70/204 (34%), Gaps = 24/204 (11%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
EA E G W G Y+G + + G+N Q
Sbjct: 32 EAPVAQEAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFTGYNWQ 83
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
V+G+ + DD + +K KY G V + GY ++ L+YG G V
Sbjct: 84 QGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAIGDV-- 141
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
KV D S +K F +G G++ V +I+ YRY + + +
Sbjct: 142 ----KVSDDTSDESKTNF-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYDLDSG 192
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
R + + LGI + F
Sbjct: 193 S-----FSRGYDENSVKLGIGVKF 211
>gi|13471933|ref|NP_103500.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14022677|dbj|BAB49286.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 220
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 66/198 (33%), Gaps = 16/198 (8%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
W+G Y G+ + + + G ++G+N Q+ FV GI
Sbjct: 32 FSWTGFYGGVQAGGGWNDSRWSGATFDSFNTNGSGGIFGGQIGYNYQINQFVIGIEGDLA 91
Query: 112 AAKDD-------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + + K G V + GY++D +LIYG G V + +
Sbjct: 92 GSTVKGDGQCSTALGTTCETKQDYLGSVRGRLGYAIDRILIYGDAG-----VAFTKYKIA 146
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
E D + G G G+G +Y + + + Y S +
Sbjct: 147 EVDGFHQSFGG--GSRVGWTAGLGAEYALTDHWTAGVEWNYYDFGTKSGESDTIPGFF-- 202
Query: 225 VDRKGNAHIASLGINMHF 242
VD + ++ IN F
Sbjct: 203 VDNRNTENVVVGKINYKF 220
>gi|192292221|ref|YP_001992826.1| porin [Rhodopseudomonas palustris TIE-1]
gi|192285970|gb|ACF02351.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 240
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/233 (22%), Positives = 79/233 (33%), Gaps = 24/233 (10%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
I + + A DL PR A E W+G YVG H+ +
Sbjct: 15 IALSAPAFAADL-PPRPYTKAAPAYTAPEV----VYNWTGFYVGGHVGGAWAGD------ 63
Query: 77 NRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRL------KEKYFIY 129
N T NS G G++ G + Q ++V GI + ++T E
Sbjct: 64 NNITGNSGRFFG-GVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGSTATEDTRGL 122
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ L+Y GG+ S + A G + +G GL
Sbjct: 123 GSVTGRLGYAWGPTLVYAKGGYAWRDSDLSVASLGGVPSGYTASGSRN---DGYTVGAGL 179
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YM S Y+Y + +DV + + H GIN F
Sbjct: 180 EYMFAPSWSAKVEYQYYKFGDTTFTG--GPADVVGTSFRNDEHTVKAGINYRF 230
>gi|110634908|ref|YP_675116.1| hypothetical protein Meso_2567 [Mesorhizobium sp. BNC1]
gi|110285892|gb|ABG63951.1| outer membrane protein, hypothetical [Chelativorans sp. BNC1]
Length = 234
Score = 92.6 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 83/246 (33%), Gaps = 25/246 (10%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
++ + F+ + + A D + R + + WSG Y+G+ +
Sbjct: 3 SILSLAFIGLFGTSAGFAADAIIQRDDPVPVAPVVAAPAKS---YDWSGIYLGVDGGYKW 59
Query: 68 ETHPLADTIN------RKTYNSLLPNGLGIELGHNIQLEDFVFGINCH-----TTAAKDD 116
+ + + G+ LG+N Q++++V G K
Sbjct: 60 NSLKFDPNSVAKKAGIKGDAFKMNSTFGGVYLGYNYQIDNWVIGAEGDAQLYFGGKDKAA 119
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
++ +G ++ GY++D L Y GG + SS + R
Sbjct: 120 ASGNGRFAASRGFGSARVRLGYAMDRFLPYVTGGAAFENLEISSKKD------GKVVARD 173
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ LG GLDY + Y+++ S + D+ D ++H +
Sbjct: 174 NKTRVGYTLGAGLDYAITEKWIGKVEYQFMDFGKKSYD-----LDIGSADLSSHSHTMRV 228
Query: 237 GINMHF 242
G++ F
Sbjct: 229 GLSYKF 234
>gi|299135509|ref|ZP_07028695.1| OmpA domain protein transmembrane region-containing protein [Afipia
sp. 1NLS2]
gi|298589733|gb|EFI49942.1| OmpA domain protein transmembrane region-containing protein [Afipia
sp. 1NLS2]
Length = 229
Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 29/210 (13%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLY----ETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
Y Y W+G Y+G + + + A + + +S + G+ +G N Q
Sbjct: 28 PAYVAPIYN-WTGFYIGAQVGGAFQGSSGYNATAGVVGTRDDSSFIGGGV---VGANYQF 83
Query: 100 ED-FVFGINCHTTAAKD------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+V G+ + D+T + K V + GY+ +IY GG
Sbjct: 84 APNWVVGLEGEFNGLSNNRHTFTDATANTVSIKNDWLASVTGRLGYTWGPGMIYAKGGVA 143
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ N D + + +G GL+YM S Y+Y
Sbjct: 144 FRD---------NGGVTSNVVALVDRNDTGYTVGAGLEYMFAPAWSAKVEYQYYNF---- 190
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++N + + H GIN HF
Sbjct: 191 -DHTNVAFATNTASYRDDLHTVKAGINYHF 219
>gi|148255876|ref|YP_001240461.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146408049|gb|ABQ36555.1| putative outer-membrane protein precursor [Bradyrhizobium sp.
BTAi1]
Length = 237
Score = 92.2 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 22/241 (9%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L +V+ + +LA DL R Y WSG Y+G++ +
Sbjct: 4 LLLTTTALVVLASPALAADL-AARPYTKAPPPVMAAIY------DWSGFYIGVNGGGGWT 56
Query: 69 THPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINC-----HTTAAKDDSTFY-R 121
+ + + G +G ++G+ Q+ FVFG+ + F R
Sbjct: 57 HNTWDVVGGGREGSHDSSGGTIGGQVGYRWQMGQFVFGVEAQGNWADFAGDNQSALFGTR 116
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ K +G + GY+ +++L+Y GG I S+ + + + G D
Sbjct: 117 NRTKTDAFGLFTGQVGYAFNNVLVYAKGGAA----ITSNTYTITNAATGAFLGSNDNTRW 172
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
V+G GL+Y + SL Y ++ +V+ SD K +A + + +N
Sbjct: 173 GGVVGAGLEYGFAPNWSLGVEYDHLFMDRQTVSFGALGSD----SIKQDADLFTARLNYR 228
Query: 242 F 242
F
Sbjct: 229 F 229
>gi|227821495|ref|YP_002825465.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340494|gb|ACP24712.1| putative outer membrane protein [Sinorhizobium fredii NGR234]
Length = 212
Score = 92.2 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 22/198 (11%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
EY + WSG YVG + Y + N + G G+ G+N+Q V+
Sbjct: 37 EYTEPAVKNWSGAYVGGTANWHYG------EADATGNNKSVAFGGGLYGGYNVQDGQMVY 90
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
G A +DST K K + G + + G ++ +L+YG G S+
Sbjct: 91 GGEADVNYAGNDSTSSGRKVKQGVNGSLRGRVGVDMNPVLVYGTAGLALGNAKLSTPAGS 150
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ G G + V +++ YRY + + + ++
Sbjct: 151 DDKTL-----------VGWTAGAGAETFVTDNVTARVEYRYTDYA-----SKDFRAGGST 194
Query: 225 VDRKGNAHIASLGINMHF 242
V + H LG+ + F
Sbjct: 195 VSSGYDEHSVRLGMGVKF 212
>gi|327193361|gb|EGE60264.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 211
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 71/209 (33%), Gaps = 24/209 (11%)
Query: 34 IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL 93
+D EA + G W G Y+G + +
Sbjct: 27 VDQVPEAPVAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFT 78
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+N Q V+G+ + DD + +K KY G V + GY ++ L+YG G
Sbjct: 79 GYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAL 138
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ KV S +K + +G G++ V +I+ YRY +
Sbjct: 139 GNI------KVSDGTSDESKTNY-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDY 187
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + R + + LGI + F
Sbjct: 188 DLDSGS-----FSRGYDENSVKLGIGVKF 211
>gi|159185257|ref|NP_355480.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|159140518|gb|AAK88265.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 209
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 70/204 (34%), Gaps = 24/204 (11%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
+ +Y + WSG YVG H + + + G++ G+N Q
Sbjct: 30 NTQQSFDYGNQPAFSWSGAYVGAHGGVASP--KFSPLASGRGLTG------GVQAGYNFQ 81
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
V G + +D+ + + G LKAG ++D L+YG G D
Sbjct: 82 FGSGVVGAEVEGSYLGNDARVPNGRLRERFRGAAKLKAGVALDHTLLYGTAGLTTTKFKD 141
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
N DG ++G G++ +S Y Y+ + S+
Sbjct: 142 -----------GNGVTGPDGWKQGYLVGAGVEQSFGGGLSAKFEYNYVSTGNVATTTSSG 190
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+S + D H+ G+N F
Sbjct: 191 RSKTDVSD-----HVIKAGLNYRF 209
>gi|239830970|ref|ZP_04679299.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
gi|239823237|gb|EEQ94805.1| Porin subfamily protein [Ochrobactrum intermedium LMG 3301]
Length = 240
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 64/203 (31%), Gaps = 21/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 49 PSFTWTGAYIGGQIGYGWGKSNFDGDVFSYGDVKPDGFLGGVYAGYNFDLGNNIVLGIDG 108
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
D + K G V + GY+VD + Y GG + +S
Sbjct: 109 DVTYNDVSKDIDVFDGDLAVGDFETKLRWSGAVRARVGYAVDRFMPYLAGGVAFGNIKNS 168
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
S++ + G G+DY ++ + YRY + ++
Sbjct: 169 GSIDGIGSFSESKTL------TGWTAGAGVDYAATDNLIVRLEYRYTDYGDKDIDFGGLN 222
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+++ + LG+ F
Sbjct: 223 -----INQDFKTNEVRLGVAYKF 240
>gi|190891163|ref|YP_001977705.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|190696442|gb|ACE90527.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 211
Score = 91.8 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 71/209 (33%), Gaps = 24/209 (11%)
Query: 34 IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL 93
+D EA + G W G Y+G + +
Sbjct: 27 VDQVPEAPVAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFT 78
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+N Q V+G+ + DD + +K KY G V + GY ++ L+YG G
Sbjct: 79 GYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAL 138
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ S SD SK A +G G++ V +I+ YRY +
Sbjct: 139 GNIKVS---DGTSDESKTAY--------GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDY 187
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + R + + LGI + F
Sbjct: 188 DLDSGS-----FSRGYDENSVKLGIGVKF 211
>gi|323136580|ref|ZP_08071661.1| FecR protein [Methylocystis sp. ATCC 49242]
gi|322397897|gb|EFY00418.1| FecR protein [Methylocystis sp. ATCC 49242]
Length = 438
Score = 91.8 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 16/200 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTT- 111
W G +G ++ AD + L G++LG+N Q+ + V G
Sbjct: 232 WGGLSIGFNVGTAIGNAEFADPVPMNGV-GFLG---GLKLGYNWQVLPNIVAGFETDAEY 287
Query: 112 ----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + G + GY+ + L+YG GG ++I + ++
Sbjct: 288 RSEIGGSTNGHGTVSSTRGGYLGTFRGRLGYAFNRWLVYGTGGLAYGHII-APRTFSGAN 346
Query: 168 NSKNAK----GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAKSDV 222
A + + + +G G+ + + +IS+ A Y Y+ H + +N
Sbjct: 347 LLGPAYAFGTSQNNPFLAGWTVGGGVQFALTSNISVKAEYLYVKLQHDYPTYATNVALYP 406
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ H G++ F
Sbjct: 407 VPICNMSGLHSIRAGVSYGF 426
>gi|115524922|ref|YP_781833.1| hypothetical protein RPE_2916 [Rhodopseudomonas palustris BisA53]
gi|115518869|gb|ABJ06853.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 578
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 74/229 (32%), Gaps = 37/229 (16%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRK---------TYNSLLPNGL---------- 89
W+G YVG H+ + +D + Y P GL
Sbjct: 339 PVAVHWTGAYVGGHLGAGFGPKHWSDPLGSSMALVDPGPPDYAVGTPRGLNMAGFGKSTP 398
Query: 90 ------GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLK--------EKYFIYGDVVLK 135
G+++G+N+Q+++ V G A + G +
Sbjct: 399 MAGGLGGLQIGYNVQIDNTVLGFEVEAALADLKGSHTIYSGIGGGQAEAHTKALGTFAGR 458
Query: 136 AGYSVDSLLIYGMGGFGGA---YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
GY++D LIY G A + +++S V+G G++Y
Sbjct: 459 LGYALDRSLIYVKAGGAWAVTDHTLNTSSVYGNVQGLDCCGDTVSSSRFGWVVGAGIEYA 518
Query: 193 VNYDISLSASYRYIPHHIHSVN-NSNAKSDVERVDRKGNAHIASLGINM 240
VN S + Y Y+ S+ +NA + H +G+N
Sbjct: 519 VNRTWSATFEYDYMDFGTQSIRFPTNAGLGLPPAAIDQAFHTVKMGVNY 567
>gi|209548691|ref|YP_002280608.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534447|gb|ACI54382.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 211
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 69/204 (33%), Gaps = 24/204 (11%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
EA E G W G Y+G + + G+N Q
Sbjct: 32 EAPVAQEAPVKPAGSWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFTGYNWQ 83
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
V+G+ + DD + +K KY G V + GY ++ L+YG G V
Sbjct: 84 QGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNV-- 141
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
KV S +K + +G G++ V +I+ YRY + + +
Sbjct: 142 ----KVSDGTSDESKTNY-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYDLDSG 192
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
R + + LGI + F
Sbjct: 193 S-----FSRGYDENSVKLGIGVKF 211
>gi|148256482|ref|YP_001241067.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146408655|gb|ABQ37161.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 236
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 20/197 (10%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
W+G Y+G H+ + + + N + G++ G + Q +V GI +
Sbjct: 43 WTGFYIGGHLGGAFAGNNSLEGNNGRFLG-------GVQGGFDYQFAPNWVLGIEAQYSW 95
Query: 113 AKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
++T + G V + GY+ L+Y GG+ D + V
Sbjct: 96 MDRNTTNFGFPGATVVSSTGANQLGSVTGRLGYTWGPALLYAKGGYAW---RDGNALGVN 152
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+G GL+YM + S A Y+Y + + V
Sbjct: 153 VAGVPAGFTTSGNTKDGYTVGGGLEYMFAPNWSAKAEYQYYNFGNTTFTG--GPAPVVGS 210
Query: 226 DRKGNAHIASLGINMHF 242
+ H +G+N F
Sbjct: 211 RFNSDEHTVKVGVNYRF 227
>gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56]
Length = 211
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 24/193 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W G Y+G + + G+N Q V+G+
Sbjct: 43 PAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFTGYNWQQGQIVYGVESD 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ DD + +K KY G V + GY ++ L+YG G + KV D S
Sbjct: 95 LGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNI------KVSDDTS 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+K + +G G++ V +I+ YRY + + + R
Sbjct: 149 DESKTAY-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYDLDSGS-----FSRGY 198
Query: 230 NAHIASLGINMHF 242
+ + LGI + F
Sbjct: 199 DENSVKLGIGVKF 211
>gi|90424594|ref|YP_532964.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
gi|90106608|gb|ABD88645.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
Length = 236
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 77/242 (31%), Gaps = 27/242 (11%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L +V+ + A DL P V Y W+G Y+G H+ +
Sbjct: 4 LLLGTAALMVLAAPAFAADLPAPTYTKAPAYTAPEVVYN------WTGFYIGGHVGGAFA 57
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYR------ 121
N + N G G+++G + Q ++V G+ + +
Sbjct: 58 GD------NNISGNDGQFLG-GVQIGADYQFTRNWVVGLEAQYSWLPSNDNGGLAFPGGS 110
Query: 122 -LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ + G V + GY+ L+Y GG+ + + H
Sbjct: 111 LVTQDNRGLGSVTGRLGYTWGPALLYAKGGYAFRDSSL----DLSNTGVGVPFTTSGNHR 166
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+G GL+YM + S Y+Y + DV + + H G+N
Sbjct: 167 DGYTVGAGLEYMFAPNWSAKVEYQYYDFGNTTFTG--GPPDVLGASVRNDEHTVKAGLNY 224
Query: 241 HF 242
F
Sbjct: 225 RF 226
>gi|158425350|ref|YP_001526642.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
gi|158332239|dbj|BAF89724.1| outer membrane protein Omp31 precursor [Azorhizobium caulinodans
ORS 571]
Length = 233
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 69/202 (34%), Gaps = 19/202 (9%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINC 108
W+G Y+G + + + + +G G +LG+N Q + V G+
Sbjct: 40 FSWTGFYIGANAGFGGDKYNYDFGAPGFGSATANSSGFFAGGQLGYNYQFANNVVLGLET 99
Query: 109 HTTAAKDDS--------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
+ + + L +G V + GY+ D L Y GGF +S
Sbjct: 100 DIQWSGIEGDTTLASGGSVANLNSSLDYFGTVRARVGYAFDRFLPYITGGFAY---GESK 156
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ G G + LG G++Y + + Y Y+ +++SN
Sbjct: 157 TSITTITPTTLTFGEGSGTKTGWTLGGGVEYAFTNNWTFKTEYLYVD-----LDDSNYGV 211
Query: 221 DVERVDRKGNAHIASLGINMHF 242
V+ H GIN F
Sbjct: 212 GAGAVNVDNKFHTVKAGINYKF 233
>gi|85713475|ref|ZP_01044465.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A]
gi|85699379|gb|EAQ37246.1| carbohydrate-selective porin OprB [Nitrobacter sp. Nb-311A]
Length = 668
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 67/203 (33%), Gaps = 23/203 (11%)
Query: 50 EYGIWSGNYVGLH--ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGI 106
W+G Y+G H T LAD T N G++ G+N+QL + G+
Sbjct: 46 PIIQWTGLYLGAHAGFGGGRSTATLADPAPITTGNDFGGLISGVQAGYNLQLPSGLLLGV 105
Query: 107 NCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ +K + + ++ G + GY+ L Y GG A
Sbjct: 106 ETDISFPSYIESNSFVSKLATARSDVTHQWDFIGSARGRIGYATGPWLTYATGGLAIAG- 164
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
E+ +D + + G V G GL+Y S Y Y +V
Sbjct: 165 -----ERYLNDPPSGDREKTLGSRLGWVAGAGLEYAFAPHWSARLEYLYYQFDKTNVQFP 219
Query: 217 NAKSDVERVDRKGNAHIASLGIN 239
+A + +G+N
Sbjct: 220 SAAQ----YTATMDFQSIRVGLN 238
>gi|296445958|ref|ZP_06887908.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296256476|gb|EFH03553.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 275
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/223 (20%), Positives = 81/223 (36%), Gaps = 33/223 (14%)
Query: 53 IWSGNYVGLHISRLYET------------HPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
+WSG YVGL+ ++ + + + S G ++G+N Q
Sbjct: 40 LWSGFYVGLNAGYTWDERGNVLVNSPANIWAVGASGSGALATSNDGFIGGGQIGYNYQFG 99
Query: 101 D-FVFGINCHTTAAKDDSTFYRL-------------KEKYFIYGDVVLKAGYSVD-SLLI 145
FV G+ ++ + ++ G V +AGY + +LL+
Sbjct: 100 QTFVVGVEADIQGVGGSNSSATVGNFVTPVSSAITASKQLDYLGTVRGRAGYLISPTLLL 159
Query: 146 YGMGG--FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
YG GG +G A + + + + + +A F G G++++ S A Y
Sbjct: 160 YGTGGVAYGQANLNATVTQTGLNGATGSATVGFSDTRVGWTAGGGVEWLFMPQWSAKAEY 219
Query: 204 RYIPHHIHSVNNSNAKSDV----ERVDRKGNAHIASLGINMHF 242
Y S +N+ A V V H+ G+N HF
Sbjct: 220 LYYDLGRASASNTLAFQGVNVGATTVSSSFKGHVVRAGVNYHF 262
>gi|148255740|ref|YP_001240325.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407913|gb|ABQ36419.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. BTAi1]
Length = 212
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 65/198 (32%), Gaps = 27/198 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
W+G Y+G E A G +G+N Q VFG+
Sbjct: 37 PVQTWTGFYIGAFGGYANEDASTAALKGGFA---------GGTVGYNWQQGPLVFGLEAD 87
Query: 110 TTAAKDDSTFYR-----LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
A ++T L ++ G V + GY+ D++L+YG GG+ S+
Sbjct: 88 AAWADINATVGIPGVFGLTDRIESTGTVRGRIGYAFDTVLLYGTGGYAWGNNKLSATVGG 147
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + S G G+++M SL Y Y +
Sbjct: 148 VAGSETK-------FLSGWAAGAGVEWMFAPKWSLKGEYLYKSLESSTYFGGAVPL---- 196
Query: 225 VDRKGNAHIASLGINMHF 242
N H +G+N HF
Sbjct: 197 --GTLNLHTFQVGVNYHF 212
>gi|27379978|ref|NP_771507.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353131|dbj|BAC50132.1| bll4867 [Bradyrhizobium japonicum USDA 110]
Length = 258
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 14/198 (7%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLEDFVFGINC-- 108
WSG Y+G++ R+ + +G ++G+ Q +VFG+
Sbjct: 60 YDWSGFYIGINGGGGSAHSTWDLVGGGREGSHDATGGTVGGQIGYRWQSGQWVFGVEGQG 119
Query: 109 ---HTTAAKDDSTFY-RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + F R + K +G + + GY+ +++LIY GG A
Sbjct: 120 NWADFSGDNVSALFATRNRSKIDSFGLITGQVGYAWNNVLIYVKGGAAVAGTKYEVF--- 176
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
S S D +G GL+Y + S+ Y +I V + +R
Sbjct: 177 -STASGALLSSNDQTRWGGTVGAGLEYGFAPNWSVGVEYNHIFLQDKDV-TFAGLAGTDR 234
Query: 225 VDRKGNAHIASLGINMHF 242
+ + + + +N F
Sbjct: 235 IRQDVDMGLVR--LNYKF 250
>gi|86357119|ref|YP_469011.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86281221|gb|ABC90284.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 211
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 24/193 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W G Y+G + + G+N Q V+G+
Sbjct: 43 PAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFTGYNWQAGQIVYGVESD 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ DD + +K KY G V + GY ++ L+YG G V KV S
Sbjct: 95 LGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNV------KVSDGTS 148
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+K + +G G++ V +I+ YRY + + + R
Sbjct: 149 DESKTNY-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYDLDSGS-----FSRGY 198
Query: 230 NAHIASLGINMHF 242
+ + LGI + F
Sbjct: 199 DENSVKLGIGVKF 211
>gi|146339995|ref|YP_001205043.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146192801|emb|CAL76806.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 237
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 20/199 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT 110
W+G Y+G H+ + + G++ G + Q +V GI
Sbjct: 41 YDWTGFYIGGHLGGAFAG-------GNGLEGNNARFLGGVQGGFDYQFAPNWVLGIEAQY 93
Query: 111 TAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ ++T + G V + GY+ L+Y GG+ D +
Sbjct: 94 SWMDRNTTNFGFPGATVVTSTGANQLGSVTGRLGYTWGPALLYAKGGYAW---RDGNGLG 150
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
V +G GL+YM + S A Y+Y + A
Sbjct: 151 VNVAGVPAGFTTSGNAKDGYTVGAGLEYMFAPNWSAKAEYQYYNFGNTTFTGGPAPVVGS 210
Query: 224 RVDRKGNAHIASLGINMHF 242
R + + H +G+N F
Sbjct: 211 RFNNED--HTVKVGVNYRF 227
>gi|153007478|ref|YP_001368693.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151559366|gb|ABS12864.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 64/203 (31%), Gaps = 21/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
WSG Y+G I + + + GI G+N L + V GI+
Sbjct: 38 PTFTWSGAYIGGQIGYGWGKSDFSGDVYSFGNVKPDGFLGGIYAGYNFDLGNSIVLGIDG 97
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
D + K G V + GY+VD + Y GG + +S
Sbjct: 98 DVTYNDVSKDIDVYSGDLAVGDFETKLRWSGAVRARVGYAVDRFMPYLAGGVAFGNIKNS 157
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
S++ + G G+DY ++ + YRY + +
Sbjct: 158 GSIDGIGSFSESKTL------TGWTAGAGVDYAATDNLIVRLEYRYTDYGDKDIEFGGLN 211
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V++ + LG+ F
Sbjct: 212 -----VNQDFKTNEVRLGVAYKF 229
>gi|83308663|emb|CAJ01571.1| outer membrane protein [uncultured bacterium]
Length = 276
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 82/259 (31%), Gaps = 33/259 (12%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET------- 69
++ ++A+ DL + A V W+G Y+G + + T
Sbjct: 6 LLASVGAIALTGSAAFAADLPSRAPPPVYLPPPPIFTWTGFYIGGQVGGAWGTGGSSFTA 65
Query: 70 -HPLADTINRKTYNSLLPNGL--GIELGHNIQLEDF--------VFGINCHTTAAKDDST 118
+ ++ P+G+ G +G + Q+ + V G+ + T
Sbjct: 66 FDAVTGRFVDASFGGGNPSGVIGGGHIGFDYQIPTWNWFSSSGVVIGVEGSVDGSSLSKT 125
Query: 119 -------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEK 163
F + I G + + G + D +L+Y GG FGG
Sbjct: 126 TTVTLPGIFLNNGFATARTSADIQGSIRGRLGIAWDRVLVYATGGVAFGGINSDIQVNGV 185
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + + +G G++Y + + S+ A YR+ S + S A
Sbjct: 186 DAAGVPFFGQRNRSNDRTGWTVGGGIEYALTPNWSVGAEYRFTDFGTISRSASLADGSFI 245
Query: 224 RVDRKGNAHIASLGINMHF 242
+ R + F
Sbjct: 246 SLSRTLQENQVQARFTYLF 264
>gi|297248917|ref|ZP_06932626.1| Omp31b [Brucella abortus bv. 5 str. B3196]
gi|297174251|gb|EFH33607.1| Omp31b [Brucella abortus bv. 5 str. B3196]
Length = 176
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 17/163 (10%)
Query: 90 GIELGHNIQLED-FVFGINCHTTA--------AKDDSTFYRLKEKYFIYGDVVLKAGY-S 139
G++ G+N QL++ V G A + + K +G V + GY +
Sbjct: 21 GVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTA 80
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+ L++YG GG V + D++ D + LG G +Y +N + +L
Sbjct: 81 TERLMVYGTGGLAYGKVKSA---FNLGDDASALHTWSDKTKAGWTLGAGAEYAINNNWTL 137
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ Y Y ++ + + ++ K N H +G+N F
Sbjct: 138 KSEYLYTDLGKRNLVDVDNSF----LESKVNFHTVRVGLNYKF 176
>gi|27379811|ref|NP_771340.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352964|dbj|BAC49965.1| blr4700 [Bradyrhizobium japonicum USDA 110]
Length = 229
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 68/202 (33%), Gaps = 34/202 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G+ +E N + +G G+N Q + VFG+ T A
Sbjct: 41 WTGFYLGIVGGGAWE--------NGSGDPKMKGGFVGGTAGYNWQTGNVVFGVEADGTWA 92
Query: 114 KDDST-------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
++ + K G V + GY+V+++L YG GG+ +
Sbjct: 93 DVSASATGATVVPGFGVATATVSSKTDAMGTVRGRIGYAVNNVLFYGTGGYAWIDNKITL 152
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
S + S +G G++ S+ Y Y S+ S
Sbjct: 153 SALGVSVSDSK-------FHSGWTVGAGVEAFFAPQWSVKGEYLY-----RSLGGETYFS 200
Query: 221 DVERVDRKGNAHIASLGINMHF 242
N H +G+N HF
Sbjct: 201 GALPT-GTLNFHTVQVGVNYHF 221
>gi|116254616|ref|YP_770452.1| putative outer-membrane immunogenic protein precursor [Rhizobium
leguminosarum bv. viciae 3841]
gi|115259264|emb|CAK10397.1| putative outer-membrane immunogenic protein precursor [Rhizobium
leguminosarum bv. viciae 3841]
Length = 226
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 75/232 (32%), Gaps = 24/232 (10%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
F V +S+++ + A DL + + Y W+G Y GLH
Sbjct: 19 FSVGVSMLMACGASAADL-------ADHSVPSAPSYDAPGTFSWAGAYAGLHGGVAASKF 71
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
+N+ +G ++G+N Q VFG + ++ + G
Sbjct: 72 --------NPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVESRFRG 123
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
KAG D +YG G L S K D + G G++
Sbjct: 124 AAKAKAGLGFDRTFVYGTAGVTTTEFEGHRLV----SGSDKWKSGPDSWKHGYLFGGGVE 179
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +S Y Y+ ++ + S N ++ G+N F
Sbjct: 180 HAFSGGVSAKIEYNYVINNAVPTTSGGISS-----RSDLNDNVIEAGLNFRF 226
>gi|90426297|ref|YP_534667.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
gi|90108311|gb|ABD90348.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB18]
Length = 251
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 82/239 (34%), Gaps = 35/239 (14%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
V +++ +LA DL Y W+G Y+G H+ +
Sbjct: 30 VALVAMATTVPALAADLGARTYTK-------APAYVAAPIYNWTGFYIGGHVGGAFVGD- 81
Query: 72 LADTINRKTYNSLLPNGLG-IELGHNIQLED-FVFGINCHTTAAKDDSTF-----YRLKE 124
D+I S LG ++ G++ Q +V G+ + + Y +
Sbjct: 82 --DSIGTGATRSSDGTFLGGVQGGYDYQFAPNWVLGVEAQYSWLDQGTDPVLVGPYSFSD 139
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGA-YVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K G V + GY+ L+Y GG+ A Y +L V + S +
Sbjct: 140 KQKGLGSVTGRIGYTWGPALLYAKGGYAFADYDTTVTLGGVGAAVSSKS--------DGY 191
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G GL+Y+ + S Y+Y + K+D H+ G+N F
Sbjct: 192 TVGAGLEYLFAQNWSGKVEYQYYDFGNVDFGGFSFKND---------EHVVKAGLNYRF 241
>gi|316933367|ref|YP_004108349.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1]
gi|315601081|gb|ADU43616.1| OmpA-like transmembrane region [Rhodopseudomonas palustris DX-1]
Length = 240
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 77/233 (33%), Gaps = 24/233 (10%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
I + + A DL PR A + W+G YVG H+ +
Sbjct: 15 IALSAPAFAADL-PPRPYTKAAPAYTAPQV----VYNWTGFYVGGHVGGAWAGDNSIPGN 69
Query: 77 NRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLK------EKYFIY 129
+ + + G++ G + Q ++V GI + ++T E
Sbjct: 70 SGRFFG-------GVQGGADYQFATNWVIGIEAQYSWMSSNNTGVIFPGGSTAVEDTRGL 122
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ L+Y GG+ DS L + A +G GL
Sbjct: 123 GSVTGRLGYAWGPTLVYAKGGYAW---RDSDLGVATAAGFPAAYTTSGSRNDGYTVGAGL 179
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y+ S Y+Y + +DV + + H GIN F
Sbjct: 180 EYLFAPSWSAKVEYQYYKFGDTTFTG--GPADVVGTSFRNDEHTVKAGINYRF 230
>gi|27378846|ref|NP_770375.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27351995|dbj|BAC49000.1| bll3735 [Bradyrhizobium japonicum USDA 110]
Length = 223
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 63/217 (29%), Gaps = 38/217 (17%)
Query: 39 EADNNVEYQDD--------EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG 90
AD + Y W+G Y G + + + T + G
Sbjct: 28 AADLSPRYAAPASAYTAPQPVYSWTGLYAGFNAGYAESGDDAFNNLAGATGGKVKGAVGG 87
Query: 91 IELGHNIQLED-FVFGINCHTTAA--KDDSTFYRLKEKYFIYGDVVLKAGYSV--DSLLI 145
+++G+N QL FV GI K+ Y +AG + LL
Sbjct: 88 VQIGYNYQLSPMFVVGIENDFEGGDIKNHDALNSAAVSLPWYMTGRARAGIATMDSRLLF 147
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+G G D + K+ G G+++ S A Y Y
Sbjct: 148 FGTAGLAAGEFKDGPINKM---------------KMGWTAGGGVEWAFLPKWSAKAEYLY 192
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + NA H +G+N HF
Sbjct: 193 TEFKHDDLPDWNAA----------KFHTFRVGVNYHF 219
>gi|118581633|ref|YP_902883.1| OmpA domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118504343|gb|ABL00826.1| OmpA domain protein transmembrane region-containing protein
[Pelobacter propionicus DSM 2379]
Length = 230
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 71/211 (33%), Gaps = 20/211 (9%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADT-INRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
D+ W+G Y G++ + K + + +G +G N+Q + GI
Sbjct: 24 DNAPHNWTGFYAGINGGYGWGETQWDYVGSTGKADHHINGGLIGGTMGANLQFFAYQGGI 83
Query: 107 NCHTTAAKDD-------------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+ D + +R K V + G + D L I+G GG
Sbjct: 84 PAVVGGVESDFDWADLGDDGPCPNPRFRAKSSIDALATVRGRLGLAFDRLFIFGTGGLAV 143
Query: 154 AYVIDSSLEKVESDN--SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A +++ + S AK + V+G+G +Y V ++S Y+Y
Sbjct: 144 AKTDVETVDTWGTSVPPSGTAKNGEGKWKTGYVVGVGAEYAVWKNLSFKVEYQYYDLGRS 203
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N V I GIN F
Sbjct: 204 TYRVDNDIPVKAGVRGD----IIRTGINYTF 230
>gi|237814592|ref|ZP_04593590.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|237789429|gb|EEP63639.1| Porin subfamily protein [Brucella abortus str. 2308 A]
Length = 239
Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 22/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 49 PTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDG 108
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+++ + + G V +AGY+VD L Y GG A+
Sbjct: 109 DVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLR 166
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + E +K + +G G+DY ++ L YRY + +A
Sbjct: 167 NRGEFEGTGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA 221
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 222 -----VTNNFKTNDIRFGVAYKF 239
>gi|307315839|ref|ZP_07595348.1| porin [Sinorhizobium meliloti BL225C]
gi|306898513|gb|EFN29191.1| porin [Sinorhizobium meliloti BL225C]
Length = 208
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 68/207 (32%), Gaps = 23/207 (11%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN 96
F+ + + WSG Y+G+ + + + LG +G+N
Sbjct: 24 FDNSALPPVSEAP--FSWSGAYIGVQGGGGWASGEFSG-FGINGSEDANGGSLGGFVGYN 80
Query: 97 IQL-EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
Q + V GI ++ + G V + GY+ D+ LIY G+
Sbjct: 81 YQFDNNLVLGIEGDVEHDWNEQQVFGADFGTDWAGSVRGRLGYAFDNALIYATAGWAATR 140
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ + + N +G GLDY + YRY +
Sbjct: 141 GYVEVPGLGKDEKTFN----------GYTVGAGLDYAFTNQVFGRVEYRYNDYGD----- 185
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
D++ ++ + H +G+ + F
Sbjct: 186 ----QDLQGINVDVDQHAVKVGLGIKF 208
>gi|254700931|ref|ZP_05162759.1| outer membrane protein, putative [Brucella suis bv. 5 str. 513]
gi|261751446|ref|ZP_05995155.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261741199|gb|EEY29125.1| outer membrane protein [Brucella suis bv. 5 str. 513]
Length = 232
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 24/206 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y G + + L + N T + PNG G+ G+N + F+ G+
Sbjct: 38 PSFSWAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGL 96
Query: 107 NCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ + + + G V +AGY++D + Y GG +
Sbjct: 97 DANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGIAFGGI 156
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+S E + +K + + +G G+DY ++ L YRY +
Sbjct: 157 KNSLRIGGEESSKSKSKTQ-----TGWTVGAGIDYAATDNVLLRLEYRYTDY-----GKK 206
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
N + + LG+ F
Sbjct: 207 NFGLNDLDTRGSFKTNDIRLGVAYKF 232
>gi|146340936|ref|YP_001205984.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193742|emb|CAL77759.1| putative outer-membrane protein, putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 217
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 30/198 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G T + S G +G+N Q +V+G+ A
Sbjct: 41 WAGFYLGAFGGYA--------TTDNGGVLSPKGGFAGGTIGYNWQSGAWVYGLEADAAWA 92
Query: 114 KDDSTFYRL---------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
+ + K G + GY+ +++L+YG GG+ A +
Sbjct: 93 DIKDSVGGVVPGFGAVGIASKIDATGTARGRVGYAFNNVLLYGTGGYAWANNKITLSALG 152
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ S G G++ + S+ A Y Y + +
Sbjct: 153 VGVSDTQ-------FLSGWTAGGGVEVLFAPKWSVKAEYLYKSFDGKTYFGGALPT---- 201
Query: 225 VDRKGNAHIASLGINMHF 242
N H +G+N HF
Sbjct: 202 --GNLNLHSVQVGVNYHF 217
>gi|225853091|ref|YP_002733324.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|256263422|ref|ZP_05465954.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|260565169|ref|ZP_05835653.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|265991667|ref|ZP_06104224.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|265995505|ref|ZP_06108062.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|225641456|gb|ACO01370.1| outer membrane protein Omp31 [Brucella melitensis ATCC 23457]
gi|260151237|gb|EEW86331.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. 16M]
gi|262766618|gb|EEZ12407.1| outer membrane protein 31b [Brucella melitensis bv. 3 str. Ether]
gi|263002451|gb|EEZ15026.1| outer membrane protein 31b [Brucella melitensis bv. 1 str. Rev.1]
gi|263093434|gb|EEZ17484.1| Omp31b [Brucella melitensis bv. 2 str. 63/9]
gi|326409637|gb|ADZ66702.1| outer membrane protein Omp31 [Brucella melitensis M28]
gi|326539339|gb|ADZ87554.1| outer membrane protein Omp31 [Brucella melitensis M5-90]
Length = 202
Score = 89.5 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAA---------- 113
R + + D + G G++ G+N QL + V G +
Sbjct: 7 RHWSPYWAQDFSGSLDVTASGFVG-GVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNG 65
Query: 114 -----------KDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI--DS 159
D +F L+ K +G V + G++ + L++YG GG V S
Sbjct: 66 DLSDIGVAGNLSGDESFG-LETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLS 124
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N + +
Sbjct: 125 AYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 179
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H LG+N F
Sbjct: 180 NVNINMENKVNFHTVRLGLNYKF 202
>gi|306842592|ref|ZP_07475241.1| outer membrane protein [Brucella sp. BO2]
gi|306287237|gb|EFM58725.1| outer membrane protein [Brucella sp. BO2]
Length = 228
Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 65/203 (32%), Gaps = 22/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 38 PTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDG 97
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
++ + + G V +AGY+VD L Y GG A+
Sbjct: 98 DVTYNDVSKKIDFLDENDAAATFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLR 155
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + E +K + +G G+DY ++ L YRY + +A
Sbjct: 156 NRGEFEGTGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGDKDYGFDDAA 210
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 211 -----VTNNFKTNDIRFGVAYKF 228
>gi|209885837|ref|YP_002289694.1| OmpA domain protein transmembrane region-containing protein
[Oligotropha carboxidovorans OM5]
gi|209874033|gb|ACI93829.1| OmpA domain protein transmembrane region-containing protein
[Oligotropha carboxidovorans OM5]
Length = 236
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 67/206 (32%), Gaps = 30/206 (14%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADT-----INRKTYNSLLPNGLGIELGHNIQLED-FV 103
W+G Y+G + ++ T + +S L G+ LG N Q +V
Sbjct: 38 PIYNWTGLYIGAQVGGAFQGSSGFVTDDPLVTGNRDDSSFLGGGV---LGANYQFSPNWV 94
Query: 104 FGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
GI ++ F ++ K V + GY+ +IY GG
Sbjct: 95 LGIEGEFNGLSNNRYTFTDGFDGIRVKNDWLASVTGRLGYTWGPGMIYAKGGVAF----- 149
Query: 159 SSLEKVESDNSKNAKGRF--DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ A F + +G GL+YM S Y+Y ++
Sbjct: 150 ------RDNGGIAATTPFLVSRDTTGYTVGAGLEYMFAPAWSAKIEYQYYDFDRTAL--- 200
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ V + + H GIN HF
Sbjct: 201 TFGTLPSTVSYRDDLHTVKAGINYHF 226
>gi|17986685|ref|NP_539319.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|256045237|ref|ZP_05448134.1| outer membrane protein Omp31 [Brucella melitensis bv. 1 str. Rev.1]
gi|256114189|ref|ZP_05454943.1| outer membrane protein Omp31 [Brucella melitensis bv. 3 str. Ether]
gi|17982306|gb|AAL51583.1| 31 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
Length = 201
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAA---------- 113
R + + D + G G++ G+N QL + V G +
Sbjct: 6 RHWSPYWAQDFSGSLDVTASGFVG-GVQAGYNWQLANGLVLGGEADFQGSTVKSKLVDNG 64
Query: 114 -----------KDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI--DS 159
D +F L+ K +G V + G++ + L++YG GG V S
Sbjct: 65 DLSDIGVAGNLSGDESFG-LETKVQWFGTVRARLGFTPTERLMVYGTGGLAYGKVKTSLS 123
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + ES ++ N+K + + LG G++Y V + +L + Y Y S N + +
Sbjct: 124 AYDDGESFSAGNSKTK-----AGWTLGAGVEYAVTNNWTLKSEYLYTDLGKRSFNYIDEE 178
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ ++ K N H LG+N F
Sbjct: 179 NVNINMENKVNFHTVRLGLNYKF 201
>gi|27375206|ref|NP_766735.1| hypothetical protein blr0095 [Bradyrhizobium japonicum USDA 110]
gi|27348342|dbj|BAC45360.1| blr0095 [Bradyrhizobium japonicum USDA 110]
Length = 675
Score = 89.1 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/236 (15%), Positives = 69/236 (29%), Gaps = 36/236 (15%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS--RLYETHPLAD 74
+V+P S A DL L W+G Y+G H+ R + L D
Sbjct: 33 MVLPAASRAADLPLKAPALKT-------------VYDWTGLYIGAHVGVTRGTSSATLID 79
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLK---------- 123
+ G++ G+N +L + G+ + + + +
Sbjct: 80 PTLATDDHVFTGATGGVQAGYNWRLNSGLLLGVEGDISFPNYLPSNHVVSSAATVLSSAE 139
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
E++ + + GY+ + L Y GG S ++
Sbjct: 140 ERWDYVASLRARLGYTTGNWLFYATGGAAFTGERFLSTPTGGTEEKVLHTR------FGW 193
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G G++Y S Y Y +V + + +G+N
Sbjct: 194 TAGGGVEYAFAPHWSARLEYLYSKFDNANVTFPSGAQ----YSSSMDFQSLRIGLN 245
>gi|148559219|ref|YP_001258157.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|46251231|gb|AAS84586.1| Omp25c [Brucella ovis]
gi|148370476|gb|ABQ60455.1| putative outer membrane protein [Brucella ovis ATCC 25840]
Length = 228
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 22/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 38 PTFTWNGAYLGGQIGYAWGKSHFSYDPTDLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDG 97
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+++ + + G V +AGY+VD L Y GG A+
Sbjct: 98 DVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLR 155
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + E +K + +G G+DY ++ L YRY + +A
Sbjct: 156 NRGEFEGAGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA 210
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 211 -----VTNNFKTNDIRFGVAYKF 228
>gi|298292422|ref|YP_003694361.1| porin [Starkeya novella DSM 506]
gi|296928933|gb|ADH89742.1| porin [Starkeya novella DSM 506]
Length = 203
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 30/193 (15%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCH 109
W+G Y+G + + + I+ G++ G+N Q V G+
Sbjct: 39 FTWTGFYIGANAGYGFGEADFSGDIDGFIG--------GLQAGYNWQGAGSPLVLGVETD 90
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
A S+ + L +G V + GY+ D L+YG GGF S E + N
Sbjct: 91 FQYADVSSSVFSL----DYFGTVRARVGYAFDQFLVYGTGGFAYGAG---SYELLGLTND 143
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+N +G G +Y + + S+ Y Y+ + DV
Sbjct: 144 RNHF--------GWTVGAGAEYALGNNWSVKGEYLYLDMGEETYATFTGPRDVGLTSN-- 193
Query: 230 NAHIASLGINMHF 242
+ G+N F
Sbjct: 194 ---VIRAGVNYRF 203
>gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 210
Score = 88.7 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 63/197 (31%), Gaps = 28/197 (14%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG--IELGHNIQLEDFVFG 105
WSG Y+G D + G G G+N Q V+G
Sbjct: 40 APAINNWSGFYIGG----------AGDWNKGHFSRNGNGYGFGGEAFTGYNWQQGQIVYG 89
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ A DST L K + G V + GY + ++YG G S
Sbjct: 90 VEADLGYAGIDSTRNGLTAKNGVNGSVRGRLGYDFNPFMLYGTAGLAIGQNKLS------ 143
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D S ++K +G G + + +++ YRY + N D
Sbjct: 144 DDTSSDSKT-----AVGYTVGAGAETFITNNVTARLEYRYTDY-----GKKNFDLDSGNF 193
Query: 226 DRKGNAHIASLGINMHF 242
R + +GI + F
Sbjct: 194 SRGYDEQSVKVGIGVKF 210
>gi|116255059|ref|YP_770894.1| putative outer membrane protein precursor [Rhizobium leguminosarum
bv. viciae 3841]
gi|115259707|emb|CAK11704.1| putative outer membrane protein precursor [Rhizobium leguminosarum
bv. viciae 3841]
Length = 216
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 62/201 (30%), Gaps = 21/201 (10%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
Y W+G Y GLH +N+ +G ++G+N Q V
Sbjct: 35 PSYDAPGTFSWAGAYAGLHGGVAAPKF--------NPFNNDRAPAVGAQVGYNFQAGPGV 86
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
FG + ++ K + G KAG +D IYG G
Sbjct: 87 FGAELEGSYLNNEVRVPGGKVESRFRGAAKAKAGLGLDRTFIYGTAGVTTTEFEGRRPVF 146
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI--PHHIHSVNNSNAKSD 221
S K + + G G+++ +S Y Y+ N+ SD
Sbjct: 147 ----GSDKWKSGPESWKQGYLFGGGVEHAFPGGVSAKIEYNYVINNAVPTPSGGVNSGSD 202
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ N + GIN F
Sbjct: 203 L-------NDSVIKAGINFRF 216
>gi|218663696|ref|ZP_03519626.1| outer membrane protein [Rhizobium etli IE4771]
Length = 203
Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 67/193 (34%), Gaps = 24/193 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W G Y+G + + G+N Q V+G+
Sbjct: 35 PAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFTGYNWQAGQIVYGVESD 86
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ DD + ++ KY G V + GY ++ L+YG G + KV D S
Sbjct: 87 LGYSGDDVSSGGVENKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNI------KVSDDTS 140
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+K + +G G++ V +I+ YRY + + + R
Sbjct: 141 DESKTAY-----GYTVGAGVEAFVTNNITTRLEYRYTDYQSKDYDLDSGS-----FSRGY 190
Query: 230 NAHIASLGINMHF 242
+ + LGI + F
Sbjct: 191 DENSVKLGIGVKF 203
>gi|307944219|ref|ZP_07659560.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
gi|307772565|gb|EFO31785.1| 22 kDa outer membrane protein [Roseibium sp. TrichSKD4]
Length = 242
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 30/236 (12%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+S+ S A DL D E WSG Y G + ++
Sbjct: 30 TVSVAGLAPSYAADLPQAAPTY-----DTTYEPAPSGRFDWSGAYAGGSLGWVWSGFDTT 84
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYR----LKEKYFI 128
+ + G+ G+N + V G+ R +K
Sbjct: 85 SSPTGSFDHDTNGFSGGVHGGYNFAITPNIVAGVELDFQMTDLYENTVRNGVNVKTSSAW 144
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ GY++D L+YG G A + + ++ + D G G
Sbjct: 145 NSSARARLGYAMDRFLVYGTAGLAIADLS------INANGASE-----DTTALGWTAGAG 193
Query: 189 LDYMVNYDISLSASYRYIPHHIH--SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ ++ +++ Y Y ++ S ++D+ + G++ F
Sbjct: 194 VEGAISNNLTARVEYLYQDFGRESFTLGGSKYRADL-------DTSTVRFGLSYKF 242
>gi|225626662|ref|ZP_03784701.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|225618319|gb|EEH15362.1| Porin subfamily protein [Brucella ceti str. Cudo]
Length = 239
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 66/201 (32%), Gaps = 22/201 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH- 109
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 51 FTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDV 110
Query: 110 --------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+++ + + G V +AGY+VD L Y GG A+ +
Sbjct: 111 TYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLRNR 168
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ E +K + +G G+DY ++ L YRY + +A
Sbjct: 169 GEFEGTGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA-- 221
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 222 ---VTNNFKTNDIRFGVAYKF 239
>gi|86749831|ref|YP_486327.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572859|gb|ABD07416.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 243
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 78/198 (39%), Gaps = 20/198 (10%)
Query: 52 GIWSGNYVGLHIS-----RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
WSG Y+G + + ++ + + + + G ++G+N Q+ +VFG+
Sbjct: 41 YDWSGFYIGANGGWGTSRKSWDFYAPGALLLSEGSHDASGATAGGQVGYNWQMGSWVFGV 100
Query: 107 NCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
A + L K +G + GY+ ++ L+Y GG A V++
Sbjct: 101 EAQGNWADFKGSNVTLLGGLFDNHSKVEAFGLFTGRVGYAWNNALLYAKGG---AAVVND 157
Query: 160 SLEKVES-DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
E V D G+S +G GL+Y + S + Y ++ V +N
Sbjct: 158 KYEFVRRADGLVTGTASETRWGAS--VGAGLEYGFTPNWSFAVEYNHLFLDKKDVTFTN- 214
Query: 219 KSDVERVDRKGNAHIASL 236
+ VER+ + + A +
Sbjct: 215 -TAVERIKQDADIVTARI 231
>gi|13470446|ref|NP_102014.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14021187|dbj|BAB47800.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 221
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 82/235 (34%), Gaps = 24/235 (10%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEY-QDDEYGIWSGNYVGLHISRLYETHPLAD 74
+VV + L L +P AD V+ W+G Y GL + ++
Sbjct: 3 RLVVASAGLLAVLSVPAL-----AADPTVDVPMTAPGFDWTGYYAGLQAGYGWGQSDISG 57
Query: 75 TINRKTYNSLLPNG--LGIELGHNIQLEDFVFGINCHTTAAKDDST-----FYRLKEKYF 127
T S NG +G + Q + V G + + T
Sbjct: 58 TEGEPFSVSPDINGGFVGGHIAGLWQFDQAVIGAEADLNYSSVNGTAEAEPGNNFGTDIK 117
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+G V KAGY++D +L+YG+GG A +E+ S + LG
Sbjct: 118 WFGSVNAKAGYAMDRVLVYGIGGVAFA--------GIETSQSAGSAFSETRANVGWTLGA 169
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+DY + + A YRY + S SD D+ + + ++ F
Sbjct: 170 GVDYALTDKFVVGAQYRYYDFGSEHYDGS---SDFVGRDQDTKLNTVGINLSYKF 221
>gi|158425587|ref|YP_001526879.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
gi|158332476|dbj|BAF89961.1| putative outer-membrane immunogenic protein [Azorhizobium
caulinodans ORS 571]
Length = 202
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 68/191 (35%), Gaps = 31/191 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCHTT 111
W+G YVG +I + +S G++ G+N+Q+ V G+
Sbjct: 41 WTGFYVGGNIGYGW---------GSAGADSPKGFLGGLQAGYNLQMAGSPIVLGLETDFD 91
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A + Y G V +AG++ D +LIYG GF S S
Sbjct: 92 WAGMNDGNY----SQDYIGTVRARAGFAFDRVLIYGTAGFAYGKGSYQVFGLSNSQTS-- 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
LG G +Y ++ + S A Y Y+ + NS + V + +
Sbjct: 146 ---------YGWALGAGAEYAIDRNWSARAEYMYVD-----LGNSTYGTWVGPTNVSYDT 191
Query: 232 HIASLGINMHF 242
+ G+N F
Sbjct: 192 SVLRAGVNYRF 202
>gi|86747693|ref|YP_484189.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas
palustris HaA2]
gi|86570721|gb|ABD05278.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris HaA2]
Length = 661
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/240 (17%), Positives = 69/240 (28%), Gaps = 31/240 (12%)
Query: 14 FLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
+ +V + L LP+ + WSG YVG H +
Sbjct: 9 TMRPIVTTALMLGGLVLPQAASAADALKALPS----PAMDWSGFYVGAHAGYVRGHADAR 64
Query: 74 DTINRKTYNSLLPNG---LGIELGHNIQLEDFV-FGINCHTTA----------AKDDSTF 119
+ +G G + G+NI V FG+ + ++ D+
Sbjct: 65 LQDPTFAASQSSGSGGVTAGAQAGYNILTRAGVLFGVEADISFPSYLPANAVLSEFDNAT 124
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
++ YG + + G + L Y GG + + G+
Sbjct: 125 STAQQHIDFYGTLRARLGVAAGRWLGYVTGGLAYEHERYLTEP---------GAGKVLNG 175
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G GL+Y + S Y Y SV R D N +G+N
Sbjct: 176 RIGWAAGAGLEYGFTPNWSARIEYLYSDFGNASVGLPTGA----RYDTAMNLQTVRIGVN 231
>gi|220979417|gb|ACL97990.1| outer membrane protein B3 [Rhizobium leguminosarum bv. viciae]
Length = 216
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/232 (18%), Positives = 75/232 (32%), Gaps = 24/232 (10%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
F V +S+++ + A DL + + Y W+G Y GLH
Sbjct: 9 FSVGVSMLMACGASAADL-------ADHSVPSAPSYDAPGTFSWAGAYAGLHGGVAASKF 61
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
+N+ +G ++G+N Q VFG + ++ + G
Sbjct: 62 --------NPFNNGRAPAVGAQVGYNFQAGSGVFGAELEGSYLNNEVRVPVGNVESRFRG 113
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
KAG D +YG G L S K D + G G++
Sbjct: 114 AAKAKAGLGFDRTFVYGTAGVTTTEFEGHRLV----SGSDKWKSGPDSWKHGYLFGGGVE 169
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +S Y Y+ ++ + S N ++ G+N F
Sbjct: 170 HAFSGGVSAKIEYNYVINNAVPTTSGGISS-----RSDLNDNVIEAGLNFRF 216
>gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 212
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 87/234 (37%), Gaps = 30/234 (12%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
+ +++ + A + + + + N+ WSGNY+G I P
Sbjct: 6 ITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVASGPH--DWSGNYIGAQIGASSSKVP 63
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-STFYRLKEKYFIYG 130
NR G+ +G N+Q + VFG A+ + + + G
Sbjct: 64 -GPFTNRTGALG------GVVVGKNMQSGNVVFGAELEGNFAEAEHRIGHGGSLQQSWNG 116
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY+ D L+YG G+G DN+ +A G ++G G++
Sbjct: 117 NAKGKVGYAFDKTLVYGTAGYGVT-------RFKAKDNTTSA----PGWEGGALIGAGVE 165
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA--HIASLGINMHF 242
+ +S+ A Y + S+ KS V V+++ N H G+N F
Sbjct: 166 QALTGPLSVKAEYDFQRF-------SDVKSRVNGVEQRNNLKNHSIKAGLNYKF 212
>gi|294851523|ref|ZP_06792196.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|294820112|gb|EFG37111.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 237
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 65/203 (32%), Gaps = 22/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 47 PTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDG 106
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+++ + G V +AGY+VD L Y GG A+
Sbjct: 107 DVTYNDVSKNIDFLDENNAAATFENHLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLR 164
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + E +K + +G G+DY ++ L YRY + +A
Sbjct: 165 NRGEFEGTGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA 219
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 220 -----VTNNFKTNDIRFGVAYKF 237
>gi|17988112|ref|NP_540746.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501033|ref|NP_697160.1| outer membrane protein [Brucella suis 1330]
gi|62289100|ref|YP_220893.1| hypothetical protein BruAb1_0116 [Brucella abortus bv. 1 str.
9-941]
gi|82699038|ref|YP_413612.1| outer membrane protein [Brucella melitensis biovar Abortus 2308]
gi|161618107|ref|YP_001591994.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163842394|ref|YP_001626798.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189023375|ref|YP_001934143.1| outer membrane protein [Brucella abortus S19]
gi|225851659|ref|YP_002731892.1| outer membrane protein [Brucella melitensis ATCC 23457]
gi|254690429|ref|ZP_05153683.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|254694917|ref|ZP_05156745.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|254696123|ref|ZP_05157951.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700932|ref|ZP_05162760.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|254705300|ref|ZP_05167128.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|254707183|ref|ZP_05169011.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|254709272|ref|ZP_05171083.1| outer membrane protein [Brucella pinnipedialis B2/94]
gi|254713305|ref|ZP_05175116.1| outer membrane protein [Brucella ceti M644/93/1]
gi|254716341|ref|ZP_05178152.1| outer membrane protein [Brucella ceti M13/05/1]
gi|254731460|ref|ZP_05190038.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|256030795|ref|ZP_05444409.1| outer membrane protein [Brucella pinnipedialis M292/94/1]
gi|256045911|ref|ZP_05448785.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112625|ref|ZP_05453546.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|256158816|ref|ZP_05456677.1| outer membrane protein [Brucella ceti M490/95/1]
gi|256254201|ref|ZP_05459737.1| outer membrane protein [Brucella ceti B1/94]
gi|256258681|ref|ZP_05464217.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|256264830|ref|ZP_05467362.1| Omp25c [Brucella melitensis bv. 2 str. 63/9]
gi|260546397|ref|ZP_05822137.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563196|ref|ZP_05833682.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567237|ref|ZP_05837707.1| Omp25c [Brucella suis bv. 4 str. 40]
gi|260755976|ref|ZP_05868324.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260759200|ref|ZP_05871548.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260760488|ref|ZP_05872834.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884997|ref|ZP_05896611.1| Omp25c [Brucella abortus bv. 9 str. C68]
gi|261215251|ref|ZP_05929532.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|261218122|ref|ZP_05932403.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221349|ref|ZP_05935630.1| Omp25c [Brucella ceti B1/94]
gi|261314664|ref|ZP_05953861.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316778|ref|ZP_05955975.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321031|ref|ZP_05960228.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751447|ref|ZP_05995156.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261756010|ref|ZP_05999719.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|265987849|ref|ZP_06100406.1| Omp25c [Brucella pinnipedialis M292/94/1]
gi|265992323|ref|ZP_06104880.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1]
gi|265994065|ref|ZP_06106622.1| Omp25c [Brucella melitensis bv. 3 str. Ether]
gi|265997309|ref|ZP_06109866.1| Omp25c [Brucella ceti M490/95/1]
gi|297247516|ref|ZP_06931234.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|17983866|gb|AAL53010.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23346897|gb|AAN29075.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251229|gb|AAS84585.1| Omp25c [Brucella abortus]
gi|46251233|gb|AAS84587.1| Omp25c [Brucella canis]
gi|46251237|gb|AAS84589.1| Omp25c [Brucella pinnipedialis]
gi|46251239|gb|AAS84590.1| Omp25c [Brucella ceti]
gi|46251241|gb|AAS84591.1| Omp25c [Brucella ceti]
gi|46251243|gb|AAS84592.1| Omp25c [Brucella ceti]
gi|62195232|gb|AAX73532.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615139|emb|CAJ10072.1| outer membrane protein, putative [Brucella melitensis biovar
Abortus 2308]
gi|161334918|gb|ABX61223.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163673117|gb|ABY37228.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189018947|gb|ACD71669.1| outer membrane protein, putative [Brucella abortus S19]
gi|225640024|gb|ACN99937.1| outer membrane protein [Brucella melitensis ATCC 23457]
gi|260096504|gb|EEW80380.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153212|gb|EEW88304.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156755|gb|EEW91835.1| Omp25c [Brucella suis bv. 4 str. 40]
gi|260669518|gb|EEX56458.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260670923|gb|EEX57744.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260676084|gb|EEX62905.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260874525|gb|EEX81594.1| Omp25c [Brucella abortus bv. 9 str. C68]
gi|260916858|gb|EEX83719.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260919933|gb|EEX86586.1| Omp25c [Brucella ceti B1/94]
gi|260923211|gb|EEX89779.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293721|gb|EEX97217.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296001|gb|EEX99497.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303690|gb|EEY07187.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261741200|gb|EEY29126.1| outer membrane protein [Brucella suis bv. 5 str. 513]
gi|261745763|gb|EEY33689.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|262551777|gb|EEZ07767.1| Omp25c [Brucella ceti M490/95/1]
gi|262765046|gb|EEZ10967.1| Omp25c [Brucella melitensis bv. 3 str. Ether]
gi|263003389|gb|EEZ15682.1| Omp25c [Brucella melitensis bv. 1 str. Rev.1]
gi|263095286|gb|EEZ18913.1| Omp25c [Brucella melitensis bv. 2 str. 63/9]
gi|264660046|gb|EEZ30307.1| Omp25c [Brucella pinnipedialis M292/94/1]
gi|289467873|gb|ADC95621.1| 25kDa outer membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. M5]
gi|297174685|gb|EFH34032.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|326408139|gb|ADZ65204.1| outer membrane protein, putative [Brucella melitensis M28]
gi|326537850|gb|ADZ86065.1| outer membrane protein [Brucella melitensis M5-90]
Length = 228
Score = 87.9 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 22/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 38 PTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDG 97
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+++ + + G V +AGY+VD L Y GG A+
Sbjct: 98 DVTYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLR 155
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + E +K + +G G+DY ++ L YRY + +A
Sbjct: 156 NRGEFEGTGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA 210
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 211 -----VTNNFKTNDIRFGVAYKF 228
>gi|39933549|ref|NP_945825.1| OmpA-like transmembrane domain-containing protein [Rhodopseudomonas
palustris CGA009]
gi|39647395|emb|CAE25916.1| OmpA-like transmembrane domain [Rhodopseudomonas palustris CGA009]
Length = 736
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 65/205 (31%), Gaps = 27/205 (13%)
Query: 49 DEYGIWSGNYVGLHIS--RLYETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLE-DFVF 104
D WSG YVG H R + L D + + N G + G+N + +
Sbjct: 112 DPAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLL 171
Query: 105 GINCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
G+ + ++ D+ + YG V + G L Y GG
Sbjct: 172 GVEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGVIAGRWLGYVTGGLAFE 231
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + V GR G G++Y + S Y Y + +V+
Sbjct: 232 HERYLTDPDV---------GRVMNARIGWAAGAGVEYGFTPNWSARVEYLYSQYQNATVD 282
Query: 215 NSNAKSDVERVDRKGNAHIASLGIN 239
S ++ + +G+N
Sbjct: 283 LPTGASYATSLNLQ----TVRVGVN 303
>gi|260460927|ref|ZP_05809177.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259033504|gb|EEW34765.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 255
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 64/193 (33%), Gaps = 27/193 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLAD--TINRKTYNSLLPNGL------------GIELGHN 96
WSG YVG HI D N + L+P G GI G
Sbjct: 37 AYDWSGFYVGGHIGVADGDITATDMTEPNGGFFTELVPAGTEGFDFNKAGVAGGIHAGAQ 96
Query: 97 IQLEDFVFGINCHTTAAKDDSTFY--------RLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
Q FV G TA T K Y +V + GY+ D +LIY
Sbjct: 97 WQWGQFVLGGEATWTATGIRKTITSPYYPDSDTETGKISNYATIVGRVGYAFDRVLIYAK 156
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G+ G V + DN + + LG G+DY + ++SL Y +I
Sbjct: 157 AGYAGGKV-----DFRARDNDALVSYEKNEWQNGYALGAGIDYALTNNLSLGVDYTHIDL 211
Query: 209 HIHSVNNSNAKSD 221
+ N D
Sbjct: 212 GHKTSTGDNVYDD 224
>gi|323138001|ref|ZP_08073075.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
gi|322396720|gb|EFX99247.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
Length = 702
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 37/225 (16%)
Query: 52 GIWSGNYVGLHISRLYETH-------------PLADTINRKTYNSLLPNGLGIELGHNIQ 98
W G Y+G + + H P+ D + +G ++G+N Q
Sbjct: 26 FNWVGMYLGASLGAAFPLHGGERLQAGSGFGSPVYDLYPAGATRPGVT--VGAQVGYNWQ 83
Query: 99 LEDFVFGINCHTT-----------AAKDDS--------TFYRLKEKYFIYGDVVLKAGYS 139
+V+G + A D+ T + + + + + G++
Sbjct: 84 DGPWVWGFETDLSLLDGRRGPNGLFASSDAYAPGLPVYTLHPGSSANY-FASIRGRVGFA 142
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN--AKGRFDGHGSSVVLGIGLDYMVNYDI 197
D L+Y GG + +D V G G +Y +
Sbjct: 143 YDRALLYLTGGVAAGGARGPETLTLGADGPDAIFEAPWSQSSRMKYVFGAGFEYAFADNW 202
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S A Y ++ +++ N + + I G+N HF
Sbjct: 203 SARAEYLFLNQSLNTQTFDNGAGYLYASRIRNENQILRFGLNYHF 247
>gi|91975321|ref|YP_567980.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91681777|gb|ABE38079.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 242
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 65/205 (31%), Gaps = 24/205 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G HI + T NS G++ G++ Q +V G+
Sbjct: 40 PIYNWTGFYIGGHIGGAFAGD--NSIGTGVTANSDGKFLGGVQAGYDWQFAPSWVLGVEG 97
Query: 109 H---TTAAKDDSTF--------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ + D F Y + V + GY+ L+Y GG+ AY
Sbjct: 98 QYSWLSGSNDAVAFTVVGQPGTYTFSDNQRGLASVTGRLGYTWGPALLYVKGGW--AYAD 155
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
S + +G GL+Y+ + S Y+Y +
Sbjct: 156 YKSSLTFTAPGGAAVGVSSTSSQDGYTVGAGLEYLFAQNWSGKIEYQYYDFGNVDLGA-- 213
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
K + H+ G+N F
Sbjct: 214 ------GFTAKNDQHVVKAGLNYRF 232
>gi|146341076|ref|YP_001206124.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193882|emb|CAL77899.1| putative outer-membrane protein precursor [Bradyrhizobium sp.
ORS278]
Length = 237
Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 18/205 (8%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L + +V+ + +LA DL R Y WSG Y+G + +
Sbjct: 4 LLLMTTALVVLASPTLAADL-AARPYTKAPAPMMAAIY------DWSGFYIGANGGGGWS 56
Query: 69 THPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINC-----HTTAAKDDSTFY-R 121
+ + + G +G + G+ Q+ VFG+ T + F R
Sbjct: 57 HNTWDLVGGGREGSHDSSGGTIGGQFGYRWQMGPVVFGVEAQGNWADFTGDNVSALFATR 116
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ K +G + GY+ +++L+Y GG S+ + + +
Sbjct: 117 NRTKTDAFGLFTGQVGYAFNNVLLYAKGGAAVT----SNKYTITNAVTGAFLASNTDSRW 172
Query: 182 SVVLGIGLDYMVNYDISLSASYRYI 206
V+G GL+Y + S+ Y ++
Sbjct: 173 GGVVGAGLEYGFAPNWSVGVEYDHL 197
>gi|323136250|ref|ZP_08071332.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
gi|322398324|gb|EFY00844.1| outer membrane protein Omp31 precursor [Methylocystis sp. ATCC
49242]
Length = 226
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 34/208 (16%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGIN 107
+WSG YVG+H + + + L +G+ G+N + F+ G+
Sbjct: 39 PPAFVWSGFYVGVHGGYAFSSFEDDANTLIGGADGGL---IGVTGGYNYMVTPQFLLGVE 95
Query: 108 CHTTAAKDDSTFYRL-----KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ + + + +AGYS+D L+Y GGF +
Sbjct: 96 ADFAFTGVSKSNAPFFGVIARGEVDDMFTLRGRAGYSIDRALLYVTGGFAASKNAIGLTT 155
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY--------RYIPHHIHSVN 214
A LG G++YM+ ++S Y Y +++
Sbjct: 156 PFTGFYGYQAT-----FQPGWALGAGVEYMITSNLSAKGEYIFTSTGSDSYFDFSPNALT 210
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
++ S ++ G+N HF
Sbjct: 211 SAVNTSSIKG------------GLNFHF 226
>gi|225851658|ref|YP_002731891.1| porin [Brucella melitensis ATCC 23457]
gi|256264831|ref|ZP_05467363.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|225640023|gb|ACN99936.1| porin [Brucella melitensis ATCC 23457]
gi|263095287|gb|EEZ18914.1| Omp25d [Brucella melitensis bv. 2 str. 63/9]
gi|326408138|gb|ADZ65203.1| porin [Brucella melitensis M28]
gi|326537849|gb|ADZ86064.1| porin [Brucella melitensis M5-90]
Length = 230
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 26/206 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y G + + L + N T + PNG G+ G+N + F+ G+
Sbjct: 38 PSFSWAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNHFILGL 96
Query: 107 NCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ + + + G V +AGY++D + Y GG A+
Sbjct: 97 DANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGV--AFG 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++ + S +K + + +G G+DY ++ L YRY +
Sbjct: 155 GIKNSLRIGGEESSKSKTQ-----TGWTVGAGIDYAATDNVLLRLEYRYTDY-----GKK 204
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
N + + LG+ F
Sbjct: 205 NFGLNDLDTRGSFKTNDIRLGVAYKF 230
>gi|86749266|ref|YP_485762.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572294|gb|ABD06851.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 274
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 20/179 (11%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY-----------RLK 123
+ Y++ G+ +G+N Q VFG+ A + T
Sbjct: 95 FFGSQKYDTSGGFAGGV-VGYNWQSGAVVFGLEGDYHWADINGTSSVINVGPPNLGDTYS 153
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K +GD+ + GY+ L + GG + + ++ K ++
Sbjct: 154 TKLRGFGDIKGRLGYAAGPALWFVSGGAAVGDL-QHRYDGGAANTFVQNKTKW-----GY 207
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G G++YM S Y YI ++ + A ++ R + K H +GIN HF
Sbjct: 208 TVGAGVEYMFAPSWSAKLEYNYIDLGRSTIQYTAAPTN--RSEWKDTFHTVKVGINYHF 264
>gi|91977701|ref|YP_570360.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91684157|gb|ABE40459.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 237
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 19/196 (9%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
W+G Y+G ++ + + + G++ G + Q +V G+ +
Sbjct: 44 WTGFYIGGNVGGAFAG-------SNNIQSDAGRFMGGVQGGFDYQFAPNWVVGLEAQYSW 96
Query: 113 AKDDSTFYRL------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
++T E G V + GYS L+Y GG+ DSSL +
Sbjct: 97 MASNNTGVLFPLGSVATENTRGLGSVTGRLGYSWGPALLYAKGGYAF---RDSSLGVNTA 153
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
++A +G GL+YM S Y+Y S +DV
Sbjct: 154 AGVQSAYTTSGNRNDGYTVGAGLEYMFAPSWSAKVEYQYYKFDNTSFTG--GPADVVGTT 211
Query: 227 RKGNAHIASLGINMHF 242
+ + H GIN F
Sbjct: 212 FRNDDHTVKAGINYRF 227
>gi|256060263|ref|ZP_05450438.1| outer membrane protein [Brucella neotomae 5K33]
gi|261324236|ref|ZP_05963433.1| Omp25c [Brucella neotomae 5K33]
gi|46251235|gb|AAS84588.1| Omp25c [Brucella neotomae]
gi|261300216|gb|EEY03713.1| Omp25c [Brucella neotomae 5K33]
Length = 228
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 31/245 (12%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
AL F + +V + A D + ++ A W+G Y+G I +
Sbjct: 5 ALLFASTVVLVAATGTNAADAVIEQEPAPVVVA---------PTFTWNGAYLGGQIGYAW 55
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH---------TTAAKDDS 117
+ G+ G+N L + V GI+ +++
Sbjct: 56 GKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFLDENN 115
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ + G V +AGY+VD L Y GG A+ + + E +K
Sbjct: 116 AAATFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLRNRGEFEGTGFSQSKT--- 170
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ +G G+DY ++ L YRY + +A V + G
Sbjct: 171 --LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA-----VTNNFKTNDIRFG 223
Query: 238 INMHF 242
+ F
Sbjct: 224 VAYKF 228
>gi|256368583|ref|YP_003106089.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915]
gi|255998741|gb|ACU47140.1| 25Kda outer membrane protein precursor [Brucella microti CCM 4915]
Length = 228
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 22/203 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 38 PTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDG 97
Query: 109 H---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+++ + + G V +AGY+VD L Y GG A+
Sbjct: 98 DVTYNDVSKNIDFLDENNAAAAFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLR 155
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + E +K + +G G+DY ++ L YRY + +A
Sbjct: 156 NRGEFEGTGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA 210
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 211 -----VTNNFKTNDIRFGVAYKF 228
>gi|323137911|ref|ZP_08072986.1| porin [Methylocystis sp. ATCC 49242]
gi|322396914|gb|EFX99440.1| porin [Methylocystis sp. ATCC 49242]
Length = 259
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKD-----DSTFY 120
++ + N T +G E G+ Q +FV G + A +S F
Sbjct: 66 WDFGAVPAVWNVNTSRGTSGYLVGYESGYTWQFSNNFVLGYESEFSYADVRSNNTNSWFG 125
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ + +G L+ GY+ +L Y GG V S + +
Sbjct: 126 GVSNRLEWFGAERLRFGYAFGRILPYVTGGLAYGRVKASGTDSIGGFLFPTNAST---WQ 182
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGIN 239
+ +G GL+Y S+ A Y Y S + D +G + H+A +G+N
Sbjct: 183 AGWTVGAGLEYAFWDKFSIKAEYLYTSMKGPSGTGLAFPNGFRTFDGRGFDTHLARVGLN 242
Query: 240 MH 241
+
Sbjct: 243 YN 244
>gi|256060262|ref|ZP_05450437.1| outer membrane protein, putative [Brucella neotomae 5K33]
gi|261324235|ref|ZP_05963432.1| Omp25d [Brucella neotomae 5K33]
gi|46251251|gb|AAS84596.1| Omp25d [Brucella neotomae]
gi|261300215|gb|EEY03712.1| Omp25d [Brucella neotomae 5K33]
Length = 230
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 26/206 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y G + + L + N T + PNG G+ G+N + F+ G+
Sbjct: 38 PSFSWAGAYFGGQVGYGWGRAKLENRTNGST-SEFKPNGFIGGLYTGYNFDTGNNFILGL 96
Query: 107 NCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ + + + G V +AGY++D + Y GG A+
Sbjct: 97 DANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGV--AFG 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++ + S +K + + +G G+DY ++ L YRY +
Sbjct: 155 GIKNSLRIGGEESSKSKTQ-----TGWTVGAGIDYAATDNVLLRLEYRYTDY-----GKK 204
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
N + + LG+ F
Sbjct: 205 NFGLNDLDTRGSFKTNDIRLGVAYKF 230
>gi|17988113|ref|NP_540747.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23501032|ref|NP_697159.1| outer membrane protein [Brucella suis 1330]
gi|62289099|ref|YP_220892.1| hypothetical protein BruAb1_0115 [Brucella abortus bv. 1 str.
9-941]
gi|82699037|ref|YP_413611.1| outer membrane protein [Brucella melitensis biovar Abortus 2308]
gi|148559864|ref|YP_001258156.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161618106|ref|YP_001591993.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163842393|ref|YP_001626797.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189023374|ref|YP_001934142.1| outer membrane protein [Brucella abortus S19]
gi|225626661|ref|ZP_03784700.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237814591|ref|ZP_04593589.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|254690428|ref|ZP_05153682.1| outer membrane protein, putative [Brucella abortus bv. 6 str. 870]
gi|254694916|ref|ZP_05156744.1| outer membrane protein, putative [Brucella abortus bv. 3 str.
Tulya]
gi|254707184|ref|ZP_05169012.1| outer membrane protein, putative [Brucella pinnipedialis
M163/99/10]
gi|254709271|ref|ZP_05171082.1| outer membrane protein, putative [Brucella pinnipedialis B2/94]
gi|254713306|ref|ZP_05175117.1| outer membrane protein, putative [Brucella ceti M644/93/1]
gi|254716340|ref|ZP_05178151.1| outer membrane protein, putative [Brucella ceti M13/05/1]
gi|254731459|ref|ZP_05190037.1| outer membrane protein, putative [Brucella abortus bv. 4 str. 292]
gi|256030794|ref|ZP_05444408.1| outer membrane protein, putative [Brucella pinnipedialis M292/94/1]
gi|256045910|ref|ZP_05448784.1| outer membrane protein, putative [Brucella melitensis bv. 1 str.
Rev.1]
gi|256112624|ref|ZP_05453545.1| outer membrane protein, putative [Brucella melitensis bv. 3 str.
Ether]
gi|256158815|ref|ZP_05456676.1| outer membrane protein, putative [Brucella ceti M490/95/1]
gi|256254200|ref|ZP_05459736.1| outer membrane protein, putative [Brucella ceti B1/94]
gi|256258680|ref|ZP_05464216.1| outer membrane protein, putative [Brucella abortus bv. 9 str. C68]
gi|256368582|ref|YP_003106088.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260169698|ref|ZP_05756509.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella sp.
F5/99]
gi|260546396|ref|ZP_05822136.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563195|ref|ZP_05833681.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260567238|ref|ZP_05837708.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260755975|ref|ZP_05868323.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260759199|ref|ZP_05871547.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260884996|ref|ZP_05896610.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|261215250|ref|ZP_05929531.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|261218121|ref|ZP_05932402.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221348|ref|ZP_05935629.1| Omp25d [Brucella ceti B1/94]
gi|261314665|ref|ZP_05953862.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316777|ref|ZP_05955974.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321032|ref|ZP_05960229.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261759234|ref|ZP_06002943.1| outer membrane protein [Brucella sp. F5/99]
gi|265987848|ref|ZP_06100405.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|265992322|ref|ZP_06104879.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|265994064|ref|ZP_06106621.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|265997308|ref|ZP_06109865.1| Omp25d [Brucella ceti M490/95/1]
gi|297247515|ref|ZP_06931233.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
gi|17983867|gb|AAL53011.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|23346896|gb|AAN29074.1| outer membrane protein, putative [Brucella suis 1330]
gi|46251245|gb|AAS84593.1| Omp25d [Brucella abortus]
gi|46251247|gb|AAS84594.1| Omp25d [Brucella ovis]
gi|46251249|gb|AAS84595.1| Omp25d [Brucella canis]
gi|46251253|gb|AAS84597.1| Omp25d [Brucella ceti]
gi|46251255|gb|AAS84598.1| Omp25d [Brucella ceti]
gi|46251257|gb|AAS84599.1| Omp25d [Brucella ceti]
gi|46251259|gb|AAS84600.1| Omp25d [Brucella pinnipedialis]
gi|62195231|gb|AAX73531.1| outer membrane protein, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82615138|emb|CAJ10071.1| outer membrane protein, putative [Brucella melitensis biovar
Abortus 2308]
gi|148371121|gb|ABQ61100.1| putative outer membrane protein [Brucella ovis ATCC 25840]
gi|161334917|gb|ABX61222.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|163673116|gb|ABY37227.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|189018946|gb|ACD71668.1| outer membrane protein, putative [Brucella abortus S19]
gi|225618318|gb|EEH15361.1| Porin subfamily protein [Brucella ceti str. Cudo]
gi|237789428|gb|EEP63638.1| Porin subfamily protein [Brucella abortus str. 2308 A]
gi|255998740|gb|ACU47139.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
microti CCM 4915]
gi|260096503|gb|EEW80379.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153211|gb|EEW88303.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260156756|gb|EEW91836.1| Omp25d [Brucella suis bv. 4 str. 40]
gi|260669517|gb|EEX56457.1| outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|260676083|gb|EEX62904.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260874524|gb|EEX81593.1| Omp25d [Brucella abortus bv. 9 str. C68]
gi|260916857|gb|EEX83718.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260919932|gb|EEX86585.1| Omp25d [Brucella ceti B1/94]
gi|260923210|gb|EEX89778.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293722|gb|EEX97218.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296000|gb|EEX99496.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303691|gb|EEY07188.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739218|gb|EEY27214.1| outer membrane protein [Brucella sp. F5/99]
gi|262551776|gb|EEZ07766.1| Omp25d [Brucella ceti M490/95/1]
gi|262765045|gb|EEZ10966.1| Omp25d [Brucella melitensis bv. 3 str. Ether]
gi|263003388|gb|EEZ15681.1| Omp25d [Brucella melitensis bv. 1 str. Rev.1]
gi|264660045|gb|EEZ30306.1| Omp25d [Brucella pinnipedialis M292/94/1]
gi|297174684|gb|EFH34031.1| 22 kDa outer membrane protein precursor [Brucella abortus bv. 5
str. B3196]
Length = 230
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 26/206 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y G + + L + N T + PNG G+ G+N + F+ G+
Sbjct: 38 PSFSWAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGL 96
Query: 107 NCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ + + + G V +AGY++D + Y GG A+
Sbjct: 97 DANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGV--AFG 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++ + S +K + + +G G+DY ++ L YRY +
Sbjct: 155 GIKNSLRIGGEESSKSKTQ-----TGWTVGAGIDYAATDNVLLRLEYRYTDY-----GKK 204
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
N + + LG+ F
Sbjct: 205 NFGLNDLDTRGSFKTNDIRLGVAYKF 230
>gi|260460749|ref|ZP_05808999.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
gi|259033326|gb|EEW34587.1| outer membrane protein [Mesorhizobium opportunistum WSM2075]
Length = 221
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 18/200 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGIN 107
W+G Y G+ + ++ T S G +G + Q + V G
Sbjct: 33 PGFDWTGYYAGMQAGYGWGQSDISGTGGGPFSVSPDIGGGFVGGHVAGLWQFDQAVIGAE 92
Query: 108 CHTTAAKDDST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ D T L +G V KAGY+VD +L+YG+GG A
Sbjct: 93 ADLNYSSVDGTADLGAGNTLGTDVKWFGSVNAKAGYAVDRVLVYGIGGVAFA-------- 144
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+E+ S A +G G+DY + + A YRY + SN +D
Sbjct: 145 GIETSQSAGAAFSETRTNVGWTVGAGVDYALTDKFVVGAQYRYYDFGSEHFDGSNGFAD- 203
Query: 223 ERVDRKGNAHIASLGINMHF 242
D+ + + ++ F
Sbjct: 204 --RDQDTKLNTVGVNLSYKF 221
>gi|306844393|ref|ZP_07476983.1| outer membrane protein [Brucella sp. BO1]
gi|306275206|gb|EFM56956.1| outer membrane protein [Brucella sp. BO1]
Length = 227
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/244 (19%), Positives = 80/244 (32%), Gaps = 30/244 (12%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
AL F + +V + A D + ++ A W+G Y+G I +
Sbjct: 5 ALLFASTVVLVATTGANAADAVIEQEPAPVVVA---------PTFTWNGAYLGGQIGYAW 55
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK--------DDST 118
+ G+ G+N L + V GI+ T D +
Sbjct: 56 GKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDVTYNDVSKNIDFLDGND 115
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ + G V +AGY+VD L Y GG A+ + + E + +K
Sbjct: 116 AGSFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLRNRGEFEDASFSQSKT---- 169
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ +G G+DY ++ L YRY + +A V + G+
Sbjct: 170 -LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA-----VTNNFKTNDIRFGV 223
Query: 239 NMHF 242
F
Sbjct: 224 AYKF 227
>gi|75674930|ref|YP_317351.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419800|gb|ABA03999.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 209
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 45/234 (19%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
++ +++V + + PR Y W+G Y+G HI +
Sbjct: 5 LLITAAVLVSVPAASAADLAPRPYTK------APPYVPAPIYNWTGFYLGGHIGGAFSNG 58
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIY 129
+ G++ G ++Q +VFG+ + L
Sbjct: 59 RDGVFLG------------GVQSGWDLQFAPNWVFGLEGSYSFLDSGIAGANLG-----L 101
Query: 130 GDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G + GY+ L Y GG+G A + ++ + N +G G
Sbjct: 102 GSATARLGYTWGGPALFYVKGGYGTAVLRGNNAIFGINPNIG---------LDGYTVGAG 152
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+YM + + Y+Y + + + H +G+N F
Sbjct: 153 LEYMFTQNWAGKVEYQYFDFG-----------RIAGTNINLDTHTVKVGLNYRF 195
>gi|319784137|ref|YP_004143613.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170025|gb|ADV13563.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 255
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 64/193 (33%), Gaps = 27/193 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLAD--TINRKTYNSLLPNGL------------GIELGHN 96
WSG YVG H+ D N + L+P G GI G
Sbjct: 37 AYDWSGLYVGGHLGVANGDITATDMTEPNGGFFTDLVPAGTEGFDFNKAGVAGGIHAGAQ 96
Query: 97 IQLEDFVFGINCHTTAAKDDSTFY--------RLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
Q F+ G TA T K Y VV + GY+ D +LIY
Sbjct: 97 WQWGQFILGGEATWTATGIRKTITSPYFPDSDTETAKISNYATVVGRVGYAFDRVLIYAK 156
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G+ G V + DN + + LG G+DY + ++SL Y ++
Sbjct: 157 AGYAGGKV-----DFRARDNDALVTYEKNEWQNGYALGAGIDYALTNNLSLGVDYTHVDL 211
Query: 209 HIHSVNNSNAKSD 221
+ N D
Sbjct: 212 GHKTSTGDNVFDD 224
>gi|296447421|ref|ZP_06889346.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296255041|gb|EFH02143.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 271
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 72/221 (32%), Gaps = 29/221 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTY----------NSLLPNGLGIELGHNIQL 99
W+G Y GL+I + +++ G ++G+N Q
Sbjct: 38 PAFTWTGVYAGLNIGYGWSEKQSIAGTVSAAGTPIAFWSFPSSAVDGVLGGGQIGYNRQF 97
Query: 100 E--DFVFGINCHTTAAKDD--------------STFYRLKEKYFIYGDVVLKAGYSVD-S 142
FV G+ A + + F +++ +G V + GY+V +
Sbjct: 98 AGTSFVVGLEADFRGAGVNGYSNGFGPTNQFGYTPFVNARQQLDWFGTVRGRLGYAVAPT 157
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
LL+YG GGF + + D + G G+++ S
Sbjct: 158 LLVYGTGGFAYGGYRATYSGGAVGVPVTVSVSNSD-VRTGWTAGGGVEWAFLPRWSAKVE 216
Query: 203 YRYIP-HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y H + + +V + H S G+N HF
Sbjct: 217 YLYTELERGHDASYALLGLVANQVGVQNRFHTISAGVNYHF 257
>gi|39933934|ref|NP_946210.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39647781|emb|CAE26301.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 244
Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 27/209 (12%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
Y W+G Y+G HI + T + G++ G++ Q +
Sbjct: 43 PAYAPAPVYNWTGFYIGGHIGGAFSGD--NSIGTGVTASDNGKFLGGVQAGYDWQFAPNW 100
Query: 103 VFGINC---------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
V G+ + + + + V + GY+ L+Y GG+
Sbjct: 101 VLGVEGQYSWLSGTNSSVSWGAPGAVFTYSDNQRGLASVTGRLGYTWGPALLYVKGGWAY 160
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A + S N D +G GL+Y+ + S Y+Y ++
Sbjct: 161 A-------DYSSSLTFNNVGVAVDSKTDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNVTL 213
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
K + H+ G+N F
Sbjct: 214 --------APGFTAKNDEHVVKAGLNYRF 234
>gi|260169699|ref|ZP_05756510.1| outer membrane protein [Brucella sp. F5/99]
gi|261759235|ref|ZP_06002944.1| outer membrane protein [Brucella sp. F5/99]
gi|261739219|gb|EEY27215.1| outer membrane protein [Brucella sp. F5/99]
Length = 228
Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 66/201 (32%), Gaps = 22/201 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH- 109
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 40 FTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDGDV 99
Query: 110 --------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+++ + + G V +AGY+VD L Y GG A+ +
Sbjct: 100 TYNDVSKNIDFLDENNAAATFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLRNR 157
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ E +K + +G G+DY ++ L YRY + +A
Sbjct: 158 GEFEGTGFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA-- 210
Query: 222 VERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 211 ---VTNNFKTNDIRFGVAYKF 228
>gi|118591879|ref|ZP_01549274.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
gi|118435522|gb|EAV42168.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
Length = 223
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 60/195 (30%), Gaps = 21/195 (10%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTT 111
W+G YVG ++ + N G+ G+N Q+ V G +
Sbjct: 45 DWTGLYVGGNLGWAFGQFDNKAGNNTGLGVDANGIAGGLYTGYNFQVTPNIVVGAEADFS 104
Query: 112 AAKDDST----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + L+ K + + GY+ D L+YG GG A + S +S
Sbjct: 105 LTDLEKSKSNGGLTLRSKSDWNSNFRGRVGYAFDRYLVYGAGGLAIADLEVSGNGDTDSK 164
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
LG G + + +++ Y Y N + V
Sbjct: 165 T-----------ALGWTLGAGGEAAITNNVTAKLEYVYQDFGEQDFNLNG-----TGVSS 208
Query: 228 KGNAHIASLGINMHF 242
N +GI F
Sbjct: 209 DFNNSQVRMGIGYKF 223
>gi|92115908|ref|YP_575637.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
gi|91798802|gb|ABE61177.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
Length = 245
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 77/225 (34%), Gaps = 16/225 (7%)
Query: 19 VPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR 78
V +A + Y+ W+G Y+G H+ +
Sbjct: 26 VAIVGMAAIVPAQAADLAARPYTKAPVYEAAPIYNWTGFYLGGHVGGAFGGDHNLAAPGF 85
Query: 79 KTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG 137
+ G ++G++ Q +VFGI + + D+ + + G V + G
Sbjct: 86 TRNGNDGVFMGGGQIGYDYQFSPNWVFGIGANYSFL--DTNDHPFVNRG--LGSVTGRLG 141
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
Y+ L+Y GG+ A +++ D N + D +G GL+YM +
Sbjct: 142 YTWGPALLYAKGGYAWADTRNTN--GFGGDTFSNNRIGRD----GFTVGGGLEYMFTQNW 195
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S Y+Y N + V + + H +G+N F
Sbjct: 196 SGLIEYQYYDFGTTRTTFRN-----QDVRFRNDEHTIKVGLNYRF 235
>gi|12620578|gb|AAG60854.1|AF322012_159 ID352 [Bradyrhizobium japonicum]
Length = 620
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 21/174 (12%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY-----------FIYGDVVLKAGY 138
G ++G+N Q +V+G+ +AA + L ++ + GY
Sbjct: 132 GGQIGYNWQNNSWVYGLELDASAAVASGSNTCLAASDLIVSANCNAAPNLFATGTGRIGY 191
Query: 139 SVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
+ S L Y G + E + K FD V+G+G++ +
Sbjct: 192 AFGSLGQTLAYLKAGAAWQNNRGDIVNNFEGGDLPQEKTHFDYGQVGGVIGLGVEQALTP 251
Query: 196 DISLSASYRYIPHHIHSVNNSNAKS-------DVERVDRKGNAHIASLGINMHF 242
S++ Y Y+ SV ++ N HI +G+N HF
Sbjct: 252 SWSVNVEYDYLHFGGPSVATASTAKLSPSTILPASTTSLSSNYHIGKIGLNYHF 305
>gi|154246284|ref|YP_001417242.1| porin [Xanthobacter autotrophicus Py2]
gi|154160369|gb|ABS67585.1| porin [Xanthobacter autotrophicus Py2]
Length = 232
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 30/207 (14%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINR----KTYNSLLPNGL--GIELGHNIQL-EDFVF 104
W+G Y+G ++ + + T +Y+ NG G++ G+N Q + V
Sbjct: 40 FSWTGFYIGGNVGWGWADNTYDVTPFGSLIGYSYSPGTGNGFIGGLQTGYNYQFANNVVI 99
Query: 105 GINCHTTAAKDDS---------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
G+ + S T + + +G + + GY +D L Y GG A
Sbjct: 100 GVEADFDWSDIGSSSLVVGGPFTGGAISQNIDYFGTIRARLGYGIDRFLPYITGGAAWAK 159
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
S ++ +G G++Y + + ++ A Y Y+ + ++ N+
Sbjct: 160 QNFSDFYG----------NTYNDTKWGWTVGAGVEYAITNNWTVKAEYLYLGFNKNTTND 209
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
S N A LG+N F
Sbjct: 210 YFGDSYSVG----SNISTAKLGVNYKF 232
>gi|192289353|ref|YP_001989958.1| porin [Rhodopseudomonas palustris TIE-1]
gi|192283102|gb|ACE99482.1| porin [Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 66/213 (30%), Gaps = 26/213 (12%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
Y W+G Y+G HI + T + G++ G++ Q +
Sbjct: 33 PAYAPAPVYNWTGFYIGGHIGGAFSGD--NSIGTGVTASDNGKFLGGVQAGYDWQFAPNW 90
Query: 103 VFGINCH---TTAAKDDSTFY----------RLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
V G+ + F + V + GY+ L+Y G
Sbjct: 91 VLGVEGQYSWLSGTNQSVAFGGTLNGAPGVFTYADNQRGLASVTGRLGYTWGPALLYVKG 150
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G+ AY SS + A D +G GL+Y+ + S Y+Y
Sbjct: 151 GW--AYADYSSSLTFVPNAGGFAAVAIDSKKDGYTVGGGLEYLFAPNWSGKIEYQYYDFG 208
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N K + H+ G+N F
Sbjct: 209 NVDLGN--------GFSAKNDEHVVKAGLNYRF 233
>gi|27380404|ref|NP_771933.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27353568|dbj|BAC50558.1| bll5293 [Bradyrhizobium japonicum USDA 110]
Length = 277
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 74/237 (31%), Gaps = 46/237 (19%)
Query: 50 EYGIWSGNYVGLHISRLYET-------------------HPLADTINRKTYNSLLPNGLG 90
W+G YVG ++ + + P +T+ + NS G G
Sbjct: 35 PAYNWTGFYVGGNVGGQWGSSDPSTSTVFSPTGYFAASSVPAINTVGAQGINSSSVTG-G 93
Query: 91 IELGHNIQLEDFVFGINCHTT--AAKDDSTFYRL-------------KEKYFIYGDVVLK 135
G+N Q+ V G+ K +T L + +
Sbjct: 94 FTAGYNWQVNHAVLGLEGDINYFGFKGSATGSALYPCCAPTGFTVSSSVSADWLATIRGR 153
Query: 136 AGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
G+ + + L+Y GG A V + ++ G+G +Y
Sbjct: 154 IGFLAAPTWLLYATGGAAIAEVK-GNFNFTDTFAGATESSAIRDTRLGWTAGVGTEYAFG 212
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN---------AHIASLGINMHF 242
SL A Y Y+ S ++N + V + N ++I +G+N F
Sbjct: 213 GGWSLKAEYLYVDLGRASATSTNLAAFVPAIAFPSNVYTHSVDLKSNIVRVGVNYKF 269
>gi|254718838|ref|ZP_05180649.1| OmpA-like transmembrane domain protein [Brucella sp. 83/13]
gi|265983822|ref|ZP_06096557.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306838760|ref|ZP_07471594.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
gi|306843662|ref|ZP_07476262.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|206596726|emb|CAQ68393.1| outer membrane protein 25 [Brucella sp. BO1]
gi|264662414|gb|EEZ32675.1| outer-membrane immunogenic protein [Brucella sp. 83/13]
gi|306275972|gb|EFM57681.1| OmpA-like transmembrane domain protein [Brucella sp. BO1]
gi|306406162|gb|EFM62407.1| OmpA-like transmembrane domain protein [Brucella sp. NF 2653]
Length = 213
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTNVRNKLDTQDIRVGIGYKF 213
>gi|306844392|ref|ZP_07476982.1| outer membrane protein [Brucella sp. BO1]
gi|306275205|gb|EFM56955.1| outer membrane protein [Brucella sp. BO1]
Length = 230
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 26/206 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y G + + L + N T + PNG G+ G+N + F+ G+
Sbjct: 38 PGFSWAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGL 96
Query: 107 NCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ + + + G V +AGY++D + Y GG A+
Sbjct: 97 DANVDYNNLKKSRDFITNGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGV--AFG 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++ + S +K + + +G G+DY ++ L YRY +
Sbjct: 155 GIKNSLRIGGEESSKSKTQ-----TGWTVGAGIDYAATDNVLLRLEYRYTDY-----GKK 204
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
N + + LG+ F
Sbjct: 205 NFGLNDLDTRGSFKTNDIRLGVAYKF 230
>gi|306842032|ref|ZP_07474705.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
gi|306287873|gb|EFM59293.1| OmpA-like transmembrane domain protein [Brucella sp. BO2]
Length = 213
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +G+ F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRNKLDTQDIRVGLGYKF 213
>gi|312113978|ref|YP_004011574.1| outer-membrane immunogenic protein precursor; secreted protein
[Rhodomicrobium vannielii ATCC 17100]
gi|311219107|gb|ADP70475.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Rhodomicrobium vannielii ATCC 17100]
Length = 243
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 26/253 (10%)
Query: 5 GYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS 64
GY A+ VV L++ A D+ L + V + W+G Y G I
Sbjct: 2 GYKAILTVVTLTVAATGGVNATDIAKSAPGGLKDAPYVEVPWN------WAGAYYGATIG 55
Query: 65 RLYETHPLADTINRKTYNSLLPNG-----LGIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ T N + + N LG +G+N Q+ ++ G +
Sbjct: 56 YGSGGSKASVTANANDEHGVDTNDPDGVLLGGTIGYNYQIAPTWLIGAEADFSWLGLQGD 115
Query: 119 -------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + + + GY++ LIYG G+ + ++ S N+ N
Sbjct: 116 QGKAVFDGHYWTGGWDGLFTLRGRLGYTMGRTLIYGTAGYAALHTNET-----ISGNNTN 170
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS--VNNSNAKSDVERVDRKG 229
S V+G G+++ + +S+ A Y + + S + +
Sbjct: 171 ESSFGTDWRSGWVVGGGVEHFLTERLSVKAEYLHAGFEDLTGATGFPGNYSATQNYKLES 230
Query: 230 NAHIASLGINMHF 242
+ + +G+N
Sbjct: 231 DLDLVRIGLNYKL 243
>gi|209883207|ref|YP_002287064.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
gi|209871403|gb|ACI91199.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
Length = 644
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG---L 89
AD ++ W+G YVG HI + T + I+ + + G
Sbjct: 8 PALSAQAADLPLKAPAIPAYDWNGAYVGAHIGYSFGT-AHGEVIDGSAFPTHHHFGGAMA 66
Query: 90 GIELGHNIQL-EDFVFGINCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGY 138
G G+N+ L + G + A + L E+ G + + GY
Sbjct: 67 GFHAGYNVLLPSRILLGAEADISFPSYFESNALIATTPTAGNMLTERLDYAGSLRARLGY 126
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ L+Y GGF A + D + + + G G++Y + S
Sbjct: 127 ATPQWLLYVTGGFAFAGERFENELAPFKD-------KRIAYRTGWTAGAGIEYAIAPLWS 179
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
Y Y SV ++ + + H LG++
Sbjct: 180 ARLEYLYSDFGRTSVVMNSGLQATSAL----DMHSVRLGLS 216
>gi|316934026|ref|YP_004109008.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris DX-1]
gi|315601740|gb|ADU44275.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris DX-1]
Length = 246
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 19/180 (10%)
Query: 49 DEYGIWSGNYVGLHIS-----RLYETHPLADTINRKTYNS---LLPNGLGIELGHNIQLE 100
WSG Y+G + ++ +G ++G+N Q+
Sbjct: 37 PAMYDWSGFYIGANGGWGSSRNCWDYLGTTAAPFAAFGEGCHDASGGTVGGQIGYNWQVG 96
Query: 101 DFVFGINCHTTAAKDDSTFYRLK-------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+VFG+ A + L+ K +G + GY+ ++ L+Y GG
Sbjct: 97 TWVFGVEAQGNWADFKGSNASLRFTDTTNESKVDAFGLFTARVGYAWNNALLYVKGGAAV 156
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
++ + +A G +G GL+Y + S + Y ++ +
Sbjct: 157 TSDKYTTYRTLAGTIIDDASETRWGAA----VGGGLEYGFTPNWSFAVEYDHLFMGGRDL 212
>gi|254718339|ref|ZP_05180150.1| outer membrane protein, putative [Brucella sp. 83/13]
gi|265983298|ref|ZP_06096033.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839561|ref|ZP_07472367.1| outer membrane protein [Brucella sp. NF 2653]
gi|306842593|ref|ZP_07475242.1| outer membrane protein [Brucella sp. BO2]
gi|264661890|gb|EEZ32151.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306287238|gb|EFM58726.1| outer membrane protein [Brucella sp. BO2]
gi|306405347|gb|EFM61620.1| outer membrane protein [Brucella sp. NF 2653]
Length = 230
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 26/206 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y G + + L + N T + PNG G+ G+N + F+ G+
Sbjct: 38 PGFSWAGAYFGGQVGYGWGRAKLENRTNGGT-SEFKPNGFIGGLYTGYNFDTGNNFILGL 96
Query: 107 NCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ + + + G V +AGY++D + Y GG A+
Sbjct: 97 DANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVRARAGYAIDRFMPYIAGGV--AFG 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++ + S +K + + +G G+DY ++ L YRY +
Sbjct: 155 GIKNSLRIGGEESSKSKTQ-----TGWTVGAGIDYAATDNVLLRLEYRYTDY-----GKK 204
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
N + + LG+ F
Sbjct: 205 NFGLNDLDTRGSFKTNDIRLGVAYKF 230
>gi|115526777|ref|YP_783688.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115520724|gb|ABJ08708.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris BisA53]
Length = 228
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/206 (21%), Positives = 71/206 (34%), Gaps = 26/206 (12%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
Y W+G Y+G HI + T N+ G++ G++ Q +
Sbjct: 32 PAYAPAPIYNWTGFYIGGHIGGAFVGDD--SIATGVTRNNDGTFLGGVQGGYDYQFAPNW 89
Query: 103 VFGINCHTTAAKDDST-----FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA-YV 156
VFGI + + Y +K G V + GY+ L+Y GG+ A Y
Sbjct: 90 VFGIEAQYSWLDSGTDPVLVGAYSFSDKQKGLGSVTGRIGYTWGPALLYAKGGYAFADYD 149
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+L V + S + +G GL+Y+ S Y+Y
Sbjct: 150 TTVTLGGVGAAVSSKS--------DGYTVGGGLEYLFAPSWSAKVEYQYYDFGNVDFGTF 201
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ K+D H+ G+N F
Sbjct: 202 SVKND---------EHVVKAGLNYRF 218
>gi|256254959|ref|ZP_05460495.1| porin [Brucella ceti B1/94]
gi|261222144|ref|ZP_05936425.1| Omp25b [Brucella ceti B1/94]
gi|265998108|ref|ZP_06110665.1| Omp25b [Brucella ceti M490/95/1]
gi|46251220|gb|AAS84581.1| Omp25b [Brucella ceti]
gi|46251222|gb|AAS84582.1| Omp25b [Brucella ceti]
gi|260920728|gb|EEX87381.1| Omp25b [Brucella ceti B1/94]
gi|262552576|gb|EEZ08566.1| Omp25b [Brucella ceti M490/95/1]
Length = 236
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 23/184 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 38 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 94
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 95 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 154
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 155 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 209
Query: 215 NSNA 218
+
Sbjct: 210 VVDG 213
>gi|256159691|ref|ZP_05457444.1| porin [Brucella ceti M490/95/1]
Length = 240
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 23/184 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + + FV G+
Sbjct: 42 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 98
Query: 107 NCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ T D++ + K G V + G ++D + Y GG V
Sbjct: 99 DGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNV 158
Query: 157 IDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+S + +ES +K + G G+DY ++ + YRY + +
Sbjct: 159 KNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFS 213
Query: 215 NSNA 218
+
Sbjct: 214 VVDG 217
>gi|23501588|ref|NP_697715.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|62289663|ref|YP_221456.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82699590|ref|YP_414164.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|163842972|ref|YP_001627376.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|254688973|ref|ZP_05152227.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 6 str.
870]
gi|254697107|ref|ZP_05158935.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254701484|ref|ZP_05163312.1| OmpA-like transmembrane domain protein [Brucella suis bv. 5 str.
513]
gi|254704031|ref|ZP_05165859.1| OmpA-like transmembrane domain protein [Brucella suis bv. 3 str.
686]
gi|254707067|ref|ZP_05168895.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M163/99/10]
gi|254709823|ref|ZP_05171634.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
B2/94]
gi|254713826|ref|ZP_05175637.1| OmpA-like transmembrane domain protein [Brucella ceti M644/93/1]
gi|254717116|ref|ZP_05178927.1| OmpA-like transmembrane domain protein [Brucella ceti M13/05/1]
gi|254730003|ref|ZP_05188581.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 4 str.
292]
gi|256031313|ref|ZP_05444927.1| OmpA-like transmembrane domain protein [Brucella pinnipedialis
M292/94/1]
gi|256159433|ref|ZP_05457205.1| OmpA-like transmembrane domain protein [Brucella ceti M490/95/1]
gi|256254721|ref|ZP_05460257.1| OmpA-like transmembrane domain protein [Brucella ceti B1/94]
gi|256257221|ref|ZP_05462757.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 9 str.
C68]
gi|256369135|ref|YP_003106643.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260168451|ref|ZP_05755262.1| OmpA-like transmembrane domain protein [Brucella sp. F5/99]
gi|260545586|ref|ZP_05821327.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260754463|ref|ZP_05866811.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260757682|ref|ZP_05870030.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260761509|ref|ZP_05873852.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883492|ref|ZP_05895106.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|261218931|ref|ZP_05933212.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261221901|ref|ZP_05936182.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|261314536|ref|ZP_05953733.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261317361|ref|ZP_05956558.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261321570|ref|ZP_05960767.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261752028|ref|ZP_05995737.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261754686|ref|ZP_05998395.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|261757914|ref|ZP_06001623.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|265988399|ref|ZP_06100956.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
gi|265997865|ref|ZP_06110422.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|3914205|sp|Q45689|OM25_BRUSU RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|68067868|sp|Q44664|OM25_BRUAB RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457937|gb|AAB36695.1| 25 kDa outer membrane protein [Brucella suis 1330]
gi|23347502|gb|AAN29630.1| outer-membrane protein Omp25 [Brucella suis 1330]
gi|46251178|gb|AAS84560.1| Omp25 [Brucella ceti]
gi|46251180|gb|AAS84561.1| Omp25 [Brucella ceti]
gi|46251182|gb|AAS84562.1| Omp25 [Brucella pinnipedialis]
gi|46251184|gb|AAS84563.1| Omp25 [Brucella ceti]
gi|62195795|gb|AAX74095.1| outer-membrane protein, 25 kDa [Brucella abortus bv. 1 str. 9-941]
gi|82615691|emb|CAJ10678.1| OmpA-like transmembrane domain [Brucella melitensis biovar Abortus
2308]
gi|157310307|emb|CAN43865.1| outer membrane protein 25 [Brucella microti CCM 4915]
gi|157310309|emb|CAN43866.1| outer membrane protein 25 [Brucella microti]
gi|163673695|gb|ABY37806.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella suis
ATCC 23445]
gi|255999295|gb|ACU47694.1| outer-membrane protein Omp25 [Brucella microti CCM 4915]
gi|260096993|gb|EEW80868.1| outer-membrane immunogenic protein [Brucella abortus NCTC 8038]
gi|260668000|gb|EEX54940.1| outer-membrane protein [Brucella abortus bv. 4 str. 292]
gi|260671941|gb|EEX58762.1| outer-membrane immunogenic protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674571|gb|EEX61392.1| outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|260873020|gb|EEX80089.1| outer-membrane immunogenic protein [Brucella abortus bv. 9 str.
C68]
gi|260920485|gb|EEX87138.1| outer-membrane immunogenic protein [Brucella ceti B1/94]
gi|260924020|gb|EEX90588.1| outer membrane protein [Brucella ceti M13/05/1]
gi|261294260|gb|EEX97756.1| outer membrane protein Omp25 [Brucella ceti M644/93/1]
gi|261296584|gb|EEY00081.1| outer-membrane immunogenic protein [Brucella pinnipedialis B2/94]
gi|261303562|gb|EEY07059.1| outer membrane protein [Brucella pinnipedialis M163/99/10]
gi|261737898|gb|EEY25894.1| outer-membrane immunogenic protein [Brucella sp. F5/99]
gi|261741781|gb|EEY29707.1| outer-membrane immunogenic protein [Brucella suis bv. 5 str. 513]
gi|261744439|gb|EEY32365.1| outer-membrane immunogenic protein [Brucella suis bv. 3 str. 686]
gi|262552333|gb|EEZ08323.1| outer-membrane protein [Brucella ceti M490/95/1]
gi|264660596|gb|EEZ30857.1| outer-membrane immunogenic protein [Brucella pinnipedialis
M292/94/1]
Length = 213
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|161618670|ref|YP_001592557.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
gi|161335481|gb|ABX61786.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella canis
ATCC 23365]
Length = 213
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|296445629|ref|ZP_06887584.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium
OB3b]
gi|296256874|gb|EFH03946.1| outer membrane protein Omp31 precursor [Methylosinus trichosporium
OB3b]
Length = 225
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 18/203 (8%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVF 104
Y W G YVG+H + R +G+ G+N F+
Sbjct: 35 YSPPPAFTWRGFYVGVHGGYGFGAFQDN---GRSLLGEPNGWLVGVTGGYNYTFGPNFLI 91
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYG-----DVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
G+ + + G + +AG D L+Y GGF G +
Sbjct: 92 GLEADFDFSGGKGGGSPIAGVVGSSGVDNIMTLRPRAGMIFDRALVYVTGGFAGVVASGT 151
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ G+ + S LG G++Y + ++S A Y + +
Sbjct: 152 V-----GNVYNGFFGQQSQYLSGWALGAGIEYGLAPNLSAKAEYLFTSVG----GERYFE 202
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ + + G N HF
Sbjct: 203 FTPNALTSTLDTSLVRGGFNYHF 225
>gi|296445959|ref|ZP_06887909.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256477|gb|EFH03554.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 292
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 76/239 (31%), Gaps = 49/239 (20%)
Query: 53 IWSGNYVGLHISRLYETHPLADTI----------NRKTYNSLLPNGL----------GIE 92
+W+G YVG++ + ++ L G G +
Sbjct: 41 LWNGFYVGINAGATFGGDATKTNAIPGFAVPGLGPNLATSAALATGSYPSDDARFLGGGQ 100
Query: 93 LGHNIQLED-FVFGINCHT-------------------TAAKDDSTFYRLKEKYFIYGDV 132
+G+N Q FV G+ ++ ++ G +
Sbjct: 101 IGYNFQASPSFVLGLEADIQGVAGSRSTAKNSGLGIPAGFLGVVASDTTTTKRLDYLGTM 160
Query: 133 VLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG---SSVVLGIG 188
+ G+ + +LL+Y GG V + + + G F G+ G G
Sbjct: 161 RGRVGFLAAPTLLLYATGGLAYGEVGSTVTIGQANLPFAPSFGSFGGYSDLRVGWTAGGG 220
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAK-----SDVERVDRKGNAHIASLGINMHF 242
L++++ S+ Y Y + S + V + + H+A +G+N HF
Sbjct: 221 LEWLLAPKWSVKLEYLYYDLGSVTYQGSALSFAGLYASTPVVKTRFDGHVARMGLNYHF 279
>gi|319783214|ref|YP_004142690.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169102|gb|ADV12640.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 221
Score = 86.0 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 15/167 (8%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGIN 107
W+G Y GL + ++ T + +G +G + Q + V G
Sbjct: 33 PGFDWTGYYAGLQAGYGWGQSDISVTEGAPFSIAPDIDGGFVGGHVAGLWQFDQAVLGAE 92
Query: 108 CHT-----TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ +G V KAGY++D LL+YG+GG A + S +
Sbjct: 93 ADLNYSSVGGTTVSALGSTFGTDIKWFGSVNAKAGYAMDRLLVYGIGGVAFAGIETSQVA 152
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
D+++ +G G+DY + + A YRY
Sbjct: 153 GPAFDSTRT--------NVGWTVGAGVDYALTDKFVVGAQYRYYDFG 191
>gi|312115998|ref|YP_004013594.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221127|gb|ADP72495.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 203
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 54/232 (23%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
S+V + + DLY + + W+G Y GL++ + AD
Sbjct: 13 ASVVAIASANSADLYRGQAGGYKDGPIVAPVAT------WTGFYAGLNVGYGWNDDADAD 66
Query: 75 TINRKTYNSLLPNGLGIELGHNIQ----LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
I +N Q V G+ + + +K +G
Sbjct: 67 GIIGGGQIG-----------YNWQGAFGTSPLVLGVETDIQGSDIKNDN---DDKLNYFG 112
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V + GY++ + L+Y GGF D + +G G++
Sbjct: 113 TVRGRLGYALGNSLVYATGGFAYGE-----------------FDGADKTSTGYTVGGGVE 155
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++S+ A Y Y + +N++ + +G+N HF
Sbjct: 156 HKFTPNLSVKAEYLYTDLGDNDSDNADFNT-------------VRVGLNYHF 194
>gi|241518381|ref|YP_002979009.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862794|gb|ACS60458.1| porin [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 207
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 64/193 (33%), Gaps = 20/193 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
WSG Y+G+ + + G +G+N Q ++ V GI +
Sbjct: 35 PAFTWSGPYLGIDGGAGWLNGDFSAG-GASASEDFNGGIFGGFVGYNFQFDNIVVGIEGN 93
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
++ G V + GY+ D LIYG G+ L ++ +
Sbjct: 94 LEHNWNEEEALGADVGTDWTGAVRGRVGYAFDKALIYGAAGWTATR-GYVDLPGLDKETE 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +G GLD+ + +I YRY + DV VD
Sbjct: 153 T---------FNGYTVGAGLDFAITNNIFARGEYRYNDF---------GEKDVLGVDVDL 194
Query: 230 NAHIASLGINMHF 242
+ H GI + F
Sbjct: 195 DQHELKFGIGVKF 207
>gi|254718340|ref|ZP_05180151.1| outer membrane protein [Brucella sp. 83/13]
gi|265983299|ref|ZP_06096034.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839562|ref|ZP_07472368.1| outer membrane protein [Brucella sp. NF 2653]
gi|264661891|gb|EEZ32152.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405348|gb|EFM61621.1| outer membrane protein [Brucella sp. NF 2653]
Length = 227
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 67/202 (33%), Gaps = 21/202 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G I + + G+ G+N L + V GI+
Sbjct: 38 PTFTWNGAYLGGQIGYAWGKSHFSYDSTGLGDIKPDGFLGGLYAGYNFDLGNSVVLGIDG 97
Query: 109 HTTAAK--------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
T D + + + G V +AGY+VD L Y GG A+ +
Sbjct: 98 DVTYNDVSKNIDFLDGNDAGSFENRLRWSGAVRARAGYAVDRFLPYIAGGV--AFGSLRN 155
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ E + +K + +G G+DY ++ L YRY + +A
Sbjct: 156 RGEFEDASFSQSKT-----LTGWTIGAGMDYAATDNVILRLEYRYTDYGNKDYGFDDAA- 209
Query: 221 DVERVDRKGNAHIASLGINMHF 242
V + G+ F
Sbjct: 210 ----VTNNFKTNDIRFGVAYKF 227
>gi|86749319|ref|YP_485815.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86572347|gb|ABD06904.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/240 (17%), Positives = 75/240 (31%), Gaps = 23/240 (9%)
Query: 10 FFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET 69
F + +++ PR W+G Y+G ++ +
Sbjct: 4 FLLSAVALGALGAPAFAADLGPRPAYTKAPPATAPTV----VYNWTGFYIGGNVGGAFAG 59
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRL------ 122
+ + G++ G + Q +V G+ + ++T
Sbjct: 60 -------SNNLQSDSGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVIFPAGSTA 112
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
E G V + GY+ L+Y GG+ DSSL + A
Sbjct: 113 TENTRGLGSVTGRIGYTWGPALLYAKGGYAF---RDSSLGVATAGGIPAAYSTSGSRNDG 169
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G GL+YM S Y+Y + ++ +D+ + + H GIN F
Sbjct: 170 YTVGAGLEYMFAPSWSAKVEYQYYKFDNTAF--TSGPADMVGTTFRNDDHTVKAGINYRF 227
>gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13]
gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
Length = 212
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 83/231 (35%), Gaps = 27/231 (11%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYG---IWSGNYVGLHISRLYETHPL 72
SI AV + + Y D WSGNYVG + P
Sbjct: 5 SITAAAFGTAVMAFAGSAFAADMMGGTDYTYNDPVAAGPHDWSGNYVGAQVGGSSSKFPS 64
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-STFYRLKEKYFIYGD 131
+ S GI +G N+Q + VFG A+ + + + G+
Sbjct: 65 P-------FASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGN 117
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
K GY+ D L+YG G+G +N+ +A G V++G G++
Sbjct: 118 AKGKVGYAFDKTLVYGTAGYGVT-------RFKAKENTTSA----PGWEGGVLIGAGVEQ 166
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ +S+ A Y + + + + +E+ + N H G+N F
Sbjct: 167 ALSGPLSVKAEYDF----QRFNDVKSQVNGIEQRNNLKN-HSIKAGLNYRF 212
>gi|39935882|ref|NP_948158.1| outer membrane protein [Rhodopseudomonas palustris CGA009]
gi|39649736|emb|CAE28257.1| possible outer membrane protein [Rhodopseudomonas palustris CGA009]
Length = 288
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 26/211 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLED 101
WSG YVG + + T L G G ++G+N Q+
Sbjct: 74 AAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGGQVGYNWQIST 133
Query: 102 FVFGINCHTTAAKDDSTFYRL---------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+VFG+ A + L + K +G + GY+ ++ LIY GG
Sbjct: 134 WVFGVEAQGNWADFKGSNANLLVIPAPTTNQTKIDAFGLFTARVGYAWNNALIYVKGGAA 193
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + D + +G GL+Y S + Y ++
Sbjct: 194 VTSDKYTRFR------TATGVFNDDASETRWGATVGTGLEYGFTPSWSFAVEYDHLFLGG 247
Query: 211 HSVNNSNAKSDVERVDR-KGNAHIASLGINM 240
+ S +V V K + + + IN
Sbjct: 248 RDLTFSPVLPNVSNVSHIKQDVDVVTARINY 278
>gi|115524371|ref|YP_781282.1| OmpA domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115518318|gb|ABJ06302.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris BisA53]
Length = 235
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 65/212 (30%), Gaps = 23/212 (10%)
Query: 40 ADNNVEYQDDE-YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ 98
A Y E W+G Y+G H+ + + + G++ G + Q
Sbjct: 28 ATKAPAYTAPEIVYNWTGFYIGGHVGGAFAGDDNITGSDGRFLA-------GVQGGADYQ 80
Query: 99 LE-DFVFGINCHTTAAKDDSTFYR-------LKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
++V GI + D + + G V + GYS L+Y GG
Sbjct: 81 FARNWVVGIEAQYSWLPTDGNGGLLYPGNTLVTQDNRGLGSVTGRLGYSWGPALLYAKGG 140
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ S+ +G GL+Y+ + S Y+Y
Sbjct: 141 YAFRDSSIDV-----SNLGAQPFATSGNKKDGYSVGGGLEYLFAPNWSAKVEYQYYNFGN 195
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S D+ + + H GIN F
Sbjct: 196 TSFTG--GPPDIVGSSVRNDEHTVKAGINYRF 225
>gi|27376983|ref|NP_768512.1| hypothetical protein bll1872 [Bradyrhizobium japonicum USDA 110]
gi|27350125|dbj|BAC47137.1| bll1872 [Bradyrhizobium japonicum USDA 110]
Length = 602
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 21/174 (12%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY-----------FIYGDVVLKAGY 138
G ++G+N Q +V+G+ +AA + L ++ + GY
Sbjct: 114 GGQIGYNWQNNSWVYGLELDASAAVASGSNTCLAASDLIVSANCNAAPNLFATGTGRIGY 173
Query: 139 SVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
+ S L Y G + E + K FD V+G+G++ +
Sbjct: 174 AFGSLGQTLAYLKAGAAWQNNRGDIVNNFEGGDLPQEKTHFDYGQVGGVIGLGVEQALTP 233
Query: 196 DISLSASYRYIPHHIHSVNNSNAKS-------DVERVDRKGNAHIASLGINMHF 242
S++ Y Y+ SV ++ N HI +G+N HF
Sbjct: 234 SWSVNVEYDYLHFGGPSVATASTAKLSPSTILPASTTSLSSNYHIGKIGLNYHF 287
>gi|256060827|ref|ZP_05450987.1| OmpA-like transmembrane domain protein [Brucella neotomae 5K33]
gi|261324818|ref|ZP_05964015.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
gi|3914203|sp|Q45326|OM25_BRUNE RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457935|gb|AAB36694.1| 25 kDa outer membrane protein [Brucella neotomae]
gi|261300798|gb|EEY04295.1| outer-membrane protein Omp25 [Brucella neotomae 5K33]
Length = 213
Score = 85.6 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|91977226|ref|YP_569885.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91683682|gb|ABE39984.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 241
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 75/199 (37%), Gaps = 19/199 (9%)
Query: 50 EYGIWSGNYVGLHIS--RLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFG 105
WSG Y+G + ++ S +G G ++G+N Q +VFG
Sbjct: 38 AVYDWSGFYIGANGGWGTSRKSWDFYTVGGLAAEGSHDASGATAGGQIGYNWQAGSWVFG 97
Query: 106 INCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ A + L + + +G + GY+ ++ L+Y GG A V++
Sbjct: 98 LEAQGNWADFKGSNVTLLGGLFDNQSRIDAFGLFTGRVGYAWNNALLYAKGG---AAVVN 154
Query: 159 SSLEKVES-DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + D G++ +G G +Y + S + Y ++ V +N
Sbjct: 155 DKYDFIRRADGFVTGTASETRWGAA--VGAGFEYGFTPNWSFAVEYDHLFLDKKDVTFTN 212
Query: 218 AKSDVERVDRKGNAHIASL 236
+ VER+ + + A +
Sbjct: 213 --TAVERIKQDADIVTARI 229
>gi|39937872|ref|NP_950148.1| hypothetical protein RPA4814 [Rhodopseudomonas palustris CGA009]
gi|39651732|emb|CAE30254.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 561
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 77/255 (30%), Gaps = 34/255 (13%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
I+V +LA + D+ W+G Y G H+ + + +D
Sbjct: 3 RILVTVATLATVISPAAAADMPRFPPLMPVA--PVSWNWTGLYWGAHVGGSFGSSSFSDP 60
Query: 76 INRKTYNSLLPNGL---GIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKY----- 126
Y + + GI++G+N Q +++ G+ ++ T +
Sbjct: 61 AGPGLYGGSVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKGTNTCMASSGLFISS 120
Query: 127 ------FIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ +AG+ L+Y GG N A
Sbjct: 121 NCRVRQDALATLTGRAGFVTGPGGRTLLYAKGGAAYLSERLDIAVGYPLGNLTAANDG-- 178
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV----------DR 227
+G G++ + S+ Y Y + +++ V V
Sbjct: 179 --RWGWTVGAGIERALAPAWSVKLEYNYADFGSRDMATPDSERLVPGVGSFATPQGTSRV 236
Query: 228 KGNAHIASLGINMHF 242
+ + H +G+N+ F
Sbjct: 237 EQDLHAVKVGLNLKF 251
>gi|148254831|ref|YP_001239416.1| hypothetical protein BBta_3415 [Bradyrhizobium sp. BTAi1]
gi|146407004|gb|ABQ35510.1| putative outer membrane protein of unknown function [Bradyrhizobium
sp. BTAi1]
Length = 680
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/256 (15%), Positives = 74/256 (28%), Gaps = 38/256 (14%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD- 74
I + + L++ L +P D + Q W+G ++G H + +
Sbjct: 6 RIGLTSAVLSLALAIPGPTDAAPIRSAEADIQA-----WTGPFLGGHFGYVGGASSWSAS 60
Query: 75 -----------TINRKT-YNSLLPNGLGIELGHNIQL-EDFVFGINCHTT---------- 111
N + G++ G+N L V G+ +
Sbjct: 61 NAVTTVSGSTGVFNSYDVFKGTGSYLFGLQAGYNWTLPSRLVLGVEADVSTPNTVAGERT 120
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY-----VIDSSLEKVES 166
+ +E G + GY+ D L+Y GGF +Y + L V S
Sbjct: 121 VTSASAGTASYRETVLAMGTARARLGYAFDHWLLYATGGFAWSYDRLERTQLAGLPLVGS 180
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ V G+G + + + A + H + E +
Sbjct: 181 AVAGTVDTALT-WRLGWVAGLGAELPIAPHWTAKAEFLASEFGSH---RKALAASAESLS 236
Query: 227 RKGNAHIASLGINMHF 242
+ LG+N
Sbjct: 237 SNLSVQRLQLGLNYQL 252
>gi|192288904|ref|YP_001989509.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
gi|192282653|gb|ACE99033.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
Length = 689
Score = 85.6 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 27/205 (13%)
Query: 49 DEYGIWSGNYVGLHIS--RLYETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLE-DFVF 104
D WSG YVG H R + L D + + N G + G+N + +
Sbjct: 65 DPAYDWSGFYVGAHAGYVRGHAGATLQDATSVAQNSNGAGGITAGAQAGYNFVTGSNLLL 124
Query: 105 GINCHTTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
G+ + ++ D+ + YG V + G L Y GG A
Sbjct: 125 GVEADISFPSYLPQNAVLSEFDNGTANTLQHLDYYGTVRARLGVIAGRWLGYVTGGL--A 182
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + L ++ NA+ G G++Y + S+ Y Y + SV+
Sbjct: 183 FEHERYLTDPDAGRVMNAR-------IGWAAGAGVEYGFAPNWSVRIEYLYSQYQNASVD 235
Query: 215 NSNAKSDVERVDRKGNAHIASLGIN 239
S ++ + +G+N
Sbjct: 236 LPTGASYATSLNLQ----TVRVGVN 256
>gi|91978859|ref|YP_571518.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5]
gi|91685315|gb|ABE41617.1| OmpA-like transmembrane region [Rhodopseudomonas palustris BisB5]
Length = 559
Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 65/223 (29%), Gaps = 32/223 (14%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL---GIELGHNIQLE-DFV 103
W+G Y G H+ + +D Y + + GI+LG+N Q +++
Sbjct: 30 APVLWNWTGLYWGAHLGGSFGASSFSDPAGPGIYGGNVRSPAAMAGIQLGYNYQPNANWL 89
Query: 104 FGINCHTTAAKDDSTFYRLKEKY-----------FIYGDVVLKAGYSVD---SLLIYGMG 149
G+ +A + T + V +AG L+Y G
Sbjct: 90 VGVEADLSALNGNGTNSCMVSSGLVISANCRVRQDAMATVTGRAGLVTGPGGRTLLYAKG 149
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G S + N + G G++ + S+ Y Y
Sbjct: 150 GAAF----LSERIDITVGNPLRSSTDNSDGRWGWTAGAGIEQALAPAWSVKFEYDYANFG 205
Query: 210 IHSVNNSNAKSDVERV----------DRKGNAHIASLGINMHF 242
V + V V + H +G+N+ F
Sbjct: 206 SSDVATPASYRLVPWVGYFPTPQGTSKVSQDLHAVKVGLNLKF 248
>gi|27382806|ref|NP_774335.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27355979|dbj|BAC52960.1| blr7695 [Bradyrhizobium japonicum USDA 110]
Length = 288
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 18/207 (8%)
Query: 50 EYGIWSGNYVGLHIS--RLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFG 105
W+G Y+G + + + + +G +G ++G+ Q FVFG
Sbjct: 75 PIYDWTGFYIGANGGWGQSHSCVDFVTALGTVASGCGDRSGGVVGGQIGYRWQTSQFVFG 134
Query: 106 INCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ A +T L K G + G++ +S L+Y GG
Sbjct: 135 LEAQGDWADLKNTRVSLFNPTLSTTAKTDAIGLFTGQLGWAWNSALLYVKGGAAVTSNRL 194
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ + + + D LG+G +Y + S+ Y ++ + + S
Sbjct: 195 TIFD----NTTGIGLVSADNTRWGGTLGVGFEYGFTPNWSVGVEYDHLWMGHANNSFSVV 250
Query: 219 KSDVERVDR---KGNAHIASLGINMHF 242
+ V + + ++ N F
Sbjct: 251 DPRLAAVLNDRISQDVDMVTVRFNYRF 277
>gi|3914201|sp|Q45110|OM25_BRUCA RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457931|gb|AAB36692.1| 25 kDa outer membrane protein [Brucella canis]
Length = 213
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDGESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQYS-----NKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|75674387|ref|YP_316808.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419257|gb|ABA03456.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 453
Score = 85.2 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 25/206 (12%)
Query: 50 EYGIWSGNYVGLHISRLYE-THPLADTINRKTYNSLLPNGL--GIELGHNIQ----LEDF 102
W+G YVG++ + D L P G G ++G+N Q
Sbjct: 35 PVYDWTGLYVGVNAGLGLGRNRAVHDFGVGAISTHLQPLGAVGGGQIGYNWQTNSFFGPL 94
Query: 103 VFGINCHTTAAKDDSTF------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
VFGI A + ++ +G + G +L Y GG+ +V
Sbjct: 95 VFGIEADIQGADMTDNRTNFAGLLQYNQRLDWFGTARGRVGLINGPMLTYVTGGWAYGHV 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ ++ F G + G G++ + + + Y Y+ + + +
Sbjct: 155 GTTVIQGGV-------PFAFSGGRNGWTFGSGVEAALGGNWTGKIEYLYLDFGNRTDSFA 207
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +I G+N F
Sbjct: 208 G-----QALRSEMRENIFRAGLNYRF 228
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 35/214 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLL--PNGL--GIELGHNIQLEDFVFGINCH 109
W+G Y+G ++ + + P+G G ++G+N Q + V G+
Sbjct: 242 WNGLYLGGNVGGGVGRNRTTISNPAGNLAQFNLAPDGFVGGGQIGYNWQAGNIVLGLETD 301
Query: 110 TTAAKDDS----------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
A + K +G V + GY+V + + Y GGF + +
Sbjct: 302 FQGATLQDNKTCIGCVPGASFDFNSKLQWFGTVRGRLGYAVGNSMFYATGGFAYGNIRTA 361
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY-----------MVNYDISLSASYRYIPH 208
+ + N N + + +G G++ + + + + Y ++
Sbjct: 362 LNTPLNNFNFSNTR-------TGYAVGGGIETPLPMVNLFGGPLFGPNWTSTTEYLFVDL 414
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S N + + HI G+N HF
Sbjct: 415 GRSSFNIGGGPNVLT---TGAQEHIFRTGLNYHF 445
>gi|90418791|ref|ZP_01226702.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
gi|90336871|gb|EAS50576.1| hypothetical protein SI859A1_00696 [Aurantimonas manganoxydans
SI85-9A1]
Length = 263
Score = 84.9 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 70/219 (31%), Gaps = 30/219 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-----------GIELGHNIQLEDF 102
W+G Y+G + T N G +G++ Q+ DF
Sbjct: 44 WTGLYIGGQAGVAFGNESDGATFNPGGGGPFGTGTYSEDDDNAGFIGGGHIGYDYQINDF 103
Query: 103 VFGINCHTTAAKDDS---------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
V G ++ + + G V + GY++DS+L+YG GG
Sbjct: 104 VVGAVADINYIDAETNRSYTTGGGSTFSTSSDINYLGTVRARVGYAMDSVLLYGTGGLAY 163
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
A V +++ S N D + + +G G+D M +IS Y Y +
Sbjct: 164 AGVDNNASAPASSGTFTNYTFEQDENDTDIGYAVGGGVDVMATNNISFGVEYLYTNLGSN 223
Query: 212 S--------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N + E + + H + F
Sbjct: 224 DQTITGTDSTNGNTVSFTSESNNDDLDFHTIWAKASYRF 262
>gi|190891678|ref|YP_001978220.1| outer membrane protein [Rhizobium etli CIAT 652]
gi|218510868|ref|ZP_03508746.1| outer membrane protein [Rhizobium etli Brasil 5]
gi|190696957|gb|ACE91042.1| outer membrane protein [Rhizobium etli CIAT 652]
Length = 207
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 60/193 (31%), Gaps = 20/193 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
WSG Y G+ + + G G+N Q ++ V GI +
Sbjct: 35 PVFTWSGPYFGIDGGAGWLNGDFSAG-GASADEDFNGGVFGAFAGYNFQFDNIVVGIEGN 93
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
++ G V + GY+ D LIYG G+
Sbjct: 94 IEHNWNEEDALGADVGTDWAGAVRGRVGYAFDKALIYGAAGWAATRGYV----------D 143
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ + +G G+D+ + +I YRY + + D+ VD
Sbjct: 144 APGFDKETETFNGYTVGAGVDFAITNNIFARGEYRYNDY---------GEKDILGVDVDL 194
Query: 230 NAHIASLGINMHF 242
+ H GI + F
Sbjct: 195 DQHELKFGIGVKF 207
>gi|254693454|ref|ZP_05155282.1| OmpA-like transmembrane domain protein [Brucella abortus bv. 3 str.
Tulya]
gi|261213709|ref|ZP_05927990.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915316|gb|EEX82177.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 213
Score = 84.9 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRTKLDTQDIRVGIGYKF 213
>gi|75677026|ref|YP_319447.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi
Nb-255]
gi|74421896|gb|ABA06095.1| outer membrane autotransporter barrel [Nitrobacter winogradskyi
Nb-255]
Length = 652
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 24/212 (11%)
Query: 54 WSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y+G L + G ++G++ Q +V GI A
Sbjct: 432 WTGFYIGASTGVLNGRTDWSFPGFGTGANPRFAGFAGGGQIGYDWQTGPWVVGIEGAFNA 491
Query: 113 AKD-------DSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKV 164
+ ++ FY + + G K GY+ L+Y GG S
Sbjct: 492 SNANGARSCPNALFYTCRNEIDWLGTATAKLGYALWSRSLVYLRGGAAFGNTRIVSTCNT 551
Query: 165 ESDNSKNAKG------------RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-- 210
+ +G G ++ ++ + ++ A Y
Sbjct: 552 GPNGQYIDYSIPALITQPGCGASSSRTAVGWTIGYGAEFALSRNWTVRAESNYFDLGTER 611
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
HS+ ++ VD + + I+++G+N F
Sbjct: 612 HSLAQGGGIPPIQ-VDVRNHGFISTVGLNYRF 642
>gi|146343440|ref|YP_001208488.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146196246|emb|CAL80273.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 242
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 71/209 (33%), Gaps = 14/209 (6%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
A Y Y W+G Y+G H+ + + + ++ G G++ G + Q
Sbjct: 32 ATKAPAYVAPIYN-WTGFYLGAHLGGAFSSDNNFSGLGTGNNSNGRFLG-GVQAGADWQF 89
Query: 100 ED-FVFGINC-----HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+V G + Y G + + GY+ L+Y GG+
Sbjct: 90 APTWVIGAEGQYSWLSGSVGAAFPGGYVYNNSQRGLGSITGRVGYTWGPGLLYVKGGYAY 149
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + EKV ++ H + +G G++YM + S A Y+Y +
Sbjct: 150 S----DNNEKVTLAGNQVGFATSGDHRNGWTVGGGIEYMFAPNWSAKAEYQYYNFGSATF 205
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
A V + H G+N F
Sbjct: 206 AAPAA--LVPTGSFTTDDHTFKAGVNYRF 232
>gi|150396008|ref|YP_001326475.1| porin [Sinorhizobium medicae WSM419]
gi|150027523|gb|ABR59640.1| porin [Sinorhizobium medicae WSM419]
Length = 212
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 81/232 (34%), Gaps = 23/232 (9%)
Query: 12 VVFLSIVVPNHSL-AVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
++ +++ +L A + A EY + WSG YVG I +
Sbjct: 3 MLTTTLMASAMALVAFQAAHAADVVDEIPAAPAAEYTEPAVRNWSGAYVGGTIDWHHG-- 60
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
+ N + G G+ G+N+Q V+G +DS + + + G
Sbjct: 61 ----EADATGNNKSVGTGGGLYGGYNVQDGQMVYGGEADINYTGNDSHSSGRRVQQGLNG 116
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V + G V+ +L+YG G K G D G+G +
Sbjct: 117 SVRARVGVDVNPVLVYGTAGVALGNAEL-----------KTPAGSDDKTLVGWTAGVGAE 165
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V +I+ A YRY + + + ++ + + H LG+ + F
Sbjct: 166 TFVTDNITARAEYRYTDY-----GSKDFRTGGTTISSGYDEHAVKLGMGVKF 212
>gi|17987532|ref|NP_540166.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225852222|ref|YP_002732455.1| OmpA-like transmembrane domain-containing protein [Brucella
melitensis ATCC 23457]
gi|256044394|ref|ZP_05447298.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 1
str. Rev.1]
gi|256264270|ref|ZP_05466802.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|260563745|ref|ZP_05834231.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|265990813|ref|ZP_06103370.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|3914202|sp|Q45321|OM25_BRUME RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457927|gb|AAB06701.1| 25 kDa outer membrane protein [Brucella melitensis]
gi|17983234|gb|AAL52430.1| 25 kDa outer-membrane immunogenic protein precursor [Brucella
melitensis bv. 1 str. 16M]
gi|225640587|gb|ACO00501.1| OmpA-like transmembrane domain protein [Brucella melitensis ATCC
23457]
gi|260153761|gb|EEW88853.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
16M]
gi|263001597|gb|EEZ14172.1| outer-membrane immunogenic protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094531|gb|EEZ18340.1| outer-membrane protein Omp25 [Brucella melitensis bv. 2 str. 63/9]
gi|326408721|gb|ADZ65786.1| OmpA-like transmembrane domain protein [Brucella melitensis M28]
gi|326538444|gb|ADZ86659.1| OmpA-like transmembrane domain protein [Brucella melitensis M5-90]
Length = 213
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRNKLDTQDFRVGIGYKF 213
>gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 222
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 44 TYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 96
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 97 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVT------ 150
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 151 -RFKAKDNTTSA----SGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 201
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 202 GIEQRNNLKN-HSIKAGLNYKF 222
>gi|86751658|ref|YP_488154.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
gi|86574686|gb|ABD09243.1| outer membrane protein [Rhodopseudomonas palustris HaA2]
Length = 238
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 72/206 (34%), Gaps = 30/206 (14%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W+G Y+G HI + T S G+++G++ Q +V G+
Sbjct: 40 PIYNWTGFYIGGHIGGAFAGD--NSIGTGVTAGSDGKFLGGVQVGYDWQFAPSWVLGVEG 97
Query: 109 H---TTAAKDDSTF--------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA-YV 156
+ D +F Y + V + GY+ L+Y GG+ A Y
Sbjct: 98 QYSWLSGTNDAVSFTVPGVAGTYTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYT 157
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+L V + +S +++ +G GL+Y+ + S Y+Y +
Sbjct: 158 SSLTLSGVGTVSSTSSQD-------GYTVGGGLEYLFAQNWSGKIEYQYYDFGNVDLGA- 209
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
K + H+ G+N F
Sbjct: 210 -------GFTAKNDQHVVKAGLNYRF 228
>gi|146340934|ref|YP_001205982.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193740|emb|CAL77757.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 261
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/250 (14%), Positives = 79/250 (31%), Gaps = 27/250 (10%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNN---VEYQDDEYGIWSGNYVGLHISRLYETHPLA- 73
++ S+A+ P F W+G Y+GL+ + +
Sbjct: 6 LITTASVALLGLAPASAADFATRPYGKAPPPAYVTPLPSWAGFYLGLNGGADWSRNCWTL 65
Query: 74 ------DTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL--- 122
R++ + +G ++G+ Q +VFG+ S+
Sbjct: 66 NNVGGVPVAPRQSEGCHNASSGLIGGQVGYRWQAASWVFGLEAQGNWTDLKSSNASTAAL 125
Query: 123 ------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD-NSKNAKGR 175
K G + GY+ D++L Y GG A+ + +
Sbjct: 126 AAGITNTTKTDAIGLFTGQVGYAWDNVLWYVKGGAAVAHNKYTGTANAAAPVAVGTLLDS 185
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---NSNAKSDVERVDRKGNAH 232
+G G++Y + S++ Y ++ ++ +N S ++ + + +
Sbjct: 186 ASETRWGGTVGTGVEYGFAPNWSVAVEYDHLFMGSRDISFPATANVNSRIDTIKQDIDIA 245
Query: 233 IASLGINMHF 242
+ N F
Sbjct: 246 TVRV--NYRF 253
>gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840]
gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis]
gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840]
Length = 212
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGPHDWSGNYVGTQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|316932401|ref|YP_004107383.1| putative outer-membrane immunogenic protein [Rhodopseudomonas
palustris DX-1]
gi|315600115|gb|ADU42650.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Rhodopseudomonas palustris DX-1]
Length = 235
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 65/210 (30%), Gaps = 28/210 (13%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
Y W+G Y+G HI + T + G++ G++ Q +
Sbjct: 33 PAYAPAPIYNWTGFYIGGHIGGAFSGD--NSIGTGVTASDNGKFLGGVQAGYDWQFAPNW 90
Query: 103 VFGINCH---TTAAKDDSTF-------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
V G+ + F Y + V + GY+ L+Y GG+
Sbjct: 91 VLGVEGQYSWLSGTNQSVAFVDGLGNSYLFSDNQRGLASVTGRLGYTWGPALLYVKGGWA 150
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A + S D +G GL+Y+ + S Y+Y +
Sbjct: 151 YA-------DYSTSLTVNGFGVAVDSKTDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNVN 203
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N K + H+ G+N F
Sbjct: 204 LGN--------GFSAKNDEHVVKAGLNYRF 225
>gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 222
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 44 TYNDPVAAGPHDWSGNYVGARVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 96
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 97 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 150
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 151 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 201
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 202 GIEQRNNLKN-HSIKAGLNYKF 222
>gi|27380105|ref|NP_771634.1| hypothetical protein blr4994 [Bradyrhizobium japonicum USDA 110]
gi|27353259|dbj|BAC50259.1| blr4994 [Bradyrhizobium japonicum USDA 110]
Length = 296
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 66/212 (31%), Gaps = 21/212 (9%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTIN------RKTYNSLLPNGLGIELGHNIQLEDFVFG 105
WSG Y+G++ + ++ +G ++G+ Q +VFG
Sbjct: 77 YDWSGFYIGINGGGGSAHSCWDFVTPVTGTLVGEGCHNATGGTIGGQVGYRWQSASWVFG 136
Query: 106 INCHTTAAK-------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+ A T R + + +G + + GY+ +S+L+Y GG
Sbjct: 137 LEGQGNWADFSGDNISLLFPGSALVTGDRNRSRIDSFGLITGQVGYAWNSVLLYVKGGAA 196
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI--PHHI 210
+ + +G GL++ + S+ Y +I H
Sbjct: 197 VVGDKFDIYAAPGTPGAGTLLASGRDTRWGATVGAGLEFGFAPNWSVGVEYDHIFLGHQT 256
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + + +N F
Sbjct: 257 RDLTVPGTGLLFQTNRISQDVDMGLVRLNYRF 288
>gi|260466904|ref|ZP_05813087.1| porin [Mesorhizobium opportunistum WSM2075]
gi|259029300|gb|EEW30593.1| porin [Mesorhizobium opportunistum WSM2075]
Length = 238
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 84/233 (36%), Gaps = 30/233 (12%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN----SLLPNG 88
+ + + AD NV D WSG Y+G + + T +++ P+G
Sbjct: 13 PVGMASAADTNVVLPGDTTYNWSGAYIGAQAGYAWANARVGQTFAPGSFDDYGWGYNPSG 72
Query: 89 L--GIELGHNIQLED-FVFGINCHTTAAKD-DSTFYRL----------KEKYFIYGDVVL 134
G+ G N Q + V GI + A D+T YR + K G + L
Sbjct: 73 GFGGLYAGVNHQFDSGLVLGIEADYSFAGVKDTTHYRALGVDDPAFGGELKLDTVGSLRL 132
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+AGY+VD L + GG A +++ S G + LG G +Y V
Sbjct: 133 RAGYAVDRWLPFVTGGLAVASYKHTTVNLPGS----TPYADVKGTVAGYTLGAGAEYAVT 188
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA-----HIASLGINMHF 242
+ + YR+ H S S V +A H +G+ F
Sbjct: 189 DNWLVRGEYRFADFGRH---TSVRHSLVNGAPLNPDAVDLTTHDLRIGVAYKF 238
>gi|218461202|ref|ZP_03501293.1| outer membrane protein [Rhizobium etli Kim 5]
gi|218658675|ref|ZP_03514605.1| outer membrane protein [Rhizobium etli IE4771]
Length = 207
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 62/191 (32%), Gaps = 20/191 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y G+ + + G G+N Q ++FV GI +
Sbjct: 37 FTWSGPYFGIDGGAAWLNGDFSAG-GASASEDFNGGVFGGFAGYNFQFDNFVVGIEGNLE 95
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ + G V + GY+ D LIYG G+
Sbjct: 96 HNWNEEDALGAEVGTDWAGAVRGRVGYAFDKALIYGAAGWAATRGYV----------DAP 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + +G G+D+ + +I YRY + + D+ VD +
Sbjct: 146 GFDKETETFNGYTVGAGVDFAITNNIFARGEYRYNDY---------GEQDILGVDVDLDQ 196
Query: 232 HIASLGINMHF 242
H GI + F
Sbjct: 197 HELKFGIGVKF 207
>gi|209886119|ref|YP_002289976.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209874315|gb|ACI94111.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 237
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 21/158 (13%)
Query: 95 HNIQL--EDFVFGINCHTTAAKDDSTF------YRLKEKYFIYGDVVLKAGYSV-DSLLI 145
+N Q FVFG+ + D +F K ++G V + GY+V D LLI
Sbjct: 90 YNWQGFGSPFVFGLEAEIAGSGIDLSFVDPADGSGASYKLNMFGSVTGRVGYAVNDMLLI 149
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG+ A S ++ +S +S S +G GL+YM+ + S A Y Y
Sbjct: 150 YAKGGYAWARTKLSVVDGADSFSSSATH-------SGYTIGAGLEYMMARNWSTKAEYLY 202
Query: 206 IPHHIHSVNNS-NAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + + + H GIN HF
Sbjct: 203 ADYGKATYGPAPDGDTGRIGLSN----HTVKFGINYHF 236
>gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis]
gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
Length = 212
Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330]
gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
513]
gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
686]
gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330]
gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915]
gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti]
gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 212
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|83308664|emb|CAJ01572.1| outer membrane protein [uncultured bacterium]
Length = 252
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 69/227 (30%), Gaps = 37/227 (16%)
Query: 52 GIWSGNYVGLHISRLYETHP-----LADTINRK------TYNSLLPNGL--GIELGHNIQ 98
W+G Y+G I + NR + PNG+ G +G+N Q
Sbjct: 15 FTWTGVYLGGQIGYAWSNGSNNFNGFDPFFNRGRGVFLDSSAGGTPNGVIGGAHVGYNYQ 74
Query: 99 LEDF--------VFGINCHTTAAKD---------DSTFYRLKEKYFIYGDVVLKAGYSVD 141
+ + V G+ D + I G + + G + D
Sbjct: 75 IPSWNWFSSSGVVIGLEGTVDGTSLSNTAIAVFPDGSNVSASSTANIQGSIRGRIGIAWD 134
Query: 142 SLLIYGMGGFG-GAYVIDSSLEKVESDNSKN--AKGRFDGHGSSVVLGIGLDYMVNYDIS 198
LIYG GG G + + + A G + +G G+DY + + S
Sbjct: 135 RALIYGTGGVAFGGFETNVRFNGTDFATGAPFFASGSISSTRTGWTVGGGIDYAITNNWS 194
Query: 199 LSASYRYIPHH---IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ YRY + E R + +G + F
Sbjct: 195 IFGEYRYTNFGSIRENDFGQLPGGFTFEGSRRLQQ-NQVQVGFSYKF 240
>gi|115524895|ref|YP_781806.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53]
gi|115518842|gb|ABJ06826.1| putative outer membrane protein [Rhodopseudomonas palustris BisA53]
Length = 247
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 16/201 (7%)
Query: 52 GIWSGNYVGLHIS-----RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
WSG Y+G + ++ + + + G ++G+ Q +VFG+
Sbjct: 41 YDWSGFYIGANGGWGSSRSSWDYLGPGLAVGSEGSHDADGAVAGGQIGYRWQAGTWVFGL 100
Query: 107 NC-----HTTAAKDDSTFYR--LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ + S F ++ K +G + GY+ ++ L+Y GG G
Sbjct: 101 EAQGNWADLSGSNISSLFITDTIRTKVDAFGLFTGQFGYAWNNALLYVKGGAGVVSSKYD 160
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ A G + G+GL+Y + S++ Y ++ S + NA
Sbjct: 161 AFTTATG----AALGSANSTRWGGTAGVGLEYGFAPNWSVAVEYDHVWLDTKSADFYNAG 216
Query: 220 SDVERVDRKGNAHIASLGINM 240
+ V + + + + + +N
Sbjct: 217 AYVGTDNIRQDLDLVTARLNY 237
>gi|256113236|ref|ZP_05454104.1| OmpA-like transmembrane domain protein [Brucella melitensis bv. 3
str. Ether]
gi|265994648|ref|ZP_06107205.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765761|gb|EEZ11550.1| outer-membrane immunogenic protein [Brucella melitensis bv. 3 str.
Ether]
Length = 213
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIVGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRNKLDTQDFRVGIGYKF 213
>gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 222
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 44 TYNDPVAAGPHDWSGNYVGARVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 96
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 97 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 150
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 151 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 201
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 202 GIEQRNNLKN-HSIKAGLNYKF 222
>gi|192293657|ref|YP_001994262.1| hypothetical protein Rpal_5301 [Rhodopseudomonas palustris TIE-1]
gi|192287406|gb|ACF03787.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 561
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 69/223 (30%), Gaps = 32/223 (14%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL---GIELGHNIQLE-DFV 103
W+G Y G H+ + + +D Y + + GI++G+N Q +++
Sbjct: 33 APVSWNWTGLYWGAHVGGSFGSSSFSDPAGPALYGGSVRSPAALAGIQIGYNYQPNANWL 92
Query: 104 FGINCHTTAAKDDSTFYRLKEKY-----------FIYGDVVLKAGYSVD---SLLIYGMG 149
G+ ++ T + + +AG+ L+Y G
Sbjct: 93 IGVEADLSSMNAKGTNTCMASSGLFISSNCRVRQDALATLTGRAGFVAGPGGRTLLYAKG 152
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G S + + +G G++ + S+ Y Y
Sbjct: 153 GAAF----LSERLDIAVGYPLGNSTDVNDGRWGWTVGAGIERALAPAWSVKLEYNYADFG 208
Query: 210 IHSVNNSNAKSDVERV----------DRKGNAHIASLGINMHF 242
+ +++ V V + + H +G+N+ F
Sbjct: 209 SRDMATPDSERLVPGVGSFATPQGRSRVEQDLHAVKVGLNLKF 251
>gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33]
gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae]
gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33]
Length = 212
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGLHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|15964926|ref|NP_385279.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|307300997|ref|ZP_07580766.1| porin [Sinorhizobium meliloti BL225C]
gi|15074105|emb|CAC45752.1| Probable outer membrane protein [Sinorhizobium meliloti 1021]
gi|306903952|gb|EFN34538.1| porin [Sinorhizobium meliloti BL225C]
Length = 212
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 71/198 (35%), Gaps = 22/198 (11%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
EY + WSG YVG I + + N + G G+ G+N+Q V+
Sbjct: 37 EYTEPAVRNWSGAYVGGTIDWHHG------EADATGNNKSVGFGGGLYGGYNVQDGQMVY 90
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
G +DS + K + G V + G ++ +L+YG G S+
Sbjct: 91 GGEADVNYTGNDSRSSGRRVKQGVNGSVRGRVGVDLNPVLVYGTAGVALGNAKLSTPAGS 150
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ G+G + V +I+ A YRY + + + ++
Sbjct: 151 DDKTL-----------VGWTAGVGAETFVTDNITARAEYRYTDY-----GSKDFRAGGST 194
Query: 225 VDRKGNAHIASLGINMHF 242
+ + H LG+ + F
Sbjct: 195 ISSGYDEHSVKLGMGVKF 212
>gi|12620707|gb|AAG60983.1|AF322013_102 ID693 [Bradyrhizobium japonicum]
Length = 325
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 17/202 (8%)
Query: 50 EYGIWSGNYVGLHIS--RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
WSG Y+G + + + +NS +G ++G+ Q+ + V+G+
Sbjct: 126 PIIDWSGYYMGANGGWGTSHNCWDFNGITSEGCHNSTGGT-VGGQIGYRWQIFNMVYGLE 184
Query: 108 CHTT-----AAKDDSTF--YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
+ + F + +G + GY+ +++L+YG GG S+
Sbjct: 185 GQGNWADFRGSNVSTAFPTDTVGTTTDAFGLLTGHIGYAFNAVLLYGKGGAAVT----SN 240
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
V S + G+ + VLG G + + + S Y H +N + +
Sbjct: 241 TYYVNSVATGTELGKNNDVRWGGVLGAGAEVSLTPNWSAGVEY---NHLFMQRSNISFPA 297
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ + + + +N F
Sbjct: 298 ALGADRAHQDVDLITARLNYKF 319
>gi|31322670|gb|AAP22071.1| outer membrane protein [Sinorhizobium fredii]
Length = 212
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 22/198 (11%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
EY D WSG YVG + + + N+ G G+ G+N+Q V+
Sbjct: 37 EYTDPAVKNWSGAYVGGTANWHHG------EADATGGNTSAGFGGGLYGGYNVQDGQMVY 90
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
G A +DS + K + G V + G ++ +L+YG G S+
Sbjct: 91 GGEADVNYAGNDSHSSGRRVKQGVNGSVRGRVGVDLNPVLVYGTAGLALGNAKLSTPAGS 150
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ G G + V +++ YRY + + + ++
Sbjct: 151 DDKTL-----------VGWTAGAGAETFVTDNVTARVEYRYTDYA-----SKDFRTGGST 194
Query: 225 VDRKGNAHIASLGINMHF 242
V + H LG+ + F
Sbjct: 195 VSSGYDEHSVKLGMGVKF 212
>gi|148258659|ref|YP_001243244.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1]
gi|146410832|gb|ABQ39338.1| putative outer membrane protein with ompA domain [Bradyrhizobium
sp. BTAi1]
Length = 662
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 55/202 (27%), Gaps = 25/202 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLA---DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGIN 107
WSG YVG H + + + G++ G+N + G
Sbjct: 42 FDWSGIYVGAHAGYTRDHAQASLIDPIGGAGAGSRFSGLTGGVQAGYNWVTRSGLLLGFE 101
Query: 108 CHTTAAKDDSTFYRL----------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ ++ + + E + + GY+ L+Y GG A+
Sbjct: 102 GDFSFPNSLTSNHTVAMLNRPGSSVSELWDYVASARGRIGYAQGDWLVYATGGL--AWTG 159
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + + + G G++ S Y Y V SN
Sbjct: 160 GRFI-----NTTAAGDEKLLTTRVGWTAGAGIERAFAPHWSWRLEYLYSQFENGGVRFSN 214
Query: 218 AKSDVERVDRKGNAHIASLGIN 239
S +G+N
Sbjct: 215 GASYTS----TLEFQTLRVGLN 232
>gi|90424253|ref|YP_532623.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
gi|90106267|gb|ABD88304.1| putative outer membrane protein [Rhodopseudomonas palustris BisB18]
Length = 247
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 69/203 (33%), Gaps = 19/203 (9%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNN--VEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++ +A+ L P Y Y WSG Y+G + D
Sbjct: 5 LLGTVGVVALGLAAPAVAADLPARTYTKAPAYVAAVY-DWSGFYIGANAGWGNSRDSRFD 63
Query: 75 TINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDSTF-------YRLKEK 125
+ +G G ++G+ Q +VFG+ A RL K
Sbjct: 64 ETFGLDLGAHDADGAVAGGQIGYRWQTGTWVFGLEAQGDWADLSGNHLNPLVFDNRLSSK 123
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV-- 183
+G + GY+ ++ L+Y GG A V D + S A G+ +
Sbjct: 124 TDAFGLFTGQIGYAWNNALLYVKGG---AAVTDRKYDFTVD--STGAPISSTGYKTRWSG 178
Query: 184 VLGIGLDYMVNYDISLSASYRYI 206
+G+GL+Y + S Y +I
Sbjct: 179 TVGVGLEYGFAPNWSFGVEYDHI 201
>gi|148255736|ref|YP_001240321.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407909|gb|ABQ36415.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 248
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 24/205 (11%)
Query: 54 WSGNYVGLHISRLY--ETHPLADTINRKTYNSLLPNGL-----GIELGHNIQLEDFVFGI 106
W+G Y+GL + + N + + G +G+N Q+++ VFG+
Sbjct: 44 WTGFYIGLQGGGGWGRSDETFFNAPNGFGFAGTQRYDINGGFAGGVIGYNWQVDNIVFGL 103
Query: 107 NCHTTAAKDDSTFYRLKEKYF--------IYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
A + + +GD+ + G++ L + GG
Sbjct: 104 EGDYHWADINGRSGVITAGLGDSYFTKLRGFGDIKGRLGWAAGPALFFVSGG-------- 155
Query: 159 SSLEKVESDNSKNAKGRF-DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+++ ++ A + +G G +YM + S Y Y+ ++ +N
Sbjct: 156 AAVGDLQHRYDNPAFSTIQNDWRWGWTIGAGAEYMFAPNWSAKVEYNYLDFGKSTLQYNN 215
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
R + H GI+ HF
Sbjct: 216 PLVASNRSEWSDTVHTVKAGISYHF 240
>gi|296444331|ref|ZP_06886296.1| porin [Methylosinus trichosporium OB3b]
gi|296257978|gb|EFH05040.1| porin [Methylosinus trichosporium OB3b]
Length = 277
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 62/194 (31%), Gaps = 34/194 (17%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYET------HPLADTINRKTYNSLLPNGLGIE 92
+ W+G YVGL++ + T + N S G++
Sbjct: 26 SRKEAPVFVPPPVFSWTGPYVGLNLGGSWITRNNDWNNWGGWGWNNNNSGSNGGVSGGLQ 85
Query: 93 LGHNIQLED-FVFGINCHTTAAKDDSTFYRLK------------------EKYFIYGDVV 133
+G+N QL FV G+ E+ +G V
Sbjct: 86 IGYNYQLSPMFVVGLETDFQGTSIGGGNNNNNWWGYGGVGWSNWWNNNNNERVPWFGTVR 145
Query: 134 LKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ G ++ LLIYG GGFG V + L N+ + + G G+++
Sbjct: 146 GRLGVALLDSRLLIYGTGGFGYGEVNRNDLFSWWGGNNGQLR-------TGWTAGGGIEW 198
Query: 192 MVNYDISLSASYRY 205
+ S Y Y
Sbjct: 199 AFLPNWSAKIEYLY 212
>gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
B2/94]
gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99]
gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94]
gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99]
gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis]
gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti]
gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti]
gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94]
gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99]
Length = 212
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGPHDWSGNYVGARVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str.
9-941]
gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus
2308]
gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str.
870]
gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str.
Tulya]
gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str.
292]
gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str.
C68]
gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus]
gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus]
gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus
2308]
gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038]
gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
Length = 212
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----SGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|316936292|ref|YP_004111274.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1]
gi|315604006|gb|ADU46541.1| hypothetical protein Rpdx1_5001 [Rhodopseudomonas palustris DX-1]
Length = 561
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 79/255 (30%), Gaps = 34/255 (13%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
I+V +LA + D+ W+G Y G+H+ + + +D
Sbjct: 3 RILVTAAALATVISPAAAADMPGFPPLMPAA--PVQWNWTGLYWGVHVGGSFGSSSFSDP 60
Query: 76 INRKTYNSLLPNGL---GIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKY----- 126
Y + + GI++G+N Q +++ G+ ++ T +
Sbjct: 61 AGPGLYGGNVRSPAALAGIQVGYNYQPNANWLIGVEADLSSMNAKGTDTCMASSGLFISS 120
Query: 127 ------FIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ +AG L+Y GG S + + N +
Sbjct: 121 NCRVRQDALATLTGRAGLVTGPGGRTLLYAKGGAAF----LSERLDITTGNPLGNSTDTN 176
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV----------DR 227
+G G++ + S+ Y Y + ++ V V
Sbjct: 177 DGRWGWTVGAGIERALAPAWSVKLEYGYADFGSRDMATPSSFRLVPGVGYFPTPQGTSKV 236
Query: 228 KGNAHIASLGINMHF 242
+ + H +G+N+ F
Sbjct: 237 EQDLHAVKVGLNLKF 251
>gi|192292615|ref|YP_001993220.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
gi|192286364|gb|ACF02745.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
TIE-1]
Length = 670
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 63/215 (29%), Gaps = 29/215 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYN-----------SLLPNGLGIELGHNIQ 98
WSG Y+G H S + + T + + +G++ G+N
Sbjct: 35 AVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQAGYNWM 94
Query: 99 L-EDFVFGINCHTTAAKD----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
L ++ GI + T + + G V + GY+ D L Y
Sbjct: 95 LPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAFDGWLPYV 154
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GF +Y + A G G+D ++ S A Y
Sbjct: 155 TAGFAWSYDRLRWPPDPSLAQQETALL----WRLGWAAGAGVDVPLSPAWSARAEYLATG 210
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V+ A V H LG+N
Sbjct: 211 FGSGTVSFPIAGQSVSSDVLT---HAVRLGLNYRL 242
>gi|86751789|ref|YP_488285.1| hypothetical protein RPB_4691 [Rhodopseudomonas palustris HaA2]
gi|86574817|gb|ABD09374.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 562
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 67/223 (30%), Gaps = 32/223 (14%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL---GIELGHNIQLE-DFV 103
W+G Y G H+ + +D Y + + GI+LG+N Q +++
Sbjct: 32 APVQWSWTGLYWGAHLGGSFGQTSFSDPAGPGLYGGQVRSPAALAGIQLGYNYQPNRNWL 91
Query: 104 FGINCHTTAAKDDSTFYRLKEKY-----------FIYGDVVLKAGYSVD---SLLIYGMG 149
G+ +A + T L + +AG+ L+Y
Sbjct: 92 IGVEADVSAMNGNGTQSCLVSSGLFISANCRVRQDALATLTGRAGFVTGPGGRTLLYAKA 151
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G S + N + G G++ + S+ Y Y
Sbjct: 152 GAAF----LSERLDITIGNPIGSSTESTDGRWGWTAGAGIERALAPAWSVKFEYDYANFG 207
Query: 210 IHSVNNSNAKSDVERVD----------RKGNAHIASLGINMHF 242
+ ++ V VD + H +G+N+ F
Sbjct: 208 SRDMATPSSYRLVPGVDYFATPQGVSKVSQDLHAVKVGLNLKF 250
>gi|39936789|ref|NP_949065.1| hypothetical protein RPA3728 [Rhodopseudomonas palustris CGA009]
gi|39650646|emb|CAE29169.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 670
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 63/215 (29%), Gaps = 29/215 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYN-----------SLLPNGLGIELGHNIQ 98
WSG Y+G H S + + T + + +G++ G+N
Sbjct: 35 AVFDWSGFYIGAHFSAVAGHSNWSSTPAGGSGSIDLFDAFQLFKGTGSYVIGLQAGYNWM 94
Query: 99 L-EDFVFGINCHTTAAKD----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
L ++ GI + T + + G V + GY+ D L Y
Sbjct: 95 LPSRWLIGIEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRVGYAFDGWLPYV 154
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GF +Y + A G G+D ++ S A Y
Sbjct: 155 TAGFAWSYDRLRWPPDPSLAQQETALL----WRLGWAAGAGVDVPLSPAWSARAEYLATG 210
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V+ A V H LG+N
Sbjct: 211 FGSGTVSFPIAGQSVSSDVLT---HAVRLGLNYRL 242
>gi|307942791|ref|ZP_07658136.1| porin [Roseibium sp. TrichSKD4]
gi|307773587|gb|EFO32803.1| porin [Roseibium sp. TrichSKD4]
Length = 183
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 67/196 (34%), Gaps = 19/196 (9%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+ E W G Y+G H + D + SL G G+N F+ G+
Sbjct: 6 EPETNSWQGFYIGGHFGYNWMN-GQDDLDDGIGTTSLSSVIGGFHAGYNHMFGQFLLGVE 64
Query: 108 CHTTAAK-DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ + T L ++AGY+ + L Y G A
Sbjct: 65 AEGNLSDLNGQTAGGLDASSNWMIAGRVRAGYAFEHFLAYATAGVSMA------------ 112
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D S + + + +V+G GL+ V +IS Y++ H +N + ++
Sbjct: 113 DASLSGTKKSSNTHTGLVVGGGLEAFVTQNISARLEYQH-----HWLNEQSYNTNNTDYK 167
Query: 227 RKGNAHIASLGINMHF 242
I G++ HF
Sbjct: 168 VDAELDIVRAGLSYHF 183
>gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
Length = 212
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYSDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
Length = 212
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYSDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|307317731|ref|ZP_07597169.1| porin [Sinorhizobium meliloti AK83]
gi|306896493|gb|EFN27241.1| porin [Sinorhizobium meliloti AK83]
Length = 212
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 22/198 (11%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
EY + WSG YVG I + + N + G G+ G+++Q V+
Sbjct: 37 EYTEPAVRNWSGAYVGGTIDWHHG------EADATGNNKSVGFGGGLYGGYDVQDGQMVY 90
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
G +DS + K + G V + G ++ +L+YG G S+
Sbjct: 91 GGEADVNYTGNDSRSSGRRVKQGVNGSVRGRVGVDLNPVLVYGTAGVALGNAKLSTPAGS 150
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ G+G + V +I+ A YRY + + + ++
Sbjct: 151 DDKTL-----------VGWTAGVGAETFVTDNITARAEYRYTDY-----GSKDFRAGGST 194
Query: 225 VDRKGNAHIASLGINMHF 242
+ + H LG+ + F
Sbjct: 195 ISSGYDEHSVKLGMGVKF 212
>gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188]
gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 212
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 81/231 (35%), Gaps = 27/231 (11%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYG---IWSGNYVGLHISRLYETHPL 72
SI A+ + + Y D WSGNYVG + P
Sbjct: 5 SITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVAAGPHDWSGNYVGAQVGASSSRVP- 63
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD-STFYRLKEKYFIYGD 131
NR G+ +G N+Q + VFG A+ + + G+
Sbjct: 64 GPFTNRTGALG------GVVVGKNMQSGNVVFGGELEGNFAEAEHRIGNGGSLQQSWNGN 117
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
K GY+ D L+YG G+G DN+ +A G ++G G++
Sbjct: 118 AKGKVGYAFDKTLVYGTAGYGVT-------RFKAKDNTTSA----PGWEGGALVGAGVEQ 166
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ +S+ A Y + + + + VE+ + N H G+N F
Sbjct: 167 ALSGPLSVKAEYDF----QRFNDVKSRVNGVEQRNNLKN-HSIKAGLNYKF 212
>gi|769745|emb|CAA55872.1| immunogenic protein [Brucella abortus]
gi|89741444|gb|ABD77595.1| 25 kDa outer membrane protein [Brucella abortus]
Length = 213
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 20/226 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLGARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + N N V K + +GI F
Sbjct: 173 ILGRVEYRYTQY-----GNKNYDLAGTTVRNKLDTQDIRVGIGYKF 213
>gi|323137959|ref|ZP_08073033.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC
49242]
gi|322396678|gb|EFX99205.1| hypothetical protein Met49242DRAFT_2421 [Methylocystis sp. ATCC
49242]
Length = 837
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/233 (17%), Positives = 73/233 (31%), Gaps = 44/233 (18%)
Query: 54 WSGNYVGLHISRLYETHPLA-----------------DTINRKTYNSLLPNGLGIELGHN 96
W+ YVGL+ + + T N L G++LG N
Sbjct: 593 WTDVYVGLNGGGAWSSPTSNVQVVGVGPAPASLPVAFSAAPTDTGNHLAGFIGGLQLGAN 652
Query: 97 IQL-EDFVFGINCHTTAAKDDS--------------TFYRLKEKY---FIYGDVVLKAGY 138
+F+ G+ ++ TF +++ G V + GY
Sbjct: 653 WNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLNYLGTVRGRLGY 712
Query: 139 -SVDSLLIYGMGGFGGAYVIDSSLEK---VESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ +LL+YG GG V+ ++ V + F G G+++M
Sbjct: 713 LATPTLLVYGTGGMAYGGVVSNTAIFTRRVGGTSQTQVNPVFQDTLVGWSAGGGVEWMFL 772
Query: 195 YDISLSASYRYIPHHIHSVNN-----SNAKSDVERVDRKGNAHIASLGINMHF 242
+ S Y + + S A + + N + G+N HF
Sbjct: 773 PNWSAKVDYLHYDLGNARASGFAAPSSGAFNYNASTSTRFNGDLVQAGVNRHF 825
>gi|316932990|ref|YP_004107972.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1]
gi|315600704|gb|ADU43239.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris DX-1]
Length = 696
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 29/215 (13%)
Query: 50 EYGIWSGNYVGLHISR--LYETHPLADTINRKT---------YNSLLPNGLGIELGHNIQ 98
WSG Y+G H S + A + + +G++ G+N
Sbjct: 61 AVFDWSGFYIGAHFSAVAGHSNWSSAPAGGSGSIDLFDAFQLFKGTGSYVVGLQAGYNWM 120
Query: 99 L-EDFVFGINCHTTAAKD----------DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
L ++ G+ + T + + G V + GY++ L Y
Sbjct: 121 LPSRWLIGVEADLNSPNTLGGNTGNTLPSGTVGGHDHQALLGGTVRGRLGYALGGWLPYV 180
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
GF +Y + A G G+D ++ S A Y
Sbjct: 181 TAGFAWSYDRLRWPPDPALAQQETALL----WRLGWSAGAGIDLPLSPAWSARAEYLATG 236
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V+ A V H LG+N
Sbjct: 237 FGNGTVSFPIAGERVTSDVLT---HAVRLGLNYRL 268
>gi|299132804|ref|ZP_07025999.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2]
gi|298592941|gb|EFI53141.1| Carbohydrate-selective porin OprB [Afipia sp. 1NLS2]
Length = 694
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 68/204 (33%), Gaps = 26/204 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL---GIELGHNIQLEDFVF-G 105
WSG YVG H + + + A + ++N+ G G++ G+N+ L V G
Sbjct: 78 PVFDWSGAYVGAHFAYGFGS-SHASVFDGASFNTRNHFGTATAGVQAGYNVVLPSRVLLG 136
Query: 106 INCHT----------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ A + L E+ G + + GY+ L+Y GG A
Sbjct: 137 VEADLSFPNYIESSGGVAVTPTMNGTLTERLDYAGSLRARLGYAAPRWLLYVTGGLAFA- 195
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
D+ K + + + G+G +Y + S Y Y + V
Sbjct: 196 GERFEYTSPAFDDKKLSLR------TGWIAGVGAEYAIGPKWSARVEYLYSDYGRDHVQL 249
Query: 216 SNAKSDVERVDRKGNAHIASLGIN 239
+ + LG+N
Sbjct: 250 GSGLQSAS----TFDVQTIRLGLN 269
>gi|319784400|ref|YP_004143876.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170288|gb|ADV13826.1| porin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 220
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 18/193 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG-IELGHNIQLEDFVFGINC 108
W+G Y GL++ + H + + +G + G+ Q E+FV+G
Sbjct: 44 PVASWAGPYAGLNVGYGFSGHTKEKDLGVDNVDVGTKGFVGSVFGGYQWQQENFVYGAEA 103
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K G + + GY+V +L+YG GG G + KVE D
Sbjct: 104 ELGYNGVKGDDSGVNSKAGFEGSLRARLGYAVTPEILLYGTGGLAGRSL------KVEDD 157
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + G+G D + ++ YRY S + + +V
Sbjct: 158 VYGSDRATL----LGWTAGLGTDIKLTDNVFGRVEYRYTDFGSKSFDG------IGKVKA 207
Query: 228 KGNAHIASLGINM 240
N +G+
Sbjct: 208 TDNRVTFGVGMKF 220
>gi|91978029|ref|YP_570688.1| carbohydrate-selective porin OprB [Rhodopseudomonas palustris
BisB5]
gi|91684485|gb|ABE40787.1| Carbohydrate-selective porin OprB [Rhodopseudomonas palustris
BisB5]
Length = 724
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 62/223 (27%), Gaps = 34/223 (15%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINR-----------KTYNSLLPNGLGIE 92
W+G Y+G H S + + LG++
Sbjct: 84 PAAGGPAVFDWNGFYIGGHFSYVAGRSDWTAQPAGVSGTIDLFDAFDAFKGTGSYTLGLQ 143
Query: 93 LGHNIQL-EDFVFGINCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVD 141
G+N+ L ++ G+ T+ + + G V + GY++D
Sbjct: 144 AGYNVLLPSRWLLGLEADLTSPNRIGGNASISPPTGTIGGHDHQTQLAGTVRGRLGYALD 203
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L Y GF +Y + + G G++ ++ +
Sbjct: 204 GWLPYATAGFAWSYDRLRWPSEAAATEETALL-----WRLGWAAGAGVELPLSPAWTARV 258
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNA--HIASLGINMHF 242
Y A+ + + +A H LG+N
Sbjct: 259 EYLATGF-----GRDTARFPIAGHQIESDALIHAVRLGLNYRL 296
>gi|146337818|ref|YP_001202866.1| putative outer membrane protein A-like (OmpA-like) [Bradyrhizobium
sp. ORS278]
gi|146190624|emb|CAL74626.1| Conserved hypothetical protein; putative outer membrane Protein
A-like (OmpA-like) [Bradyrhizobium sp. ORS278]
Length = 673
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 66/233 (28%), Gaps = 24/233 (10%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL--YETHPLADTIN- 77
+ P + W+G YVG H + + L+D
Sbjct: 21 VAGTMLAGLGPLATSVAAADLPVKARMAQTVFDWTGLYVGAHAGYTRDHASATLSDPTGV 80
Query: 78 RKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRL----------KEKY 126
+ G++ G+N + G+ + ++ + + E +
Sbjct: 81 ASAGSRFNGLTGGVQAGYNWVTRSGLLLGLEGDFSFPNYLTSNHTVAMLGTPGASVSELW 140
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+ GY+ L Y GG + + +D + N + R V G
Sbjct: 141 DYVATARGRVGYANGDWLAYATGGVAW-----TGGRFINTDPAGNTEKRLT-TRLGWVAG 194
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G++ D S Y Y V N S + + +G+N
Sbjct: 195 AGIERAFAPDWSWRLEYLYYGFENGGVRFGNGAS----YNSALDFQTLRVGLN 243
>gi|116251075|ref|YP_766913.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255723|emb|CAK06804.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|220979415|gb|ACL97989.1| outer membrane protein B2 [Rhizobium leguminosarum bv. viciae]
Length = 205
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 56/175 (32%), Gaps = 23/175 (13%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
Q WSG Y+G + + + + G+ G+N Q + V+GI
Sbjct: 36 QVSSAYDWSGFYLGAQGGYSWSQATIL-----GSDQDIDSGTSGLHAGYNFQSGNIVYGI 90
Query: 107 NCHTT--AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
K+D+ + GY+ D L + + +
Sbjct: 91 ENDFNYNFEKNDNANLEWDASG------RARVGYAWDRTLFF----------ATAGVAAG 134
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
A G+ DG G G+++ V +I + A YR+ ++ +
Sbjct: 135 GGKVDIPAAGKKDGILIGWTAGGGIEHAVTDNILVRAEYRHSDFGNKDFGSTIGE 189
>gi|27377123|ref|NP_768652.1| hypothetical protein bll2012 [Bradyrhizobium japonicum USDA 110]
gi|27350266|dbj|BAC47277.1| bll2012 [Bradyrhizobium japonicum USDA 110]
Length = 308
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 17/202 (8%)
Query: 50 EYGIWSGNYVGLHIS--RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
WSG Y+G + + + +NS +G ++G+ Q+ + V+G+
Sbjct: 109 PIIDWSGYYMGANGGWGTSHNCWDFNGITSEGCHNSTGGT-VGGQIGYRWQIFNMVYGLE 167
Query: 108 CHTT-----AAKDDSTF--YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
+ + F + +G + GY+ +++L+YG GG S+
Sbjct: 168 GQGNWADFRGSNVSTAFPTDTVGTTTDAFGLLTGHIGYAFNAVLLYGKGGAAVT----SN 223
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
V S + G+ + VLG G + + + S Y H +N + +
Sbjct: 224 TYYVNSVATGTELGKNNDVRWGGVLGAGAEVSLTPNWSAGVEY---NHLFMQRSNISFPA 280
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ + + + +N F
Sbjct: 281 ALGADRAHQDVDLITARLNYKF 302
>gi|323137952|ref|ZP_08073026.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322396671|gb|EFX99198.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 302
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 74/259 (28%), Gaps = 60/259 (23%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLY---------------------ETHPLADTINRKTYN 82
E E W+G Y+GL+ + E +
Sbjct: 33 PELPAMETTPWAGFYIGLNAGGAWNASTAVNLLSAPVFVAPGIGEEIWAATSSFAASRAL 92
Query: 83 SLLPNGL--GIELGHNIQL-EDFVFGINCHTTAAKDDS-------------------TFY 120
S G G +LG+N + E F+ G+ + T
Sbjct: 93 STQAAGFIGGGQLGYNWRFSETFIAGVEADIQGVAGGANSARNVSLLPTPAAGLSYLTTL 152
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDSSLEKVESDNSKNAK------ 173
++ G V + GY V L+ Y GG V + N
Sbjct: 153 SASKRLDYLGTVRGRIGYLVTPTLLAYATGGLAYGGVTARADFFQTIPNDTPGFELLAIN 212
Query: 174 -GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER-------- 224
GRF + +G GL++M + D SL A Y Y +
Sbjct: 213 AGRFSNTRAGWTVGGGLEWMFSSDWSLKAEYLYYDLGGVTFPTGVTTDQAFGALIMISNN 272
Query: 225 -VDRKGNAHIASLGINMHF 242
+ + HIA G+N HF
Sbjct: 273 HASTRFDGHIARAGVNYHF 291
>gi|148252036|ref|YP_001236621.1| putative 31 kDa outer-membrane immunogenic protein [Bradyrhizobium
sp. BTAi1]
gi|146404209|gb|ABQ32715.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 219
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 59/196 (30%), Gaps = 30/196 (15%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT 110
W+G Y G ++ + + + L G++ G+N Q+ FV GI
Sbjct: 45 FSWTGFYAGANVGGAFTGNDSVTNLAGGNGGKLSGVIGGMQAGYNYQVSPLFVVGIENDL 104
Query: 111 TAAKDDSTFYRLK--EKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVES 166
+ +AG+++ L +YG G + D + KV
Sbjct: 105 DFTGLSRQGDLVNPAVSVPWLTTGRARAGFTMLDQRLFLYGTAGLAAGELKDGPVHKV-- 162
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
G G ++ S Y Y ++ K D
Sbjct: 163 -------------KMGWTAGGGAEWAFLPKWSAKLEYLY----------TDLKHDALPDW 199
Query: 227 RKGNAHIASLGINMHF 242
R H +G+N HF
Sbjct: 200 RAAKIHSVRVGLNYHF 215
>gi|261218682|ref|ZP_05932963.1| outer membrane protein 25b [Brucella ceti M13/05/1]
gi|261321820|ref|ZP_05961017.1| outer membrane protein 25b [Brucella ceti M644/93/1]
gi|260923771|gb|EEX90339.1| outer membrane protein 25b [Brucella ceti M13/05/1]
gi|261294510|gb|EEX98006.1| outer membrane protein 25b [Brucella ceti M644/93/1]
Length = 229
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 21/194 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDDSTFY 120
+R + + T + P+G G+ G+N + + FV G++ T D++
Sbjct: 42 ARSVMGWGRSTLSDEDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHS 101
Query: 121 R----------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS--LEKVESDN 168
+ K G V + G ++D + Y GG V +S + +ES
Sbjct: 102 DTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSLTDGIESIG 161
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+K + G G+DY ++ + YRY + + + VE K
Sbjct: 162 VSQSKT-----MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNK 215
Query: 229 GNAHIASLGINMHF 242
H LG+ F
Sbjct: 216 FKTHDIRLGVAYKF 229
>gi|323139011|ref|ZP_08074071.1| porin [Methylocystis sp. ATCC 49242]
gi|322395765|gb|EFX98306.1| porin [Methylocystis sp. ATCC 49242]
Length = 291
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 83/278 (29%), Gaps = 51/278 (18%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
I LA+ DL + + V +W G YVGL+ + + +
Sbjct: 3 KIAFSVAVLALTAGSALAADLPSRKEAPVYVPPPPPPMWVGFYVGLNAGGTWAASTNSAS 62
Query: 76 INRKTYNSLLP-------------------NGL--GIELGHNIQL-EDFVFGINCHTTAA 113
N P +G G ++G+N Q F+ G+
Sbjct: 63 DAWGLANGGTPIHGWVAAASAASWQNGGNNSGFIGGGQIGYNWQFMNSFIAGVEADIQGV 122
Query: 114 KDDS-------------------TFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGG 153
+S TF + G V + G+ L+YG GG
Sbjct: 123 AGNSPNRDIFGSSFDPISGTNIVTFGNRSSRLDYLGTVRGRLGWLFTPTMLVYGTGGLAY 182
Query: 154 AYVIDSSL---EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
V S+ ++ + A F G G+++M + S Y Y
Sbjct: 183 GGVSTSATFVTSEIGFPFNSVASASFADTRVGWTAGGGIEWMFMPNWSAKVEYLYYDLGT 242
Query: 211 HSVNNSNAKSDV------ERVDRKGNAHIASLGINMHF 242
S + V V ++ N ++ G+N HF
Sbjct: 243 VSATAVAVEPTVVDWAYSTTVRQRFNGNMVRAGLNYHF 280
>gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1]
Length = 221
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 44 TYNDPVAAGPHDWSGNYVGARVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 96
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 97 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 150
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 151 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 201
Query: 221 DVERVDRKGNAHIASLGINM 240
+E+ + N H G+N
Sbjct: 202 GIEQRNNLKN-HSIKAGLNY 220
>gi|158425586|ref|YP_001526878.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans
ORS 571]
gi|158332475|dbj|BAF89960.1| outer membrane protein, 31 kDa precursor [Azorhizobium caulinodans
ORS 571]
Length = 232
Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 29/208 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADT-----INRKTYNSLLPNGLGIELGHNIQL-EDFV 103
W+G Y+G ++ + + + G ++G+N Q + V
Sbjct: 39 PVFSWTGFYIGANVGYAWGSTDFHGNTRTGLPYSYSVGGQDDWLGGGQIGYNYQFANNVV 98
Query: 104 FGINCHTTAAKDDSTFY---------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
GI S+ + +G V + GY+ D L Y GG
Sbjct: 99 VGIEADIDWTGIGSSGVAVNGPLAGQTINGSLDYFGTVRARLGYAFDKFLPYITGGAAWG 158
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+V ++ V + ++ +G G +Y V +I+ Y Y+
Sbjct: 159 HVDYGNIYGVGTSST----------NWGWTIGAGFEYAVTNNITAGLEYLYVDLG----G 204
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
N+ ++ +D N + +N F
Sbjct: 205 NNYLFPNLTSLDTSFNMSVLRARVNYKF 232
>gi|332717162|ref|YP_004444628.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
gi|325063847|gb|ADY67537.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
Length = 223
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 61/194 (31%), Gaps = 18/194 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
W G YVG + + T T + G+N ++ + G+
Sbjct: 47 PAFSWDGVYVGASAGYGWNRVK-STTFGVTTKHEFDGGRFSGFAGYNAEVAPSIILGVEG 105
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
A D T + + G L+AGY++D LIY G+
Sbjct: 106 DLGYAWGDKTIVTSEVSAGLNGSARLRAGYAIDRALIYTAAGYT-----------ATDSE 154
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
K G +G G+DY ++ YRY + + S
Sbjct: 155 VKAPFGEDSKVLHGWTVGAGVDYAFTNNLFGRVEYRYNDFGKATYHTGPITST-----GD 209
Query: 229 GNAHIASLGINMHF 242
+ H+ +G+ + F
Sbjct: 210 VSEHVVKVGLGVKF 223
>gi|327189607|gb|EGE56759.1| outer membrane protein [Rhizobium etli CNPAF512]
Length = 207
Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 20/191 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y G+ + + G G+N Q ++ V GI +
Sbjct: 37 FTWSGPYFGIDGGAGWLNGDFSAG-GASADEDFNGGVFGAFAGYNFQFDNIVVGIEGNIE 95
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ G V + GY+ D LIYG G+
Sbjct: 96 HNWNEEDALGADVGTDWAGAVRGRVGYAFDKALIYGAAGWAATRGYV----------DAP 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ + +G G+D+ + +I YRY + + D+ VD +
Sbjct: 146 GFDKETETFNGYTVGAGVDFAITNNIFARGEYRYNDY---------GEKDILGVDVDLDQ 196
Query: 232 HIASLGINMHF 242
H GI + F
Sbjct: 197 HELKFGIGVKF 207
>gi|146340935|ref|YP_001205983.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193741|emb|CAL77758.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 242
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 12/169 (7%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRK-TYNSLLPNGLGIELGHNIQLEDFVFGINC--- 108
WSG Y+G++ + ++ +G + G+ Q+ VFG+
Sbjct: 42 DWSGFYLGINGGYGSSRNCWTLVNGPAEGCHNATGGTVGGQFGYRWQMGQVVFGLEAQGN 101
Query: 109 --HTTAAKDDSTFYRLKEKYFI--YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
T F + + + +G + GYS L+Y GG V
Sbjct: 102 WADLTGNNVTPVFAPDRNRTKLTAFGLFTGQIGYSFGDTLLYAKGGAAVTDTRYEIFSGV 161
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ H +G G++Y S+ Y ++ +V
Sbjct: 162 INTVLAAT----TVHKWGASVGAGVEYAFAPSWSVGFEYDHLFMGNTNV 206
>gi|296447726|ref|ZP_06889642.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium
OB3b]
gi|296254758|gb|EFH01869.1| hypothetical protein MettrDRAFT_3358 [Methylosinus trichosporium
OB3b]
Length = 840
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 39/228 (17%)
Query: 54 WSGNYVGLHISRLYET---------------HPLADTINRKTYNSLLPNGL--GIELGHN 96
W+ YVGL+ + P TI N G G++ G N
Sbjct: 603 WNDVYVGLNGGGAWSNPPTDVRIWPIGAAPASPFVTTIGSPLDNGNHLAGFIGGLQAGIN 662
Query: 97 IQLEDFVFGINCHTTAAKDD-------------STFYRLKEKYFIYGDVVLKAGYSVDSL 143
Q + G+ + ST+ G + + GY
Sbjct: 663 QQAAGVLMGLEADLHGVSGNTDTRWRMGIKDAISTYASRTTTLNYLGTIRGRLGYLATPT 722
Query: 144 L-IYGMGGFGGAYVIDSSL---EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
L IYG GG VI + + ++V F +G G+++ ++ D S+
Sbjct: 723 LAIYGTGGLAYGGVISAGIISSQRVNGGALSFNFPAFQDSLLGWTVGAGVEWALSPDWSV 782
Query: 200 SASYRYIPHHIHSVNNSNAKSD-----VERVDRKGNAHIASLGINMHF 242
Y + + A+ + + + ++ G+N HF
Sbjct: 783 KIDYLRYDLGRATSSPYAAQPNRLFQYAMTTSTRFDGNLIHAGVNRHF 830
>gi|296445473|ref|ZP_06887430.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296257039|gb|EFH04109.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 210
Score = 82.2 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 69/195 (35%), Gaps = 33/195 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT 110
W+G YVGL+ ++ AD Y+ ++ G ++G+N+QL FV G+
Sbjct: 42 FSWTGAYVGLNAGGAFK----ADNGLGGDYSGVVGGG---QIGYNLQLSPLFVVGLETDF 94
Query: 111 TAAKDD-STFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+T++ + +G V + G ++ LL YG GGF V
Sbjct: 95 QGTSLSRNTWFGQQVSLPWFGTVRGRVGVTLFDSQLLAYGTGGFAYGEVK---------- 144
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ G G+++ + S Y Y +S A +
Sbjct: 145 -----APWSSDTHTGWTAGGGVEWAFLPNWSAKVEYLYTDLQNNSGWGWVAPQRAK---- 195
Query: 228 KGNAHIASLGINMHF 242
H G+N HF
Sbjct: 196 ---FHTVRAGVNYHF 207
>gi|148252997|ref|YP_001237582.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1]
gi|146405170|gb|ABQ33676.1| hypothetical protein BBta_1454 [Bradyrhizobium sp. BTAi1]
Length = 665
Score = 82.2 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 66/227 (29%), Gaps = 41/227 (18%)
Query: 52 GIWSGNYVGLH-----ISRLYETHPLADTINRKTYNSLLP-----------NGLGIELGH 95
W+G Y+G H S + PL + + LP LG++ G+
Sbjct: 12 YDWTGWYIGAHAGALRGSSSWTATPLGPGGPPVSGSFGLPLNFDFMAGTGTYVLGLQGGY 71
Query: 96 NIQLEDFV-FGINCHTTAAKDDSTF-----------------YRLKEKYFIYGDVVLKAG 137
N L V GI + D E YG V + G
Sbjct: 72 NYVLPSRVMLGIEGDVSVPNSDVVVPYSVRGGQTVISPAIGQVTYSEAVIHYGSVRGRVG 131
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS----KNAKGRFDGHGSSVVLGIGLDYMV 193
Y+ D L+YG GGF Y + + V GIG++ +
Sbjct: 132 YAFDHFLLYGTGGFAWTYDQLTRSQDASPVTGSFVPAGTLETKLLWRLGWVAGIGVEIPI 191
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ S A + + + ++ +G+N
Sbjct: 192 TGNWSAKAEFLETGFGRR---GAFFAASIDAFRSDFATQSVRVGLNY 235
>gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M163/99/10]
gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
M292/94/1]
gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1]
gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1]
gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
Length = 211
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGPHDWSGNYVGARVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYAFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----PGWEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINM 240
+E+ + N H G+N
Sbjct: 192 GIEQRNNLKN-HSIKAGLNY 210
>gi|85713978|ref|ZP_01044967.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85699104|gb|EAQ36972.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 453
Score = 81.8 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 70/214 (32%), Gaps = 35/214 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLL--PNGL--GIELGHNIQLEDFVFGINCH 109
W+G Y+G + + + PNG G ++G+N Q + VFG+
Sbjct: 242 WNGLYLGGNFGGGVGRNRTTISNPAGNLAQFNLAPNGFVGGGQIGYNWQAGNIVFGLETD 301
Query: 110 TTAAKDDS----------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ + K +G V + GY+V + + Y GGF V +
Sbjct: 302 FQGSTLEDNKACFFCVPGASVDFNSKLQWFGTVRGRLGYAVGNSMFYATGGFAYGNVQTA 361
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY-----------MVNYDISLSASYRYIPH 208
+ + F + +G G++ + + + + Y Y+
Sbjct: 362 LNTPLNN-------FSFSNTRTGYAVGGGIETPLPLVNLFGGPLFGPNWTSTTEYLYVDL 414
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S N + + HI G+N HF
Sbjct: 415 GRSSFNIGGGPNVLT---TGAQEHIFRTGLNYHF 445
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 29/206 (14%)
Query: 50 EYGIWSGNYVGLHISRLYE-THPLADTINRKTYNSLLPNGL--GIELGHNIQ----LEDF 102
W+G Y+G++ + D L P G G ++G+N Q
Sbjct: 35 PVYDWTGLYLGVNAGLGVGRNRAVHDFGPLAISTHLQPLGAVGGGQIGYNWQTNSFFGPI 94
Query: 103 VFGINCHTTAAKDDSTF------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
VFG+ A + ++ +G + G ++ Y GG+ V
Sbjct: 95 VFGVEADLQGADMTDNRTNFIGALQYNQRLNWFGTARGRVGLVNGPMMTYLTGGWAYGNV 154
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH--SVN 214
+ ++ F G S G G++ + + + Y Y+ +
Sbjct: 155 GTTVIQGGV-------PSAFGGGRSGWTWGSGVEAALGGNWTGKIEYLYLDLGNRTDFIG 207
Query: 215 NSNAKSDVERVDRKGNAHIASLGINM 240
S++ +I G+N
Sbjct: 208 GQALHSELRE-------NIFRAGLNY 226
>gi|222087507|ref|YP_002546044.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221724955|gb|ACM28111.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 204
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 12/177 (6%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y+G+H ++ + LG G+N Q + V G++ +
Sbjct: 33 FTWSGPYLGVHGGGAITKGNFKFGSGDQSED-FKGGFLGNFFGYNYQFDKVVVGVDGNID 91
Query: 112 A-AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + G V + GY+ D+LLIYG G+ A + S
Sbjct: 92 YNWNNKAVANASSVGTDWSGAVRGRVGYAFDNLLIYGAAGWTAA------RGFADVSGSG 145
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ K F S G G+DY +I A YRY + + + ++
Sbjct: 146 DGKVVF----SGWTAGTGVDYAFTNNIFARAEYRYSDFGSKELQGVKSDLTEQSINL 198
>gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457]
gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457]
gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90]
Length = 212
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----SGCEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|163759157|ref|ZP_02166243.1| outer membrane protein [Hoeflea phototrophica DFL-43]
gi|162283561|gb|EDQ33846.1| outer membrane protein [Hoeflea phototrophica DFL-43]
Length = 212
Score = 81.8 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 52/147 (35%), Gaps = 16/147 (10%)
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
N Q ++ V+G+ + D++ + + G + + GY ++ L+Y GG
Sbjct: 82 NWQSDNIVYGVEGDLGYSGADASLGGVTGEQGFNGSLRARLGYDINPFLLYATGGLAATR 141
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+S +++ G G + V +I+ YRY + + N
Sbjct: 142 AEVTSAAGSDTNT-----------HLGWTAGAGAEAFVTENITTRLEYRYTDYGSETYNL 190
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
V + H LGI M F
Sbjct: 191 GG-----TNVSSGFDDHSVRLGIGMKF 212
>gi|86358535|ref|YP_470427.1| outer membrane protein [Rhizobium etli CFN 42]
gi|86282637|gb|ABC91700.1| outer membrane protein [Rhizobium etli CFN 42]
Length = 208
Score = 81.8 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 64/192 (33%), Gaps = 21/192 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHT 110
WSG Y+G+ + + G G+N Q + V GI +
Sbjct: 37 FTWSGPYLGIDGGASWLNGDFSAG-GASDSQDFNGGVFGAFAGYNFQFDNNIVVGIEGNL 95
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
++ G V + GY+ D L+YG G+ ++ V+ S
Sbjct: 96 EYNWNEEEALGADVGTDWAGAVRGRVGYAFDRALLYGAAGWT------ATRGYVDLPGSD 149
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
F+ +G G+D+ + +I YRY + D+ VD N
Sbjct: 150 KETETFN----GYTVGAGVDFAITNNIFARGEYRYNDF---------GEKDILGVDVDLN 196
Query: 231 AHIASLGINMHF 242
H GI + F
Sbjct: 197 QHELKFGIGVKF 208
>gi|148252448|ref|YP_001237033.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146404621|gb|ABQ33127.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 243
Score = 81.4 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 69/209 (33%), Gaps = 14/209 (6%)
Query: 40 ADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
A Y Y W+G Y+G H+ + + + ++ G G+++G + Q
Sbjct: 33 ATKAPAYVAPIYN-WTGFYLGAHLGGAFSSDNNFSGLATGNNSNGRFLG-GVQVGADWQF 90
Query: 100 ED-FVFGINC-----HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+V G + G + + GY+ L+Y GG+
Sbjct: 91 APTWVIGAEGQYSWLSGNVGAAFPGGFVYTNSQRGLGSITGRFGYTWGPGLLYVKGGYAY 150
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + EKV ++ H + +G G++YM S A Y+Y +
Sbjct: 151 S----DNNEKVTLAGNQIGFATNGDHRNGWTVGAGIEYMFAPSWSAKAEYQYYNFGSATF 206
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
V + H G+N F
Sbjct: 207 TAPAG--LVPTGSFTTDDHTFKAGVNYRF 233
>gi|146340932|ref|YP_001205980.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193738|emb|CAL77755.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 250
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 16/173 (9%)
Query: 78 RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS--------TFYRLKEKYFIY 129
R N G+ +G+N Q+++ VFG+ A K +
Sbjct: 78 RYDINGGFAGGV---IGYNWQVDNIVFGLEGDYHWADISGRSTEINLGAGDTYFTKLRGF 134
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
GD+ + G++ L + GG + + ++ +G G
Sbjct: 135 GDIKGRLGWAAGPALFFVSGGAAVGDLQHRYDAGLFGPAFSASQSD---WRWGWTIGAGA 191
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+YM + S Y Y+ ++ + ++ R + H +G++ HF
Sbjct: 192 EYMFAQNWSAKVEYNYLDFGKSTLQYTPVAAN--RSEWNDTVHTVKVGVSYHF 242
>gi|27376315|ref|NP_767844.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27349455|dbj|BAC46469.1| outer-membrane immunogenic protein precursor [Bradyrhizobium
japonicum USDA 110]
Length = 241
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 68/206 (33%), Gaps = 17/206 (8%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG-IELGHNIQLED- 101
Y Y W+G Y+G H+ + + + T N+ LG +++G + Q
Sbjct: 36 PAYVAPIYN-WTGFYLGAHVGGAFSSD--NNFNGLSTGNNGNGRFLGGVQVGADWQFNPN 92
Query: 102 FVFGINC-----HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FV G+ + G + + GY+ L+Y GG+ +
Sbjct: 93 FVVGVEGQYSWLSGSVGAVFPGGVAYTNDQRGLGSITGRVGYTWGPGLLYVKGGYAYS-- 150
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ EKV H + +G GL+YM + S A Y+Y
Sbjct: 151 --DNNEKVTVGGVPTGFIIDGDHRNGYTVGAGLEYMFAPNWSAKAEYQYYNFGDAHFTAG 208
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + H G+N F
Sbjct: 209 PLAGT---GNFTTDDHTFKAGVNYRF 231
>gi|92116045|ref|YP_575774.1| carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14]
gi|91798939|gb|ABE61314.1| Carbohydrate-selective porin OprB [Nitrobacter hamburgensis X14]
Length = 692
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 74/236 (31%), Gaps = 23/236 (9%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY--ETHPLAD 74
++ A+ L + + W+G Y G H T L D
Sbjct: 37 VLAGVALSALALGGSAVAADVGASLLPTKAMPRPVIDWTGLYFGAHAGFGGGRSTATLVD 96
Query: 75 TINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTA----------AKDDSTFYRLK 123
+ N G++ G+NIQL + G+ + +K + +
Sbjct: 97 PASTTGRNDYGGIISGVQAGYNIQLPSGLLLGLEADISFPNYIESNSDVSKLATARSAVT 156
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+++ G + GY+ L Y GG A+ + L + S + + A
Sbjct: 157 QQWDFIGSARGRIGYATGPWLTYASGGL--AFAGERYLNDLPSGDQEKALD----MRLGW 210
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G GL+Y S Y Y +V +A + H +G+N
Sbjct: 211 AAGAGLEYAFTPSWSARLEYLYYRFDKTNVQFPSAAQYAA----TMDMHSIRVGLN 262
>gi|323139111|ref|ZP_08074169.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC
49242]
gi|322395675|gb|EFX98218.1| hypothetical protein Met49242DRAFT_3557 [Methylocystis sp. ATCC
49242]
Length = 837
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 70/233 (30%), Gaps = 44/233 (18%)
Query: 54 WSGNYVGLHISRLYETHPLA-----------------DTINRKTYNSLLPNGLGIELGHN 96
W+ YVGL+ + + T N L G++LG N
Sbjct: 593 WTDVYVGLNGGGAWSSPASNVQVVGVGPAPASLPVAFSAAPIDTGNHLAGFIGGLQLGAN 652
Query: 97 IQL-EDFVFGINCHTTAAKDDS--------------TFYRLKEKY---FIYGDVVLKAGY 138
+F+ G+ ++ TF +++ G V + GY
Sbjct: 653 WNFSGNFLAGVETDLHGVSGNTDTKWQLTSANGGGDTFLTYEQRTATLNYLGTVRGRLGY 712
Query: 139 SVDSLLI-YGMGGFGGAYVIDSSLEK---VESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
L+ YG GG V+ ++ + + F G G+++M
Sbjct: 713 LATPTLVVYGTGGMAYGGVVSNTAIFTRRIGGTSQTQVNPVFQDTLVGWSAGGGVEWMFL 772
Query: 195 YDISLSASYRYIPHHIHSVNN-----SNAKSDVERVDRKGNAHIASLGINMHF 242
+ S Y + + S A + + N + G+N HF
Sbjct: 773 PNWSAKVDYLHYDLGNARASGFAAPSSGAFNYNASTSTRFNGDLVQAGVNRHF 825
>gi|296445833|ref|ZP_06887785.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256661|gb|EFH03736.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 277
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 67/227 (29%), Gaps = 41/227 (18%)
Query: 53 IWSGNYVGLHISRLYET------------------HPLADTINRKTYNSLLPNGLGIELG 94
+W+G YVGL+ + L S G ++G
Sbjct: 43 MWTGFYVGLNAGYGWTNNNTVTQSYADTGSAGFGAQALGGNFPWNASVSNDGFIGGGQIG 102
Query: 95 HNIQL-EDFVFGINCHTTAAKDD---------STFYRLKEKYFIYGDVVLKAGYSVDSLL 144
+N Q+ FV G+ D + + G V + GY V L
Sbjct: 103 YNAQVYNSFVVGLEADMQGVASDRQAASYYGPTASASISRSLDYLGTVRGRVGYLVTPTL 162
Query: 145 I-YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+ Y GG S + F +G G +++ S A Y
Sbjct: 163 LAYATGGLAYGQANLSGAYY----GTATGSDSFSDTRVGYSVGGGFEWLFMPHWSAKAEY 218
Query: 204 RYIPHHIHS--------VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + A++ + + + H+ G+N HF
Sbjct: 219 LYYDLGNATTPGASFAYTDGAGAQNSWAQSTARFDGHVVRAGVNYHF 265
>gi|241203671|ref|YP_002974767.1| hypothetical protein Rleg_0932 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857561|gb|ACS55228.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 205
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 23/170 (13%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
WSG Y+G + + + + G+ G+N Q + V+GI
Sbjct: 40 AYDWSGFYLGAQGGYSWSQAKIL-----GSDQDIDSGTSGLHAGYNFQSGNIVYGIENDF 94
Query: 111 T--AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
K+D+ + GY+ D L + + +
Sbjct: 95 NYNFEKNDNANLEWDASG------RARVGYAWDRTLFF----------ATAGVAAGGGKV 138
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+A G+ DG G G+++ V +I + YR+ ++
Sbjct: 139 DISAAGKKDGILIGWTAGGGIEHAVTDNILVRGEYRHSDFGNKDFGSTIG 188
>gi|323137480|ref|ZP_08072557.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
gi|322397106|gb|EFX99630.1| Carbohydrate-selective porin OprB [Methylocystis sp. ATCC 49242]
Length = 722
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 72/256 (28%), Gaps = 66/256 (25%)
Query: 49 DEYGIWSGNYVGLHISRLY----------ETHPLADTINRKTYNSLLPNGL--------- 89
W+G Y G + + TI ++L +G+
Sbjct: 41 PSVFTWTGLYAGANFGHAWASKNAIGLRSTNLVDLTTIGFGPASALSASGVADARLNGLF 100
Query: 90 -GIELGHNIQLE-DFVFGINCHTTAAKDD-------------------STFYRLKEKYFI 128
G ++G+N Q FV G+ A D T L+
Sbjct: 101 AGGQVGYNWQFAKQFVVGVEADIQGASVDGGGGLANVAAARLAPPAWAVTSASLRRNLEY 160
Query: 129 YGDVVLKAGYSVD-SLLIYGMGGFGGAYV--------IDSSLEKVESDNSKNAKGRFDGH 179
+ + GY+ +LL+Y GG +S + +++ G
Sbjct: 161 IATLRGRFGYAATPTLLLYATGGIAHGRARAGIELEQSLTSSDFDDAEVEGEHYGNL--- 217
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS-------------DVERVD 226
V+G GL+ +S Y Y + V R+
Sbjct: 218 -MGFVIGGGLEAAFGRHVSGKLEYLYYDLGTLRLGTPRIDRLAYFNSASMIDLLAVTRLS 276
Query: 227 RKGNAHIASLGINMHF 242
+ N H+ G+N F
Sbjct: 277 TRFNGHLLRAGVNYRF 292
>gi|13476553|ref|NP_108123.1| outer membrane protein [Mesorhizobium loti MAFF303099]
gi|14027314|dbj|BAB54268.1| outer membrane protein [Mesorhizobium loti MAFF303099]
Length = 218
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 20/193 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTIN-RKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
W+G Y GL++ + + + + G G+ Q E+FV+G
Sbjct: 44 PVASWAGPYAGLNVGYGFSGRTKEKDFDVSTDTKGFVGSVFG---GYQWQQENFVYGGEA 100
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESD 167
+ K G + + GY+V +L+YG GG G + SD
Sbjct: 101 ELGYNGVKGDDNGINSKAGFEGSLRARLGYAVTPEILLYGTGGLAGRSLKVEDTVLGVSD 160
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ G+G D + ++ YRY S + + +V
Sbjct: 161 RAT---------MLGWTAGVGTDIKLTDNVFGRVEYRYTDFGSKSFDG------IGKVKA 205
Query: 228 KGNAHIASLGINM 240
N +G+
Sbjct: 206 TDNRVTFGVGMKF 218
>gi|296446453|ref|ZP_06888397.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296256088|gb|EFH03171.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 210
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 64/201 (31%), Gaps = 45/201 (22%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGI 106
WSG Y GL++ + L +G+ G +LG+N +L FV G+
Sbjct: 36 PAYAWSGVYAGLNLGAGLSA------------SGLDRSGILGGGQLGYNYRLGPLFVVGL 83
Query: 107 NCHTTAAKDDSTFYRL---KEKYFIYGDVVLKAGYS--VDSLLIYGMGGFGGAYVIDSSL 161
R ++ +G + G D LL +G GG+ + D
Sbjct: 84 ETDFQGTSLGGDSGRYGFPSPRFDWFGTARGRVGVLPFSDHLLFFGTGGYAYGHDGDRMH 143
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ G GL++ D S+ A Y Y + +
Sbjct: 144 D-------------------GWTAGGGLEWAFARDWSVKAEYLYTDF------GAGGQPR 178
Query: 222 VERVDRKGNAHIASLGINMHF 242
R + H G+N HF
Sbjct: 179 FPAPRRVDDFHFMRAGVNYHF 199
>gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
str. 16M]
Length = 185
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 7 TYNDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 59
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 60 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVT------ 113
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 114 -RFKAKDNTTSA----SGCEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 164
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 165 GIEQRNNLKN-HSIKAGLNYKF 185
>gi|169825359|ref|YP_001691252.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
gi|168199281|gb|ACA21227.1| hypothetical protein M446_7000 [Methylobacterium sp. 4-46]
Length = 583
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 89/265 (33%), Gaps = 38/265 (14%)
Query: 10 FFVVFLSIV-VPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
+++++L IV + + A DL P+ V W+G Y G+
Sbjct: 7 YYLLYLPIVGLGFAASAADL--PQLTPPMMAFAPLVT----PSFTWTGPYAGVFFGYGSL 60
Query: 69 THPLAD--TINRKTYNSLLPNGL-------GIELGHNIQLED---FVFGINCHTTAAK-- 114
R L G G E+G+N+Q V G +
Sbjct: 61 DESGTGRCIGPRCVRLPALSPGARAADLSAGSEVGYNLQASPGSGLVIGAAVDYQTTRLR 120
Query: 115 ---------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV-ID 158
D + FY L ++ +G V KAGY+ D L +YG GG YV ID
Sbjct: 121 GYGESILVREVDENSDFAAFYHLGQRLDTFGAVRGKAGYAFDRLFVYGTGGLAYGYVRID 180
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
D A+G G G G +Y ++ +S+ A Y +V+ A
Sbjct: 181 VGTALTVGDRQFAAQGLTSGFRLGYAAGGGAEYAISPHLSVKAEGLYYDLGQRTVSIQAA 240
Query: 219 -KSDVERVDRKGNAHIASLGINMHF 242
V + +A +N F
Sbjct: 241 LPRSVYGGTIATHGFLARASLNYRF 265
>gi|260469600|ref|ZP_05813765.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|259028626|gb|EEW29937.1| OmpA domain protein transmembrane region-containing protein
[Mesorhizobium opportunistum WSM2075]
Length = 217
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 19/192 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
W+G Y G+++ + + + G+ Q E+FV+G
Sbjct: 44 PVASWAGPYAGINLGYGFSGR--TKEKDLGFETDTKGFVGSVFGGYQWQQENFVYGGEAE 101
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ K G + + GY+V +L+YG GG G + KVE D
Sbjct: 102 LGYNGVKGDDNGVHSKGGFEGSLRARLGYAVTPEILLYGTGGLAGRSL------KVEDDT 155
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
G G+G D + ++ YRY S +N + +V
Sbjct: 156 ----FGSDTATMLGWTAGLGTDIKLTDNVFGRVEYRYTDFGSKSFDN------IGKVKAT 205
Query: 229 GNAHIASLGINM 240
N LG+
Sbjct: 206 DNRVTFGLGMKF 217
>gi|319408049|emb|CBI81703.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 274
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 83/280 (29%), Gaps = 60/280 (21%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
V+ SI + A + W+G Y+G I
Sbjct: 6 VITASIFALVSASAAQ--AADMPVQERPTTVLPQVVVAPAFSWTGFYLGGQIGGFSSNSS 63
Query: 72 LADTIN--------RKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT--TAAKDDSTFY 120
T K + G+ G N+ + FV G++ + AK ++
Sbjct: 64 WVRTSGDIQGILGHNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWSGAKAKASRS 123
Query: 121 RLKEKYF------------------------------------IYGDVVLKAGYSVDSLL 144
L+ G ++ G++ D ++
Sbjct: 124 SLRTGNGARLAARAGVSTRAPALFEGTDNNASRVTESVTFSDKWSGATRVRLGFAFDRIM 183
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDISLSAS 202
Y GG AY ++ E + + G + LG G+D+ + + L A
Sbjct: 184 PYVAGGI--AYSQIKAVVAEERQGVETVIEQLSGSKTLVGYTLGAGVDFAMTDSVILRAE 241
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY S ++NA+ D++ D +G+ F
Sbjct: 242 YRYSDFGKKSFISNNAEIDLKTND-------FRVGVAYKF 274
>gi|150396648|ref|YP_001327115.1| porin [Sinorhizobium medicae WSM419]
gi|150028163|gb|ABR60280.1| porin [Sinorhizobium medicae WSM419]
Length = 215
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 51/153 (33%), Gaps = 15/153 (9%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE----KYFIY 129
LG G+N Q D+V G+ + +D T +
Sbjct: 61 SVPGGGGSKRFSGGLLGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGTNTDVGTDVS 120
Query: 130 GDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G V + GY+V D L+Y GG+ + V+ + K F+ +G G
Sbjct: 121 GSVRARLGYTVNDRTLLYATGGWA------VTRGFVDVAGAPKEKETFN----GWTIGGG 170
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+DY + A YRY V + D
Sbjct: 171 VDYGFTDSVFGRAEYRYNDFSDKDVGGVDVDLD 203
>gi|154246283|ref|YP_001417241.1| porin [Xanthobacter autotrophicus Py2]
gi|154160368|gb|ABS67584.1| porin [Xanthobacter autotrophicus Py2]
Length = 236
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 32/202 (15%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHT 110
W+G Y+G + + + + G + G+N Q + V GI
Sbjct: 56 FSWTGFYIGGNAGYGWGSGQDELGVAGVDPKGWFGGG---QAGYNYQFSNNIVAGIEADI 112
Query: 111 TAAKDDST----------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
++ L +G V + GY+ +L Y GGF ++S
Sbjct: 113 QGGDIGASASGPLGGQLGVLGLSSTLDSFGTVRGRLGYAFGPILPYVTGGFAW---GNNS 169
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
++ + + S+ + G G++Y + + Y Y + A +
Sbjct: 170 IDYLGASQSQTH--------TGWTAGAGIEYALTDHWTAKTEYLYTDLGSKFYDTLGASA 221
Query: 221 DVERVDRKGNAHIASLGINMHF 242
V A A +GIN F
Sbjct: 222 GVT-------AQTARIGINYKF 236
>gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str.
Ether]
gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
Length = 212
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 27/202 (13%)
Query: 45 EYQDDEYG---IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED 101
Y D WSGNYVG + P + S GI +G N+Q +
Sbjct: 34 TYYDPVAAGPHDWSGNYVGAQVGGSSSKFPSP-------FASRTGALGGIVVGKNMQNGN 86
Query: 102 FVFGINCHTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
VFG A+ + + + G+ K GY+ D L+YG G+G
Sbjct: 87 IVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVGYTFDKTLVYGTAGYGVT------ 140
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
DN+ +A G V++G G++ ++ +S+ A Y + + + +
Sbjct: 141 -RFKAKDNTTSA----SGCEGGVLIGAGVEQALSGPLSVKAEYDF----QRFNDVKSQVN 191
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+E+ + N H G+N F
Sbjct: 192 GIEQRNNLKN-HSIKAGLNYKF 212
>gi|192291529|ref|YP_001992134.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris TIE-1]
gi|192285278|gb|ACF01659.1| OmpA domain protein transmembrane region-containing protein
[Rhodopseudomonas palustris TIE-1]
Length = 246
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 20/188 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLED 101
WSG YVG + + T L G G + G+N Q+ +
Sbjct: 38 AAYDWSGFYVGANGGWGTSRNCWDYLGTTATPAVALGEGCHDASGGTAGGQAGYNWQISN 97
Query: 102 FVFGINCHTTAAKDDSTFYRL--------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+VFG+ A + L K +G + GY+ ++ L+Y GG
Sbjct: 98 WVFGVEAQGNWADFKGSNVSLLVVPGTTNDSKIDAFGLFTARVGYAWNNALLYVKGGAAV 157
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ + A G +G GL+Y + + Y ++ +
Sbjct: 158 TSDKYTVYGNRTGAITDTASETRWGAA----VGGGLEYGFSPAWTFGVEYDHLFMGSRDI 213
Query: 214 NNSNAKSD 221
+ D
Sbjct: 214 TFATTSID 221
>gi|85715495|ref|ZP_01046476.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A]
gi|85697690|gb|EAQ35566.1| putative outer-membrane protein precursor [Nitrobacter sp. Nb-311A]
Length = 257
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 60/173 (34%), Gaps = 16/173 (9%)
Query: 52 GIWSGNYVGLHISRLYE------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
WSG Y+G + T P + + + G ++G+ Q ++VFG
Sbjct: 43 YDWSGFYIGANGGWGSSRNCWNFTTPAGAFVANEGCHDATGGTAGGQIGYRWQSTNWVFG 102
Query: 106 INC-----HTTAAKDDSTFYRLKEKY--FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ + + F +G + GY+ D+ L+Y GG A V
Sbjct: 103 LEAQGNWADLSGRRASLAFPAFTNDSHLGAFGLFTGQIGYAWDATLLYVKGG---AAVTS 159
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + + + +G+GL+Y + SL+ Y +I
Sbjct: 160 NRYRSLATLTGAQVTNDVNNSRWGATVGVGLEYGFAPNWSLAFEYDHIFMGNS 212
>gi|85714944|ref|ZP_01045929.1| outer membrane autotransporter barrel protein [Nitrobacter sp.
Nb-311A]
gi|85698141|gb|EAQ36013.1| outer membrane autotransporter barrel protein [Nitrobacter sp.
Nb-311A]
Length = 654
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 75/211 (35%), Gaps = 22/211 (10%)
Query: 54 WSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y+G L + + + +T G ++G++ Q+ +V G+
Sbjct: 434 WTGLYIGASAGVLNGRNDWSFPGLGTRTNPRYAGFAGGGQIGYDWQIGTWVVGLEGSLMG 493
Query: 113 AKD-------DSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVI-----DS 159
+ ++ FY + + G K GY+ + L+Y GG ++
Sbjct: 494 SNARGARSCPNALFYTCENEMNWLGTATAKLGYTIWNRSLVYLRGGAAFGNTRIVTNCNT 553
Query: 160 SLEKVESDNSKNAKGRFDGHG-------SSVVLGIGLDYMVNYDISLSASYRYIP-HHIH 211
++ D S A G G + +G+G ++ + ++ A Y
Sbjct: 554 GPDRGYIDYSIPAVIAQPGCGANSSKTAAGWTVGLGTEFALTRSWTVRAESNYFDLGTER 613
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++D N I+++G+N F
Sbjct: 614 YSLAQGGGIPPLQIDTHNNGFISTIGLNYRF 644
>gi|146343090|ref|YP_001208138.1| hypothetical protein BRADO6285 [Bradyrhizobium sp. ORS278]
gi|146195896|emb|CAL79923.1| Putative outer membrane protein [Bradyrhizobium sp. ORS278]
Length = 267
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/228 (20%), Positives = 77/228 (33%), Gaps = 37/228 (16%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTI------NRKTYNSLLPNGL-----------GIE 92
E WSG ++GLH+ + ++ + D + G G +
Sbjct: 35 ERFAWSGCHLGLHLGGAWASNSITDPVLLVQDNGNLGGPGFTTVGTTVKTGQSGGIAGGQ 94
Query: 93 LGHNIQL-EDFVFGINCHTTAAKDDSTF-----------YRLKEKYFIYGDVVLKAGYSV 140
+G + Q V G + A + + + K K D+ +AGY+V
Sbjct: 95 IGCDYQFPSSVVVGAEFSASGAALNGSRTFALPDSPPDIAQAKIKTDFITDLTARAGYAV 154
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG----SSVVLGIGLDYMVNYD 196
D L Y GG A S + ++ N FD G + G G+++ D
Sbjct: 155 DHWLFYAKGGVAWASTKYS-VTGGFTNAGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQD 213
Query: 197 ISLSASYRYIPHHIHSVNNS---NAKSDVERVDRKGNAHIASLGINMH 241
S Y Y +VN N + + K + +G+N H
Sbjct: 214 WSARFEYDYYDFGTRAVNMVDVLNGNAAAGPLSFKTSVQTVKVGVNFH 261
>gi|154246409|ref|YP_001417367.1| porin [Xanthobacter autotrophicus Py2]
gi|154160494|gb|ABS67710.1| porin [Xanthobacter autotrophicus Py2]
Length = 248
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 28/215 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTY------NSLLPNGL--GIELGHNIQL-EDF 102
W+G Y+G ++ + + + Y SL +G G ++G+N Q +
Sbjct: 38 FSWTGFYIGANVGYGGDKFTFDEVESYYGYPYYANSTSLNSSGFFAGGQIGYNYQFANNV 97
Query: 103 VFGINCHTTAAKDDST--------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
V G+ + + +G + + GY+ D L Y
Sbjct: 98 VLGVETDLQWSGIEGKEDYSSVYVYGGYPYTSSYGASVDYFGTIRARIGYAFDRFLPYIT 157
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG SS + S +A +G G++Y + + + Y Y+
Sbjct: 158 GGAAYGKTKISSSYAGDGFGSLSASAT----NWGWTVGGGVEYAITNNWTFKTEYLYVDL 213
Query: 209 HIHSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
++ H G+N F
Sbjct: 214 GSTDYAYADGYGYYSYAGTVDTKFHTLKAGVNYKF 248
>gi|148255878|ref|YP_001240463.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146408051|gb|ABQ36557.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 257
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 79/211 (37%), Gaps = 26/211 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLA----------DTINRKTYNSLLPNGLGIELGHNIQLED 101
WSG YVG + +NR+ + +G ++G+ Q+ +
Sbjct: 45 YDWSGFYVGFNAGGGSSRDCWNLVQNANVVVNPALNREGCSGGGGAAVGGQVGYRYQMAN 104
Query: 102 FVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+VFG+ A T L + + +G + GY+ D++L Y GG A
Sbjct: 105 WVFGVEAQGDWANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAFDNILGYIKGG--AA 162
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI---PHHIH 211
V D + N + G +G GL+Y + S+ Y +I +++
Sbjct: 163 VVGDRYDTFTTNTNVMLDRANTTRWGG--TIGAGLEYGFAPNWSVGVEYDHIFLGNKNLN 220
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
VN + A + R+ + + + +N F
Sbjct: 221 FVNAAGAPAMTHRIKQDVDIGLVR--LNYKF 249
>gi|118593370|ref|ZP_01550754.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
gi|118434048|gb|EAV40705.1| outer membrane protein, putative [Stappia aggregata IAM 12614]
Length = 208
Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 15/154 (9%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAK-DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
G+ +G+N L FV GI A D+T L L+AGY+ D L +
Sbjct: 69 GVHVGYNHMLGQFVLGIEGEANLANFSDTTSANLDVDINWMIAARLRAGYAFDRFLAFAT 128
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G S +V + + H + + G G++ V IS+ A Y++
Sbjct: 129 TGV--------SFSEVTFEIPGTGISDSNTH-TGFLFGGGVEGYVTEHISVRAEYQHHWF 179
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
S N D+E + + G++ HF
Sbjct: 180 GNESYNVGAGAFDIEG-----DLDLLRAGVSYHF 208
>gi|75675529|ref|YP_317950.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74420399|gb|ABA04598.1| putative outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 241
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 11/160 (6%)
Query: 90 GIELGHNIQL-EDFVFGINCH---TTAAKDDSTF---YRLKEKYFIYGDVVLKAGYSVDS 142
G++ G + Q ++V GI +++ F + G V + GYS
Sbjct: 71 GVQGGADYQFANNWVLGIEAQHSWLANYRENVAFPGGSVVTGGNSGLGSVTGRLGYSWGP 130
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+Y GG+ D +L ++ + A S +G GL+YM + S A
Sbjct: 131 TLLYAKGGYAF---RDGALGVTDAAGAPQAFTTTGNRNSGYTVGAGLEYMFAPNWSAKAE 187
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+Y + + + +DV + + H G+N F
Sbjct: 188 YQYFNFG-RTTFGAGSPADVVGASFRNDEHTVKAGVNYRF 226
>gi|148255739|ref|YP_001240324.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407912|gb|ABQ36418.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 245
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 28/206 (13%)
Query: 54 WSGNYVGLHISRLYETHPLA-----DTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGI 106
WSG Y G+ + T + + NG +G +G+N Q ++ V G+
Sbjct: 43 WSGIYAGIQGGGGWGTSKETFIGRFNAPGFLGTQNYNTNGGFVGGVIGYNWQFDNLVVGL 102
Query: 107 NCHTTAAKDDSTFYRLKEKYF--------IYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ + + +GD+ + GY+V L + GG
Sbjct: 103 EGDYHWSDINGRSAVINAGVGDTYFTKLTSFGDIKGRLGYAVGPALFFVSGG-------- 154
Query: 159 SSLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+++ +++ + A F + + +G G +YM + S Y Y+ ++
Sbjct: 155 AAVGELQHRYDRAAGVFFGQNTTRWGYTVGAGAEYMFAPNWSAKLEYNYLDFGKSTLQYV 214
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
R + K + H G+N HF
Sbjct: 215 GVPG---RSEWKDSVHTVKAGLNYHF 237
>gi|312115901|ref|YP_004013497.1| porin [Rhodomicrobium vannielii ATCC 17100]
gi|311221030|gb|ADP72398.1| porin [Rhodomicrobium vannielii ATCC 17100]
Length = 266
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/254 (18%), Positives = 80/254 (31%), Gaps = 41/254 (16%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
+ + + + A DLY D Y+ IW+G YVG H +++ T
Sbjct: 12 VALSSSAFAADLYKGSLKD-------APVYEAPA--IWTGLYVGAHGGYAWDSIDFPGTP 62
Query: 77 ----NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD-----DSTFYRLKEKYF 127
L +G ++G+N Q + V G+ +AA D +
Sbjct: 63 SHANGGAPRPDLEGGFVGGQIGYNYQFDKIVVGVVADISAANLEKTERDGNYLNETTSID 122
Query: 128 IYGDVVLKAGYSVDSLLIYGM--------------------GGFGGAYVIDSSLEKVESD 167
+G V GYS +L Y GG+GG S
Sbjct: 123 KFGTVRAILGYSFGKVLPYATVGYGWTSLSYKFGCPDALITGGYGGCNTKPSWSPVTTP- 181
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN-NSNAKSDVERVD 226
S N FD +V G G+ Y ++ S+ Y + + + A +
Sbjct: 182 -SANRTSGFDATTGGLVYGGGVKYAIDNRFSIGVEYLRFDKADETADYAAYAYFPASKTK 240
Query: 227 RKGNAHIASLGINM 240
+ L ++
Sbjct: 241 IETETDTVKLSVDY 254
>gi|154246410|ref|YP_001417368.1| porin [Xanthobacter autotrophicus Py2]
gi|154160495|gb|ABS67711.1| porin [Xanthobacter autotrophicus Py2]
Length = 258
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 64/227 (28%), Gaps = 38/227 (16%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADT------INRKTYNSLLPNGL--GIELGHNIQL-E 100
W+G Y+G ++ + + T SL +G G ++G+N Q
Sbjct: 36 PVFSWTGFYIGANVGYGGDKFTFDEVESYNGYPYYATSTSLNSSGFFAGGQIGYNYQFAN 95
Query: 101 DFVFGINCHTTAAKDDST--------------FYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ V G + + +G + + GY+ D L Y
Sbjct: 96 NVVLGAETDLQWSGIEGKADYSSVYLYGGYPYTSSFGASVDYFGTIRARIGYAFDRFLPY 155
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
GG S S +A G +G G++Y + + + Y Y+
Sbjct: 156 ITGGAAYGKTKVSGSYYDYSVGGFSA----SGTNWGWTVGGGVEYAITNNWTFKTEYLYV 211
Query: 207 PHHIHSVNNSNAKSDVERVDR-----------KGNAHIASLGINMHF 242
++ + H G+N F
Sbjct: 212 DLGSTDYTYASGSGPEAMIALDRGYSNTTGSVDTKFHTLKAGVNYKF 258
>gi|296444784|ref|ZP_06886747.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium
OB3b]
gi|296257732|gb|EFH04796.1| hypothetical protein MettrDRAFT_0463 [Methylosinus trichosporium
OB3b]
Length = 1115
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 79/252 (31%), Gaps = 64/252 (25%)
Query: 53 IWSGNYVGLHISRLYETH----------------------PLADTINRKTYNSLLPNGLG 90
+W+G + GL+ + + P +D R S+ + G
Sbjct: 60 MWTGFHAGLNGGYGWSSDTKAQLTVTPLEPPLLYVPPDRVPPSDNFARDATRSIARSASG 119
Query: 91 -----IELGHNIQLED-FVFGINCHTTA---------AKDDSTFYRLKEKYFIYGDVVLK 135
++LG++ + +V G+ ST + + G + +
Sbjct: 120 AFIGGLQLGYDWAFGERYVVGVEADFQGSVGGHGEATTYSPSTVFVTANQLDYLGTLRGR 179
Query: 136 AG-YSVDSLLIYGMGGFGGAYVIDSSLEKVESDN----SKNAKGRFDGHGSSVVLGIGLD 190
G + SLL+YG G AY ++ ++ + + D G G++
Sbjct: 180 LGVLATPSLLVYGTAG--AAYGGPATRTQITQPGAGVFGGYGESQTDRTRLGWAAGAGVE 237
Query: 191 YMVNYDISLSASYRYIPHHI---HSVNNSNAKSDVE-----------------RVDRKGN 230
+M + SL A Y + H++ + R N
Sbjct: 238 WMFDPKWSLKAEYLHYDLGSIGGHTLYGMAGGMALSVGDPLADPVIPYAYLAGRPRTPIN 297
Query: 231 AHIASLGINMHF 242
HI G+N HF
Sbjct: 298 GHILRAGVNYHF 309
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 81/258 (31%), Gaps = 49/258 (18%)
Query: 31 PRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA---------DTINRKTY 81
P + + + + + W YVG+++ + +
Sbjct: 855 PALELMGLAREPDKQPKAPPPS-WQDIYVGVNLGGAFANARTSVATAPTSSAAPSAPVAA 913
Query: 82 NSLLPNGL--------GIELGHNIQLE-DFVFGINCHTTAAKDDS--------------- 117
S +P+G G ++G N +L FV G+ + +S
Sbjct: 914 ASAIPSGDVGLAGFVGGFQIGGNQKLNARFVAGLEADLRGSFGNSGSRSQFGTSTSIGNT 973
Query: 118 --TFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSL---EKVESDNSKN 171
+F + + G + + GY V + +Y GG A + S+ ++V +
Sbjct: 974 FLSFGQTTVRLNYLGTIRPRLGYLVTPDVQLYATGGLAFAGLTSSAEMVTDRVGGITTTV 1033
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK-------SDVER 224
+ G G+++ + + + A Y + V A + +
Sbjct: 1034 GDPLYQDTRLGWTAGGGVEWALAPNWTAKAEYLHYDLGQIRVRTDVAHPAGFYSFAALGE 1093
Query: 225 VDRKGNAHIASLGINMHF 242
+ H+ G+N HF
Sbjct: 1094 TQL--DGHLLQFGVNRHF 1109
>gi|75675759|ref|YP_318180.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi
Nb-255]
gi|74420629|gb|ABA04828.1| putative outer-membrane protein precursor [Nitrobacter winogradskyi
Nb-255]
Length = 258
Score = 79.5 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 75/208 (36%), Gaps = 22/208 (10%)
Query: 52 GIWSGNYVGLHISRLYE------THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
WSG Y+G + T P + + ++ G ++G+ Q +++FG
Sbjct: 44 YDWSGFYIGANGGWGSSRNCWDFTTPAGVFVANEGCHNATGGTAGGQIGYRWQATNWLFG 103
Query: 106 INC-----HTTAAKDDSTFYRLKEKYFI--YGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ + F + +G + GY+ D+ L+Y GG A V
Sbjct: 104 LEAQGNWADLSGRNVSLAFPAFTNNSNLNAFGLFTGQIGYAWDATLLYVKGG---AAVTS 160
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI-----PHHIHSV 213
+ + + A + + V+G+GL+Y + SL+ Y +I H +
Sbjct: 161 NRYRSLVTATGVQATDSVNNNRWGAVVGVGLEYGFAPNWSLAFEYDHIFMGNSRHTFTNN 220
Query: 214 NNSNAKSDVERVDR-KGNAHIASLGINM 240
+ A + D + I + IN
Sbjct: 221 GVAGAAGTLFGTDNISQDVDIVTARINY 248
>gi|170741349|ref|YP_001770004.1| porin [Methylobacterium sp. 4-46]
gi|168195623|gb|ACA17570.1| porin [Methylobacterium sp. 4-46]
Length = 255
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 28/217 (12%)
Query: 52 GIWSGNYVGLHISRLYETH----PLADTINRKTYNSLLPNGLGIELGHNIQLED---FVF 104
W+G Y G +++ L + + LA + S G +G+N Q FV
Sbjct: 38 FTWTGAYFGANVAGLVDGNFLLRSLAPLPGAASRPSAGGFVAGGTVGYNYQFAPENGFVA 97
Query: 105 GINCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGYSVDSLLIYGMGGFGGA 154
G+ + T + + + GY+ +L+Y GG+
Sbjct: 98 GLEGDIGYSGVRHTGIIAAAGLGTANGRLQTDTYHATIRGRIGYAWGPVLVYATGGWAFT 157
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHG---------SSVVLGIGLDYMVNYDISLSASYRY 205
+ + + +G G+ Y + D SL A Y +
Sbjct: 158 EFNAEGVAATQRFGLGAGRPFVGAFAGPVRRSIPLDGYTVGGGVAYKITPDWSLKAEYLF 217
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ RV +AH+ +G + F
Sbjct: 218 AELDRRVAFRAGGTPVRARVGL--DAHLMRIGADYRF 252
>gi|307320995|ref|ZP_07600402.1| porin [Sinorhizobium meliloti AK83]
gi|306893369|gb|EFN24148.1| porin [Sinorhizobium meliloti AK83]
Length = 213
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 51/151 (33%), Gaps = 13/151 (8%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST--FYRLKEKYFIYGD 131
G G+N Q D+V G+ + +D T + + G
Sbjct: 61 SVPGGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVFGSDTEAGTDVSGS 120
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V + GY+V D LIY GG+ + V+ + K F+ +G G+D
Sbjct: 121 VRARLGYTVNDRTLIYATGGWA------VTRGFVDVAGAPKEKETFN----GWTIGGGVD 170
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
Y + A YRY V N D
Sbjct: 171 YGFTDSVFGRAEYRYNDFGDKDVGGVNVDLD 201
>gi|323139008|ref|ZP_08074068.1| porin [Methylocystis sp. ATCC 49242]
gi|322395762|gb|EFX98303.1| porin [Methylocystis sp. ATCC 49242]
Length = 300
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 93/292 (31%), Gaps = 70/292 (23%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
VV ++++ ++A DL P + D A +W+G YVGL+ +
Sbjct: 8 VVVMTAVLMTASAVAADL--PSRKDDPLPAPPP--------PMWTGFYVGLNAGGTWSNS 57
Query: 71 PLADTINRKTYN--SLLPNGLGIEL--------------------GHNIQL-EDFVFGIN 107
A+ + + L + LG G+N ++ FV GI
Sbjct: 58 NSANVASAPFWTLPGLNGDVLGASAISASAYNPANAGGFIGGGQIGYNWRIAGSFVTGIE 117
Query: 108 CHTTAA---------------------KDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLI 145
+T + G V + GY + +LLI
Sbjct: 118 ADIQGIAGNGGAGSSANVAAIAGALVPSHVATVVGTSKSLDYLGTVRSRIGYLATPTLLI 177
Query: 146 YGMGGFGGAYVIDS-----SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
YG GG V S S +++ + G F G G+++M + S
Sbjct: 178 YGTGGLAYGGVSSSATISQSASFIDTAVPWGSTGAFSDTRVGWTAGGGIEWMFMSNWSAK 237
Query: 201 ASYRYIPHHIHSVNNS----------NAKSDVERVDRKGNAHIASLGINMHF 242
Y Y + N+S + + + N +I G+N HF
Sbjct: 238 VEYLYYDLGSVTYNSSPLVVTSTLFGAETASLPSTRVRFNGNIVRAGLNYHF 289
>gi|114706584|ref|ZP_01439485.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506]
gi|114537976|gb|EAU41099.1| outer membrane protein, 31 kDa [Fulvimarina pelagi HTCC2506]
Length = 243
Score = 79.1 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 76/224 (33%), Gaps = 21/224 (9%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELG 94
D + + ++ D W+G YVG+ + + + G++ G
Sbjct: 25 DDPSASYSDTGAYDQTPSDWTGGYVGVTGGLAAGESEYSVSDGTGFETTAGGGLGGVQAG 84
Query: 95 HNIQLEDFVFGINCHTTAAKDDS------------TFYRLKEKYFIYGDVVLKAGYSV-D 141
+++QL V G + D+ T + G V +AGY+ D
Sbjct: 85 YDVQLGRAVLGGVADISLTGIDADVSTRERAGGVETTNSANTELDYLGTVRARAGYAASD 144
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG--RFDGHGSSVVLGIGLDYMVNYDISL 199
+L YG GG + E N + R +G GL+Y ++SL
Sbjct: 145 RVLAYGHGGLAYGRTDTTISESERRGGVTNTQTESRKSDTKYGYAVGAGLEYKATDNVSL 204
Query: 200 SASYRYIP-HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y Y ++SN RVD+ H G+N F
Sbjct: 205 QTEYGYHDLGKDRLYSDSNG-----RVDQDLQFHAVKAGVNFRF 243
>gi|15965438|ref|NP_385791.1| outer-membrane protein [Sinorhizobium meliloti 1021]
gi|307310613|ref|ZP_07590260.1| porin [Sinorhizobium meliloti BL225C]
gi|15074619|emb|CAC46264.1| Probable outer-membrane protein [Sinorhizobium meliloti 1021]
gi|306899723|gb|EFN30349.1| porin [Sinorhizobium meliloti BL225C]
Length = 215
Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 52/153 (33%), Gaps = 15/153 (9%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL----KEKYFIY 129
G G+N Q D+V G+ + +D T + +
Sbjct: 61 SVPGGSASEKFSGGLFGAFAGYNYQHGDWVVGVEGDVSYNWNDETVTVFGSDTEAGTDVS 120
Query: 130 GDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G V + GY+V D LIY GG+ + V+ + K F+G +G G
Sbjct: 121 GSVRARLGYTVNDRTLIYATGGWA------VTRGFVDVAGAPKEKETFNG----WTIGGG 170
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+DY + A YRY V N D
Sbjct: 171 VDYGFTDSVFGRAEYRYNDFGDKDVGGVNVDLD 203
>gi|75674443|ref|YP_316864.1| outer membrane protein [Nitrobacter winogradskyi Nb-255]
gi|74419313|gb|ABA03512.1| possible outer membrane protein [Nitrobacter winogradskyi Nb-255]
Length = 241
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 80/233 (34%), Gaps = 32/233 (13%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
V FL + + A DL PR Y W+G Y+G P
Sbjct: 26 VAFLGMAAIVPAQAADL-APRPYTK------APPYVPAPIYNWTGFYLGG-HIGGAFGGP 77
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
N+ G ++G++ Q +VFGI + + S F G
Sbjct: 78 GNVLAPGFFNNNDGAFMGGGQVGYDTQFSPNWVFGIEANYSFLDTGSFFA-----NRGLG 132
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V + GY+ L+Y GG+G A ++ + ++ +G GL+
Sbjct: 133 SVTARLGYTWGPALLYVKGGYGWADSRFTN--GFAGNGGRD----------GYTVGGGLE 180
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR-KGNAHIASLGINMHF 242
Y+ + S Y+Y + N N + + + + H +G+N F
Sbjct: 181 YLFTQNWSGKVEYQYYD-----LGNVNFFGPLGGIGNFRNDQHTVKVGLNYRF 228
>gi|148560659|ref|YP_001258682.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
gi|3914204|sp|Q45335|OM25_BRUO2 RecName: Full=25 kDa outer-membrane immunogenic protein; Flags:
Precursor
gi|1457929|gb|AAB06702.1| 25 kDa outer membrane protein [Brucella ovis]
gi|148371916|gb|ABQ61895.1| outer-membrane protein Omp25 [Brucella ovis ATCC 25840]
Length = 201
Score = 78.7 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 59/195 (30%), Gaps = 15/195 (7%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 8 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 66
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + + L+ K G + +
Sbjct: 67 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQGFEGSLRARV 123
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY ++ ++ Y G G+ + + N G GL+ + +
Sbjct: 124 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDN 172
Query: 197 ISLSASYRYIPHHIH 211
I YRY +
Sbjct: 173 ILGRVEYRYTQYGNK 187
>gi|323138620|ref|ZP_08073687.1| porin [Methylocystis sp. ATCC 49242]
gi|322396108|gb|EFX98642.1| porin [Methylocystis sp. ATCC 49242]
Length = 305
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 77/255 (30%), Gaps = 66/255 (25%)
Query: 53 IWSGNYVGLHISRLYET------------------------HPLADTINRKTYNSLLPNG 88
+W+G YVGL+ ++ H ++ + +G
Sbjct: 41 MWTGFYVGLNAGGMWSNSSVTNLTTIPGFINFGGVSPLGLNHAISAAVGANAAIPTNTSG 100
Query: 89 L--GIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKE--------------------K 125
G ++G+N Q F+ GI ++ + +
Sbjct: 101 FIGGGQIGYNWQFGGSFLAGIEADIQGVAGSNSNSTVTTIATGAGFPANPTMTTMTASRR 160
Query: 126 YFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNA--------KGRF 176
G V + G+ +LL+YG GG + S++ V ++ G F
Sbjct: 161 LDYIGTVRGRLGWLFTPTLLVYGTGGLAYG-GVTSNVSLVGAETPAAGPNNGVWFSNGAF 219
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH---------IHSVNNSNAKSDVERVDR 227
G G+++M + S Y Y + + + +
Sbjct: 220 SDTRVGWTAGGGVEWMFMPNWSAKVEYLYYDLGRVTYAMAPIVQTFPAAPYWTHFPGAST 279
Query: 228 KGNAHIASLGINMHF 242
+ N +I G+N HF
Sbjct: 280 RFNGNIVRAGLNYHF 294
>gi|154244432|ref|YP_001415390.1| porin [Xanthobacter autotrophicus Py2]
gi|154158517|gb|ABS65733.1| porin [Xanthobacter autotrophicus Py2]
Length = 283
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 68/251 (27%), Gaps = 56/251 (22%)
Query: 48 DDEYGIWSGNYVGLHISRLY---------------ETHPLADTINRKTYNSLLPNGLGIE 92
W+G Y+G + + N + + G +
Sbjct: 33 APASFSWTGFYIGGNAGYAWNSGTLDGVGYIYGSDYGSYSNGWFNGQRSSESNSFTGGAQ 92
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYR-------------------------LKEKYF 127
G+N Q+ V G A T+
Sbjct: 93 AGYNYQIGRAVLGFEADINYADASKTYAASSTYDLYPYPVDRPDYNYHLREQLDASASVE 152
Query: 128 IYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSL-------------EKVESDNSKNAK 173
+G + + G ++D LL+Y GG V S D S
Sbjct: 153 WFGTIRARLGVTALDRLLVYATGGAAYGKVSGSGSYSWREYGFWWGGPGDHAFDRSGGFG 212
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS--VNNSNAKSDVERVDRKGNA 231
G +G GL+Y + +I++ Y Y+ + + + +
Sbjct: 213 GTDSSVRWGWTVGGGLEYAITDNITVKGEYLYVDLGSNDYRIPEAIGGDEFVTWTSSTKL 272
Query: 232 HIASLGINMHF 242
++A LG+N F
Sbjct: 273 NVARLGVNYKF 283
>gi|209885401|ref|YP_002289258.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
gi|209873597|gb|ACI93393.1| outer membrane protein Omp31 [Oligotropha carboxidovorans OM5]
Length = 225
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 39/192 (20%)
Query: 90 GIELGHNIQLED-FVFGINCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGY 138
G ++G+N Q+ +V G+ A + + +G + + G+
Sbjct: 34 GFQIGYNYQVRPDWVIGLEGDFQLADIGGSGSTSHIVPGVATSASQTVRSFGTIRARLGH 93
Query: 139 -SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA----------------------KGR 175
+ ++LL+Y GGF A + S+ VE S + G
Sbjct: 94 VAAENLLVYATGGFAFAKINSSARFDVEPGTSGSGIFDINGVRYTSLCGGPNPNVCYAGS 153
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRY--IPHHIHSVNNSNAKSDVE---RVDRKGN 230
G +G G +Y + SL Y Y + V + + V +
Sbjct: 154 SRGMAPGWTIGGGFEYALGPRWSLKGEYLYARFDRGLTEVAVTTMPGTLPITYPVKFATD 213
Query: 231 AHIASLGINMHF 242
+I G+N F
Sbjct: 214 LNIVRAGLNYRF 225
>gi|92117214|ref|YP_576943.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
gi|91800108|gb|ABE62483.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14]
Length = 238
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 18/196 (9%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTA 112
W+G Y+G H+ + + + G++ G + Q ++V G +
Sbjct: 44 WTGFYIGGHLGGAFGGDSSLSGSDGRFLG-------GVQGGADYQFANNWVLGAEAQYSW 96
Query: 113 AKDDSTFYRLKEKYFI------YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+++ + G V + GY+ L+Y GG+ DS L ++
Sbjct: 97 LTNNNGGAVFPGGNIVTGNDRGLGSVTGRLGYAWGPTLLYAKGGYAF---RDSRLGVTDA 153
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
A + +G GL+YM + S Y+Y + + + +D+
Sbjct: 154 AGVPLAFATTGNRDNGYTVGAGLEYMFAPNWSAKVEYQYYNFGKTTF-AAGSPTDIVGTS 212
Query: 227 RKGNAHIASLGINMHF 242
+ + H G+N F
Sbjct: 213 FRNDDHTVKAGLNYRF 228
>gi|227821981|ref|YP_002825952.1| outer membrane protein [Sinorhizobium fredii NGR234]
gi|227340981|gb|ACP25199.1| outer membrane protein [Sinorhizobium fredii NGR234]
Length = 216
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 16/177 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
+W+G YVGL + L+ G G+N Q+ D+V G+
Sbjct: 39 PTFVWTGGYVGLQGGGGWLNSDLS-VPGASASEDFSGGLFGAFAGYNYQMGDWVVGVEGD 97
Query: 110 TTAAKDDSTFYRLKEKY----FIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKV 164
+ +D +F + G V + GY++ + L+YG GG+ + V
Sbjct: 98 VSYNWNDKSFTVFGASTEVGTDVSGSVRGRVGYTLNEKALLYGTGGWA------VTRGFV 151
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + K F+G +G G+DY + A YRY V + D
Sbjct: 152 DVAGAPKEKETFNG----WTIGGGIDYAFTNSMFGRAEYRYNDFGDKDVGGVDVDLD 204
>gi|260545348|ref|ZP_05821089.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC
8038]
gi|260754712|ref|ZP_05867060.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 6 str. 870]
gi|260757935|ref|ZP_05870283.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 4 str. 292]
gi|260761758|ref|ZP_05874101.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 2 str. 86/8/59]
gi|260883735|ref|ZP_05895349.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 9 str. C68]
gi|260096755|gb|EEW80630.1| LOW QUALITY PROTEIN: outer membrane protein [Brucella abortus NCTC
8038]
gi|260668253|gb|EEX55193.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 4 str. 292]
gi|260672190|gb|EEX59011.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 2 str. 86/8/59]
gi|260674820|gb|EEX61641.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 6 str. 870]
gi|260873263|gb|EEX80332.1| LOW QUALITY PROTEIN: outer membrane protein 25b [Brucella abortus
bv. 9 str. C68]
Length = 173
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 19/166 (11%)
Query: 90 GIELGHNIQLED-FVFGINCHTTAAKDDSTFYR----------LKEKYFIYGDVVLKAGY 138
G+ G+N + + FV G++ T D++ + K G V + G
Sbjct: 14 GLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGV 73
Query: 139 SVDSLLIYGMGGFGGAYVIDSS--LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
++D + Y GG V +S + +ES +K + G G+DY +
Sbjct: 74 AMDRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKT-----MTGWAAGAGVDYAATDN 128
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + YRY + + + VE K H LG+ F
Sbjct: 129 VIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNKFKTHDIRLGVAYKF 173
>gi|302381465|ref|YP_003817288.1| porin [Brevundimonas subvibrioides ATCC 15264]
gi|302192093|gb|ADK99664.1| porin [Brevundimonas subvibrioides ATCC 15264]
Length = 277
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 57/201 (28%), Gaps = 28/201 (13%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF 127
D + G +G++ Q +FV G + + +
Sbjct: 79 GGSAKGDLPSNGCDEDSNGVEGGGRIGYDFQFGNFVVGAVGEYSGVDAEDSVTSYSTTPA 138
Query: 128 IY---------GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
Y + + GY+ L+Y GG + + + D
Sbjct: 139 YYVSERNLNNLAALRARVGYAYGPALVYATGGVATGEMTNRFYSSNGQNTFTA--TTDDD 196
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK-----------------SD 221
G G++Y + +S++ Y Y N + +D
Sbjct: 197 QADGYQAGGGIEYALAPHLSVTGEYIYTSLEASDFNVRVGRGIAIATNPFVLAPNTTGTD 256
Query: 222 VERVDRKGNAHIASLGINMHF 242
++R + + H +G+N F
Sbjct: 257 IQRSNGRFGLHAVRIGMNYRF 277
>gi|254504423|ref|ZP_05116574.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
gi|222440494|gb|EEE47173.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
Length = 221
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 59/194 (30%), Gaps = 20/194 (10%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G YVG + + + ++++ G + + V G+ +
Sbjct: 44 DWTGFYVGTQLGWAFGNFDNSTGGASSSFSNNGVGGGAYAGYNFQVTPNVVVGLESDFSL 103
Query: 113 AKDDSTF----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ + LK + + GY+ D +IYG GG A + ++ +S
Sbjct: 104 TDLEKSGTVNGLSLKSSSDWNANFRGRLGYAFDRYMIYGAGGLAIADLEATANGVSDSKT 163
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
LG G + + ++ Y Y N V +
Sbjct: 164 -----------ALGWTLGAGAEAAITQNVVARFDYSYQDFGDQDFNLGG-----TGVSTE 207
Query: 229 GNAHIASLGINMHF 242
N H GI F
Sbjct: 208 FNDHQVRAGIAYKF 221
>gi|323138506|ref|ZP_08073575.1| porin [Methylocystis sp. ATCC 49242]
gi|322396302|gb|EFX98834.1| porin [Methylocystis sp. ATCC 49242]
Length = 300
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 74/250 (29%), Gaps = 61/250 (24%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYN-------------------SLLPNGL--GIE 92
W+G YVGL+ + A+ + +N + +G G +
Sbjct: 41 WTGFYVGLNAGGTWGQSNSANLSSFALFNDPLWFQGNAFASSAWGAVPTSNASGFIGGGQ 100
Query: 93 LGHNIQLE-DFVFGINCHTTAAKDDS-------------------TFYRLKEKYFIYGDV 132
+G+N Q F+ G+ S T + ++ G V
Sbjct: 101 IGYNWQFGGSFLTGVEADIQGIAASSGRSSVTGVAFNALTGAMAMTTTDVSKRLDYLGTV 160
Query: 133 VLKAGYSVDSLLI-YGMGGFGGAYVIDS----SLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+ GY V L+ YG GG V + S + + F G
Sbjct: 161 RGRLGYLVTPTLLAYGTGGLAYGGVGLNASQFSFDTGAFFGAGIGNTTFSNTLVGWTAGG 220
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVN---------------NSNAKSDVERVDRKGNAH 232
G+++M S Y Y + N S + V + N H
Sbjct: 221 GVEWMFMPGWSAKGEYLYYDLGSTTNNLAPVAGLANVFNLPPGSIGYAYASNVSSRYNGH 280
Query: 233 IASLGINMHF 242
I G+N HF
Sbjct: 281 IVRAGVNYHF 290
>gi|218513075|ref|ZP_03509915.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 134
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 16/150 (10%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+N Q V+G+ + DD + +K KY G V + GY ++ L+YG G
Sbjct: 1 TGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLA 60
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ S SD SK A +G G++ V +I+ YRY +
Sbjct: 61 LGNIKVS---DGTSDESKTAY--------GYTVGAGVEAFVTNNITTRLEYRYTDYQSKD 109
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + R + + LGI + F
Sbjct: 110 YDLDSGS-----FSRGYDENSVKLGIGVKF 134
>gi|220926460|ref|YP_002501762.1| porin [Methylobacterium nodulans ORS 2060]
gi|219951067|gb|ACL61459.1| porin [Methylobacterium nodulans ORS 2060]
Length = 246
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 68/210 (32%), Gaps = 25/210 (11%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI----ELGHNIQLED---FVF 104
W+G Y G++ + + + T S G ++G+N Q FV
Sbjct: 40 FTWTGFYAGVNAGYGFGSGSDSFTDPTYGTISTGGGRDGFVGGGQVGYNYQFTPGSGFVV 99
Query: 105 GINCHTTAAK---------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
G + FY + +G V + GY+VD +L+YG GGF
Sbjct: 100 GAEADIQGTTFGRSRTGLVGSAPFYDVGPSLDWFGTVRGRIGYAVDRILVYGTGGFAYGG 159
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHS 212
S + + G G++Y + +S Y+ H +
Sbjct: 160 GSLPSFAASYTGPLPGTTR------TGWAAGGGVEYAITDRLSARLEGLYVNLDRGHRDT 213
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ A + + G+N F
Sbjct: 214 IYDATAGAYYGVAPDSSAFGLVRAGLNYRF 243
>gi|323136029|ref|ZP_08071112.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC
49242]
gi|322399120|gb|EFY01639.1| hypothetical protein Met49242DRAFT_0499 [Methylocystis sp. ATCC
49242]
Length = 582
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 70/250 (28%), Gaps = 56/250 (22%)
Query: 49 DEYGIWSGNYVGLHISRLYE--------------------THPLADTINRKTYNSLLPNG 88
W+G YVG + + A L
Sbjct: 41 PPVFTWTGLYVGFNFGHTWTASDPVSIGSVNPFDLSGAGFGPASALGATGAVDARLGGYF 100
Query: 89 LGIELGHNIQL-EDFVFGINCHTTAAKD----------------DSTFYRLKEKYFIYGD 131
G + G+N Q E + G A + +L +G
Sbjct: 101 FGGQAGYNWQFSEKLIAGFEADIQGAGVRGGGHLASILPAPAGFAVSGVKLSRGLEYFGT 160
Query: 132 VVLKAGYSVDSLLI-YGMGGFGGAYVIDSS--LEKVESDNSKNAKGRFDG--HGSSVVLG 186
V + GY+V + Y GG V S + + G+ D + +G
Sbjct: 161 VRGRFGYAVTPTFMAYVTGGLAYGGVTADSAIRQSLTPSLLLAEPGKLDYFDNRVGWTVG 220
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNN--------SNAKS------DVERVDRKGNAH 232
G + ++ +IS Y Y +++ S+ ++ D R + N H
Sbjct: 221 AGGEVALSRNISAKLEYLYYDLGGVTLSTPSYFPLTFSDVQTKALTLADASRYTTRYNGH 280
Query: 233 IASLGINMHF 242
G+N F
Sbjct: 281 TLRAGLNYRF 290
>gi|332717300|ref|YP_004444766.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
gi|325063985|gb|ADY67675.1| 25 kDa outer-membrane immunogenic protein [Agrobacterium sp. H13-3]
Length = 219
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 64/197 (32%), Gaps = 21/197 (10%)
Query: 52 GIWSGNYVGLHISRLYET-HPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH 109
W+G G+ + + +T G +G N L + +V G+
Sbjct: 38 FSWTGFTAGVQAGYGWNNNDASIVGLPGQTSADFDGALAGGFVGFNYDLGNSWVVGLEAD 97
Query: 110 TT-AAKDDSTFYR---LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
DDS + G V + GY+ D L+YG G+ A E
Sbjct: 98 FEKNWGDDSATILGTGFDYGFDWQGSVRGRVGYAFDRALVYGTAGWAYA------RGYAE 151
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ K F+ +G+GLDY + YRY + A +
Sbjct: 152 VPGIADVKETFN----GYTVGVGLDYAFTDMVFGRVEYRYTDFGDKDFDFGGAA-----I 202
Query: 226 DRKGNAHIASLGINMHF 242
+ + H +G+ + F
Sbjct: 203 NADVDQHAIRVGLGVKF 219
>gi|148258433|ref|YP_001243018.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
gi|146410606|gb|ABQ39112.1| putative outer membrane protein [Bradyrhizobium sp. BTAi1]
Length = 193
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 61/195 (31%), Gaps = 17/195 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH--- 109
W+G YVG H+ + + G++ G + Q +V G
Sbjct: 10 WTGLYVGGHLGGEFSG-------ASGAFGRESRFLGGLQFGADYQFAPNWVLGAEGQYSW 62
Query: 110 TTAAKDDSTFYR--LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
S+ R L G + + GY+ + L+Y GG+ V S
Sbjct: 63 LAGNGQTSSLGRRELTRDRNGIGGLTGRLGYTWGAGLLYVKGGYAY----QDRSYGVRSR 118
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ S +G GL+YM + S Y+Y + V
Sbjct: 119 AGAPVAFAVRDNKSGYTVGAGLEYMFAPNWSTKLEYQYYDFGTARFVAPSPGRLVRNGTF 178
Query: 228 KGNAHIASLGINMHF 242
H S+G+N F
Sbjct: 179 DSTLHTVSVGVNYRF 193
>gi|110634323|ref|YP_674531.1| OmpA-like transmembrane region [Mesorhizobium sp. BNC1]
gi|110285307|gb|ABG63366.1| OmpA-like transmembrane region [Chelativorans sp. BNC1]
Length = 216
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 69/195 (35%), Gaps = 26/195 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLAD-TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
W+G Y G+ + + AD + + N G G Q FV+G+
Sbjct: 46 PVATWAGPYAGIALGYGFSGEVSADGAPGEVETDGFVGNVFG---GWQGQSGQFVYGVEG 102
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + ++ + G + + GY+ D++L+Y GG + + S ES+
Sbjct: 103 DIGYNGMEGSEGGVDVEHGVDGSLRARLGYAATDNVLLYATGGGAASRLEASGGGLTESE 162
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
G G+D + YRY ++ ++ + VD
Sbjct: 163 T-----------AVGWTAGAGVDVKLTPKSFARLEYRY----------TDLSAEFDSVDV 201
Query: 228 KGNAHIASLGINMHF 242
++ LG+ M F
Sbjct: 202 DTTSNKVMLGVGMQF 216
>gi|92117608|ref|YP_577337.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis
X14]
gi|91800502|gb|ABE62877.1| putative outer-membrane protein precursor [Nitrobacter hamburgensis
X14]
Length = 251
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 11/169 (6%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTY-NSLLPNGLGIELGHNIQLEDFVFGINCHT 110
WSG YVG + T + +G ++G+ Q + VFG+
Sbjct: 42 YDWSGFYVGANGGWGSSRSCWDLTAPVAGGCHDATGGTIGGQIGYRWQSNNLVFGLEAQG 101
Query: 111 TAAK-------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
A D + + + +G + GYS D+ L+Y GG A V +
Sbjct: 102 NWADLNGRNVSIDFSRFTNHSRLDAFGLFTGQIGYSWDATLLYVKGG---AAVTSNRYRS 158
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
V++ + A + V+G+GL+Y + SL Y +I S
Sbjct: 159 VDNVSGLQAADSVNDTRWGGVVGVGLEYGFAPNWSLGFEYDHIFMGNSS 207
>gi|27377196|ref|NP_768725.1| hypothetical protein bll2085 [Bradyrhizobium japonicum USDA 110]
gi|12620785|gb|AAG61061.1|AF322013_180 ID877 [Bradyrhizobium japonicum]
gi|27350339|dbj|BAC47350.1| bll2085 [Bradyrhizobium japonicum USDA 110]
Length = 417
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 80/230 (34%), Gaps = 25/230 (10%)
Query: 38 NEADNNVEYQDDEY-GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL---GIEL 93
N AD E + WSG Y+G H+ Y ++ Y ++ G ++
Sbjct: 22 NAADLEPEVKLPAAVWNWSGGYIGGHVGGGYGRTSFSNPYGPSIYGGIVDTPTFLAGGQI 81
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYF-----------IYGDVVLKAGYSVDS 142
G+N Q +VFG+ + A D T L F I+ + GY+ +
Sbjct: 82 GYNWQKNGWVFGVELDVSGAVSDGTNTCLASSGFVVSANCKAGPNIFATATGRVGYTFGA 141
Query: 143 ---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
L Y GG + E K FD ++G+G++ + S+
Sbjct: 142 SGGTLAYLKGGAAWQNNQGDVINNHEGGLVPQEKTHFDYGRIGGIIGLGVEQALTPAWSV 201
Query: 200 SASYRYIPHHIHSVNNSN-------AKSDVERVDRKGNAHIASLGINMHF 242
+A Y Y+ SV A N HI +G+N HF
Sbjct: 202 AAEYDYLNFGGPSVATPPTVQGPPFAIVPANTTSPSSNYHIGKIGLNYHF 251
>gi|85715155|ref|ZP_01046139.1| putative outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698070|gb|EAQ35943.1| putative outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 236
Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 11/160 (6%)
Query: 90 GIELGHNIQL-EDFVFGINCH---TTAAKDDSTF---YRLKEKYFIYGDVVLKAGYSVDS 142
G++ G + Q +V G+ + D F + G V + GY
Sbjct: 71 GVQGGADYQFANQWVLGVEAQYSWLANYRGDVAFPGGSVVTGGNSGLGSVTGRLGYVWGP 130
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
L+Y GG+ D +L + A S +G GL+YM + S A
Sbjct: 131 TLLYAKGGYAF---RDGALGVTNAAGVPQAFTATGNRDSGYTVGAGLEYMFAPNWSAKAE 187
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+Y + + + +DV + + H G+N F
Sbjct: 188 YQYYNFGKTTF-GAGSPADVVGASFRNDEHTVKAGVNYRF 226
>gi|119383169|ref|YP_914225.1| outer membrane protein [Paracoccus denitrificans PD1222]
gi|119372936|gb|ABL68529.1| outer membrane protein [Paracoccus denitrificans PD1222]
Length = 255
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 72/218 (33%), Gaps = 24/218 (11%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHP--------LADTINRKTYNSLLPNGLGIELGH 95
+ G W+G Y GL + + + L G+ +G+
Sbjct: 43 PVVESAPVGDWAGAYAGLTLGYAFGGDDRVGFTEVDTGTYLGDAGKLELGGANAGLHVGY 102
Query: 96 NIQLEDFVFGINCHTTAAKDDSTFY---------RLKEKYFIYGDVVLKAGYSV-DSLLI 145
Q + +VFG A T + K + LK GY++ LL+
Sbjct: 103 RWQRDRWVFGPELGFEAGNIKDTITFDNQLGGSTDVSSKIRNVLALRLKTGYALRPDLLL 162
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
YG+ G A V S S + F + ++G+G++ ++ +S++ Y Y
Sbjct: 163 YGIAGIARADVEYKVAGTDGSGGSMSESRDFKSN--GYIVGLGVERKLSDRMSVTGEYEY 220
Query: 206 IPHHIHSVNNSNAKSD-VERVDRKGNAHIASLGINMHF 242
+ D + H LG+N F
Sbjct: 221 ANFGKT---TRTFQVDGGVSTQATPDYHNVKLGLNFKF 255
>gi|154246408|ref|YP_001417366.1| porin [Xanthobacter autotrophicus Py2]
gi|154160493|gb|ABS67709.1| porin [Xanthobacter autotrophicus Py2]
Length = 250
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 36/220 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADT--------INRKTYNSLLPNGL--GIELGHNIQL-E 100
W+G Y+G ++ + + SL +G G ++G+N Q
Sbjct: 38 FSWTGFYIGANVGYGGDKFTFDEVESYYYGAYPYYANSTSLNSSGFFAGGQIGYNYQFAN 97
Query: 101 DFVFGINCHTTAAKDDST--------------FYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
+ V G+ + + +G + + GY+ D L Y
Sbjct: 98 NVVLGVETDLQWSGIEGKEDYSSVYIYGGYPYTSSYGASVDYFGTIRARIGYAFDRFLPY 157
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDISLSASYR 204
GG KV + G FD + +G G++Y + + + Y
Sbjct: 158 ITGGAAYGKT------KVSGSYAGEGFGSFDSSSTNWGWTVGGGVEYAITNNWTFKTEYL 211
Query: 205 YIPHH--IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ ++ + + H G+N F
Sbjct: 212 YVDLGSTDYTYGSYDGFYTYAGTVDT-KFHTLKAGVNYKF 250
>gi|94497615|ref|ZP_01304184.1| membrane protein [Sphingomonas sp. SKA58]
gi|94423032|gb|EAT08064.1| membrane protein [Sphingomonas sp. SKA58]
Length = 279
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 49/232 (21%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY------------------ET 69
+ P + QD W+G YVG +
Sbjct: 5 MLAPVGAVMALGLSVPAMAQDSGAVDWTGPYVGGSFGYNWQKSDGGEHLRFDTDADGDYN 64
Query: 70 HPLADTINRKTYNSLLPNGLGI-------------------ELGHNIQLEDFVFGINCHT 110
+ T ++ G +G+++Q FV G+
Sbjct: 65 DVVTTTTGANAFSPGTCGGAARGPTPASGCNDDKDAIAWMGHVGYDMQFGSFVAGVVAEA 124
Query: 111 TAAKDDS---------TFYRLKEKYFIYGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDSS 160
A D FY ++ K G++ + GY+ S ++ Y GG A V ++
Sbjct: 125 GKAYVDDKVTEFSTTPAFYTMRRKIDWNGNLRARLGYTTPSGIMPYITGGLAYAKVKNNF 184
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+++ DG +G G++ V+ + S+ A Y + +++
Sbjct: 185 TTSNGANSFTENNRSEDGW--GWTMGGGVEAKVSDNFSIGARYLWTRYNVDD 234
>gi|218532905|ref|YP_002423721.1| porin [Methylobacterium chloromethanicum CM4]
gi|218525208|gb|ACK85793.1| porin [Methylobacterium chloromethanicum CM4]
Length = 274
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 85/279 (30%), Gaps = 55/279 (19%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
+L I++ +LA DL PR + W+G Y G + Y
Sbjct: 4 SLILSGLAGILLSGTALAADL--PR-------RAEAPVFTPIPVFAWTGAYFGTNGGYAY 54
Query: 68 ETHPLADTINRKTYNSLLPN--------------GLGIELGHNIQLED---FVFGINCHT 110
T + + N G + G+N QL FVFG
Sbjct: 55 TESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGAGFVFGFETDA 114
Query: 111 T---------------AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
A + G V + GY+ D +L+YG GGF
Sbjct: 115 QYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAFDRVLVYGTGGFAYGT 174
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD----------ISLSASYRY 205
+++ + G G + G G++Y + + +++ A Y
Sbjct: 175 TTLAAV--FRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVKAEYLR 232
Query: 206 IPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V ++ ++ + +A +G+N F
Sbjct: 233 YDLGSRTVLIRSTGGPGVGYNIESRTEGALARVGLNFGF 271
>gi|163853964|ref|YP_001642007.1| porin [Methylobacterium extorquens PA1]
gi|240141418|ref|YP_002965898.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|163665569|gb|ABY32936.1| porin [Methylobacterium extorquens PA1]
gi|240011395|gb|ACS42621.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
Length = 274
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 85/279 (30%), Gaps = 55/279 (19%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
+L I++ +LA DL PR + W+G Y G + Y
Sbjct: 4 SLILSGLAGILLSGTALAADL--PR-------RAEAPVFTPIPVFAWTGAYFGPNGGYAY 54
Query: 68 ETHPLADTINRKTYNSLLPN--------------GLGIELGHNIQLED---FVFGINCHT 110
T + + N G + G+N QL FVFG
Sbjct: 55 TESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVFGFETDA 114
Query: 111 T---------------AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
A + G V + GY+ D +L+YG GGF
Sbjct: 115 QYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAFDRVLVYGTGGFAYGT 174
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD----------ISLSASYRY 205
+++ + G G + G G++Y + + +++ A Y
Sbjct: 175 TTLAAV--FRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVKAEYLR 232
Query: 206 IPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V ++ ++ + +A +G+N F
Sbjct: 233 YDLGSRTVLIRSTGGPGVGYNIESRTEGALARVGLNFGF 271
>gi|146341078|ref|YP_001206126.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193884|emb|CAL77901.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
Length = 259
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 73/209 (34%), Gaps = 22/209 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLA----------DTINRKTYNSLLPNGLGIELGHNIQLED 101
W G YVG + NR+ + +G ++G+ Q+ +
Sbjct: 45 YDWGGFYVGFNAGGGSSRDCWNLVSNAGVAVNPAANREGCSGGGGAAVGGQIGYRYQMAN 104
Query: 102 FVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+VFG+ A T L + + +G + GY+ D++L+Y GG A
Sbjct: 105 WVFGVEAQGDWANFKGTNRNLILPNVSDRSRTNGFGLFTGQVGYAFDNILVYFKGG--AA 162
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
V D N + G +G GL+Y + S+ Y +I ++N
Sbjct: 163 VVGDRYDTFTTGTNVMLDRANTTRWGG--TVGAGLEYGFAPNWSVGIEYDHIFLGNKNLN 220
Query: 215 NSNAKSDVERVDR-KGNAHIASLGINMHF 242
A R K + I + +N F
Sbjct: 221 FVAAAGQPAMTHRIKQDVDIGLVKLNYKF 249
>gi|307946127|ref|ZP_07661462.1| putative outer membrane protein [Roseibium sp. TrichSKD4]
gi|307769791|gb|EFO29017.1| putative outer membrane protein [Roseibium sp. TrichSKD4]
Length = 256
Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 71/221 (32%), Gaps = 23/221 (10%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYG-IWSGNYVGLHISRLYETHPLADTINRKTYNSLLP 86
L K D+ V G +W G YVG +T + K+ S +
Sbjct: 53 LVAGAKAADMPVYDDFVTPNLPSAGSVWEGGYVGAEAGLS-QTLTESKVPGAKSTASKMD 111
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDST-----FYRLKEKYFIYGDVVLKAGYSVD 141
G+ G+N Q+ V G+ T + ++K + + G +
Sbjct: 112 AAFGLFGGYNWQVSRVVLGVEAGATYLGGQAKKNLSGVGQVKAGSQWSASLRGRVGLPFE 171
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
S + Y G ++K G ++ G GL+ V+ + + A
Sbjct: 172 SFMPYLTAGLA-----------ATDHSTKANGKTHSALGVGLMFGGGLEVAVSENWRVRA 220
Query: 202 SYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y +N + R++R H LG++ F
Sbjct: 221 DYS----MTGILNEKDMFGG-TRIERTAANHRLMLGVSYAF 256
>gi|91978079|ref|YP_570738.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
gi|91684535|gb|ABE40837.1| putative outer membrane protein [Rhodopseudomonas palustris BisB5]
Length = 235
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 19/206 (9%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADT-----INRKTYNSLLPNGLGIELGHNIQLEDFV 103
W+G Y+G++ S + ++ G+++G + Q+ +V
Sbjct: 34 PALYNWTGVYIGINGSAVLSDKRWDYFGPLLPTGDDGAHNFTGLFGGVQVGFDYQVGSWV 93
Query: 104 FGINCHTT-----AAKDDSTFYRLKEKY--FIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FG+ D F + +G + + GY++++ L+Y GG A V
Sbjct: 94 FGVEAQGDWGRARGTSDSLLFANQTNRTLIDAFGLINGRFGYALNNALLYVKGG---AGV 150
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + +D +G GL+ + IS++A Y +I V
Sbjct: 151 VQEKYDVFATDTGVT-FTNASETRWGSTVGAGLELAFSEHISVAAEYNHIFLGSRDV--- 206
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
+ + + + +L +N F
Sbjct: 207 AFAPTGDIYRIRQDLDVLALKLNYRF 232
>gi|209548422|ref|YP_002280339.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534178|gb|ACI54113.1| porin [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 204
Score = 76.4 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 60/204 (29%), Gaps = 24/204 (11%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEY-QDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++ LA+ +P Q WSG Y+G + +
Sbjct: 5 LIACAVLALSAAVPAVAADLTYETPAPAAEQISSAYNWSGFYLGGQGGYSWSQTKIL--- 61
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT--AAKDDSTFYRLKEKYFIYGDVVL 134
+ ++ G+ G+N Q + V+GI K+D
Sbjct: 62 --GSDENIDGGTAGLHAGYNFQSGNIVYGIENDFNYNFKKNDDANLEWDASG------RA 113
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY+++ L + + + G+ DG G G+++ V
Sbjct: 114 RVGYALNRTLFF----------ATAGVAAGGGKVDIPTAGKKDGILIGWTAGGGIEHAVT 163
Query: 195 YDISLSASYRYIPHHIHSVNNSNA 218
I + YR+ ++
Sbjct: 164 DHILVRGEYRHSDFSNKDFGSAIG 187
>gi|222102056|ref|YP_002546646.1| hypothetical protein Arad_12130 [Agrobacterium radiobacter K84]
gi|221728173|gb|ACM31182.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 205
Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 51/178 (28%), Gaps = 19/178 (10%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+++ E Q WSG Y+G + SL G +G+N
Sbjct: 27 DQSAPQPEQQAYSAYNWSGFYLGAQGGYSW-----NKAKYLGADQSLNTGSAGAHVGYNF 81
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q + ++GI D K + GY++D
Sbjct: 82 QTGNIIYGIENDFNYNFDKGN----KADLQWDASGRARVGYALDRT----------LLFA 127
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ L A G+ D G G++ + +I + YRY +
Sbjct: 128 TAGLAAAGGKVDAPAIGKKDDILIGWTAGAGVERALTDNILIRGEYRYSDFGKKDFGS 185
>gi|86748027|ref|YP_484523.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2]
gi|86571055|gb|ABD05612.1| outer membrane autotransporter [Rhodopseudomonas palustris HaA2]
Length = 638
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 17/201 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNS-LLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G +VG L T + G ++G++ Q +V G+ A
Sbjct: 434 WTGFFVGGSFGVLNGRTDWTFQPGGTTTDPRFAGAIGGGQIGYDYQFGKWVVGVEGALNA 493
Query: 113 AKDD-------STFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKV 164
+ S F+ + G K GY+ D L Y GG + ++
Sbjct: 494 TNANGARPCPSSVFFTCETNVSWMGTATAKLGYAFWDRSLWYVRGGGAFGDLKVTTTCNT 553
Query: 165 ESDN---SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
N + +GIG ++ ++ + ++ Y + D
Sbjct: 554 GPFNPLGLAGCGENASRSRAGWTIGIGSEFALSKNWTVRTETNYFDMGRERYVLPTSTID 613
Query: 222 VERVDRKGNAHIASLGINMHF 242
V++ N I+++G+N F
Sbjct: 614 VKQ-----NGFISTVGVNYRF 629
>gi|323139010|ref|ZP_08074070.1| porin [Methylocystis sp. ATCC 49242]
gi|322395764|gb|EFX98305.1| porin [Methylocystis sp. ATCC 49242]
Length = 294
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/241 (16%), Positives = 72/241 (29%), Gaps = 51/241 (21%)
Query: 53 IWSGNYVGLH--------------------ISRLYETHPLADTINRKTYNSLLPNGLGI- 91
+W+G YVGL+ + ++ +G
Sbjct: 43 MWTGFYVGLNAGGTFGASGGTSTESWGVLNGGSPIHGWAAGLSATSAPTSNNNSGFIGGG 102
Query: 92 ELGHNIQL-EDFVFGINCHTTAAKDDSTFYRL-------------------KEKYFIYGD 131
++G+N Q F+ G+ +S + + G
Sbjct: 103 QIGYNWQFMNSFLVGVEADIQGVAGNSGSQNIFGASSDPFTGTTFATFGTRSSRLDYLGT 162
Query: 132 VVLKAGYSVD-SLLIYGMGGFGGAYVIDSS---LEKVESDNSKNAKGRFDGHGSSVVLGI 187
V + G+ +LL+YG GG V +S ++ S F G
Sbjct: 163 VRGRLGWLFTPTLLVYGTGGLAYGGVSTNSSFVTSELGIGLSSVGGTTFADTRVGWTAGG 222
Query: 188 GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV------ERVDRKGNAHIASLGINMH 241
G ++M + S Y Y S + ++ + V + + HI G+N H
Sbjct: 223 GFEWMFMPNWSAKVEYLYYDLGTVSASGASIEPVVGDWGFSTTTRTRFDGHIVRAGLNYH 282
Query: 242 F 242
F
Sbjct: 283 F 283
>gi|188584272|ref|YP_001927717.1| porin [Methylobacterium populi BJ001]
gi|179347770|gb|ACB83182.1| porin [Methylobacterium populi BJ001]
Length = 274
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 88/279 (31%), Gaps = 55/279 (19%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
+L + ++ + +LA DL PR+ + + W+G Y+G++ Y
Sbjct: 4 SLILIGLTGALLSSTALAADL--PRRAEP-------PVFTPIPVFAWTGAYLGINAGYAY 54
Query: 68 ETHPLADTINRKTYNSLLPNG--------------LGIELGHNIQLED---FVFGINCHT 110
T + + N +G + G+N QL FVFG+
Sbjct: 55 TESDTLRTAGIGALQANVTNDLRRAAVGLPQDGFTVGGQGGYNFQLTPGTGFVFGLEVDA 114
Query: 111 TAAKDDSTF---------------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ G V + GY+ D +L+YG GGF AY
Sbjct: 115 QYMDLQRSRTETIFRPAFNPNVLTNVYAADLDFLGTVRGRIGYAFDRVLVYGTGGF--AY 172
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRY 205
S ++ G G + G G++Y + + ++L Y
Sbjct: 173 GTVSQGVTFQTGAPVTYAGARSGVETGYAYGGGIEYALPTDSFLNVFRSEAVTLKGEYLR 232
Query: 206 IPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + V + IA G+N F
Sbjct: 233 YDLGSRTLLVGTTGGPGVGYNVTFRTEGAIARAGLNFKF 271
>gi|323138453|ref|ZP_08073522.1| porin [Methylocystis sp. ATCC 49242]
gi|322396249|gb|EFX98781.1| porin [Methylocystis sp. ATCC 49242]
Length = 502
Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 64/220 (29%), Gaps = 31/220 (14%)
Query: 52 GIWSGNYVGLH--ISRLYETHPLADTINRKTYNSL------LPNGLGIELGHNIQLED-F 102
W+G ++G + +A + +G ++G++ Q E+
Sbjct: 38 FSWTGFHLGFNRGFGGAVSEARVALAAPGLGGTATRTFDQASGWFVGGQIGYDYQFENGV 97
Query: 103 VFGINCHTTAAKDDS--------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
V G+ + S T +G + GYS +L Y
Sbjct: 98 VLGVETDMQWSDIRSSHQATTIASNPLLLTNADTSHSLDWFGTTRGRVGYSFGRMLPYLT 157
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY--I 206
GG V + + + R G GLD+ ++ +S A Y Y +
Sbjct: 158 GGVAYGQVEARGAQALAAGLVSVGGARET--NVGWAAGAGLDFALSPRLSARAEYLYLQL 215
Query: 207 PHHIHSVNNSNAKSDVERV----DRKGNAHIASLGINMHF 242
P V AH+ G+N F
Sbjct: 216 PGVSGPAVGLTPPPLPPLVGSFSTGLVEAHMVRGGMNYRF 255
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 20/157 (12%)
Query: 102 FVFGINCHTTAAKDDS-------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
FV G+ + + F +G + G + L Y
Sbjct: 338 FVVGVETDAQWSGVQAWHQATTVGGPNGYVFTDTPNAMTWFGTTRARLGLARGYSLSYVT 397
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG + S + + + +G G +Y + ++SL A Y Y+
Sbjct: 398 GGVAYGEITASGTQAAGALFTGAGAR----SQVGWTVGSGTEYALAPNLSLRADYLYVSF 453
Query: 209 -HIHSVNNSNAKSDVERVDRKGNA--HIASLGINMHF 242
+ A + G H+ +G+N F
Sbjct: 454 AGVSGPAAGIAPAPFAGAFSTGRFATHVTRIGLNWRF 490
>gi|323138252|ref|ZP_08073324.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322396504|gb|EFX99033.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 255
Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 80/253 (31%), Gaps = 38/253 (15%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEY--QDDEYGIWSGNYVGLHISRLY------ 67
++ SLAV Y +W+G Y G++I +
Sbjct: 3 KTLLTAVSLAVLAAGSAFAADLPSRKEAPVYVPPPPPPPMWTGFYAGVNIGGGWDAGNGN 62
Query: 68 -ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLK-- 123
L T N G ++G+N Q+ F+ G+ S
Sbjct: 63 GNAWNLFGANGGVTNNMSGGVVGGGQVGYNYQITPMFLVGVETDFQGTSMGSGMNNNNWL 122
Query: 124 ---------EKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+G V +AG ++ +LL+YG GGF A V +N
Sbjct: 123 WGWNGRAQGTSLDWFGTVRGRAGVTITPTLLVYGTGGFAYAGV------------QRNGG 170
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN----SNAKSDVERVDRKG 229
+ + G G+++M + S A Y Y NN +NA + +
Sbjct: 171 FQTSATQTGWTAGGGVEWMFMPNWSAKAEYLYTDVSGGGTNNWWFQNNAGLGLNSTNNHT 230
Query: 230 NAHIASLGINMHF 242
+ G+N HF
Sbjct: 231 RWNTIRAGVNYHF 243
>gi|49475067|ref|YP_033108.1| hemin binding protein a [Bartonella henselae str. Houston-1]
gi|2150037|gb|AAC39274.1| Pap31 [Bartonella henselae phage 60457]
gi|49237872|emb|CAF27068.1| Hemin binding protein a [Bartonella henselae str. Houston-1]
Length = 279
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 90/291 (30%), Gaps = 72/291 (24%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
+L ++++ + + A D+ +P ++ W+G Y+G +
Sbjct: 5 SLMTTSVIALISASAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFS 56
Query: 68 ETHPLADTINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHT--------- 110
+ D N+K ++ P+G GI G N+ L + + G+
Sbjct: 57 SKVEITD-PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAK 115
Query: 111 ---------------------------------TAAKDDSTFYRLKEKYFIYGDVVLKAG 137
A D L K G ++ G
Sbjct: 116 TSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIG 175
Query: 138 Y-SVDSLLIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ + D ++ Y GG A V S KV +++ + LG G+D+
Sbjct: 176 FTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDF 235
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ L A YRY K + E + + +G+ F
Sbjct: 236 AMTDNVLLRAEYRYSDFGKK-------KFEKEGSEFSYKTNDFRVGVAYKF 279
>gi|27383307|ref|NP_774836.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27356481|dbj|BAC53461.1| bll8196 [Bradyrhizobium japonicum USDA 110]
Length = 278
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 54/202 (26%), Gaps = 38/202 (18%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNS------------------------LL 85
W+G Y+G + + T + + L
Sbjct: 43 PLFSWTGGYIGGSVGSGWGTSQTDLAVGNTFIGAPVNQTVNQLIGGTADLNVPLPQVQLN 102
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL-----KEKYFIYGDVVLKAGYSV 140
G++ G+N Q V+G+ + D+ + G +V
Sbjct: 103 GFLGGVQAGYNFQSGVMVYGVESDFLWSGIKGRTGCFVVLNCTNDTKWIADITGRVGVTV 162
Query: 141 -DSLLIYGMGGFGGAYV--------IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
D L+Y GG A +S + A GR + LG G++Y
Sbjct: 163 GDRGLVYIKGGAAWADSSIGINQSFAVTSNLGAGFAANGAADGRATKNIFGGTLGAGIEY 222
Query: 192 MVNYDISLSASYRYIPHHIHSV 213
S Y Y V
Sbjct: 223 AFLPGWSAKVEYDYFDFGRQDV 244
>gi|153007477|ref|YP_001368692.1| porin [Ochrobactrum anthropi ATCC 49188]
gi|151559365|gb|ABS12863.1| porin [Ochrobactrum anthropi ATCC 49188]
Length = 229
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 71/212 (33%), Gaps = 26/212 (12%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED 101
W G Y+G I + L D ++ N PNG G+ G+N + +
Sbjct: 31 PAPMAAPAFSWGGAYIGGEIGWGWGRAKLDDKSTDQS-NEFKPNGFIGGVYAGYNFDMGN 89
Query: 102 FV-FGINCHTT----------AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
V G++ + + ++ + K G V +AGY+VD + Y GG
Sbjct: 90 NVILGVDGNFDYNDLKKSHDYISNSNAVQTSAETKLQWSGAVRARAGYAVDRFMPYIAGG 149
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
V +S N + D + +G G+DY ++ L YRY
Sbjct: 150 VAFGGVKNSL-------NVGGSDYNNDKTLTGWTVGTGVDYAATDNVLLRLEYRYTDFGN 202
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N + LG+ F
Sbjct: 203 KDFDLGN-----TATRGSFKTNDIRLGVAYKF 229
>gi|144898146|emb|CAM75010.1| outer membrane protein Omp31 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 256
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 69/232 (29%), Gaps = 36/232 (15%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN----------------GL 89
Q WSG Y+G + T+ + Y + +
Sbjct: 23 AQSAPTVDWSGFYIGGLVGATNSQTQAKTTVGYQKYLNATDARQMAQAGDSDLSQWQPSV 82
Query: 90 GIELGHNIQLEDFVFGINCHTTA--AKDDSTFY-------------RLKEKYFIYGDVVL 134
G+ G+ Q + G+ + D+ T R + +
Sbjct: 83 GLVGGYGKQFGHVLLGLEASANSIYLNDERTVSENYVSTPASRFILRQSVRADWMATLRP 142
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ G++ D+ L Y GG + +L V++ S +K + LG G +Y ++
Sbjct: 143 RLGWAEDNWLGYVTGGLSVTQLQLDTL-FVDNAFSGYSKSSDTKIRTGWSLGFGGEYALS 201
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA----HIASLGINMHF 242
+L Y Y + ++ A H +G+ F
Sbjct: 202 GGWALRGEYLYTNFGALKSMSETTSTNDSGGSLAHKAELDTHAVMVGLTYRF 253
>gi|296447762|ref|ZP_06889677.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
gi|296254739|gb|EFH01851.1| Carbohydrate-selective porin OprB [Methylosinus trichosporium OB3b]
Length = 732
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 70/219 (31%), Gaps = 27/219 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL--------PNGLGIELGHNIQLED 101
+W G ++G++ + L +G ++G++ + +
Sbjct: 38 PPTLWEGMHIGVNAGAGFPLSSGGRLEGFGADAFGLAAPSHDRAGASIGAQIGYDWRKGE 97
Query: 102 FVFGINCHTT--AAKDDSTFYRLKEKYFIYG--------------DVVLKAGYSVDSLLI 145
V+G+ + +T F G + + G + L+
Sbjct: 98 IVYGVETDFNYLGLRRAATGLFAAPSSFGLGGYALTADESSNSFMSLRGRLGRAYGPWLV 157
Query: 146 YGMGGFG-GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
YG GG G + S+L ++ S +A +G G+ + S Y
Sbjct: 158 YGTGGVAAGGWRGASNLARLPSLALYSA-PLSQSSRMKYAIGAGVQRALGDHWSARLEYL 216
Query: 205 YIPHHIHSVNNSNAKSDVERVDRK-GNAHIASLGINMHF 242
Y+ A++ + R+ +HI G++ F
Sbjct: 217 YLNQQSQKQLYETAEATPPFLARQRSESHILRFGLDYRF 255
>gi|323137744|ref|ZP_08072820.1| porin [Methylocystis sp. ATCC 49242]
gi|322397041|gb|EFX99566.1| porin [Methylocystis sp. ATCC 49242]
Length = 506
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 68/220 (30%), Gaps = 32/220 (14%)
Query: 53 IWSGNYVGLHISRLYETHPL---------ADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
+W+ Y+G + + T N G + G+ + F
Sbjct: 37 LWTSFYIGFNRGFGGGVLDSDVGFVSAVPGLSTATTTTNRASGFIAGGQFGYTYSFANHF 96
Query: 103 VFGINCHTTAAKDDS--------------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
V G+ + S T + +G +AGYSV LL Y
Sbjct: 97 VLGLESDFQWSDMRSSHQATTFATNPALITNADIHSGIDWFGSTRARAGYSVGRLLPYVT 156
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
GG V S ++ + S + +G G+++ +N ++S A Y Y+
Sbjct: 157 GGVAYGQVQSSGVQFLGSGLATTGSRTNT--RVGWAMGGGIEFALNSNLSAKAEYLYLYL 214
Query: 209 HIHSVNNSNAK----SDVERV--DRKGNAHIASLGINMHF 242
+ + + + HI G+N F
Sbjct: 215 PGVGGGATGVGAPPVTPMAGSFRTNSVDVHIVRSGLNYKF 254
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 60/186 (32%), Gaps = 28/186 (15%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKT----------YNSLLPNGLGIELGHNI 97
+ W+G YVG++ + T + N G + G+N
Sbjct: 274 SEPSYDWTGFYVGINGGYGGGVVTGSTTFVQPGAPGLAETTTASNRTAGYVGGAQGGYNY 333
Query: 98 QL-EDFVFGINCHTTAAKDDST-------------FYRLKEKYFIYGDVVLKAGYSVDSL 143
QL ++ V G+ + + + +G L+AGY+ +
Sbjct: 334 QLTKNIVVGVETDAQWSDVKAQHQAATIGGPLGFVYTNTPNDVSWFGTTRLRAGYASGNA 393
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
L Y GG V + +A + + LG G Y + ++S+ A Y
Sbjct: 394 LSYVTGGVAYGEVNAHGSQISGGVFGGSA----SQNKAGWALGGGAMYALTKNLSMRAEY 449
Query: 204 RYIPHH 209
Y+
Sbjct: 450 LYVSFS 455
>gi|254563933|ref|YP_003071028.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|254271211|emb|CAX27223.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 274
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 86/279 (30%), Gaps = 55/279 (19%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
+L I++ +LA DL PR + + W+G Y G + Y
Sbjct: 4 SLILSGLAGILLSGTALAADL--PR-------RAEALVFTPIPVFAWTGAYFGPNGGYAY 54
Query: 68 ETHPLADTINRKTYNSLLPN--------------GLGIELGHNIQLED---FVFGINCHT 110
T + + N G + G+N QL FVFG
Sbjct: 55 TESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVFGFETDA 114
Query: 111 T---------------AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
A + G V + GY+ D +L+YG GGF
Sbjct: 115 QYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAFDRVLVYGTGGFAYGT 174
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD----------ISLSASYRY 205
+++ + G G + G G++Y + + +++ A Y
Sbjct: 175 TTLAAV--FRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVKAEYLR 232
Query: 206 IPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V ++ ++ + +A +G+N F
Sbjct: 233 YDLGSRTVLIRSTGGPGVGYNIESRTEGALARVGLNFGF 271
>gi|77917690|ref|YP_355505.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM
2380]
gi|77543773|gb|ABA87335.1| outer membrane immunogenic protein [Pelobacter carbinolicus DSM
2380]
Length = 225
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 18/205 (8%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFG 105
+ +SG Y+G + + +D+ N + G G+ GHN +++ + G
Sbjct: 29 AEALSDYSGPYIGGFVGHSWADLEYSDSWNPGYDLNADIEGFVGGLYFGHNYMIDNIMLG 88
Query: 106 INCHTT------AAKDDSTFYRLKE-KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
A ++++ + +AG+ ++ L Y GG A
Sbjct: 89 FEADAGIGDLGEGADKNNSYNDWSAFDIDWDAHLRARAGFVYNTTLFYVAGGLAVA---- 144
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
KV D++ + G + +G G++ + ++ Y Y + S + ++
Sbjct: 145 ----KVAVDDTDSGYGGDNATHFGWTIGAGIEQKITEHLTARIEYLYDDYGSESYSIEDS 200
Query: 219 -KSDVERVDRKGNAHIASLGINMHF 242
D D H A LG+ F
Sbjct: 201 WWGDTYSADIDLEIHTARLGLAYSF 225
>gi|163849581|ref|YP_001637624.1| porin [Methylobacterium extorquens PA1]
gi|163661186|gb|ABY28553.1| porin [Methylobacterium extorquens PA1]
Length = 283
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/278 (19%), Positives = 82/278 (29%), Gaps = 56/278 (20%)
Query: 19 VPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN- 77
V S A + + + + WSG Y G+ + T +
Sbjct: 5 VLARSAAAFVSTAAVAADLPQREQTPVFAQIPAFTWSGFYAGIAAGYAFSGRQTVRTTDF 64
Query: 78 -------------RKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTTAAKDDST--- 118
+ + G+N Q FV GI DS+
Sbjct: 65 TPIGQAVLAASGFGAVRSEQEGATVAGGFGYNYQFTPGTGFVAGIETDIQYTDLDSSRAT 124
Query: 119 ---------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES--D 167
F ++ G V + GY+ + +L+YG GGF V V S
Sbjct: 125 SASVGGTTFFLSGRQSLNFLGTVRGRLGYAFNRVLVYGTGGFAYGNVNYEINANVTSALG 184
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSN 217
GRF+ + V G G++Y + + + A Y + SV NS
Sbjct: 185 TIPFDAGRFNNVETGYVYGGGVEYAMPTESFLNFFSANAVIIKAEYLHYDLGSRSVFNSG 244
Query: 218 -------------AKSDVERVDRKGNAHIASLGINMHF 242
+ V R +GN I G+N F
Sbjct: 245 VGPVFGPGGSLAVGLTSVSRFRTEGN--IVRAGVNYKF 280
>gi|148253089|ref|YP_001237674.1| OmpA-like transmembrane domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|146405262|gb|ABQ33768.1| OmpA-like transmembrane domain protein [Bradyrhizobium sp. BTAi1]
Length = 598
Score = 75.2 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 21/171 (12%)
Query: 80 TYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTA----------AKDDSTFYRLKEKYFI 128
+S+ G++LG+N +L V G+ + + R+ EK
Sbjct: 4 FKSSVGSLFGGLQLGYNRELPSRVVLGVETDLSFPNYLDFDDIIWSGVNANGRVTEKVDY 63
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
YG + + GY+ LIY G + + A + G + V G G
Sbjct: 64 YGSLRGRIGYAPARWLIYATAGLAYSQGRLTEDPF------DPATQKKIGFRAGWVAGAG 117
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
++ V+ + + Y Y +V + S + H LG+N
Sbjct: 118 VEAPVDGNWTARIEYLYSNFGSLNVMLPSGTS----YGSTFDLHTVRLGLN 164
>gi|15888468|ref|NP_354149.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|18139945|gb|AAL60203.1|AF445083_1 outer membrane protein [Agrobacterium tumefaciens str. C58]
gi|15156164|gb|AAK86934.1| outer membrane protein [Agrobacterium tumefaciens str. C58]
Length = 218
Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 72/217 (33%), Gaps = 32/217 (14%)
Query: 35 DLFNEADNNVEYQDDEYG--IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE 92
D NE D WSG Y+G ++ + + G G+
Sbjct: 25 DAVNEVPQAPVAYDQPAAVKDWSGAYLGGTVNYDWGRFSSS-----NDGRDAKGFGGGVY 79
Query: 93 LGHNIQLEDFVFGINCHTT-----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G+N+Q V+G + ++ K + G + + GY ++ L+YG
Sbjct: 80 GGYNMQSGQIVYGAEADVNMGDEKGSAGTVAGRAVEGKQGVNGSLRGRVGYDMNPFLLYG 139
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G V + ++ + +G G++ MV +I+ YRY
Sbjct: 140 TAGLA-----------VSDNKVRDGVNKDSATALGYTVGAGVEAMVTDNITARLEYRYSD 188
Query: 208 H--HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +++ N R + H GI + F
Sbjct: 189 YQKKDYTLGNDAFS-------RGFDDHSVKAGIGVKF 218
>gi|27380285|ref|NP_771814.1| hypothetical protein blr5174 [Bradyrhizobium japonicum USDA 110]
gi|27353449|dbj|BAC50439.1| blr5174 [Bradyrhizobium japonicum USDA 110]
Length = 256
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 66/210 (31%), Gaps = 21/210 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG----LGIELGHNIQLEDFVFG 105
W+G Y+G + + T + +G ++G+ Q FV G
Sbjct: 40 PIYDWTGFYIGANGGWGQSRGCVDFVTLAGTVAGGCASRSGGLVGGQIGYRWQTNQFVLG 99
Query: 106 INCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
+ A +T L K G + G++ ++ L+Y GG +
Sbjct: 100 LEAQGDWADIKNTRVSLIDPLLSTTGKTDGIGLFTAQLGWAWNASLLYVKGGAAVTH--- 156
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN---- 214
+ V ++ + LG+G +Y + S+ Y ++ +
Sbjct: 157 -NRLDVFNNLTGVGLDSASHTRWGGALGVGWEYGFAPNWSVGVEYDHLWMGNDNRTFAGA 215
Query: 215 --NSNAKSDVERVDRKGNAHIASLGINMHF 242
S + + + ++ +N F
Sbjct: 216 GVLSPGGVTLLGDRVSQDVDMVTVRLNYRF 245
>gi|296446925|ref|ZP_06888861.1| porin [Methylosinus trichosporium OB3b]
gi|296255600|gb|EFH02691.1| porin [Methylosinus trichosporium OB3b]
Length = 429
Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 18/197 (9%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTT--- 111
G G+ + AD + + L G+ LG++ +L F+ G +
Sbjct: 228 GPSFGVLVGTAVGDGAFADPVPMQG-AGFLG---GLRLGYDFKLTPRFLVGFETDSQYRS 283
Query: 112 --AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD-- 167
+S + G + GY +D +YG GG ++ + S+
Sbjct: 284 DLGGGSNSHGSISGVRGGYLGTFRGRLGYVIDRWTVYGTGGLAYGHI-LAPRTFSGSNLI 342
Query: 168 --NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY--IPHHIHSVNNSNAKSDVE 223
+ +G G+ + + +SL A Y Y + H + S + V
Sbjct: 343 NSIPTTGVSQSYQLVPGWTVGAGVQFALAPGLSLRAEYLYTQLQHSNPTYMTSVSPYPVT 402
Query: 224 RVDRKGNAHIASLGINM 240
V K H +G++
Sbjct: 403 -VCTKSAMHGVRVGVDF 418
>gi|75674527|ref|YP_316948.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255]
gi|74419397|gb|ABA03596.1| carbohydrate-selective porin OprB [Nitrobacter winogradskyi Nb-255]
Length = 674
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 61/200 (30%), Gaps = 23/200 (11%)
Query: 53 IWSGNYVGLHISRLY--ETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCH 109
WSG YVG H L D N GI+ G+N++L + G+
Sbjct: 57 DWSGFYVGGHAGFGGGRSAATLFDPAPAAGRNVFGGLIGGIQAGYNVRLPSGLLLGLEAD 116
Query: 110 TTA----------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ + + + ++ G + GY+ L Y GG A
Sbjct: 117 VSFPSYIESNSFVSGLATARSDITHQWDFIGTARARFGYAAGPWLAYATGGLAFAG---- 172
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
++ +D + + V G GL+Y S Y + V +A
Sbjct: 173 --DRYLNDLPSGDQEKMLDARFGWVAGAGLEYAFAPYWSARLEYLHYQFEGTGVQFPSAA 230
Query: 220 SDVERVDRKGNAHIASLGIN 239
N +G+N
Sbjct: 231 QYAA----TMNFQSIRVGLN 246
>gi|146340933|ref|YP_001205981.1| putative outer-membrane protein [Bradyrhizobium sp. ORS278]
gi|146193739|emb|CAL77756.1| putative outer-membrane protein; putative secreted protein
[Bradyrhizobium sp. ORS278]
Length = 251
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 19/180 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLEDFV 103
WSG Y+GL+ + + + G G ++G+ Q +V
Sbjct: 40 YDWSGFYLGLNAGGGSARTCWTNNVTVGGVAATNAEGCHDATGALAGGQIGYRWQAGSWV 99
Query: 104 FGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FG+ A + + K G + + GY+ +++L Y GG A
Sbjct: 100 FGVEGQGNWANLKGSNTSQLAPAVTNQTKVNGVGLLTGQIGYAWNNVLWYVKGGAAVAGE 159
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ L + + A + +G G++ + S+ A Y +I ++N S
Sbjct: 160 KYNGL----ATATGTAFDQASATRWGATVGTGVEVGFAKNWSVGAEYEHIFMGNKNLNFS 215
>gi|323135881|ref|ZP_08070964.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322398972|gb|EFY01491.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 283
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 73/232 (31%), Gaps = 41/232 (17%)
Query: 52 GIWSGNYVGLHISR-------LYETHPLADTINRKTYN---SLLPNGLGIELGHNIQLED 101
W+G Y G++I + ++ T+ S G ++G+N Q
Sbjct: 40 FTWTGLYGGVNIGYSFNAGGAGWGYFADPLLLSGATWTANPSAQGVIGGGQIGYNYQYSP 99
Query: 102 F-VFGINCHTTAAKDDSTFYRLKEKY--------------FIYGDVVLKAGY---SVDSL 143
+ V G AA +S +G V + G S +L
Sbjct: 100 WLVIGAEADIQAADINSQQNNWMPSNWFGGLAALNTNKYVDWFGTVRGRLGLVMPSYPNL 159
Query: 144 LIYGMGGFGGAYVIDS----SLEKVESDN--SKNAKGRFDGHGSSVVLGIGLDY--MVNY 195
++YG GF YV ++ + ++ + + G G+++ M
Sbjct: 160 MVYGTAGFAYGYVSNTVSVANYPFAAFPVPFAQTGQTTSGNTNTGWTAGGGVEWTPMAFP 219
Query: 196 DISLSASYRYIPHHIH-----SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
SL Y Y + SV + A + H G+N HF
Sbjct: 220 AWSLKVEYLYTDLGVTNQSFFSVFTNTATNFTAANQSPTRFHTVRAGLNWHF 271
>gi|323139376|ref|ZP_08074427.1| porin [Methylocystis sp. ATCC 49242]
gi|322395369|gb|EFX97919.1| porin [Methylocystis sp. ATCC 49242]
Length = 293
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 73/253 (28%), Gaps = 59/253 (23%)
Query: 49 DEYGIWSGNYVGLHISRLYE--------THPLADTINRKTYNSLLPNGL----------- 89
+W+G Y+GL+ + T P+ D I + G
Sbjct: 30 PPPPLWTGFYLGLNAGGAWSDNNSVQTATFPIFDAIPAGYGTTSAILGTFSAPANASGFI 89
Query: 90 -GIELGHNIQLED-FVFGINCHTTAA---------------------KDDSTFYRLKEKY 126
G ++G++ Q FV G+ S + +
Sbjct: 90 GGGQIGYDYQFGGAFVAGVEADIQGVASSDGSSSVAGAAFNPVVLGGSTASQLATVGKSL 149
Query: 127 FIYGDVVLKAGYSVDSLLI------YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
G + GY V L+ GG I S V + A G + G
Sbjct: 150 DYLGTARGRLGYLVTPTLLVFGSSGLAYGGVSANTSIFQSYTPVAGATNIFASGSYSGAR 209
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV-----------DRKG 229
+ G GL++M + S A Y Y + + + S V V
Sbjct: 210 AGWTAGGGLEWMFVPNWSAKAEYLYYDLGNVTYSVAPMVSTVIGVGALAFSGASHSSTSF 269
Query: 230 NAHIASLGINMHF 242
+I G+N HF
Sbjct: 270 RGNIVRAGVNYHF 282
>gi|319405138|emb|CBI78744.1| Pap31 [Bartonella sp. AR 15-3]
Length = 278
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 88/282 (31%), Gaps = 69/282 (24%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA- 73
++++ + A D+ +P+++ W+G Y G I +
Sbjct: 12 VALMTASAVQAADITVPQEVGE--------TIVVAPAFSWTGFYFGGQIGGFSSKTSFSS 63
Query: 74 ---------DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT------------- 110
D++N+ ++ G G N+ L + + G++
Sbjct: 64 RDAEDLNKWDSLNKALWSKPSGFMGGFYAGSNVDLGNGLILGVDTDIVLSGQKDTKEHTV 123
Query: 111 ------------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
A + + T Y K G ++ G++ D ++ Y GG
Sbjct: 124 AVELKDQNAKQQREEQPENAKEAEITKYNHTLKEKWAGATRVRIGFAADRIMPYVAGGVA 183
Query: 153 GAYVIDSSLEKVESD------------NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ D+ V +S+ L G+D+ + ++ L
Sbjct: 184 YTQLQDTLETSVSQGKMPVQRNDETETSSQTNTVDESKTMIGYTLAAGVDFAMTDNVMLR 243
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
A YRY ++N ++++ A+ +G+ F
Sbjct: 244 AEYRYSDFGKKKLHN-------DKLEVSYKANDFRVGVAYKF 278
>gi|148255738|ref|YP_001240323.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407911|gb|ABQ36417.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 260
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 20/209 (9%)
Query: 54 WSGNYVGLHISRLYETHPLADT---------INRKTYNSLLPNGLGIELGHNIQLEDFVF 104
W+G Y+G + + + + ++ +G ++G+ Q +VF
Sbjct: 44 WAGFYLGANGGADWSRNCWTLNRVNGVPVVPTQSEGCHNATSGLIGGQIGYRWQAASWVF 103
Query: 105 GINCHTTAAK---------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
G+ + K G + GY+ ++L Y GG A+
Sbjct: 104 GLEAQGNWTDLKSSNASSAAFAAGITNNTKTDAIGLFTGQIGYAWGNVLWYVKGGAAVAH 163
Query: 156 VIDSSLEKVESD-NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + +G G+++ + S++ Y ++ +
Sbjct: 164 NKYTGTANAAAPVAVGTLLDSASETRWGGTVGTGVEFGFAPNWSVAVEYDHLFMGSRDIT 223
Query: 215 NSNAKSDVERVDR-KGNAHIASLGINMHF 242
RVD K + +A++ +N F
Sbjct: 224 FPATAIVNARVDTIKQDIDMATVRVNYRF 252
>gi|134095715|ref|YP_001100790.1| hypothetical protein HEAR2547 [Herminiimonas arsenicoxydans]
gi|133739618|emb|CAL62669.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 278
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 59/222 (26%), Gaps = 39/222 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y A ++ + +S +G LG+N G+
Sbjct: 60 GYFAGVGGDASGAIAQASSLTGRYASSHKGGAVGAHLGYNWPSGKIFLGLESDIQFTDLK 119
Query: 117 -------------------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
S R + + GY D L+YG GG V
Sbjct: 120 DNAALNTINPVTGYPGNPMSANVRQVNTVDYLVTLRGRIGYVNDQWLLYGTGGVAVGRVN 179
Query: 158 DS--------SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ S + D+ VLG G +Y + + ++ Y Y
Sbjct: 180 TNINYKGSYLSAPTIVFDDLNAGSRS---TRLGFVLGAGAEYAIAKNWAVRVEYLYYDLG 236
Query: 210 IHSVN-NSNAKSDVERVDRKGNA--------HIASLGINMHF 242
S + N +++ +A +GI+ F
Sbjct: 237 KSSQSYNVTSRAPATGFVASSSALATTDWTLSTLRVGISYRF 278
>gi|319957414|ref|YP_004168677.1| porin [Nitratifractor salsuginis DSM 16511]
gi|319419818|gb|ADV46928.1| porin [Nitratifractor salsuginis DSM 16511]
Length = 220
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 23/203 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGIN 107
WSG YVGL ++ + G G+ G+N L DF+ G+
Sbjct: 31 PADSWSGFYVGLQAGGIWGNADVNIPAYPSNFSLDPDGFGGGVYAGYNWLLENDFLIGLE 90
Query: 108 CHTTAAKDDSTFY-------RLKEKYFIYGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDS 159
D + K + ++L+ G +D + Y GG + S
Sbjct: 91 VAGNFISADDEGLSGGMGGEKYKVEQNWDAAILLRIGKVIDDTWMPYVTGGVAWTELETS 150
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ + K+ +G G++ + +I YRY + ++
Sbjct: 151 YIPDGGWGSKKDTVN-------GWTIGAGVEMKLTTNIHARIEYRYTDYDTAQFVHAGPS 203
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ N + +GI+ F
Sbjct: 204 ------NVDYNDNRVMVGISYRF 220
>gi|296447741|ref|ZP_06889657.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
gi|296254773|gb|EFH01884.1| OmpA domain protein transmembrane region-containing protein
[Methylosinus trichosporium OB3b]
Length = 248
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 55/198 (27%), Gaps = 10/198 (5%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF-GINCHT 110
W G Y+G L +T G +G+N + GI
Sbjct: 41 FSWRGFYLGGFAGALLGDGTFTYF--EQTPMRGAALVGGGTIGYNWMWTPTLLVGIEADF 98
Query: 111 TAAKDDST-----FYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKV 164
+ Y + G + GY+ L Y GF
Sbjct: 99 GYRGQVYSERVNRVYPGPTDGGVLGTARARLGYAFAPRWLSYATAGFAYGTDFPPRGFTS 158
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + + G G++Y + IS+ A Y Y+ V S V
Sbjct: 159 TMPLTFGVQNTGTTVRAGWTAGAGVEYAWSDLISVKAEYLYVRLADSGVAYSTNFGSVP- 217
Query: 225 VDRKGNAHIASLGINMHF 242
+ HI G+N HF
Sbjct: 218 LGVTSAGHIVRGGVNFHF 235
>gi|15420178|gb|AAK97311.1|AF308169_1 Pap31 [Bartonella henselae phage 60457]
Length = 239
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 84/247 (34%), Gaps = 65/247 (26%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ P+ + A D+ +P ++ W+G Y+G + + D
Sbjct: 1 IALISPSAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------------- 113
N+K ++ P+G GI G N+ L + + G+ A
Sbjct: 53 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAKVI 111
Query: 114 -------------KDDSTFYRLKE----------------KYFIYGDVVLKAGY-SVDSL 143
++ F + K K G ++ G+ + D +
Sbjct: 112 REDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRI 171
Query: 144 LIYGMGGFGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDIS 198
+ Y GG A V S KV D + FD + LG G+D+ + ++
Sbjct: 172 MPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVL 231
Query: 199 LSASYRY 205
L A YRY
Sbjct: 232 LRAEYRY 238
>gi|85713860|ref|ZP_01044849.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698986|gb|EAQ36854.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 224
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 24/190 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
W+G Y+G HI + N+ G+++G++ Q +VFG+ + +
Sbjct: 45 WTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEANYSF 104
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
S F G V + GY+ L+Y GG+G A ++
Sbjct: 105 LDTGSFFA-----NRGLGSVTGRLGYTWGPALLYVKGGYGWADSRFTNGFGGN------- 152
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G +G GL+Y+ + S Y+Y ++ + + + H
Sbjct: 153 -----GGRDGYTVGGGLEYLFTQNWSGKVEYQYYDLGTVNLVAPVVA------NFRNDQH 201
Query: 233 IASLGINMHF 242
+G+N F
Sbjct: 202 TVKVGLNYRF 211
>gi|319408047|emb|CBI81701.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 289
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 75/293 (25%), Gaps = 71/293 (24%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
V+ SI + A + W+G Y+G I
Sbjct: 6 VITASIFALVSASAAQ--AADMPVQERPTTVLPQVVVAPAFSWTGFYLGGQIGGFSSNSS 63
Query: 72 LADTI------------NRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
+ K + G+ G N+ + FV G++ + D +
Sbjct: 64 SKRIYQGVSKGKEDILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWSGDKAK 123
Query: 119 FYR----------------------------------------LKEKYFIYGDVVLKAGY 138
+ + G ++ G
Sbjct: 124 TSKSYDLPQTSDVQEVATRAEVSTGVPTLVEGADNNASRVTRNVTFSDKWSGATRVRLGA 183
Query: 139 SVDSLLIYGMGGFGG----AYVIDSSLEKVESDNSKNAKGRFDGHG-----SSVVLGIGL 189
+ D ++ Y GG A V ++ + + + +G LG G+
Sbjct: 184 AFDRIMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEGLSDSKTMVGYTLGAGV 243
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D+ + + L A YRY D VD K N +G+ F
Sbjct: 244 DFAMTDTVMLRAEYRYSDF-----GKKTFVKDKVEVDLKTND--FRVGVAYKF 289
>gi|325292505|ref|YP_004278369.1| outer membrane protein [Agrobacterium sp. H13-3]
gi|325060358|gb|ADY64049.1| outer membrane protein [Agrobacterium sp. H13-3]
Length = 218
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 67/201 (33%), Gaps = 26/201 (12%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
Q W+G Y+G + + + G GI G+N+Q V+G
Sbjct: 39 QPAPVKNWTGAYLGGTANYDWGRFSSS-----NDGRDAKGAGGGIYGGYNMQNGQIVYGA 93
Query: 107 NCHTT-----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+ ++ K + G + + GY ++ L+YG G +
Sbjct: 94 EADVNLGRERGSAGTVGGNAVEGKQGVNGSLRARVGYDMNPFLLYGTAGLAAS------- 146
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ ++A + +G G++ MV +I+ YRY + + D
Sbjct: 147 ----DNKVRDATSKDSATALGYTVGAGVEAMVTDNITARLEYRYSDYQ-----KKDYSLD 197
Query: 222 VERVDRKGNAHIASLGINMHF 242
R + H GI + F
Sbjct: 198 SGAFSRGFDDHSVKAGIGVKF 218
>gi|319403668|emb|CBI77253.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498]
Length = 262
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 78/265 (29%), Gaps = 51/265 (19%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEY-----------GIWSGNYVGLHISRLYETH 70
H L + + + AD +Q Y W+G YVG I
Sbjct: 5 HLLVACSWTFIPVSMVQAADIMKPHQSQSYQPVPVISSSNNFSWTGFYVGAQIGGFSGEA 64
Query: 71 PLADTIN-------RKTYNSLLPNGL-----GIELGHNIQLE-DFVFGINCH-------- 109
L+ + + ++ + L GI G N L D + GI+
Sbjct: 65 TLSPIQDSVEEDREGQGFSEIKSPKLSGFIGGIYAGSNFSLSKDLILGIDTDMVWSGKKN 124
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T + K G + ++ G+++D ++ Y GG + + K +
Sbjct: 125 TKVFDVQDMSIDMSIKEKWAGAMRMRVGFAMDRVMPYVSGGVSYVQLQNVFTAKRLAKAV 184
Query: 170 KNAKGRF------------DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ +G G+D + ++ + A YRY N
Sbjct: 185 VRERRNTLPSDSEPKFLDETKILVGYSVGGGVDVAMTDNVIMRAEYRYSDFGKKKFAKDN 244
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
VD + +G+ F
Sbjct: 245 -------VDLSYKTNDFRVGVAYKF 262
>gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4]
gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 24/194 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
W+G YVG T+ + + K S G + G+N+Q + V+G
Sbjct: 42 PVSNWAGAYVGGAG-----TYTMGRSHGSKF--SARAFGGQVYGGYNMQNDKIVYGGEAD 94
Query: 110 TTAAKDDS-TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ S + L K + G + + GY ++ ++YG G A S +S
Sbjct: 95 IGYDGNGSRSGAGLNGKQGVNGSIRGRVGYDLNPFMVYGTAGVAAADTKISGAGGSDSKA 154
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+G G++ MV +I+ YRY + N +K V R
Sbjct: 155 -----------ALGYTVGAGVEAMVTNNITTRVEYRYTDYQNKDYNIGGSK-----VSRG 198
Query: 229 GNAHIASLGINMHF 242
+ +GI M F
Sbjct: 199 FDDQSVKVGIGMKF 212
>gi|91975493|ref|YP_568152.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris
BisB5]
gi|91681949|gb|ABE38251.1| Outer membrane autotransporter barrel [Rhodopseudomonas palustris
BisB5]
Length = 645
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 21/205 (10%)
Query: 54 WSGNYVGLHISRLYETHPLADTI-NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G ++G L +T G ++G++ Q +V G+ + A
Sbjct: 437 WTGFFIGGSFGALNGRTDWTFQPVGTRTDPRFAGAIGGGQIGYDHQFGKWVVGVEGNLFA 496
Query: 113 AKDDST-------FYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSS---- 160
+ F+ + G K GY+ D L Y GG + ++
Sbjct: 497 TNANGARPCPNGVFFTCENNVSWMGTATAKLGYAFWDRSLWYVRGGGAFGDLKVTTNCNT 556
Query: 161 ---LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ + + +G G ++ ++ + ++ A Y
Sbjct: 557 GPVVPNPAFLVVAGCGESASRNRAGWTIGFGSEFALSKNWTVRAETNYFDMGRERYTLPT 616
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+ DV+ N I+++G+N F
Sbjct: 617 STIDVKE-----NGFISTVGLNYRF 636
>gi|115522859|ref|YP_779770.1| porin [Rhodopseudomonas palustris BisA53]
gi|115516806|gb|ABJ04790.1| porin [Rhodopseudomonas palustris BisA53]
Length = 275
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 19/183 (10%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL-------------- 122
N + ++ G I L + +++FG+ K + +
Sbjct: 83 NNYSLSNTFIGGGTIGLNYQPSASNWLFGVEGEVGYLKLSRSVVDINPVPAGAPGADSID 142
Query: 123 -KEKYFIYGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+YG + GY+ D +L Y GG F G + V + + G
Sbjct: 143 RTRIGDLYGVFAARLGYAFDRVLFYAKGGAAFVGKEASFTDKCAVAPCSVNTLNTDYSGT 202
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN--AHIASLG 237
+ G GL+Y +N S+ Y Y+ ++NA ++ + H +G
Sbjct: 203 QLTWAAGGGLEYAINDSWSVKGEYLYLATKETYTYSANASNNQPYTVSHTDPGVHTGKIG 262
Query: 238 INM 240
+N
Sbjct: 263 LNY 265
>gi|85714675|ref|ZP_01045662.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
gi|85698560|gb|EAQ36430.1| possible outer membrane protein [Nitrobacter sp. Nb-311A]
Length = 222
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 68/190 (35%), Gaps = 24/190 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
W+G Y+G HI + N+ G+++G++ Q +VFG+ + +
Sbjct: 43 WTGFYLGGHIGGAFGGANNIFAPGVAFNNNDGVFMGGVQVGYDTQFSPNWVFGLEANYSF 102
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
S F G V + GY+ L+Y GG+G A ++
Sbjct: 103 LDTGSFFA-----NRGLGSVTGRLGYTWGPALLYVKGGYGWADSRFTNGFGGN------- 150
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G +G GL+Y+ + S Y+Y ++ + + + H
Sbjct: 151 -----GGRDGYTVGGGLEYLFTQNWSGKVEYQYYDLGTVNLVAPVVA------NFRNDQH 199
Query: 233 IASLGINMHF 242
+G+N F
Sbjct: 200 TIKVGLNYRF 209
>gi|27379810|ref|NP_771339.1| outer-membrane protein [Bradyrhizobium japonicum USDA 110]
gi|27352963|dbj|BAC49964.1| blr4699 [Bradyrhizobium japonicum USDA 110]
Length = 259
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 19/178 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTIN------RKTYNSLLPNGLGIELGHNIQLEDFVFG 105
WSG Y+G++ + ++ +G ++G+ Q ++VFG
Sbjct: 42 YDWSGFYIGINGGGGSAHKCWDFVTPVTGVLIGEGCHNATGGTVGGQVGYRWQSANWVFG 101
Query: 106 INCHTTAAKDDS---------TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ A T R + K +G + GY+ +++L Y GG
Sbjct: 102 LEGQGNWADFSGDNVSTTFIGTGLRDRSKINAFGLFTGQVGYAWNNVLFYVKGGGAVVSD 161
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ + R + +G GL++ + ++ Y +I ++
Sbjct: 162 RYRGYDVITG----LEFDRANETRWGGTVGAGLEFGFAPNWTVGVEYDHIFMGNRTIG 215
>gi|209886818|ref|YP_002290675.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
gi|209875014|gb|ACI94810.1| carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
Length = 660
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 59/229 (25%), Gaps = 41/229 (17%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLP----------------NGLGIEL 93
W+G Y G+H+ + + L G++
Sbjct: 5 ALYDWNGWYAGVHVGAIRGLSNWSAIPPGAGAPGLSGSFDLPFNFDFIGGTGNYVAGLQG 64
Query: 94 GHNIQL-EDFVFGINCHTTAAKDDSTF-----------------YRLKEKYFIYGDVVLK 135
G+N + G + D E YG +
Sbjct: 65 GYNHVFPSRAMLGFESDISFPNSDVQVPFSVRGSQTVSSPLTGQVTYGEAVIHYGSARAR 124
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG----HGSSVVLGIGLDY 191
AGY+ D L+YG GG +Y + + A G G++
Sbjct: 125 AGYAFDHFLLYGTGGLAWSYDQVTRTQVDGVSVGGAATPGTVDTRLLWRLGWAAGAGIEI 184
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + + A Y + + A E + LG+N
Sbjct: 185 PLAANWTAKAEYLATGFGHKGMRFTGAS---EAFNSDLTMQSIRLGLNY 230
>gi|22852215|dbj|BAC16222.1| hypothetical protein [Bartonella henselae]
Length = 265
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 65/251 (25%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 4 IALISASAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 55
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------------- 113
N+K ++ P+G GI G N+ L + + G+ A
Sbjct: 56 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTSSAKVI 114
Query: 114 -------------KDDSTFYRLKE----------------KYFIYGDVVLKAGY-SVDSL 143
++ F + K K G ++ G+ + D +
Sbjct: 115 REDELANFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRI 174
Query: 144 LIYGMGGFGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDIS 198
+ Y GG A V S KV D + FD + LG G+D+ + ++
Sbjct: 175 MPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVL 234
Query: 199 LSASYRYIPHH 209
L A YRY
Sbjct: 235 LRAEYRYSDFG 245
>gi|15420174|gb|AAK97309.1|AF308167_1 Pap31 [Bartonella henselae phage 60457]
Length = 241
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/250 (17%), Positives = 83/250 (33%), Gaps = 65/250 (26%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 1 IALISXSAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------------- 113
N+K ++ P+G GI G N+ L + + G+ A
Sbjct: 53 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAKVI 111
Query: 114 -------------KDDSTFYRLKE----------------KYFIYGDVVLKAGY-SVDSL 143
++ F + K K G ++ G+ + D +
Sbjct: 112 REDELVNFKDSLKNANAVFAKDKTMDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRI 171
Query: 144 LIYGMGGFGGAYV---IDSSLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDIS 198
+ Y GG A V + + K D + FD + LG G+D+ + ++
Sbjct: 172 MPYVAGGVSYAQVQAVSSTKVTKAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVL 231
Query: 199 LSASYRYIPH 208
L A YRY
Sbjct: 232 LRAEYRYSDF 241
>gi|118593217|ref|ZP_01550602.1| outer membrane protein [Stappia aggregata IAM 12614]
gi|118434108|gb|EAV40764.1| outer membrane protein [Stappia aggregata IAM 12614]
Length = 251
Score = 71.8 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 64/205 (31%), Gaps = 22/205 (10%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
Y +W+G Y+G L K ++ + G+ G+N ++ F
Sbjct: 64 TPLYAPTPQSLWAGPYLGFEGGVSQTVTELKSGGRTKDFSRVDA-AFGLFGGYNWEVSRF 122
Query: 103 VFGINCHTTAAKDDS-----TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
V G+ T ++ + + G + +++ Y G
Sbjct: 123 VLGVEGGAAYLGAREKGTHPTLGAIETGSKWTINAKARVGMPIKNVMPYLSLGIA----- 177
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ K + VLG G++ V L A Y + + +
Sbjct: 178 ------ATEHSLKANGTERNSVSVGPVLGGGVEVAVMDAWHLRADY-----SLTGILDET 226
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
A+ +VD+ H +G++ F
Sbjct: 227 ARFGGTKVDQTAGNHRLMIGLSRSF 251
>gi|27381635|ref|NP_773164.1| hypothetical protein bll6524 [Bradyrhizobium japonicum USDA 110]
gi|27354803|dbj|BAC51789.1| bll6524 [Bradyrhizobium japonicum USDA 110]
Length = 271
Score = 71.8 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 19/204 (9%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG----LGIELGHNIQLEDFVFGINCH 109
WSG Y+G + + T + G ++G+ Q FV G+
Sbjct: 61 WSGFYIGANGGWGQSHGCVDFVTPAGTVAGGCADRSGGLAGGQIGYRWQTNQFVLGLEAQ 120
Query: 110 TTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
A+ +T L K G + G++ ++ L Y GG +
Sbjct: 121 GDWAEIKNTRVSLIDPLISTTGKTDAIGLFTAQLGWAWNASLFYVKGGAAVT----RNRF 176
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN----NSNA 218
+ ++ + LG+G +Y + S Y ++ + +
Sbjct: 177 DIFNNVTGVGLASAGHTRWGGALGVGWEYGFAPNWSAGIEYDHLWMGRDNFGFAGVVTPG 236
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ + + +L +N F
Sbjct: 237 GLTLTGSGISQDVDMVTLRLNYRF 260
>gi|218508536|ref|ZP_03506414.1| outer membrane protein [Rhizobium etli Brasil 5]
Length = 144
Score = 71.4 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 8/126 (6%)
Query: 34 IDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIEL 93
+D EA + G W G Y+G + +
Sbjct: 27 VDQVPEAPVAQDAPVKPAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFT 78
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
G+N Q V+G+ + DD + +K KY G V + GY ++ L+YG G
Sbjct: 79 GYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYDMNPFLLYGTAGLAL 138
Query: 154 AYVIDS 159
+ S
Sbjct: 139 GNIKVS 144
>gi|49475276|ref|YP_033317.1| hemin binding protein d [Bartonella henselae str. Houston-1]
gi|49238082|emb|CAF27289.1| Hemin binding protein d [Bartonella henselae str. Houston-1]
Length = 274
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 75/244 (30%), Gaps = 58/244 (23%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYN----------SLLPNGLGIELGHNIQL 99
W+G Y+G + L+ + KT L GI G N +
Sbjct: 38 PAFSWAGFYLGGQVGNFSSKTALSYLGDEKTGKWTPVKKEFVPKLSGFVGGIYAGSNFDI 97
Query: 100 ED-FVFGINCHT-----------------------------TAAKDDSTFYRLKE----- 124
+ F+ GI+ + + T +
Sbjct: 98 NNGFIIGIDTDVMWSGKKNTKIITWPEVPPEVSSEKKVERVSVGTNQDTSAEVTNGALSH 157
Query: 125 --KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD----NSKNAKGRFDG 178
K +G +K G+ VD ++ Y GG + + ++ + + N
Sbjct: 158 TLKQKWFGATRVKVGFVVDRMMPYIAGGVAYTQLQNIFEKEADKTKKAIDISNVIHDEKK 217
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
LG G+D+ + ++ + A YRY + + E+++ + + +G+
Sbjct: 218 TMVGYTLGGGIDFAMTDNVIVRAEYRYSDYGKKKFAD-------EKIEMRYKTNDFRVGV 270
Query: 239 NMHF 242
F
Sbjct: 271 AYKF 274
>gi|296447975|ref|ZP_06889882.1| porin [Methylosinus trichosporium OB3b]
gi|296254542|gb|EFH01662.1| porin [Methylosinus trichosporium OB3b]
Length = 308
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 68/258 (26%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTIN-------------------RKTYNSLLPNGLGIE 92
W+G Y+G + ++ D+ +L G +
Sbjct: 37 FSWTGAYLGANGGYIWGARNGVDSYGVAVIDKDPLFGATSALGVGNVAAPNLNGAFGGGQ 96
Query: 93 LGHNIQLED-FVFGINCHTTAAKDDSTFYRLK-------------------EKYFIYGDV 132
G+N Q+ FV G+ + R + V
Sbjct: 97 AGYNYQVSPRFVIGVEGDVQGTAVQGSEGRYRLLTVPNLPRYSIGTQTQVDRNIDYLATV 156
Query: 133 VLKAGYSV-DSLLIYGMGGFGGA-------------YVIDSSLEKVESDNSKNAKGRFDG 178
+ G++V L+Y GG + ++ +SD A +F
Sbjct: 157 RGRVGFAVLPDALLYLTGGLAFGRVSQRVTQTQSVYWAGSTNFP-ADSDGFGFAASQFAQ 215
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAKSDVE-------------R 224
G G+++ + S Y Y + S ++
Sbjct: 216 TRVGWAAGGGVEWAFRGNWSAKLEYLYYDLGGVRSSGALAFDTNAAPGPGSGGVGLVAVE 275
Query: 225 VDRKGNAHIASLGINMHF 242
+ N H+ G+N
Sbjct: 276 SRSRFNGHVLRAGLNYRL 293
>gi|114798934|ref|YP_759743.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444]
gi|114739108|gb|ABI77233.1| putative outer membrane protein [Hyphomonas neptunium ATCC 15444]
Length = 292
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 64/225 (28%), Gaps = 34/225 (15%)
Query: 30 LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLL-PNG 88
P D E ++ + G + E PLA + +S
Sbjct: 44 GPTWQDRSAERGLVTGSVAPDFDYDANLNEGGPSGGVAEGSPLAAIFPSEFGSSEKVGMS 103
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAK----DDSTFYRLKEKYFIYGDV------------ 132
G++ G+N Q F G T DD L +GD
Sbjct: 104 GGVQAGYNQQYGRFALGFEADFTGLGSNGGDDGAVQGLTASNPAFGDAVFGTDLRVRSSM 163
Query: 133 ------VLKAGYSVDSLLIYGMGG-----------FGGAYVIDSSLEKVESDNSKNAKGR 175
L+AG D L+YG GG F D S + GR
Sbjct: 164 DYLATTRLRAGVVTDRFLVYGTGGAAVGNPEHQVDFSAGLTATGGTLVGPLDRSNSFSGR 223
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
D G G ++ +++L A Y Y V ++ +
Sbjct: 224 KDDWKGGWTAGAGGEFAFTDNMTLKAEYLYYDLGETHVGATSTSA 268
>gi|188580104|ref|YP_001923549.1| porin [Methylobacterium populi BJ001]
gi|179343602|gb|ACB79014.1| porin [Methylobacterium populi BJ001]
Length = 254
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 63/211 (29%), Gaps = 26/211 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED---FVF 104
W+G YVG + + + G ++G+N Q+ +V
Sbjct: 50 FTWTGFYVGANAGYGFRGGSSRYSDATYGTVTESGGKGGFVGGGQIGYNYQITPGSGWVL 109
Query: 105 GINCHTTAAK---------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
G A + +Y + YG + + GY+ D L+YG GGF
Sbjct: 110 GAEADLQATGFGRRGDGTVGATPYYGVAPSLDWYGTLRGRVGYAFDRWLVYGTGGFAYGG 169
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
S S D G G++Y + +S+ Y+
Sbjct: 170 GSRSPY------ASAYPYTLPDTTRLGYAAGAGIEYALTDHVSVKVEGLYVDLGKQGTGT 223
Query: 216 SNAKSDVERVDRKGN----AHIASLGINMHF 242
+ + V G + G+N F
Sbjct: 224 TVYDATVPAYYGTGRSESGFGVVRGGLNYRF 254
>gi|27379812|ref|NP_771341.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA
110]
gi|27352965|dbj|BAC49966.1| blr4701 [Bradyrhizobium japonicum USDA 110]
Length = 250
Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 23/206 (11%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLEDFVFG 105
WSG Y+G + + T + G +G ++G+ Q +VFG
Sbjct: 43 WSGFYIGGNAGGGSSHNCWDLTAVGVAAIPVTAEGCHNATGALVGGQIGYRWQSSSWVFG 102
Query: 106 INCHTTAAKDDSTFYRL---------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
+ A + K G + GY+ +++L Y GG +
Sbjct: 103 LEAQGDWADLKGSNVSAPAALFPLVNNTKIDAIGLFTGQVGYAWNNVLWYVKGGAAVTHN 162
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S + ++ N +G G+++ + S++ Y ++ H+ +
Sbjct: 163 KFSGTLAGITLDTANETR------WGGTVGTGIEFGFAPNWSVAVEYNHLFMGKHTDTFT 216
Query: 217 NAKSDVERVDRKGNAHIASLGINMHF 242
K + + ++ +N F
Sbjct: 217 FLGVATRSDSIKQDVDMGTVRLNYTF 242
>gi|218461155|ref|ZP_03501246.1| outer membrane protein [Rhizobium etli Kim 5]
Length = 168
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 8/110 (7%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W G Y+G + + G+N Q V+G+
Sbjct: 43 PAGNWEGFYLGGAGTYNMGDFGSDRHTYGFGGQ--------VFTGYNWQAGQIVYGVESD 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
+ DD + ++ KY G V + GY ++ L+YG G + S
Sbjct: 95 LGYSGDDVSSGGVENKYGWNGSVRGRVGYDMNPFLLYGTAGLALGNIKVS 144
>gi|148257935|ref|YP_001242520.1| hypothetical protein BBta_6718 [Bradyrhizobium sp. BTAi1]
gi|146410108|gb|ABQ38614.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 550
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 15/186 (8%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN-----CHTTAAKDDSTFY 120
L T N G G++LG + Q++ FV GI A+ +
Sbjct: 363 PLPQAALLQTPANVASNGGDVIG-GVQLGCDYQIDRFVLGIQAMADLGIINASTAVAPQL 421
Query: 121 RLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
L + ++AGY V +L+Y GG +++ ++ A R
Sbjct: 422 TLNARTSNLYTATVRAGYLVTPEVLLYARGGAAWTRTSVTAVNAANGQSASAAFNR---- 477
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER---VDRKGNAHIASL 236
S +G G+++M + S A Y Y + A + V H A +
Sbjct: 478 -SGWTVGAGVEWMFARNWSAFAEYDYADFGTVTGRLPGAAAVTGGPDVVSLNTKIHTALV 536
Query: 237 GINMHF 242
G+N F
Sbjct: 537 GVNYRF 542
>gi|46205164|ref|ZP_00048920.2| COG3637: Opacity protein and related surface antigens
[Magnetospirillum magnetotacticum MS-1]
Length = 313
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 19/126 (15%)
Query: 103 VFGINCHTTAAK----------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
++G+ + D F ++EK ++G + GY+ + LIY
Sbjct: 1 MYGLEADLAGSNLKRGVRSDVQGFGYEAIDPPFALIREKTDLFGSARARLGYAFGNNLIY 60
Query: 147 GMGGFGGAYV-IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
G GA + ++ + + A LG G+ + V+ +SL YRY
Sbjct: 61 ATLGLSGANGRVLATYPDLAGGATATAARDVSY--LGFTLGAGVQFAVDPHLSLGLDYRY 118
Query: 206 IPHHIH 211
Sbjct: 119 SDLGES 124
>gi|15420180|gb|AAK97312.1|AF308170_1 Pap31 [Bartonella henselae phage 60457]
Length = 240
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 82/249 (32%), Gaps = 65/249 (26%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 1 IALISASAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHTTAA------------- 113
N+K ++ P+G GI G N+ L + + G+ A
Sbjct: 53 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMSLGNNMILGVETDAVWADREDAKTSSAKVI 111
Query: 114 -------------KDDSTFYRLKEKYF----------------IYGDVVLKAGY-SVDSL 143
++ F + K G ++ G+ + D +
Sbjct: 112 REDELANFKDSLKNANAVFAKDKTSDDVKQDEKHTDSLALKEKWSGATRVRIGFTAADRI 171
Query: 144 LIYGMGGFGGAYVIDSSLEKVE---SDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDIS 198
+ Y GG A V S KV D + FD + LG G+D+ + ++
Sbjct: 172 MPYVAGGVSYAQVQAVSSTKVTQAADDAEIASAQLFDKTKTLVGFTLGGGVDFAMTDNVL 231
Query: 199 LSASYRYIP 207
L A YRY
Sbjct: 232 LRAEYRYSD 240
>gi|83308666|emb|CAJ01574.1| outer membrane protein [uncultured bacterium]
Length = 304
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 71/255 (27%), Gaps = 66/255 (25%)
Query: 54 WSGNYVGLHISRLYET-----HPLADTINRKTYNSLLPNGL------------------- 89
W+G YVG + + D + G+
Sbjct: 39 WTGLYVGFNAGGTWSNSTTIHTTTEDIVGNPGVVGGPAFGVASADLATGSISPVNHSGFI 98
Query: 90 -GIELGHNIQLED----FVFGINCHTTAAKDDSTFYRL--------------------KE 124
G ++G+N Q + +V GI ++ + +
Sbjct: 99 GGGQVGYNYQFNNSWSSWVAGIEADIQGVAASNSAHLVFGQAFVPGFAGSPIDQNLSSSM 158
Query: 125 KYFIYGDVVLKAGYSVDSLLI-YGMGGFGGAYVIDSSLEKVESDNSK------NAKGRFD 177
G V + G+++ L+ YG GG + +N ++ G
Sbjct: 159 TGDFLGTVRGRLGFTIIPTLLFYGTGGLAYGQTDSRTSITQIVENDPALPNHYSSFGSIS 218
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRY-----IPHHIHSVNNSNAKSDVER-----VDR 227
G G +++ + S+ Y Y + + + + N N +
Sbjct: 219 NSRVGWTAGGGGEWLFAPNWSVKVEYLYYNLGSVSYGLTPLQNFNTAGTLFTDGAPFSRA 278
Query: 228 KGNAHIASLGINMHF 242
+I G+N HF
Sbjct: 279 SFRGNIVRAGLNYHF 293
>gi|218517219|ref|ZP_03514059.1| outer membrane protein [Rhizobium etli 8C-3]
Length = 153
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 51/166 (30%), Gaps = 19/166 (11%)
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G+N Q ++ V GI + ++ G V +
Sbjct: 7 GASASEDFNGGVFGGFAGYNFQFDNIVVGIEGNLEYNWNEEEALGADVGTDWAGAVRGRV 66
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
GY+ D LIYG G+ + + +G G+D+ + +
Sbjct: 67 GYAFDKALIYGAAGWAATRGYV----------DAPGFDKETETFNGYTVGAGVDFAITNN 116
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I YRY + D+ VD + H GI + F
Sbjct: 117 IFARGEYRYNDYGER---------DILGVDVDLDQHELKFGIGVKF 153
>gi|170749780|ref|YP_001756040.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656302|gb|ACB25357.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 299
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/235 (18%), Positives = 75/235 (31%), Gaps = 55/235 (23%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED---FVFGINCH- 109
GN V L L L + Y++ G G ++G+N QL V G
Sbjct: 69 GNPVALVPGGLVPYQALLPNGSSLIYSNDSREGFSGGGQIGYNWQLTPGSGAVIGFEADA 128
Query: 110 ------------TTAAKDDSTFYRLK---EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
T AA + F + +G V + GY+ D L+Y GGF A
Sbjct: 129 QYLDFGRRARFATNAAAINPGFIPVNGTLNTIDFFGTVRGRLGYAFDRTLVYATGGFAYA 188
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYR 204
+ + +N GR + + +G G++Y + + ++L
Sbjct: 189 ----TGTDDGARVGLQNFAGRRNDFKTGWTVGGGVEYALPTDSFLNFFRSSAVTLKVEGL 244
Query: 205 YIPHHIHSVNNSNAKSDVERV-----------------DRKGNAHIASLGINMHF 242
Y+ NN A++ + + + G+N F
Sbjct: 245 YVNL---DNNNGRAQAPLVGAAISPVGLVPVYSLAGASRNENAFAVVRAGLNYKF 296
>gi|319783284|ref|YP_004142760.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169172|gb|ADV12710.1| OmpA-like transmembrane domain-containing protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 217
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 19/209 (9%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHISRLYETHP-LADTINRKTYNSLLPNGLGIELGHNIQL 99
D + D W G Y G+ + E + +++ +G G+N+Q
Sbjct: 21 DMTIAPVDTPEWTWQGPYAGVFGAGTLEHYKIYGPGAQAGATHNVGSATVGGFAGYNLQS 80
Query: 100 EDFVFGINCHTTAAKDDSTF------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
V+G+ +TF L ++G V + G + + + + G
Sbjct: 81 GKIVYGVEGELGYRFKKNTFDDIPGPGVLDASTGLFGSVKGRVGMDMGAYMPFVTAGVTA 140
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
A + + ++ D V+G G+D + +++ L Y + S+
Sbjct: 141 AKLK-TFYPGGNAER--------DATLVGGVVGAGIDVALTHNVFLRGEYDFSFFGKKSL 191
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+E + + +GI M F
Sbjct: 192 EYCGGGCTLEHTLQTHDF---RVGIAMKF 217
>gi|254470977|ref|ZP_05084380.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062]
gi|211960119|gb|EEA95316.1| outer membrane protein, hypothetical [Pseudovibrio sp. JE062]
Length = 228
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 21/197 (10%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
W G Y+G+ + + +G+ G+N ++ + G+
Sbjct: 50 PPEYDWDGFYLGVQGGWARLH---GTNRFNNSGSQYNGGTVGLYGGYNYTYQNILIGVEG 106
Query: 109 HTTAAK-DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + + + ++AG + D + Y GG + S+
Sbjct: 107 EGAYWAFGERSRGEMSLRSDYFAAAKIRAGLTYDWFMAYVTGGAAVSTFRASNPNF---- 162
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR--YIPHHIHSVNNSNAKSDVERV 225
G V G GL+ V I + Y P +V + K D+
Sbjct: 163 ----GPGTDSNTMLGWVGGAGLEMFVTERIIVRLDYERIVFPGRSFTVGGTRFKEDI--- 215
Query: 226 DRKGNAHIASLGINMHF 242
++ LG++ F
Sbjct: 216 ----DSDAIRLGVSYKF 228
>gi|7514148|pir||JC6528 31K major protein, Pap31 - Bartonella henselae phage
Length = 281
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 90/293 (30%), Gaps = 74/293 (25%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSG--NYVGLHISR 65
+L ++++ + + A D+ +P ++ W+G Y+G +
Sbjct: 5 SLMTTSVIALISASAAQAADVIVPHEV--------APTVISAPAFSWTGTGFYIGGQVGN 56
Query: 66 LYETHPLADTINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHT------- 110
+ D N+K ++ P+G GI G N+ L + + G+
Sbjct: 57 FSSKVEITD-PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADRED 115
Query: 111 -----------------------------------TAAKDDSTFYRLKEKYFIYGDVVLK 135
A D L K G ++
Sbjct: 116 AKTSSAEAIGQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVR 175
Query: 136 AGY-SVDSLLIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGL 189
G+ + D ++ Y GG A V S KV +++ + LG G+
Sbjct: 176 IGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGV 235
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D+ + ++ L A YRY K + E + + +G+ F
Sbjct: 236 DFAMTDNVLLRAEYRYSDFGKK-------KFEKEGSEFSYKTNDFRVGVAYKF 281
>gi|218532663|ref|YP_002423479.1| porin [Methylobacterium chloromethanicum CM4]
gi|218524966|gb|ACK85551.1| porin [Methylobacterium chloromethanicum CM4]
Length = 243
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/211 (17%), Positives = 64/211 (30%), Gaps = 26/211 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED---FVF 104
W+G YVG + + + T G ++G+N QL +V
Sbjct: 39 FTWTGFYVGANAGYGFRGSSSSYTDATYGTVIESGGKGGFVGGGQIGYNYQLTSGSGWVL 98
Query: 105 GINCH---------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
G + ++ + +G V + GY+ D L+YG GGF
Sbjct: 99 GAEADFQGMTFGRRGDGTIGTTPYHGVAPSLDWFGTVRGRLGYAFDRWLVYGTGGFAYGG 158
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
S + D +G G++Y + IS+ Y+
Sbjct: 159 GSASPY------ATSYPYTLPDTTRLGYAVGGGVEYALTEHISVKVEGLYVDLGKRGSGT 212
Query: 216 SNAKSDVERVDRKGN----AHIASLGINMHF 242
+ + V G + G+N F
Sbjct: 213 TVYDTSVPAYYGTGRSESGFGLVRGGLNYRF 243
>gi|300025034|ref|YP_003757645.1| porin [Hyphomicrobium denitrificans ATCC 51888]
gi|299526855|gb|ADJ25324.1| porin [Hyphomicrobium denitrificans ATCC 51888]
Length = 231
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 25/207 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
W+G Y GL + + +D N G G + V GI
Sbjct: 34 FDWTGAYAGLQAGYSWSSARYSDDTYLSEANPEGFIGGGYIGYNYQLPSRLVLGIEADIV 93
Query: 112 AAKDDST--------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
+ D + L+ + V + GY+ L Y GG
Sbjct: 94 GSGMDGSDGQRYLDDPSVSIAGVELEMETRWSAAVRGRIGYAYGRYLPYIAGGVSFTDYE 153
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
++ V + + + +G G++Y N + + A YRY +
Sbjct: 154 FRWIDHVN----ATVPFKREQSRTGWNIGTGVEYAANDWVIVRAEYRYTDF-----GTDH 204
Query: 218 AKSDVER--VDRKGNAHIASLGINMHF 242
+D + H LG+ + F
Sbjct: 205 FPNDFAGPYSKMELQTHDLRLGVGVKF 231
>gi|222149200|ref|YP_002550157.1| outer membrane protein [Agrobacterium vitis S4]
gi|221736185|gb|ACM37148.1| outer membrane protein [Agrobacterium vitis S4]
Length = 212
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 22/195 (11%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGIN 107
W+G Y+G++ + ++ +G G N + + + G+
Sbjct: 39 PAAFSWAGGYIGVYGGYGWL-DATLSQGGASLSDNFDGGRIGGFGGWNFDVGHNVILGVE 97
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+++ + +K + G +AGY++D LI+ GG+ +
Sbjct: 98 ADVNYDWNENNYSGVKVGMDVSGSARARAGYAIDRALIFVAGGWT-----------ADRT 146
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
K++ G F+ + +G G+DY + I YRY + ++ +D
Sbjct: 147 YIKSSSGDFNKTLNGWTIGAGVDYAITNRIFTRLEYRYNDY---------GTKNISGIDF 197
Query: 228 KGNAHIASLGINMHF 242
++ +LGI + F
Sbjct: 198 DSKQNVVNLGIGIKF 212
>gi|90424260|ref|YP_532630.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisB18]
gi|90106274|gb|ABD88311.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisB18]
Length = 251
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 58/183 (31%), Gaps = 17/183 (9%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPL------ADTINRKTYNSLLPNGLGIELGHNIQLED 101
YG WSG Y+G + ++ + + G ++G+ Q +
Sbjct: 34 APVYG-WSGFYLGGNGGWGSSRKCWDFVNAAGSFLSSEGCHDATGGTAGGQVGYRWQAAN 92
Query: 102 FVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
VFG+ A + + + K +G + G + + L+Y G
Sbjct: 93 MVFGVEAQGNWADFNGSNISVAFPTVVNATKVDSFGLFTGQIGNAWGNTLVYLKAG---G 149
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
V + N V+G+G++Y S+ Y ++ +
Sbjct: 150 AVTSDRYTGYLTSNGVQISDAVKDTRWGAVVGLGVEYGFGGAWSVGVEYDHMFMQDKLIR 209
Query: 215 NSN 217
+N
Sbjct: 210 FTN 212
>gi|170748188|ref|YP_001754448.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
gi|170654710|gb|ACB23765.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
Length = 571
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/253 (15%), Positives = 70/253 (27%), Gaps = 49/253 (19%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA---------------DTI 76
W+G + GL I
Sbjct: 18 AMAADLPRRALPPAATAVPIFSWTGAHAGLFAGYGTLDRATQFVCTGPDGQPGARNCPVI 77
Query: 77 NRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK-------------DDSTFYRL 122
K + G G E+G++ Q+ FV G + FYR
Sbjct: 78 PSKRASDGSFVG-GAEVGYDWQVNSGFVAGAAADYQFTRLWGYDRREGAFPAAGGGFYRR 136
Query: 123 K-----EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
++ + + G++VD L+Y GG V + +++ S FD
Sbjct: 137 SVAHSGQRLDELATLRGRIGFAVDRTLVYATGGLAAGTV------RTDNNLSLAGFPLFD 190
Query: 178 ----GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RVDRKG 229
V G G+++ + +S Y +V + + +
Sbjct: 191 RRQGAVRLGYVAGAGIEHAFSEHLSAKVEGLYYDLGSRAVLPAPSYPVLTGYHAGTRVAT 250
Query: 230 NAHIASLGINMHF 242
+ +A +G+N F
Sbjct: 251 DGFLARVGLNYRF 263
>gi|209885358|ref|YP_002289215.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans
OM5]
gi|209873554|gb|ACI93350.1| outer-membrane immunogenic protein [Oligotropha carboxidovorans
OM5]
Length = 173
Score = 69.1 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 27/167 (16%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADT-----INRKTYNSLLPNGLGIELGHNIQLED-FV 103
W+G Y+G + ++ + T + +S L G+ LG N Q +V
Sbjct: 21 PIYNWTGLYIGAQVGGAFQGNSGFVTDNPLVTGNRDDSSFLGGGV---LGANYQFSPNWV 77
Query: 104 FGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
GI ++ F ++ K V + GY+ +IY GG
Sbjct: 78 LGIEGEFNGLSNNRYTFTDGFDGIRVKNDWLASVTGRLGYTWGPGMIYPKGGVAF----- 132
Query: 159 SSLEKVESDNSKNAKGRF--DGHGSSVVLGIGLDYMVNYDISLSASY 203
+ A F S +G GL+YM S Y
Sbjct: 133 ------RDNGGIAATTPFLVSRDTSGYTVGAGLEYMFAPAWSAKIEY 173
>gi|170750581|ref|YP_001756841.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657103|gb|ACB26158.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 277
Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 79/280 (28%), Gaps = 61/280 (21%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY-------- 67
++ + DL A + W+G Y G++ +
Sbjct: 3 KLLASLAAFTALTGAASAADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASDRNTG 62
Query: 68 ------ETHPLADTINRKTYNSLLPNGLGIELGHNIQLED---FVFGINCHTT------- 111
+ T+ S G ++G+N Q+ V G+
Sbjct: 63 NTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLDFGRN 122
Query: 112 -----AAKDDSTFYRLK-----EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
+ + Y L +G V + GY+ D L+YG GGF
Sbjct: 123 RNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSG----- 177
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIH 211
+D S D + +G G++Y + + ++L Y+ +
Sbjct: 178 ---SADRSFGGYAGNDSFRTGWAVGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRN 234
Query: 212 SVN--------NSNAKSDVERV-DRKGNAHIASLGINMHF 242
+ N +N + R + G+N F
Sbjct: 235 TRNQGAFVINAANNFPVVYSGIGRRSDEFAVVRAGLNYKF 274
>gi|148253080|ref|YP_001237665.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146405253|gb|ABQ33759.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 258
Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 20/208 (9%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTIN---------RKTYNSLLPNGLGIELGHNIQL 99
+ WSG YVG+++ D + + +S G + G+ Q
Sbjct: 38 EPNYDWSGFYVGVNVGGGKAHACWDDAFSFGVLNSPAISEGCHSTSGAIAGGQAGYRWQS 97
Query: 100 EDFVFGINCHTTAAKDDSTFYRL-------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
V G+ A + + G +AG + ++L Y GG
Sbjct: 98 AFAVLGVEAQGDWANLRGSNISQLDPTLTNRTITDAIGLFTGQAGAAWQNVLWYIKGG-- 155
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
A + + + + + S R G +G G++ + S+ Y ++ S
Sbjct: 156 -AAITNDKYDGLITGTSV-LNDRASGTRWGGTIGTGIEIGFAPNWSVGIEYDHLFIPSRS 213
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINM 240
++ ++ + V + + G++M
Sbjct: 214 ISFTSLNAAVAPIGMQTRVDNVREGVDM 241
>gi|115524901|ref|YP_781812.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisA53]
gi|115518848|gb|ABJ06832.1| putative outer-membrane protein precursor [Rhodopseudomonas
palustris BisA53]
Length = 250
Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 62/208 (29%), Gaps = 17/208 (8%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE------THPLADTI 76
LA + + A + WSG Y+G + +
Sbjct: 8 GLAAVVMVGSASAADVAAAPYAKAVSAPVYDWSGFYLGGNGGWGSSRKCWDFVDAAGSFL 67
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL-------KEKYFIY 129
+ + G +LG+ Q + VFG+ A + + + K +
Sbjct: 68 TSEGCHDASGGTAGGQLGYRWQASNLVFGVEAQGNWADFNGSNVSIAFPTVVNATKVDSF 127
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G + G + + L+Y G V + N + V+G+G+
Sbjct: 128 GTFTGQIGNAWGNTLVYLKAG---GAVTSDRYTGYLTSNGVQISDTVKDNRWGAVVGLGV 184
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSN 217
+Y SL Y ++ + +N
Sbjct: 185 EYGF-GAWSLGVEYNHMFMQDRLIRFTN 211
>gi|15420176|gb|AAK97310.1|AF308168_1 Pap31 [Bartonella henselae phage 60457]
Length = 245
Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 65/247 (26%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 7 IALISASAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 58
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHT---------------- 110
N+K ++ P+G GI G N+ L + + G+
Sbjct: 59 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAEAI 117
Query: 111 --------------------------TAAKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSL 143
A D L K G ++ G+ + D +
Sbjct: 118 GQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAADRI 177
Query: 144 LIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ Y GG A V S KV +++ + LG G+D+ + ++
Sbjct: 178 MPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDFAMTDNVL 237
Query: 199 LSASYRY 205
L A YRY
Sbjct: 238 LRAEYRY 244
>gi|323139417|ref|ZP_08074467.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
gi|322395349|gb|EFX97900.1| putative outer-membrane immunogenic protein precursor
[Methylocystis sp. ATCC 49242]
Length = 304
Score = 68.7 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 76/297 (25%), Gaps = 74/297 (24%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYET- 69
F + + + A D F ++ +W+G +VGL+ +++
Sbjct: 6 FALTALTLAAGSAFAAD---------FPSRESPPPAYIPPPLVWTGFHVGLNAGGTWDSS 56
Query: 70 ----HPLADTINRKTY-------------------NSLLPNGLGIELGHNIQLE-DFVFG 105
A + + G ++G+ Q + V G
Sbjct: 57 QNVSIASAPLFQGGAFGPAPWSAAAALGATGVLGASGNGGFIGGGQIGYTWQFHRNIVAG 116
Query: 106 INCHTTAAKDDSTFYRLKEKYFI----------------------YGDVVLKAGYSVD-S 142
+ L + G V + GY +
Sbjct: 117 VEADIQGIASGVGGGSLTTTVPVMLPAAPFPSANTVMSASRSLDYLGTVRGRIGYLFSPT 176
Query: 143 LLIYGMGGFGGA-----YVIDSSLEKVESDNSKNAKGR--FDGHGSSVVLGIGLDYMVNY 195
LL+YG GG S G F G GL++M
Sbjct: 177 LLLYGTGGLAYGGVSLNVTGLQSFTLGTPGFITTGFGGSSFSDTRVGWSAGGGLEWMFWP 236
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDV----------ERVDRKGNAHIASLGINMHF 242
+ S A Y Y N + + + + + H+ G+N HF
Sbjct: 237 NWSAKAEYLYYDLGSVRTNAGLTTTVLATGALVWANGTQAQARFDGHVVRAGVNYHF 293
>gi|90419518|ref|ZP_01227428.1| possible outer membrane protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336455|gb|EAS50196.1| possible outer membrane protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 273
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 69/240 (28%), Gaps = 30/240 (12%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEA-DNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA 73
LSI+ + +L Y ++ E W+G Y+G+ +
Sbjct: 6 LSILTASTALTFASYAQAADVIYEEPMAPAPMEISPVASGWTGIYLGVQGGGAFNPQDPD 65
Query: 74 DTINRKTYNSLLPNGL------------------GIELGHNIQLEDFVFGINCHTTAAK- 114
+ R + + + G +G++ Q++ VFG+ A
Sbjct: 66 NVDLRTNGFAFGGSAVQTAFGSNFDSNVDSSFLGGAHIGYDYQMDSVVFGVLADINAIDL 125
Query: 115 --------DDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVE 165
+ +YR + G V + GY V L Y GG V S
Sbjct: 126 TRSSNADSNAPAYYRTDRELNYLGTVRARVGYLVTPDALAYVTGGLAYGDVDYSFSTNSP 185
Query: 166 SDNSKN-AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ A D +G G++ ++S A Y Y N
Sbjct: 186 AVTGATPAVVSEDEDSFGYTVGGGMEVKFTDNMSFGAEYLYTNLGGSGYTRLNGGPAFSG 245
>gi|329851836|ref|ZP_08266517.1| membrane protein [Asticcacaulis biprosthecum C19]
gi|328839685|gb|EGF89258.1| membrane protein [Asticcacaulis biprosthecum C19]
Length = 278
Score = 68.7 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 16/178 (8%)
Query: 47 QDDEYGIWSGNYVGLHISRL--YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
D YG + G + T G+G+ G++ Q+ ++VF
Sbjct: 55 LDGAYGDTVNTFAGANAFSPGFCTGAANGRTPGEGCAKQREEAGIGLRAGYDWQVGNWVF 114
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIY---------GDVVLKAGYSVDSLLIYGMGGFGGAY 155
G+ T A + + Y + KAGY + +Y G+ A
Sbjct: 115 GVVGEVTNANFEDSVTAFSTTPANYVFTRDIENINALRGKAGYVMGDWQVYLTAGYAQAD 174
Query: 156 VIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ + + N+ N+ DG +G+G++ ++ Y
Sbjct: 175 IERTFR----TSNALNSFTATDGDDSDGYQVGLGIEQRISGRWIGGIEYLRTSLKDEP 228
>gi|170738855|ref|YP_001767510.1| porin [Methylobacterium sp. 4-46]
gi|168193129|gb|ACA15076.1| porin [Methylobacterium sp. 4-46]
Length = 279
Score = 68.3 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 73/281 (25%), Gaps = 67/281 (23%)
Query: 19 VPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPL------ 72
+ + LA+ + P + W+G VG ++ + T
Sbjct: 6 LSSALLAIAVAGPACAADLPRRVQPPSFTPVPVFTWTGFSVGGNVGYAFTTRESRNRNAA 65
Query: 73 --------ADTINRKTYNSLLPNGL--GIELGHNIQLED---FVFGINCHTTAAKDDSTF 119
+++ NG G+++G N Q+ V G+
Sbjct: 66 FLIDDRAIGTVGGTFGFSNRGQNGFTGGLQVGANYQMTPGSGVVVGVEADAQYLDAGRRR 125
Query: 120 Y-------------------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
R +G + GY+ D L+Y GGF
Sbjct: 126 SGVLAGPNTVLNPNAIFFDPRATAGLEYFGTARGRLGYAFDRTLVYATGGFAYGGGSARR 185
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHI 210
+ + +G G++Y + ++L Y+
Sbjct: 186 FFGATDNAQMR---------TGWTVG-GVEYALGRDSFLNVFGASAVTLKLEGLYVNLAR 235
Query: 211 H------SVNNSNAKSDVE---RVDRKGNAHIASLGINMHF 242
+ +VN + R + + G+N F
Sbjct: 236 NGGASLLAVNTGTGDVFLRTPGRRALGDDFMVLRSGLNYTF 276
>gi|15420170|gb|AAK97307.1|AF308165_1 Pap31 [Bartonella henselae phage 60457]
Length = 243
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 65/247 (26%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 5 IALISASAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 56
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLED-FVFGINCHT---------------- 110
N+K ++ P+G GI G N+ L + + G+
Sbjct: 57 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDAKTSSAEAI 115
Query: 111 --------------------------TAAKDDSTFYRLKEKYFIYGDVVLKAGY-SVDSL 143
A D L K G ++ G+ + D +
Sbjct: 116 GQDELETFRDSLKKANAAFAQGKTSDNVAAVDKHTDSLALKEKWSGATRVRIGFTAADRI 175
Query: 144 LIYGMGGFGGAYVIDSSLEKV-----ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ Y GG A V S KV +++ + LG G+D+ + ++
Sbjct: 176 MPYVAGGVSYAQVQAVSSTKVTQAADDAEIATAQLFDKTKTLVGFTLGGGVDFAMTDNVL 235
Query: 199 LSASYRY 205
L A YRY
Sbjct: 236 LRAEYRY 242
>gi|148255737|ref|YP_001240322.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
gi|146407910|gb|ABQ36416.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
Length = 251
Score = 68.3 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 19/180 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLEDFV 103
WSG Y+G + + + + G G ++G+ Q +V
Sbjct: 40 YDWSGFYLGFNAGGGSARTCWTNQVTIAGVAATNAEGCHDATGALAGGQVGYRWQTGGWV 99
Query: 104 FGINCHTTAAKDD-------STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
FG+ A + + K G + + GY+ +++L Y GG
Sbjct: 100 FGVEGQGNWANLKGRNASQLAPGVTNQTKINGVGLLTGQIGYAWNNVLWYVKGGAAVTGE 159
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S L A G +G G++ + S++A Y ++ ++ S
Sbjct: 160 KYSGLATATGTPFDQASATRWGAA----VGTGVEVGFANNWSIAAEYEHLFMGNRTLTFS 215
>gi|319405139|emb|CBI78745.1| Hemin binding protein d [Bartonella sp. AR 15-3]
Length = 262
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 85/278 (30%), Gaps = 52/278 (18%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
MN F VF+ + + A D+ P + + W+G Y G
Sbjct: 1 MNVRNLMMAFIWVFIPVSIV---QAADIMKPHQSQSYQPV---PLIASSSSFSWTGFYFG 54
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGL-----GIELGHNIQLE-DFVFGINCHTTAAK 114
I L D + + LL L G+ G N+ L D + GI+ +
Sbjct: 55 GQIGGFSGEATLKDKNDASEDSKLLSPELSGFIGGVYAGSNVGLGKDLILGIDTDMVWSG 114
Query: 115 ------------------------DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+D Y LKEK G ++ G+ VD ++ Y GG
Sbjct: 115 KKYTKVVNVPGDIEKVTYRFIKRPNDRFDYVLKEK--WAGATRMRVGFIVDRVMPYVSGG 172
Query: 151 FGGAYVIDSSLEKVESDNSKNAKG------RFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ S E S+ K G +G G+D + ++ + A YR
Sbjct: 173 VSYVQL-QSVFEVKSSNTQKQNVGINEVKLDETKILVGYSIGGGIDVAMTDNVVMRAEYR 231
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + + +G+ F
Sbjct: 232 YSDFGKKKFAEEDG-------ELSYKTNDFRVGVAYKF 262
>gi|13470603|ref|NP_102172.1| outer membrane protein-like [Mesorhizobium loti MAFF303099]
gi|14021345|dbj|BAB47958.1| outer membrane protein-like [Mesorhizobium loti MAFF303099]
Length = 430
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 18/202 (8%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRK--TYNSLLPNGL--GIELGHNIQLEDFVFG 105
W+G YVG + H L + N + G+ +G++ +V G
Sbjct: 237 PTYNWTGFYVGGALGAGTAVHDLGVDLGGGALDLNGIGSEGVLGEASIGYDYDFGSWVAG 296
Query: 106 INCHTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSS 160
+ + + D +K D + + G V +S L Y +GG+ + +
Sbjct: 297 VQLDASYSGIRSKLDIPGGSIKLDNDYGFDALARVGAKVNESTLAYVIGGYSYQHFDLHA 356
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ V D + S +G GL+ V+ ++++ YRY ++
Sbjct: 357 SDPVGD--------IIDWNKSGFTVGGGLETAVSSNMTVGLEYRYSQFGKKDFSSEFGAP 408
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D D K + +G F
Sbjct: 409 DGTLTD-KASFQTVRIGAKYKF 429
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 20/199 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINC 108
WSG Y+G+ H + +N + NG+ + G++ + D F+ G
Sbjct: 38 FNWSGAYIGIGGGFGASVHKFS-VAPIIDFNGIGGNGVFGELTAGYDYMVSDRFLLGGFI 96
Query: 109 HTTAAKDDSTFYRLKEKYFI---YG-DVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEK 163
+ + YG DV L+AGY ++ L Y +GG+ +
Sbjct: 97 DANGGNIGPSISIPGADIDLTNSYGFDVGLRAGYLLNPDTLGYVLGGYSWQHFKLDGSGF 156
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
E F + S VLG+G++ ++ + +L YRY + SV + S
Sbjct: 157 AEG-------LNFTQNRSGYVLGVGMETVLRGNWTLKTEYRYAAYGDKSVIDFGGGS--- 206
Query: 224 RVDRKGNAHIASLGINMHF 242
++ + + H + N F
Sbjct: 207 -LNVEPSTHTFHIAANYRF 224
>gi|296446779|ref|ZP_06888717.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
gi|296255654|gb|EFH02743.1| putative outer-membrane immunogenic protein precursor [Methylosinus
trichosporium OB3b]
Length = 312
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 80/259 (30%), Gaps = 71/259 (27%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRK-------------TYNSLLPNGL----------G 90
W+G YVGL+ + A T ++S +GL G
Sbjct: 43 WAGLYVGLNAGWAWGGTSEARTYGYSVYDWASGALGMPFGFSSPYVSGLASLQQDGFIGG 102
Query: 91 IELGHNIQLED--FVFGINCHTTAAKD---------------------DSTFYRLKEKYF 127
++G+N + F+FG+ + + ++
Sbjct: 103 AQIGYN-HVGPAGFLFGVETDFDGSTLRGSGASNGFASQVDAHGLLHLQAGRADVRAGLG 161
Query: 128 IYGDVVLKAGYSVDSLLI-YGMGGF--GGAYVIDSSLEKV---------ESDNSKNAKGR 175
G V + GY + L+ YG GG GG + S+L + A G
Sbjct: 162 WLGSVRGRFGYFFNPALLFYGTGGLAYGGTFGSISTLGFHWHPQDPIGHPDNPVLPAWGS 221
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN------------SNAKSDVE 223
FD + G G ++ S+ Y V+ S A +V
Sbjct: 222 FDAARVGWIAGGGFEWSFAPQWSVKTEALYYDLGSRRVSTFPSALVNPAAPSSIAVLNVA 281
Query: 224 RVDRKGNAHIASLGINMHF 242
+ + IA LG+N HF
Sbjct: 282 TTRFRYDGVIARLGVNYHF 300
>gi|319898374|ref|YP_004158467.1| Pap31 [Bartonella clarridgeiae 73]
gi|319402338|emb|CBI75877.1| Pap31 [Bartonella clarridgeiae 73]
Length = 292
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/298 (16%), Positives = 90/298 (30%), Gaps = 87/298 (29%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + A D+ +P++ W+G YVG I +
Sbjct: 12 VALMTAYAAQAADITVPQETGE--------TIVVAPAFSWTGFYVGGQIGGFSSKTSFSS 63
Query: 75 TINRKTYNSL--------LPNGL--GIELGHNIQLED-FVFGINCHT--TAAKDDST--- 118
+ L P+G G G N+ L + + G++ + KD+ T
Sbjct: 64 RDGDDSKKWLPLHKDLWSKPSGFTGGFYTGSNVDLGNGLILGVDTDVIWSGRKDEKTHEV 123
Query: 119 -------------------------------------FYRLKEKYFIYGDVVLKAGYSVD 141
+ LKEK G ++ G++ D
Sbjct: 124 TVELEDKDKNKHQEKSVSRSPVVFADGEEKEVEITKYGHTLKEK--WAGATRIRIGFAAD 181
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG-----------------RFDGHGSSVV 184
++ Y GG + DS V AK
Sbjct: 182 RIMPYVAGGVAYTQLQDSFSTSVSRQKVSGAKAERADKEPSAEPNTVNTVDESKTMIGYT 241
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+D+ + ++ L A YRY ++N ++++ A+ +G+ F
Sbjct: 242 LGAGVDFAMTDNVVLRAEYRYSDFGKKKLHN-------DKLEVNYKANDFRVGVAYKF 292
>gi|319408577|emb|CBI82232.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1]
gi|319408616|emb|CBI82271.1| putative Hemin-binding protein B [Bartonella schoenbuchensis R1]
Length = 439
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ Y K G ++ G++VD ++ Y GG A + + +E++ + +
Sbjct: 319 TKVYSNTLKQKWSGATRVRIGFAVDRIVPYIAGGVAYAQLQNIFSRSIETEGHEISSSSL 378
Query: 177 DGHG--SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
LG G+D+ + ++ L A YRY K ++++ +
Sbjct: 379 SDKKIMVGYTLGGGVDFAMADNVILRAEYRYSDFGKQ-------KFAKDKLELDYQTNDF 431
Query: 235 SLGINMHF 242
+G+ F
Sbjct: 432 RVGVAYKF 439
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 47/143 (32%), Gaps = 33/143 (23%)
Query: 15 LSIVVPNHSLAVDLYLPR-----------------KIDLFNEADNNVEYQDDEYGIWSGN 57
+++ + + A D+ +PR +++ +D + W+G
Sbjct: 12 ITLFTASVAQAADIMVPRESRPVVSPPQASKQISPPVEMSPNSDIPPVISAPTFS-WNGF 70
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGL-------------GIELGHNIQLED-FV 103
Y+G I + +K ++ + G+ G N+ L + F+
Sbjct: 71 YLGGQIG-GFSGKTGISLYAKKGPSTREWTPVEKDTVPQLSGFMGGLYAGANVDLGNSFI 129
Query: 104 FGINCHTTAAKDDSTFYRLKEKY 126
G++ + T K K+
Sbjct: 130 LGVDTDIVWSNKQDTKIVAKRKF 152
>gi|315498453|ref|YP_004087257.1| porin [Asticcacaulis excentricus CB 48]
gi|315416465|gb|ADU13106.1| porin [Asticcacaulis excentricus CB 48]
Length = 199
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 51/174 (29%), Gaps = 18/174 (10%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG---LGIELGHNIQLEDFVFGINCH 109
+SG Y+ + + T ++ G G+ LG N Q VFG+
Sbjct: 23 DFSGPYIAGQGGYAKTKLEVTYSAGTTTESASDDTGNGAAGVILGFNAQSNGAVFGVETD 82
Query: 110 TTAAKDDS----TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
++ G V + G+ + L YG G G + E
Sbjct: 83 LNWNNAKDRYRVLGEEVETGIDYSGAVRARLGFVSGNTLFYGAAGVAGTRAYVEYDGEKE 142
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
++ GIG D+ + + YRY + A+
Sbjct: 143 TETVA-----------GWTAGIGADHAFSDRVFGRIEYRYTDFGDVEDDGVKAE 185
>gi|254696546|ref|ZP_05158374.1| outer membrane protein, putative [Brucella abortus bv. 2 str.
86/8/59]
gi|254705298|ref|ZP_05167126.1| outer membrane protein, putative [Brucella suis bv. 3 str. 686]
gi|260760923|ref|ZP_05873266.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|261756008|ref|ZP_05999717.1| outer membrane protein [Brucella suis bv. 3 str. 686]
gi|260671355|gb|EEX58176.1| outer membrane protein [Brucella abortus bv. 2 str. 86/8/59]
gi|261745761|gb|EEY33687.1| outer membrane protein [Brucella suis bv. 3 str. 686]
Length = 158
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 23/164 (14%)
Query: 90 GIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYF----------IYGDVVLKAGY 138
G+ G+N + F+ G++ + + + G V +AGY
Sbjct: 7 GLYTGYNFDTGNNFILGLDANVDYNNLKKSRDFITSGNPVQTTGETQLRWSGAVRARAGY 66
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
++D + Y GG A+ + ++ + S +K + + +G G+DY ++
Sbjct: 67 AIDRFMPYIAGGV--AFGGIKNSLRIGGEESSKSKTQ-----TGWTVGAGIDYAATDNVL 119
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L YRY + N + + LG+ F
Sbjct: 120 LRLEYRYTDY-----GKKNFGLNDLDTRGSFKTNDIRLGVAYKF 158
>gi|319408048|emb|CBI81702.1| Hemin binding protein C [Bartonella schoenbuchensis R1]
Length = 296
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 77/300 (25%), Gaps = 78/300 (26%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
V+ SI + A + W+G Y+G I
Sbjct: 6 VITASIFALVSASAAQ--AADMPVQERPTTVLPQVVVAPAFSWTGFYLGGQIGGFSSNSS 63
Query: 72 LADTINR------------KTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST 118
T N K + G+ G N+ + FV G++ + D ++
Sbjct: 64 SKGTYNNVPNGTKEILVDNKAFPKFSGFVGGLYAGSNVDFGNGFVLGVDTDIVWSGDKAS 123
Query: 119 FYR-----------------------------------------------LKEKYFIYGD 131
+ + G
Sbjct: 124 KSKSYEVAAKPDTPIGDFNPADGVSGGGYLGVATRAKDEGSQIAKPAKGDVTFSDKWSGA 183
Query: 132 VVLKAGYSVDSLLIYGMGGFGG----AYVIDSSLEKVESDNSKNAKGRFDGHG-----SS 182
++ G + D ++ Y GG A V ++ + + + +G
Sbjct: 184 TRVRLGAAFDRVMPYVAGGVAYSQLKASVENAKASGAQKAEGTSVEKPLEGLSDSKTMVG 243
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+D+ + + L A YRY D VD K N +G+ F
Sbjct: 244 YTLGAGVDFAMTDTVMLRAEYRYSDF-----GKKKFVKDKVEVDLKTND--FRVGVAYKF 296
>gi|170750637|ref|YP_001756897.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657159|gb|ACB26214.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 278
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 72/242 (29%), Gaps = 61/242 (25%)
Query: 54 WSGNYVGLHISRLY--------------ETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
W+G Y G++ + + T+ S G ++G+N Q+
Sbjct: 42 WTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQI 101
Query: 100 ED---FVFGINCHTT------------AAKDDSTFYRLK-----EKYFIYGDVVLKAGYS 139
V G+ + + Y L +G V + GY+
Sbjct: 102 TPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYA 161
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV------ 193
D L+YG GGF +D S D + +G G++Y +
Sbjct: 162 FDRTLVYGTGGFAYGSG--------SADRSFGGYAGNDSFRTGWAVGGGIEYALPTDSFL 213
Query: 194 ----NYDISLSASYRYIPHHIHSVN--------NSNAKSDVERV-DRKGNAHIASLGINM 240
+ ++L Y+ ++ N +N + R + G+N
Sbjct: 214 NFFRSSAVTLKVEGLYVNLDRNTRNQGAFVINAANNFPVVYSGIGRRSDEFAVVRAGLNY 273
Query: 241 HF 242
F
Sbjct: 274 KF 275
>gi|163867925|ref|YP_001609129.1| hemin binding protein D [Bartonella tribocorum CIP 105476]
gi|161017576|emb|CAK01134.1| hemin binding protein D [Bartonella tribocorum CIP 105476]
Length = 279
Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 71/249 (28%), Gaps = 63/249 (25%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNS---------LLPNGLGIELGHNIQLE 100
W+G Y+G I + L G+ G NI ++
Sbjct: 38 PSFSWTGFYLGGQIGNFSGKTTANYLTKETGIWNPVEKEYLPKLSGFMGGVYAGSNIDID 97
Query: 101 D-FVFGINCHTTAAKDDST------------------------------------FYRLK 123
+ F+ GI+ + ST
Sbjct: 98 NGFIIGIDTDVMWSNKKSTKDILLPKKDETGEKKSLEKTSHTRDSHEDASTTLVEGVSHT 157
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES----DNSKNAKGRFDG- 178
K G +K G++ + ++ Y GG + + V+S D+ A D
Sbjct: 158 LKQKWSGATRVKVGFAFERMMPYVSGGIAYTQLQNILSAVVDSATVADSESRAIDSSDWL 217
Query: 179 -----HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
LG G+D+ + ++ + A YRY K ++V+ +
Sbjct: 218 HDEKKTMIGYTLGGGVDFAMTDNVIVRAEYRYSDFGKK-------KFVQDKVEMSYKTND 270
Query: 234 ASLGINMHF 242
+G+ F
Sbjct: 271 FRVGVAYKF 279
>gi|319406585|emb|CBI80227.1| Hemin binding protein D [Bartonella sp. 1-1C]
Length = 274
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 79/277 (28%), Gaps = 63/277 (22%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEY-----------GIWSGNYVGLHISRLYETH 70
H L + + + AD +Q Y W+G YVG I
Sbjct: 5 HLLVACSWTFIPVSMVQAADIMRPHQSQSYQPVPVISSSNNFSWTGFYVGAQIGGFSGEA 64
Query: 71 PLADTIN-------RKTYNSLLPNGL-----GIELGHNIQLED-FVFGINCHT------- 110
+ T + + ++ + L GI G N+ L + GI+
Sbjct: 65 TRSPTQDSVEEDSEGQEFSKIKSPKLSGFIGGIYAGSNVSLNKGLILGIDADVVWSGKKN 124
Query: 111 --------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
++ S + G ++ G++VD ++ Y GG +
Sbjct: 125 TKVFDVQDMNILERSSTDVSSISISHSLQEKWAGATRMRVGFAVDRVVPYVSGGVSYVQL 184
Query: 157 IDSSLEKVESDNSKNAKG-----------RFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ K + A+ +G G+D + ++ + A YRY
Sbjct: 185 QNVFTAKGLARALAQARSASPSGSETKVLDETKILVGYSVGGGVDVAMTDNVIMRAEYRY 244
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N VD + +G+ F
Sbjct: 245 SDFGKKKFAKDN-------VDLSYKTNDFRVGVAYKF 274
>gi|261317611|ref|ZP_05956808.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94]
gi|265988645|ref|ZP_06101202.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1]
gi|261296834|gb|EEY00331.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis B2/94]
gi|264660842|gb|EEZ31103.1| LOW QUALITY PROTEIN: porin [Brucella pinnipedialis M292/94/1]
Length = 134
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 8/123 (6%)
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS--LEKVESDNSKNAKGRFDGH 179
+ K G V + G ++D + Y GG V +S + +ES +K
Sbjct: 18 VDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKT----- 72
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+ G G+DY ++ + YRY + + + VE K H LG+
Sbjct: 73 MTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNKFKTHDIRLGVA 131
Query: 240 MHF 242
F
Sbjct: 132 YKF 134
>gi|21106560|gb|AAM35363.1| membrane protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 474
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 61/221 (27%), Gaps = 41/221 (18%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG----------LGIELGHNIQLEDFVFGI--- 106
G + + P G LG++ Q ++V+G+
Sbjct: 257 GDQVGTATGADAFSPGFCGGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAE 316
Query: 107 ------NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVI 157
+A FY + + + GY+ + L Y G
Sbjct: 317 YTRNDVRDSVSAFSTTPAFYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFD 376
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY------------ 205
S +++ ++ G GIGL ++ +S+ Y +
Sbjct: 377 HSFASSNTANSFTSSGGD---SADGYQAGIGLQRRLSDKVSVGVEYLFTRLQDDDTRVRV 433
Query: 206 ----IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
P + + A +D+ R D + + L F
Sbjct: 434 GPGTAPATNPFLRVNPAGTDLRRTDTDVSTNAVRLTATYRF 474
>gi|296446346|ref|ZP_06888291.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Methylosinus trichosporium OB3b]
gi|296256119|gb|EFH03201.1| putative 31 kDa outer-membrane immunogenic protein precursor
[Methylosinus trichosporium OB3b]
Length = 247
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/210 (20%), Positives = 71/210 (33%), Gaps = 37/210 (17%)
Query: 54 WSGNYVGLHISRLY-ETHPLADTI---NRKTYNSLLPN-----------GLGIELGHNIQ 98
W+G Y+G ++ + + + ++I N + + PN G ++G+N Q
Sbjct: 40 WTGFYLGANVGYGWLDNYTRGNSITGWNGAGWVAGAPNVADNGSSNGGVVGGGQVGYNYQ 99
Query: 99 LED-FVFGINCHTTAAKDDS---TFYRLKEKYFIYGDVVLKAGYSVDS--LLIYGMGGFG 152
+V G+ AA +F +G V + G ++ S LLIYG GGF
Sbjct: 100 FHPAWVVGVEADMQAANIGDNGPSFLGTTRAVDWFGTVRARIGTTLFSPELLIYGTGGFA 159
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
V G G+ G GL+++ + S Y Y
Sbjct: 160 YGDVRLKH----------ALLGTLGQTGTGWTAGGGLEWLFAPNWSAKVEYLYTDIGSSD 209
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N V G+N HF
Sbjct: 210 WGGFNNFEQRVHVQS------VRAGVNYHF 233
>gi|146342734|ref|YP_001207782.1| hypothetical protein BRADO5904 [Bradyrhizobium sp. ORS278]
gi|146195540|emb|CAL79567.1| hypothetical protein with a putative signal peptide; putative
pertactin (N-terminal) and outer-membrane immunogenic
protein (C-terminal) [Bradyrhizobium sp. ORS278]
Length = 603
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 32/209 (15%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTT----------- 111
S D T G ++G+N Q +VFG+
Sbjct: 388 SAGRTDVRFGDPATNSTRPWTSGVFGGGQVGYNYQFAGSWVFGVEGDIGAANIHGARTVG 447
Query: 112 ----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS------- 160
A S ++ ++K + GY + L Y GG ++
Sbjct: 448 NQAFGAGLTSAYFVAEDKTNWVASATARLGYGLGRTLWYVKGGAAFEDGRTTATCYNPNG 507
Query: 161 --LEKVESDNSKNAKGRFDGHG-----SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ V ++ + G G +G G ++ + + S A Y Y+ +
Sbjct: 508 VAIGSVCNNAAGVVFASGTGFGISNTRVGWTIGYGTEFDLGRNWSAKAEYDYLSFGRYRA 567
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+S+ + + + + +G+N F
Sbjct: 568 LSSDGTTTLSA--KADSISQVKIGLNYRF 594
>gi|170751779|ref|YP_001758039.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170658301|gb|ACB27356.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 279
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 71/242 (29%), Gaps = 61/242 (25%)
Query: 54 WSGNYVGLHISRLY--------------ETHPLADTINRKTYNSLLPNGLGIELGHNIQL 99
W+G Y G++ + + T+ S G ++G+N Q+
Sbjct: 43 WTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQI 102
Query: 100 ED---FVFGINCHTT------------AAKDDSTFYRLK-----EKYFIYGDVVLKAGYS 139
V G+ + + Y L +G V + GY+
Sbjct: 103 TPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYA 162
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV------ 193
D L+YG GGF +D S D + G G++Y +
Sbjct: 163 FDRTLVYGTGGFAYGSG--------SADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFL 214
Query: 194 ----NYDISLSASYRYIPHHIHSVN--------NSNAKSDVERV-DRKGNAHIASLGINM 240
+ ++L Y+ ++ N +N V R + G+N
Sbjct: 215 NFFRSSAVTLKVEGLYVNLDRNTRNQGAFVINAANNFPVVYSGVGRRDDQFAVVRAGLNY 274
Query: 241 HF 242
F
Sbjct: 275 KF 276
>gi|323135849|ref|ZP_08070932.1| porin [Methylocystis sp. ATCC 49242]
gi|322398940|gb|EFY01459.1| porin [Methylocystis sp. ATCC 49242]
Length = 256
Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 71/214 (33%), Gaps = 36/214 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI--ELGHNIQLED-FVFGINCHT 110
W+G Y GL++ + T+ + T N+ G+ ++G+N QL FV G
Sbjct: 42 WTGFYAGLNLGGGWLTNGSNNAGWGWTGNNSNSGGVVGGGQIGYNYQLTPMFVVGAEADF 101
Query: 111 TAAKDDSTFY---------------RLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFG 152
S + +G V + G + S LL+YG GGF
Sbjct: 102 QGTSIGSGGNANNTAWLLGLGWGNGGASARLNWFGTVRGRLGLTFPSMPTLLLYGTGGFA 161
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ S ++ G+ G G ++M + S Y Y ++
Sbjct: 162 YGEIA-----------SNGGFSSWNTTGTGWTAGGGAEWMFWPNWSAKVEYLYTQLSGNN 210
Query: 213 VNNSNAKSDVERV----DRKGNAHIASLGINMHF 242
NN+N H GIN HF
Sbjct: 211 GNNANWAGWGWNGGNNFRTNTRFHTVRAGINYHF 244
>gi|121602037|ref|YP_989465.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614214|gb|ABM44815.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 284
Score = 66.4 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 94/269 (34%), Gaps = 75/269 (27%)
Query: 30 LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL 89
P +F AD + W+G Y+G IS + + D + T++S+ + L
Sbjct: 35 APASSSVFTPADLS----------WTGVYLGGQIS-GFSSKVDIDRYSDNTWSSVEKSLL 83
Query: 90 --------GIELGHNIQLED-FVFGINCHT------------------------------ 110
G+ +G NI L + F+ G+
Sbjct: 84 PEISGFSGGLYVGSNIDLGEGFILGVETDALWSNTGDKKTLPTKKVGAAHRLEAAERNRE 143
Query: 111 -------------TAAKDDSTFYRLKEKYF----IYGDVVLKAGYSVDSLLIYGMGGFGG 153
+AK R+ +Y G + G++V+ + Y GG
Sbjct: 144 DEVVQERRVAAANNSAKAPEANVRMTGEYALRQQWIGATRARVGFAVERFMPYVTGGLAY 203
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ +L + ++N++N++ + + +G GLD+ V+ +I L YR+ +
Sbjct: 204 GQLRGVNLLALATNNTENSE-KEEKLMVGYAVGAGLDFAVSSNIFLRTEYRF-----SDL 257
Query: 214 NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ E+++ + +G+ F
Sbjct: 258 GKKKFAN--EKIEVNYKINDFRVGVAYKF 284
>gi|83956056|ref|ZP_00964538.1| outer membrane protein [Sulfitobacter sp. NAS-14.1]
gi|83839622|gb|EAP78801.1| outer membrane protein [Sulfitobacter sp. NAS-14.1]
Length = 199
Score = 66.0 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 75/208 (36%), Gaps = 35/208 (16%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLAD------TINRKTYNSLLPNGL--GIELGHNIQLED 101
W+G YVG +IS + + D T N + N P+G+ + G++ Q
Sbjct: 12 PAPAWTGGYVGGNISYGFGSLDANDDLASALTTNGFSDNLSEPDGVSAALRAGYDWQFGR 71
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFI------YGDVVLKAGYSV-DSLLIYGMGGFGGA 154
VFG+ D + + + + GY V D+ L YG+ G+ A
Sbjct: 72 GVFGLGAEYNFGSYDGDGEGILAGSGVDVEIQDMATIFARGGYLVKDNFLAYGLLGYSQA 131
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
S ES++ V +G G +YM + + A Y Y
Sbjct: 132 EGEVSLGGDSESEDLD-----------GVTIGFGGEYMFTQNWTGYAEYTYTDFGDVDNT 180
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++D++++ G+N F
Sbjct: 181 DGQLEADLQQIK---------FGVNYRF 199
>gi|163868669|ref|YP_001609878.1| hemin binding protein E [Bartonella tribocorum CIP 105476]
gi|161018325|emb|CAK01883.1| hemin binding protein E [Bartonella tribocorum CIP 105476]
Length = 309
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 8/129 (6%)
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ +S + K G ++ G S ++ Y GG D + D S N
Sbjct: 189 EKNSLTFNHTFKQKWTGATRVRLGLSAHRVMPYIAGGIAYGQFQDVLSTVITGDESFNKT 248
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
LG G+D+ + ++ + A YRY + ++ K +
Sbjct: 249 SDVTKTMVGYTLGGGVDFAMTDNLVVRAEYRYSDFGKKKFK--------DEIEIKYKTND 300
Query: 234 ASLGINMHF 242
GI F
Sbjct: 301 FRAGIAYKF 309
>gi|311280058|ref|YP_003942289.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1]
gi|308749253|gb|ADO49005.1| hypothetical protein Entcl_2757 [Enterobacter cloacae SCF1]
Length = 234
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 67/208 (32%), Gaps = 21/208 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-----GIELGHNIQL-EDFVFGINCH 109
G YVG + T+ + S P + GI+ GH QL + V G+
Sbjct: 27 GWYVGGNFGYGSGTNHDVYVVPGNAEASGTPRDIDGTIGGIQAGHYWQLDNNIVLGVETG 86
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVV--------LKAGYSVDSLLIYGMGGFG-----GAYV 156
AA + Y + KAGY++++ LIY G A
Sbjct: 87 WQAANISGGISNAESISEYYDQIEINQAFNLNFKAGYAIENWLIYTTAGLTVASMDYARG 146
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
S D DG +G G+++ N S + Y+Y +
Sbjct: 147 CYSDPTTTIKDCLDPYDATADGTRVGYNVGAGVEWKFNNSFSAALEYKYTDLGESDAWLA 206
Query: 217 NAKSDVERVDRKG--NAHIASLGINMHF 242
+ + + + + + IN HF
Sbjct: 207 SDANTLNDSYARYKTDYQEITFRINYHF 234
>gi|240850131|ref|YP_002971524.1| hemin binding protein D [Bartonella grahamii as4aup]
gi|240267254|gb|ACS50842.1| hemin binding protein D [Bartonella grahamii as4aup]
Length = 272
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 84/276 (30%), Gaps = 65/276 (23%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
S++ + A D+ P + A W+G Y+G I +
Sbjct: 13 SLISISVVQAADMVTPEQPVPVIAA---------PAFSWTGFYLGGQIGSFSGKTTASYL 63
Query: 76 ---------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHT--------------- 110
I ++ L G+ G NI +++ F+ GI+
Sbjct: 64 KDETGIWNPIGKEDLPKLSGFIGGVYAGSNIDIDNGFIIGIDTDIMWSDKKGTKDINRPK 123
Query: 111 ----------------TAAKDDSTF----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ ++DST R K G +K G++++ ++ Y GG
Sbjct: 124 KSQTEEASSEETNLTRDSHEEDSTIPIEAVRHTLKQKWAGATRVKVGFAIERVMPYVSGG 183
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRF----DGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ + +S+N + LG G+D+ + ++ + A YRY
Sbjct: 184 IAYTQLQNIFGLVADSNNRAVNFSDWLHDEKKTMIGYTLGGGVDFAMTDNVIVRAEYRYS 243
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +G+ F
Sbjct: 244 DFGKKKFVHDKF-------EMGYKTNDFRVGVAYKF 272
>gi|27375114|ref|NP_766643.1| hypothetical protein blr0003 [Bradyrhizobium japonicum USDA 110]
gi|27348250|dbj|BAC45268.1| blr0003 [Bradyrhizobium japonicum USDA 110]
Length = 197
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 55/165 (33%), Gaps = 12/165 (7%)
Query: 80 TYNSLLPNGLGIELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKY--FIYGDV 132
+ +G +G+ Q+ + VFG+ + + F +++ +G
Sbjct: 16 GRHHATGGTVGGHIGYRWQIANSVFGLETQGNWADFKGSNANLAFAGVRDDSTLDAFGLF 75
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+ GY+ +++L+Y GG + N +G GL++
Sbjct: 76 TGQVGYAWNNVLLYVRGGAAVVRDKYRVSDFATGLTIDNGSET----RWGGTVGAGLEFG 131
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ S+ Y ++ V+ + V A A +G
Sbjct: 132 FAPNWSIGVEYDHLFMGRRDVDFF-FSPGLVGVPVGTFAGTARIG 175
>gi|319405308|emb|CBI78922.1| putative Hemin binding protein b [Bartonella sp. AR 15-3]
Length = 367
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 11/127 (8%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS---SLEKVESDNSKNAKGR 175
Y K G ++ G S ++ Y GG + + S++++ +N+ +
Sbjct: 249 TYTHTLKQKWIGTSRIRLGLSAGRVMPYIAGGIAYTKIQGTFAKSIKEIGKENTSASSFD 308
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
LG G D+ + I L + YRY N N K +
Sbjct: 309 SAETMIGYTLGGGFDFAMTDRILLRSEYRYSDFGEKKFNKINLKY--------YKTNDFR 360
Query: 236 LGINMHF 242
+G+ F
Sbjct: 361 VGLAYKF 367
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 21/125 (16%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS--RLYET 69
V L+I + + A D+ +P N++ W G Y+G + + T
Sbjct: 3 VSILAISLTSRIQAADIVVPS----------NLKSISAPVYSWEGFYLGGQMGSFSSFTT 52
Query: 70 HPLAD--------TINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFY 120
D +I+ + L G G N + FV GI+ + +T
Sbjct: 53 LQYNDIDKTKKWNSIDEDFSSDLSGITGGFFAGFNFDWGNRFVLGIDTDIVFSNKRNTKV 112
Query: 121 RLKEK 125
+K K
Sbjct: 113 FVKNK 117
>gi|296446617|ref|ZP_06888558.1| porin [Methylosinus trichosporium OB3b]
gi|296255845|gb|EFH02931.1| porin [Methylosinus trichosporium OB3b]
Length = 723
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 74/271 (27%), Gaps = 77/271 (28%)
Query: 49 DEYGIWSGNYVGLHISRL------------------YETHP---------LADTINRKTY 81
+W+G Y G ++ Y T P +
Sbjct: 30 PPPPLWTGLYGGFNVGGASASSGPIVYATGPTPTGRYLTDPVQWPARARFWSPLNGSIDG 89
Query: 82 NSLLPNGLGIELGHNI---QLEDFVFGINCHTTA------------------AKDDSTFY 120
N G+++G+N L + G + DS
Sbjct: 90 NDGGAFLGGVQIGYNFRFDHLGGIIAGFEADLQGVAQGREMRGVSSVSRNILTRGDSLIN 149
Query: 121 RLKEKYF--IYGDVVLKAGYSVDSL-LIYGMGGFG-----GAYVIDSSLEKVESDNSKNA 172
+ G V + G VD L+YG GG + ++S ++NA
Sbjct: 150 TVDGGGALQFLGTVRARLGLLVDPTVLVYGTGGLAFGGVSYKFGLNSLYANAAGAPAQNA 209
Query: 173 KGRFDGHGS--SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR-KG 229
D + G G+++M SL Y Y + +++ + G
Sbjct: 210 SAALDNLTTRSGWTAGAGVEWMFAPSWSLKGEYLYYSLDSGATRTTSSAYPIAAASAFGG 269
Query: 230 NAH------------------IASLGINMHF 242
NA I +G++ HF
Sbjct: 270 NAGAPADWTTTSAGSPRMSGSIVRVGLDYHF 300
>gi|146338464|ref|YP_001203512.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278]
gi|146191270|emb|CAL75275.1| hypothetical protein BRADO1381 [Bradyrhizobium sp. ORS278]
Length = 549
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 65/191 (34%), Gaps = 17/191 (8%)
Query: 63 ISRLYETHPLADT-INRKTYNSLLPNGLGIELGHNIQLEDFVFGIN-----CHTTAAKDD 116
P+A I ++ G++LG + QL+ FV GI + +
Sbjct: 357 GGGNVAPLPVAAVQIPTAMSSNGSDVVGGLQLGCDYQLDRFVVGIQAMADLGNINVSGPL 416
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L + ++AGY V +L Y GG ++ +
Sbjct: 417 APGLTLNTRTSNLYTATVRAGYLVTPEILAYVRGGAAWTRT-----TVGVANTATGQSAS 471
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER----VDRKGNA 231
+ S +G G+++M + S A Y Y + + + V +K
Sbjct: 472 VAFNRSGWTVGAGVEWMFARNWSAFAEYDYADFGTAT-GVLPGAAAITGGPNVVSQKTQL 530
Query: 232 HIASLGINMHF 242
H A +G+N F
Sbjct: 531 HTAMIGVNYRF 541
>gi|146425515|emb|CAM89327.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425525|emb|CAM89318.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425535|emb|CAM89309.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425545|emb|CAM89300.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425565|emb|CAM89282.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425575|emb|CAM89273.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425585|emb|CAM89264.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425595|emb|CAM89255.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425605|emb|CAM89246.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425615|emb|CAM89237.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425625|emb|CAM89228.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425635|emb|CAM89219.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425645|emb|CAM89210.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425655|emb|CAM89201.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425665|emb|CAM89192.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425675|emb|CAM89183.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425685|emb|CAM89174.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425695|emb|CAM89165.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146425705|emb|CAM89156.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425715|emb|CAM89147.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425725|emb|CAM89138.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425735|emb|CAM89129.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425745|emb|CAM89120.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425755|emb|CAM89111.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425765|emb|CAM89102.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425775|emb|CAM89093.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425785|emb|CAM89084.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425795|emb|CAM89075.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425805|emb|CAM89066.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425815|emb|CAM89057.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425825|emb|CAM89048.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425835|emb|CAM89039.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425845|emb|CAM89030.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425855|emb|CAM89021.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425865|emb|CAM89012.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425875|emb|CAM89003.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425885|emb|CAM88994.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425895|emb|CAM88985.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146425905|emb|CAM88976.2| 25 kDa outer membrane protein [Brucella abortus]
gi|146426370|emb|CAM89822.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426380|emb|CAM89813.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426390|emb|CAM89804.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426400|emb|CAM89795.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426410|emb|CAM89786.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426420|emb|CAM89777.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426430|emb|CAM89768.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426440|emb|CAM89759.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426450|emb|CAM89750.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426460|emb|CAM89741.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426470|emb|CAM89732.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426480|emb|CAM89723.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426490|emb|CAM89714.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426500|emb|CAM89705.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426510|emb|CAM89696.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426520|emb|CAM89687.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426530|emb|CAM89678.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426540|emb|CAM89669.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426550|emb|CAM89660.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426560|emb|CAM89651.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426570|emb|CAM89642.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426580|emb|CAM89633.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426590|emb|CAM89624.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426600|emb|CAM89615.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426610|emb|CAM89606.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426620|emb|CAM89597.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426630|emb|CAM89588.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426640|emb|CAM89579.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426650|emb|CAM89570.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426660|emb|CAM89561.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426670|emb|CAM89552.2| 25 kDa outer membrane protein [Brucella suis ATCC 23445]
gi|146426680|emb|CAM89543.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426690|emb|CAM89534.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426700|emb|CAM89525.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426710|emb|CAM89516.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426720|emb|CAM89507.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426730|emb|CAM89498.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426740|emb|CAM89489.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426750|emb|CAM89480.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426760|emb|CAM89471.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426770|emb|CAM89462.2| 25 kDa outer membrane protein [Brucella suis]
gi|146426780|emb|CAM89453.2| 25 kDa outer membrane protein [Brucella suis 1330]
gi|146426900|emb|CAM89345.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146426910|emb|CAM89336.2| 25 kDa outer membrane protein [Brucella melitensis]
gi|146427366|emb|CAM90326.2| 25 kDa outer membrane protein [Brucella sp. 5/95]
gi|146427376|emb|CAM90317.2| 25 kDa outer membrane protein [Brucella sp. 59/94]
gi|146427386|emb|CAM90308.2| 25 kDa outer membrane protein [Brucella sp. UK28/03-13840]
gi|146427396|emb|CAM90299.2| 25 kDa outer membrane protein [Brucella sp. F7/99]
gi|146427406|emb|CAM90290.2| 25 kDa outer membrane protein [Brucella sp. F10/99]
gi|146427416|emb|CAM90281.2| 25 kDa outer membrane protein [Brucella sp. F9/99]
gi|146427426|emb|CAM90272.2| 25 kDa outer membrane protein [Brucella sp. F8/99]
gi|146427436|emb|CAM90263.2| 25 kDa outer membrane protein [Brucella sp. F6/99]
gi|146427446|emb|CAM90254.2| 25 kDa outer membrane protein [Brucella sp. UK5/01]
gi|146427456|emb|CAM90245.2| 25 kDa outer membrane protein [Brucella sp. UK40/99]
gi|146427466|emb|CAM90236.2| 25 kDa outer membrane protein [Brucella sp. UK13/99]
gi|146427476|emb|CAM90227.2| 25 kDa outer membrane protein [Brucella sp. 61/94]
gi|146427486|emb|CAM90218.2| 25 kDa outer membrane protein [Brucella sp. 4/96]
gi|146427496|emb|CAM90209.2| 25 kDa outer membrane protein [Brucella sp. 55/94]
gi|146427506|emb|CAM90200.2| 25 kDa outer membrane protein [Brucella sp. UK24/00 (M192)]
gi|146427516|emb|CAM90191.2| 25 kDa outer membrane protein [Brucella sp. 44/94]
gi|146427526|emb|CAM90182.2| 25 kDa outer membrane protein [Brucella sp. 39/94]
gi|146427536|emb|CAM90173.2| 25 kDa outer membrane protein [Brucella sp. UK31/04]
gi|146427546|emb|CAM90164.2| 25 kDa outer membrane protein [Brucella sp. VLA04/06]
gi|146427556|emb|CAM90155.2| 25 kDa outer membrane protein [Brucella sp. VLA04/105]
gi|146427566|emb|CAM90146.2| 25 kDa outer membrane protein [Brucella sp. VLA04.72]
gi|146427576|emb|CAM90137.2| 25 kDa outer membrane protein [Brucella sp. VLA04.67]
gi|146427586|emb|CAM90128.2| 25 kDa outer membrane protein [Brucella sp. F96/2]
gi|146427596|emb|CAM90119.2| 25 kDa outer membrane protein [Brucella sp. F23/97]
gi|146427606|emb|CAM90110.2| 25 kDa outer membrane protein [Brucella sp. UK15/02]
gi|146427616|emb|CAM90101.2| 25 kDa outer membrane protein [Brucella sp. UK10/01]
gi|146427626|emb|CAM90092.2| 25 kDa outer membrane protein [Brucella sp. UK4/01]
gi|146427636|emb|CAM90083.2| 25 kDa outer membrane protein [Brucella sp. UK10/00]
gi|146427646|emb|CAM90074.2| 25 kDa outer membrane protein [Brucella sp. UK5/97]
gi|146427656|emb|CAM90065.2| 25 kDa outer membrane protein [Brucella sp. UK3/97]
gi|146427666|emb|CAM90056.2| 25 kDa outer membrane protein [Brucella sp. UK1/97]
gi|146427676|emb|CAM90047.2| 25 kDa outer membrane protein [Brucella sp. 2/96]
gi|146427686|emb|CAM90038.2| 25 kDa outer membrane protein [Brucella sp. 14/95]
gi|146427696|emb|CAM90029.2| 25 kDa outer membrane protein [Brucella sp. UK35/99]
gi|146427706|emb|CAM90020.2| 25 kDa outer membrane protein [Brucella sp. UK15/98]
gi|146427716|emb|CAM90011.2| 25 kDa outer membrane protein [Brucella sp. 52/94]
gi|146427726|emb|CAM90002.2| 25 kDa outer membrane protein [Brucella sp. 36/94]
gi|146427846|emb|CAM89894.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427856|emb|CAM89885.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427866|emb|CAM89876.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427876|emb|CAM89867.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427886|emb|CAM89858.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427896|emb|CAM89849.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427906|emb|CAM89840.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427916|emb|CAM89831.2| 25 kDa outer membrane protein [Brucella suis]
gi|146427988|emb|CAM90407.2| 25 kDa outer membrane protein [Brucella sp. F5/02]
gi|146428001|emb|CAM90398.2| 25 kDa outer membrane protein [Brucella sp. F5/99]
gi|146428011|emb|CAM90389.2| 25 kDa outer membrane protein [Brucella sp. VLA05/8]
gi|146428021|emb|CAM90380.2| 25 kDa outer membrane protein [Brucella sp. VLA05/4]
gi|146428031|emb|CAM90371.2| 25 kDa outer membrane protein [Brucella sp. UK3/05]
gi|146428041|emb|CAM90362.2| 25 kDa outer membrane protein [Brucella sp. 14/94]
gi|146428051|emb|CAM90353.2| 25 kDa outer membrane protein [Brucella sp. UK2/2000]
gi|146428061|emb|CAM90344.2| 25 kDa outer membrane protein [Brucella sp. UK1/2000]
gi|146428071|emb|CAM90335.2| 25 kDa outer membrane protein [Brucella sp. UK43/99]
gi|170015689|emb|CAP05282.1| 25 kDa outer membrane protein [Brucella sp. BO1]
Length = 163
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 15/177 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 2 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 60
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 61 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 117
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY ++ ++ Y G G+ + + N G GL+ +
Sbjct: 118 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKL 163
>gi|146427796|emb|CAM89939.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427806|emb|CAM89930.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427816|emb|CAM89921.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427826|emb|CAM89912.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427836|emb|CAM89903.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 15/177 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 2 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 60
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 61 ---GSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 117
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY ++ ++ Y G G+ + + N G GL+ +
Sbjct: 118 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKL 163
>gi|319404477|emb|CBI78084.1| Hemin binding protein D [Bartonella rochalimae ATCC BAA-1498]
Length = 267
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 46/211 (21%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINR---------KTYNSLLPNGL--GIELGHNIQLE 100
W+G Y G I ++ + I+ + +S +G+ G+ G NI +
Sbjct: 40 FSWTGFYFGGKIG-VFSGQSTSSFIDSNNVKHNIIFQNQSSPKLSGVVGGLYTGLNININ 98
Query: 101 D-FVFGINCHTTAAKDDST-----FYRLKEKYF----------------IYGDVVLKAGY 138
+ FV G + + T LK + + G+
Sbjct: 99 NGFVLGFDTDINWSGAKDTKVIDIIASLKADNNKKSQIDFDIKQSLQQKWLSAIRGRIGF 158
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKV---ESDNSKNAK---------GRFDGHGSSVVLG 186
S D ++ Y GG + + L+ ++++ + + +G
Sbjct: 159 SFDRVMPYIAGGISVTKLQSTYLKFFVPSKNNSLTRSSLEKTPPVLSTSNSKIMNGYTIG 218
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
GLD+ + + L A Y Y N+N
Sbjct: 219 GGLDFAITDNFILRAEYNYSDFGKKEFVNNN 249
>gi|260459523|ref|ZP_05807778.1| outer membrane protein-like protein [Mesorhizobium opportunistum
WSM2075]
gi|259035077|gb|EEW36333.1| outer membrane protein-like protein [Mesorhizobium opportunistum
WSM2075]
Length = 436
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 73/215 (33%), Gaps = 17/215 (7%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGL--GIEL 93
F + + W+G Y+G + H + + +N L G + +
Sbjct: 229 FGAQNGGGAAFETPAYNWTGFYIGGGLGAGASVHQIEIPPLGGAKFNGLGGEGAFGELNV 288
Query: 94 GHNIQLEDFVFGI----NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGM 148
G++ +V G+ +K D + DV+ + G + +S L Y +
Sbjct: 289 GYDQDFGSWVAGVMVDARYSGMTSKLDLGVGSINVDTDYGFDVLGRVGMKMNESTLAYAL 348
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G+ + ++ + V D S +G GL+ V+ ++++ YRY
Sbjct: 349 AGYSWQHFDLNASDPVGD--------IADWGSSGFSVGAGLETAVSSNMTIGLEYRYSQF 400
Query: 209 HIHSVNNSNAKSDVER-VDRKGNAHIASLGINMHF 242
++ + V + H LG F
Sbjct: 401 AEKDLSFLLGSGAPDGLVTTTPSFHTVRLGAKYKF 435
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 18/166 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINC 108
WSG YVG + H L + N + G+ + G++ + F+ G
Sbjct: 38 FNWSGLYVGFGVGAGANVHKLGSDFIPISLNGIGGEGVYGELTAGYDYMVSPRFLLGGLL 97
Query: 109 HTTA----AKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEK 163
K D+ + + D L+ GY + L Y +GG+
Sbjct: 98 DVHVGDIKTKIDAAGFDASIQETYGFDAGLRVGYLFTPNTLGYVLGGYSWQKYKL----- 152
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
NA FD S +G G++ +N + ++ YRY
Sbjct: 153 -----DSNAGFGFDWDQSGYFVGGGIETAINSNWTIKTEYRYTRFG 193
>gi|296445166|ref|ZP_06887126.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium
OB3b]
gi|296257340|gb|EFH04407.1| hypothetical protein MettrDRAFT_0842 [Methylosinus trichosporium
OB3b]
Length = 467
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 58/189 (30%), Gaps = 17/189 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G ++G H + + L G LG++ Q V G+ +
Sbjct: 285 WTGAHIGAHGGYAFGSTKLTSGSWTGDGVGGAGGVGGALLGYDYQWGRSVLGVEIDGSGG 344
Query: 114 KDDSTFY----RLKEK----YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
ST R Y + +AG S L++G G+ Y ++
Sbjct: 345 GARSTASVTLRRFSANAQIAYDWDYSIRARAGRLFGSTLLFGTVGWTQTYGRLTTAGLGG 404
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ S S V LG G++ M+ + Y + + + D
Sbjct: 405 IETS--------HLFSGVQLGGGVETMLTTHLGARLEYLH-SFYDKYAGVLGSSIDARPT 455
Query: 226 DRKGNAHIA 234
K A +
Sbjct: 456 TGKTRAAVI 464
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 23/191 (12%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHT 110
+W+G +VG I + PLA N T++ + +G+ G+ G + + V GI
Sbjct: 85 LWTGFHVGATIGSGWAITPLA-IPNAATFSGVGMSGVAGGVTAGFDYRFGSVVAGIAADG 143
Query: 111 TAAKDDS--TFYRLKEKYFIYGDVVLKA-GYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ + + + + + G + + L+Y G A + +SD
Sbjct: 144 NLKSTSAYLSGVDVTFREAASWALRGRLGGLASEDTLVYATAGVTQAITKLT-YPTGDSD 202
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
D + + G+G++ + + A Y + + + +E
Sbjct: 203 ---------DVRYTGAIFGVGVETRLAAGLYGRAEYLQSLFGQRNFDGGRYNARLE---- 249
Query: 228 KGNAHIASLGI 238
+ +A +G+
Sbjct: 250 ---SGVARVGL 257
>gi|126729809|ref|ZP_01745622.1| outer membrane protein, putative [Sagittula stellata E-37]
gi|126709928|gb|EBA08981.1| outer membrane protein, putative [Sagittula stellata E-37]
Length = 220
Score = 65.2 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 50/183 (27%), Gaps = 32/183 (17%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
G W+G Y GL + + G+ G++ Q + V G
Sbjct: 69 PVGNWTGGYTGLSLGGAQA---------SSGGSEESGMIYGLHGGYDYQFGNGIVLGGEA 119
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
D S + GY + L+YG G
Sbjct: 120 EFQGNNDLSVNG---FDVDNVSRAKARMGYDLGQALVYGTAGVSKVNTSI---------- 166
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
G +S V G+G++Y V S+ A Y N++ + D +
Sbjct: 167 ---------GEATSPVYGLGMEYKVTDKFSVGAEYLNEDFQDLGSTNTDLQQDSLSLRGN 217
Query: 229 GNA 231
Sbjct: 218 FRF 220
>gi|240849915|ref|YP_002971304.1| hemin binding protein C [Bartonella grahamii as4aup]
gi|240267038|gb|ACS50626.1| hemin binding protein C [Bartonella grahamii as4aup]
Length = 277
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 82/276 (29%), Gaps = 64/276 (23%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
V + + A D+ +P + W+G Y+G + + N
Sbjct: 15 VSVSAAQAADVIVPPSPTPVAPVIVAPTFS------WTGFYLGGQLGGFSGKTKMDILSN 68
Query: 78 RKTYNS-------LLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST----------- 118
K + L G+ G N+ L + + G++ + D T
Sbjct: 69 GKKIPAPDDLLPKLSGFMGGLYAGSNVDLGNGLILGVDTDIMWSNKDDTKTGNTYVILPD 128
Query: 119 ---------------------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGF 151
+ K G ++ G++ + ++ Y GG
Sbjct: 129 HINYIKKILTESGINIGKDALEAGAKRTHSFTFKEKWAGATRVRIGFAAERIMPYVAGGI 188
Query: 152 GGAYVIDS---SLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDISLSASYRYI 206
+ D+ S+ +SD + D + LG G+D + ++ + A YRY
Sbjct: 189 AYTQLQDTASISITGKDSDKVIASGTLSDETKTLVGYTLGAGVDLAMTNNVIVRAEYRYS 248
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+N ++ + +G+ F
Sbjct: 249 DFGKKKFSNDKYET-------SYKTNDFRVGVAYKF 277
>gi|146427736|emb|CAM89993.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427746|emb|CAM89984.2| 25 kDa outer membrane protein [Brucella neotomae]
gi|146427756|emb|CAM89975.2| 25 kDa outer membrane protein [Brucella neotomae]
Length = 163
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 15/177 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 2 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 60
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 61 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 117
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY ++ ++ Y G G+ + + N G GL+ +
Sbjct: 118 GYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKL 163
>gi|21111442|gb|AAM39773.1| membrane protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66572140|gb|AAY47550.1| membrane protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 377
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 41/221 (18%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG----------LGIELGHNIQLEDFVFGINCH 109
G +S + P G+ G++ Q+ D+V+G+
Sbjct: 160 GDQVSTATGADAFSPGFCGGAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAE 219
Query: 110 TTAAKDDSTFYRLKEKYFIY---------GDVVLKAGYSV---DSLLIYGMGGFGGAYVI 157
T + +Y + + GY+ L Y G
Sbjct: 220 YTRNDLRDSVSAFSTTPALYTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFD 279
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY------------ 205
S S+ + + G + GIGL ++ +S+ Y +
Sbjct: 280 HS---FASSNTANSFTGSGGDSANGYQAGIGLQRRLSDHVSVGVEYLFTRLQDEDTRVRV 336
Query: 206 ----IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
P + + A +D+ R D +++ L + F
Sbjct: 337 GPGTAPATNPFLRVNPAGTDLRRTDTDFSSNAIRLTASYRF 377
>gi|146425555|emb|CAM89291.2| 25 kDa outer membrane protein [Brucella melitensis]
Length = 163
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 15/177 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 2 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 60
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + L+ K G + +
Sbjct: 61 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARV 117
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY ++ ++ Y G G+ + + N G GL+ +
Sbjct: 118 GYDLNPVMPYLTAGIVGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKL 163
>gi|240851183|ref|YP_002972586.1| hemin binding protein C [Bartonella grahamii as4aup]
gi|240268306|gb|ACS51894.1| hemin binding protein C [Bartonella grahamii as4aup]
Length = 296
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/294 (17%), Positives = 83/294 (28%), Gaps = 66/294 (22%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
++F + S ++ + P+ + + WSG Y G I
Sbjct: 10 SIFTFITTSTAQAADTVIFEQSKPKVSLQNDSSSRITPVTVSAPFSWSGFYFGGQIGYFS 69
Query: 68 ETHPLADTINRKTYN--------SLLPNGL--GIELGHNIQLED-FVFGINCHTTAAKDD 116
+ L + S P+GL G+ G NI L D VFG + +
Sbjct: 70 SKNTLDYAQEARDGKWAWVDRNLSPKPSGLRAGLYAGSNIDLGDDLVFGFDTDIVWSGRK 129
Query: 117 ST-------------------------------------------FYRLKEKYFIYGDVV 133
ST + K G
Sbjct: 130 STQTDNGKKILNELDSINIAFKEAGIPIIKPAAQDETIPNYGDIVVSSVTLKEKWSGAAR 189
Query: 134 LKAGYSVDSLLIYGMGGFGGAYV--IDSSLEKVESDNSKNAKGR-FDGHGS--SVVLGIG 188
+ G++ L+ Y GG + I S L K + D++ A G D + +G G
Sbjct: 190 ARIGFASHRLMPYIAGGIAYTQMQYIMSLLSKSQEDSTVFASGNVLDKTKTLFGYTVGGG 249
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D + +I + YRY N + + H GI F
Sbjct: 250 FDLAMTDNIIMRTEYRYSDFFKKKFANDD-------LKISSQTHDVRFGIAYKF 296
>gi|170747715|ref|YP_001753975.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654237|gb|ACB23292.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 276
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 68/241 (28%), Gaps = 60/241 (24%)
Query: 54 WSGNYVGLHISRLY-------------ETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
W+G Y G++ + + T+ S G ++G+N Q+
Sbjct: 41 WTGAYFGINAGYAFDASSRTNNTFAVPFPYAAPGTVASFRDRSQDGFSGGAQIGYNWQIT 100
Query: 101 D---FVFGINCHTT------------AAKDDSTFYRLK-----EKYFIYGDVVLKAGYSV 140
V G + + Y + +G V + GY+
Sbjct: 101 PGSGVVIGFEADAQYLDFGRNRNNAFISGAVAPGYYVTDPRGLSSLDYFGTVRGRLGYAF 160
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV------- 193
D L+Y GGF +D S D + +G G++Y +
Sbjct: 161 DRTLVYATGGFAYGSG--------SADRSFGGYAGNDSFRTGYAVGGGIEYALPTDSFLN 212
Query: 194 ---NYDISLSASYRYIPHHIHSVNNSNAKSDVERV---------DRKGNAHIASLGINMH 241
+ ++L Y+ + N + + R + G+N
Sbjct: 213 FFRSSAVTLKVEGLYVNLERGTRNQGALVVNAANLVPVAYSAIGRRDDEFAVVRAGLNYK 272
Query: 242 F 242
F
Sbjct: 273 F 273
>gi|332188913|ref|ZP_08390616.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17]
gi|332011053|gb|EGI53155.1| hypothetical protein SUS17_4025 [Sphingomonas sp. S17]
Length = 285
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 12/129 (9%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTF---------YRLKEKYFIYGDVVLKAGYSVDSL 143
+G + Q + V+G+ ++ + Y + + GY+ +
Sbjct: 113 VGLDHQAGNIVYGVVGEFGKSEITDSVSAFSTTPAWYTMTRSIDWEASARGRLGYAANKT 172
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
L YG G G A + + E S+ + D + + G G++ + + S+ Y
Sbjct: 173 LFYGTFGAGYARI---NREFATSNGANAFAISGDRNQFGFLGGGGIEQKIGRNFSIGMEY 229
Query: 204 RYIPHHIHS 212
Y +
Sbjct: 230 MYHQYRDDD 238
>gi|319403667|emb|CBI77252.1| Hemin binding protein d [Bartonella rochalimae ATCC BAA-1498]
Length = 295
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 89/309 (28%), Gaps = 85/309 (27%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N L ++++ + A D+ +P++I W+G Y+G I
Sbjct: 2 NNMKCLITTSVVALITASAVQAADIRVPQEIGE--------TIVVAPAFSWTGFYLGAQI 53
Query: 64 SRLYETHPLADTINRKTYN--------SLLPNGL--GIELGHNIQLED-FVFGINCHT-- 110
+ + + S P+G G G N+ L + + G++
Sbjct: 54 GGFSSKTSFSGPADDDSKKWLPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDVVF 113
Query: 111 -------------------------TAAKDDS------------------TFYRLKEKYF 127
AKD T Y K
Sbjct: 114 SGQKDTKNDKVTSELDKDNNNNNAPAGAKDKDNGKPEPEKEPEKEKDVKFTQYDHTLKAK 173
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS-------------SLEKVESDNSKNAKG 174
G ++ G++ D ++ Y GG + D+ E + + S +
Sbjct: 174 WAGATRIRIGFAADRIMPYVAGGVAYTQLQDTFTTLTGIKKVPAQKAEGTDKETSGKSNT 233
Query: 175 -RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
L G+D+ + ++ L A YRY ++N + + A+
Sbjct: 234 VDESKTMIGYTLAAGVDFAMTDNVLLRAEYRYSDFGKKKLHNDKFEVN-------YKAND 286
Query: 234 ASLGINMHF 242
+G+ F
Sbjct: 287 FRVGVAYKF 295
>gi|85374383|ref|YP_458445.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594]
gi|84787466|gb|ABC63648.1| outer membrane protein-like [Erythrobacter litoralis HTCC2594]
Length = 223
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 16/178 (8%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV 133
D N S G +G+++ L V G + D+ F + F +G+V
Sbjct: 53 DDGNPNNDQSAEGVIYGAAVGYDVDLGPVVIGPEAEFAWSTADTDFDNGDFEGFGFGNVS 112
Query: 134 L--------KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
+ G + D L Y GG+ A + S N K D
Sbjct: 113 ADRDLYLGARVGAKIGDQALAYVKGGYTNAKLNIRS-------NDGTTKFDTDYDLDGYR 165
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G GL+Y +N ++ ++A YRY + V+ D +R D + H S+G+ + F
Sbjct: 166 VGGGLEYAINRNMFVNAEYRYSNYSRAEVDFDGTLPDSDRFDVDLDRHQVSVGLGVRF 223
>gi|146427766|emb|CAM89966.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427776|emb|CAM89957.2| 25 kDa outer membrane protein [Brucella canis]
gi|146427786|emb|CAM89948.2| 25 kDa outer membrane protein [Brucella canis]
Length = 163
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 15/177 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 2 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 60
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + + K G + +
Sbjct: 61 ---GSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGPEVKQGFEGSLRARV 117
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY ++ ++ Y G G+ + + N G GL+ +
Sbjct: 118 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKL 163
>gi|319406881|emb|CBI80516.1| putative Hemin binding protein b [Bartonella sp. 1-1C]
Length = 379
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 12/122 (9%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGRFDGHG 180
K +G ++ G SV ++ Y GG A V S + + + +
Sbjct: 266 KRKWFGATRIRLGLSVGRVMPYIAGGVAYAKVQGIFKKSIKIGISKETVPLSSFDSEEIM 325
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ LG G D+ V I L A YRY + K NA+ +G+
Sbjct: 326 TGYTLGGGFDFAVTDRILLRAEYRYSDFGAKEFKKVDLKD--------YNANDFRIGLAY 377
Query: 241 HF 242
F
Sbjct: 378 KF 379
Score = 35.5 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 11/80 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTI----------NRKTYNSLLPNGLGIELGHNIQL 99
+ W G Y G I + L +R + G G N +
Sbjct: 37 PFYSWGGFYFGGQIGSFSSSTTLQYNTLDETKKLNLSSRDFTSEFSGGTGGFYAGVNFEY 96
Query: 100 ED-FVFGINCHTTAAKDDST 118
+ FV G++ + +T
Sbjct: 97 GNRFVLGVDTDIVFSNKQNT 116
>gi|163736518|ref|ZP_02143937.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis
BS107]
gi|161390388|gb|EDQ14738.1| hypothetical protein RGBS107_15341 [Phaeobacter gallaeciensis
BS107]
Length = 194
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 57/220 (25%), Gaps = 35/220 (15%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEY------GIWSGNYVGLHISRLYETHP 71
+V ++A L P E G W+G Y+G I +L
Sbjct: 4 IVSMAAIAAALSTPAFAGNLEEPVVAPAPTAPPVVVANDGGDWTGAYIGGQIGQL----- 58
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
+ S G+ G+N FV G A D + G
Sbjct: 59 ---DADTSNGLSGDDVSYGVHAGYNYDFGRFVLGGEIDYDATDVDLGGGAATVDSVMRGK 115
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
V KAGY +L Y GG G + GIG+ Y
Sbjct: 116 V--KAGYDFGPVLAYVTGGVAQVDTSV-------------------GDETGEFYGIGVAY 154
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V ++ + +A + +
Sbjct: 155 RVTDQWTVGGEVLEHDFDNLGSSGISADATTVSLRASYQF 194
>gi|146426790|emb|CAM89444.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426800|emb|CAM89435.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426810|emb|CAM89426.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426820|emb|CAM89417.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426830|emb|CAM89408.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426840|emb|CAM89399.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426850|emb|CAM89390.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426860|emb|CAM89381.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426870|emb|CAM89372.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426880|emb|CAM89363.2| 25 kDa outer membrane protein [Brucella ovis]
gi|146426890|emb|CAM89354.2| 25 kDa outer membrane protein [Brucella ovis]
Length = 163
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 15/177 (8%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
++V L + + + W+G Y GL++ + +
Sbjct: 2 VIVSAALLPFSATAFAADAIQEQPPVPAPVEVAPQYSWAGGYTGLYLGYGWNKAKTSTV- 60
Query: 77 NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKA 136
G G N Q + V+G+ + + + L+ K G + +
Sbjct: 61 ---GSIKPDDWKAGAFAGWNFQQDQIVYGVEGNAGYSWAKKSKDGLEVKQGFEGSLRARV 117
Query: 137 GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
GY ++ ++ Y G G+ + + N G GL+ +
Sbjct: 118 GYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKL 163
>gi|49473903|ref|YP_031945.1| hemin binding protein c [Bartonella quintana str. Toulouse]
gi|21689903|gb|AAM68128.1| hemin-binding protein C [Bartonella quintana]
gi|49239406|emb|CAF25744.1| Hemin binding protein c [Bartonella quintana str. Toulouse]
Length = 277
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 70/244 (28%), Gaps = 58/244 (23%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYN-------SLLPNGLGIELGHNIQLED- 101
W+G Y+G I + N KT+ L GI +G N+ L +
Sbjct: 41 PTFSWTGFYIGGQIGGFSSKTKMNILANGKTFPVKDDLLPKLSGFMGGIYVGSNVDLGNG 100
Query: 102 FVFGI---------------------------------NCHTTAAKDD-----STFYRLK 123
+ G+ + +D +
Sbjct: 101 LILGVDTDIIWSDKKYTKTGKVYEITEQHIPYIKKMLTEAGIAISNNDLKPGAKRVHSFT 160
Query: 124 EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN-----AKGRFDG 178
K G ++ G++ + ++ Y GG + D +++ +S
Sbjct: 161 FKEKWAGATRVRIGFAAERIMPYVAGGIAYTQLQDIGSISIKNKDSSKVIASGNLSDETK 220
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
LG G+D + ++ + A YRY K +++ + +G+
Sbjct: 221 TFVGYTLGAGVDLAMTNNVVVRAEYRYSDFGKK-------KFTKGQLETSYKTNDFRVGV 273
Query: 239 NMHF 242
F
Sbjct: 274 AYKF 277
>gi|126735153|ref|ZP_01750899.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2]
gi|126715708|gb|EBA12573.1| hypothetical protein RCCS2_14789 [Roseobacter sp. CCS2]
Length = 230
Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 77/213 (36%), Gaps = 25/213 (11%)
Query: 48 DDEYGIWSGNYVGLHISRLYE---------THPLADTINRKTYNSLLPNGLGIELGHNIQ 98
D+ WSG Y G ++ D +++ LG G NI
Sbjct: 25 ADQPFDWSGTYGGFNLDLADPILSGIQDCCADDPGDDPGNLDPSAV---ALGGHFGFNIV 81
Query: 99 LEDFVFGINC--------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+V+G+ + ++ + G + + G +++G+ G
Sbjct: 82 QNQWVYGVEGAFFYGGLVDSQLSQSEPIANESDIDINGIGSLRGRIGRIAGDAMVFGILG 141
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHH 209
A + + ++ N+KG D G ++G G+D + + S SY R+I
Sbjct: 142 ASYADATYTMRD----PDAANSKGSADLSGWGYMIGAGIDLPLTENTSARVSYERHIFDT 197
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++ S+ E + N + GI+MHF
Sbjct: 198 RVATDDLTTDSNEEDFVKLENVDVLHFGISMHF 230
>gi|302383863|ref|YP_003819686.1| membrane protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194491|gb|ADL02063.1| membrane protein [Brevundimonas subvibrioides ATCC 15264]
Length = 275
Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 42/167 (25%), Gaps = 12/167 (7%)
Query: 71 PLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
P + + +G G G++ Q V GI + + Y
Sbjct: 79 PQGNNAGAGCRDDDDGSGEFGARAGYDFQTGPVVVGIVADFSKVNPQDSVSAFSTTPANY 138
Query: 130 G---------DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
+ G + L Y GG+ A + D +++
Sbjct: 139 AFKREVQHLFGARFRLGLAYGRYLPYVTGGYASAQIEDKYSTSNTANSFT--PTTQSQDA 196
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
LG G++ V + S+ Y Y +
Sbjct: 197 DGYQLGGGIETRVTSNFSVGLEYLYTDIDADPLTVRTGPGTAPPTSN 243
>gi|163867545|ref|YP_001608744.1| hemin binding protein C [Bartonella tribocorum CIP 105476]
gi|161017191|emb|CAK00749.1| hemin binding protein C [Bartonella tribocorum CIP 105476]
Length = 277
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 82/277 (29%), Gaps = 66/277 (23%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
V + + A D+ +P + W+G Y G I + D +
Sbjct: 15 VSVSAAQAADVIVPPSPTPVAPVIVAPTFS------WTGFYFGGQIG-GFSGKTKMDILA 67
Query: 78 RKTY--------NSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDST---------- 118
+ L G+ G NI L + + G++ + D T
Sbjct: 68 KGQKIPVSDDYLPKLSGFMGGLYAGSNIDLGNGLILGVDTDIMWSNKDDTKTGKTYVIAP 127
Query: 119 ----------------------------FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+ K G ++ G++ + ++ Y GG
Sbjct: 128 GHINYINKILKDAAINIGKDALEAGAKRTHSFTFKEKWAGATRVRIGFAAERIMPYVAGG 187
Query: 151 FGGAYVIDS---SLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDISLSASYRY 205
+ D+ S+ + +SD + D + LG G+D + +I + A YRY
Sbjct: 188 IAYTQLQDTASISITEKDSDKVIASGTLSDETKTLVGYTLGAGVDLAMTNNIIVRAEYRY 247
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+N ++ + +G+ F
Sbjct: 248 SDFGKKKFSNDKYET-------SYKTNDFRVGVAYKF 277
>gi|15420172|gb|AAK97308.1|AF308166_1 Pap31 [Bartonella henselae phage 60457]
Length = 219
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 69/217 (31%), Gaps = 57/217 (26%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY-----NSLLPNGL--GIELGHN 96
W+G Y+G + + D N+K ++ P+G GI G N
Sbjct: 4 PTVISAPAFSWTGFYIGGQVGNFSSKVEITD-PNKKDKLFSKDDTPKPSGFMGGIYAGSN 62
Query: 97 IQLED-FVFGINCHTTAA--------------------------KDDSTFYRLKE----- 124
+ L + + G+ A ++ F + K
Sbjct: 63 MDLGNNMILGVETDAVWADREDAKTSSAKVIREDELVNFKDSLKNANAVFAKDKTMDDVK 122
Query: 125 -----------KYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYV---IDSSLEKVESDNS 169
K G ++ G+ + D ++ Y GG A V + + K D
Sbjct: 123 QDEKHTDSLALKEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTKAADDAE 182
Query: 170 KNAKGRFDGHGS--SVVLGIGLDYMVNYDISLSASYR 204
+ FD + LG G+D+ + ++ L A YR
Sbjct: 183 IASAQLFDKTKTLVGFTLGGGVDFAMTDNVLLRAEYR 219
>gi|220925103|ref|YP_002500405.1| porin [Methylobacterium nodulans ORS 2060]
gi|219949710|gb|ACL60102.1| porin [Methylobacterium nodulans ORS 2060]
Length = 287
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 74/291 (25%), Gaps = 81/291 (27%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH---- 70
++V +LA DL PR++ W+G Y G + + T+
Sbjct: 12 AGVLVAGSALAADL--PRRVAPPPVFTPVPV------FTWTGFYAGFNAGYGFSTNDNNT 63
Query: 71 PLADTINRKTYNSLLPNGL-------------GIELGHNIQLED---FVFGINCHTTAAK 114
P + T P + G ++G+N Q V G+ A
Sbjct: 64 PTVLGVGPATGLVFAPTVIAFQNRNNNDGFVGGGQVGYNYQFTPGSGVVIGLEADAQFAD 123
Query: 115 DDSTFYRLKEKYF----------------IYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
R +G V + GY+ D L+Y GGF
Sbjct: 124 FGRNRNRFLATGPIAAQTVFNPAGISGLDWFGTVRGRLGYAFDRTLVYATGGFAYGSGGG 183
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPH 208
D + G G++Y + + +++ Y+
Sbjct: 184 RDF----------GLPNRDDFQTGWTAGGGVEYALPTDSFLNFFKSNAVTVKVEGLYVNL 233
Query: 209 HIHSVNNSNAKSDVERV-----------------DRKGNAHIASLGINMHF 242
+ + R + G+N F
Sbjct: 234 ERERNRSGAFAVNNAGTLITTASPGVVVVSGANLRRDTEFAVVRAGLNYKF 284
>gi|163869043|ref|YP_001610277.1| hemin binding protein [Bartonella tribocorum CIP 105476]
gi|161018724|emb|CAK02282.1| hemin binding protein [Bartonella tribocorum CIP 105476]
Length = 296
Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 55/298 (18%), Positives = 84/298 (28%), Gaps = 71/298 (23%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYL-----PRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
LF + + + + + A D + P + + WSG Y G +
Sbjct: 6 LFVLSLFTFMTTSTAQAADTVISQQSQPSVSAPSSLSSRLSPVTVSAPFSWSGFYFGGQL 65
Query: 64 SRLYETHPLADTINRKTYN--------SLLPNGL--GIELGHNIQLEDFV---------- 103
L L + S P G G G NI L + +
Sbjct: 66 GHLSSKSTLNYAPESQGGKWALVDRGLSPKPTGFVAGFYAGSNIDLGNSLVVSFDTDMIW 125
Query: 104 ---------------------------FGINCHTTAAKD-------DSTFYRLKEKYFIY 129
GI T+ +D D + K
Sbjct: 126 SGKKNTQTDNGKKILDKLDSVHAAFHDAGIPIITSEVQDETIPNYSDIIVSSVTLKEKWA 185
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYV--IDSSLEKVESDNSKNAKGR-FDGHGS--SVV 184
G + G++ L+ Y GG + I S L K + D++ A G FD +
Sbjct: 186 GAARARIGFASHRLMPYIAGGVAYTQMQYILSLLTKSQEDSTVFASGDVFDKTKTMIGYT 245
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G G D + DI + YRY N + + H LGI F
Sbjct: 246 VGGGFDLAMTDDIIMRTEYRYTDFFKQKFAN-------DELKMSVQTHNFRLGIAYKF 296
>gi|220923245|ref|YP_002498547.1| porin [Methylobacterium nodulans ORS 2060]
gi|219947852|gb|ACL58244.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 62/252 (24%), Gaps = 73/252 (28%)
Query: 54 WSGNYVGLHISRLYETH----PLADTINRKTYNSLLPNGL-------------GIELGHN 96
W+G Y G + + T+ P + T P + G ++G+N
Sbjct: 41 WTGFYAGFNAGYGFSTNDNNTPTVLGVGPATGLVFAPTVIAFQNRNNNDGFVGGGQVGYN 100
Query: 97 IQLED---FVFGINCHTTAAKDDSTFYRLKEKYF----------------IYGDVVLKAG 137
Q V G+ A R +G V + G
Sbjct: 101 YQFTPGSGVVIGLEADAQFADFGRNRNRFLATGPIAAQTVFNPAGISGLDWFGTVRGRLG 160
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV---- 193
Y+ D L+Y GGF D + G G++Y +
Sbjct: 161 YAFDRTLVYATGGFAYGSGGGRDF----------GLPNRDDFQTGWTAGGGVEYALPTDS 210
Query: 194 ------NYDISLSASYRYIPHHIHSVNNSNAKSDVERV-----------------DRKGN 230
+ +++ Y+ + + R
Sbjct: 211 FLNFFKSNAVTVKVEGLYVNLERERNRSGAFAVNNAGTLITTASPGVVVVSGANLRRDTE 270
Query: 231 AHIASLGINMHF 242
+ G+N F
Sbjct: 271 FAVVRAGLNYKF 282
>gi|310816739|ref|YP_003964703.1| TonB-dependent heme/hemoglobin receptor family protein
[Ketogulonicigenium vulgare Y25]
gi|308755474|gb|ADO43403.1| TonB-dependent heme/hemoglobin receptor family protein
[Ketogulonicigenium vulgare Y25]
Length = 1121
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 70/247 (28%), Gaps = 43/247 (17%)
Query: 39 EADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS----------LLPNG 88
+AD G W G Y GL +YN+
Sbjct: 875 QADARSSAVQPFDGNWGGAYAGLTFGAARFAAEGETYAGDGSYNANAAIERTDTAASSAV 934
Query: 89 LGIELGH-NIQLEDFVFGINCHTTAAKDDSTFY-------------------RLKEKYFI 128
G++ G+ Q V G+ A+ + Y +
Sbjct: 935 AGLQFGYRKQQDSGLVLGVEASVDFARGRAQQYMIDETLDVDRWGENNTRAADYTHSWGA 994
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA---KGRFDGHGSSVVL 185
+ G + ++ G G + + N + VV+
Sbjct: 995 TAMLRGSVGQTFGRAHLFATAGLGMMEEHQTRTQYRLVSGIVNYPSFSETDSQLRTGVVV 1054
Query: 186 GIGLDYMVNYDISLSASYRYIPHH------IHSVNNSNAKSDVERVDRKG----NAHIAS 235
G G+DY + +SL Y Y + + N + A ++++ R+ + H
Sbjct: 1055 GAGMDYAFSNALSLRGEYVYGYYPEKNFNFDRASNGTTAAGLLDQIGRQAGSELHTHALR 1114
Query: 236 LGINMHF 242
+G+N F
Sbjct: 1115 IGLNYRF 1121
>gi|163867547|ref|YP_001608746.1| hemin binding protein B [Bartonella tribocorum CIP 105476]
gi|161017193|emb|CAK00751.1| hemin binding protein B [Bartonella tribocorum CIP 105476]
Length = 544
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 18/189 (9%)
Query: 60 GLHIS--RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
G H S R + +P + + ++ + N + ++ G+ D
Sbjct: 368 GGHGSGARGHNANPHSRSHGAQSTQAADKNESSVYGIEQMRRMASELGLEQGDEVETLDH 427
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD----NSKNAK 173
TF K G ++ G++ D + Y GG D+ V+ + S
Sbjct: 428 TF-----KQNWGGATRVRIGFAADRFMPYLAGGIAYGQFQDTISISVKDEEGTVVSSKNL 482
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
LG G+D+ V ++ + A YRY K E+++ +
Sbjct: 483 TDETKTMIGYTLGGGVDFSVLDNVIVRAEYRYSDFGKK-------KFSKEKLEVNYKTND 535
Query: 234 ASLGINMHF 242
+G+ F
Sbjct: 536 FRVGVAYKF 544
>gi|319408046|emb|CBI81700.1| Outer membrane protein, omp25/ropB family [Bartonella
schoenbuchensis R1]
Length = 273
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 8/127 (6%)
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D Y K G ++ G++ D ++ Y GG V + V S N N
Sbjct: 155 DEVTYNTTRKEKWAGATRVRFGFAADRIMPYIAGGIAYTKVQITPWFLVNSANPLNLMTE 214
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
LG G+++ V+ ++ L YRY S V+ + H
Sbjct: 215 KKAM-IGYTLGAGVNFAVSDNVILRGEYRYSDFGKKKFMESP-------VNVSYSTHDLR 266
Query: 236 LGINMHF 242
+G+
Sbjct: 267 VGVAYKL 273
>gi|170740663|ref|YP_001769318.1| porin [Methylobacterium sp. 4-46]
gi|168194937|gb|ACA16884.1| porin [Methylobacterium sp. 4-46]
Length = 284
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 74/260 (28%), Gaps = 53/260 (20%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG------ 88
DL A + W+G Y GLH ++ T+ +N
Sbjct: 23 DLPLRAAPPPVFAAVPVFTWTGFYAGLHTDYVFTERQRITTVGNTAFNQANVAALLRTPT 82
Query: 89 ----------LGIELGHNIQLED---FVFGINCHTTAAKDD-----------STFYRLKE 124
+G +G+N Q V G+ + + K
Sbjct: 83 TFAEVDGFANVGGGIGYNYQFTPGNGLVVGVQADVSWTAIEKNRGYLSPTVPVLVSTYKH 142
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
G VV +AGY+ D ++G+GGF V + + GR +
Sbjct: 143 SLNYLGTVVGRAGYAFDRFFVFGLGGFAFGDVT-TGANFYNGGLALAYTGRTSDVQTGYA 201
Query: 185 LGIGLDYMV------------------NYDISLSASYRYIPHHIHSVNNSN----AKSDV 222
G G++Y + ++L A Y + ++ +N
Sbjct: 202 YGGGIEYAIPADSFLAKFNVLSLLGFQTAAVTLKAEYLHYDLGRRNLLVNNTGLAGSPGS 261
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ ++ G + F
Sbjct: 262 YTSRFQTEGNLVRAGFSYKF 281
>gi|240849916|ref|YP_002971305.1| hemin binding protein A [Bartonella grahamii as4aup]
gi|240267039|gb|ACS50627.1| hemin binding protein A [Bartonella grahamii as4aup]
Length = 288
Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 76/246 (30%), Gaps = 60/246 (24%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYN----SLLPNGL--GIELGHNIQLED-F 102
W+G Y+G + D+ +K + P+G GI +G N+ L +
Sbjct: 50 PSFSWTGFYIGGQVGNFSGKVDEFDSETKKKITDKDWTPKPSGFMGGIYVGSNVDLGNGL 109
Query: 103 VFGINCHTTAAK-------------------------DDSTFYRLKE------------- 124
+ G+ A ++TF K
Sbjct: 110 ILGVETDAVWADREDSKTHSAVIGETGLAAFKNKLTAAEATFASGKNIDNVTKDGKRVEG 169
Query: 125 ---KYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSK--NAKGRFDG 178
K G ++ G++ VD +L Y GG + + K E + + FD
Sbjct: 170 TSIKEKWSGATRVRIGFAAVDRILPYFAGGIAYTQLQVVNSLKAEGADGAEIASAKMFDQ 229
Query: 179 HGS--SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ +G G+D+ + ++ L A YRY + + + +
Sbjct: 230 SKTMVGFTVGGGVDFAMTDNVLLRAEYRYSDFGKKAFVK-------DEDKIAYKTNDFRV 282
Query: 237 GINMHF 242
G+ F
Sbjct: 283 GVAYKF 288
>gi|159044248|ref|YP_001533042.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12]
gi|157912008|gb|ABV93441.1| hypothetical protein Dshi_1699 [Dinoroseobacter shibae DFL 12]
Length = 198
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 29/179 (16%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G YVG I D + G+ G++ +V G
Sbjct: 49 DWTGGYVGAQIGY-------GDVGTNASGVDGDGLIGGLIAGYDYDFGSYVLGAGIDYDI 101
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
A D L++ + L+AG+ LIY GG+ A + +
Sbjct: 102 ADIDLGPASLEDVL----RLKLRAGFEAGPSLIYATGGYARAGTDNLGSDD--------- 148
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G++Y ++ ++SL+ Y + + + +
Sbjct: 149 ---------GWFAGAGVEYPLSQNLSLAGEVLYHEFDDFDGSGVDVDATTVQARLAYRF 198
>gi|49474419|ref|YP_032461.1| hemin binding protein E [Bartonella quintana str. Toulouse]
gi|21689909|gb|AAM68132.1| hemin-binding protein E [Bartonella quintana]
gi|49239923|emb|CAF26323.1| Hemin binding protein E [Bartonella quintana str. Toulouse]
Length = 299
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 8/130 (6%)
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
A+++S K G ++ G+ V+ ++ Y GG D + +++
Sbjct: 178 AEENSLTVSHTLKQKWTGATRVRVGFPVERMMPYISGGVAYGQFQDIFSMSITGEDADFT 237
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
LG G+D+ + + A YRY ER++ +
Sbjct: 238 TVDDTKAMIGYTLGGGVDFAMTDHFIVRAEYRYSDFGKKKFQ--------ERIELNYKTN 289
Query: 233 IASLGINMHF 242
+G+ F
Sbjct: 290 DFRVGVAYKF 299
>gi|220924333|ref|YP_002499635.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060]
gi|219948940|gb|ACL59332.1| PE-PGRS family protein [Methylobacterium nodulans ORS 2060]
Length = 494
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 57/205 (27%), Gaps = 57/205 (27%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL------------------------ 89
W+G YVG H+ L+ T P G
Sbjct: 266 WAGAYVGGHLGALHTL--SGRTFGSTALAGGEPGGAGQRGIDGGGGGGGAVAFAGLARSP 323
Query: 90 ----GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
G LG+N Q V+G + + DS Y G + + G+S + L+
Sbjct: 324 AILGGAHLGYNWQNAALVYGAEGDVSVSAADSHRY--------LGTIRGRLGWSGGATLV 375
Query: 146 YGMGGFGGA-------------------YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
Y G A + ++ + R + V+G
Sbjct: 376 YATAGVAFAGNESVRAVFAGNGGAGGNGGAVLAAPGGAGGAGGQALAFRANDTEIGFVVG 435
Query: 187 IGLDYMVNYDISLSASYRYIPHHIH 211
GL+ ++ +S A Y
Sbjct: 436 GGLEARLSERVSAGAEALYYGLSSR 460
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 36/120 (30%), Gaps = 29/120 (24%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--------------------GIE 92
WSG YVG H+ + ++ + G+
Sbjct: 40 DWSGFYVGSHLGGVVSGRGERRVVSGDGGGLIPAGFGGRGGRTGIAIGRIEGRTVFQGVH 99
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+N Q V GI + + G V + G+ D LLIYG GG
Sbjct: 100 AGYNWQQGSAVAGIEADLASLGPVD---------DLLGSVRGRLGFGSDRLLIYGTGGLA 150
>gi|319406584|emb|CBI80226.1| Hemin binding protein C [Bartonella sp. 1-1C]
Length = 304
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/318 (14%), Positives = 92/318 (28%), Gaps = 94/318 (29%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHI 63
N L ++++ + + A D+ +P++I W+G Y+G I
Sbjct: 2 NNMKCLITASVVALMTASAAQAADIKVPQEIGE--------TIVVAPAFSWTGFYLGGQI 53
Query: 64 SRLYETHPLADTINRKTYN--------SLLPNGL--GIELGHNIQLED-FVFGINCHT-- 110
+ + + S P+G G G N+ L + + G++
Sbjct: 54 GGFSSKTSFSSLADGDSKKWFPLDKKLSPKPSGFIGGFYAGSNVDLGNGLILGVDTDVVF 113
Query: 111 ------------------------TAAKD--------------------------DSTFY 120
T AKD D F
Sbjct: 114 SGRKDTRNDTMTSELGKDKNNNVPTGAKDNGNPKPEKEPGKEPGKEPEKEPEKESDVKFT 173
Query: 121 RL--KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS-------------SLEKVE 165
+ K G ++ G++ D ++ Y GG + D+ + +
Sbjct: 174 KYDHTLKAKWAGATRVRIGFAADRIMPYVAGGVAYTQLQDTFTTLTGIQKIPVQKADGKD 233
Query: 166 SDNSKNAKG-RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ S + L G+D+ + ++ L A YRY ++N + +
Sbjct: 234 EETSGKSNTVDESKTMIGYTLAAGVDFAMTDNVLLRAEYRYSDFGKKKLHNDKFEVN--- 290
Query: 225 VDRKGNAHIASLGINMHF 242
A+ +G+ F
Sbjct: 291 ----YKANDFRVGVAYKF 304
>gi|312115598|ref|YP_004013194.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC
17100]
gi|311220727|gb|ADP72095.1| hypothetical protein Rvan_2889 [Rhodomicrobium vannielii ATCC
17100]
Length = 249
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 25/202 (12%)
Query: 54 WSGNYVGLHISRLYETHPL-------ADTINRKTYNSLLPNGL--GIELGHNIQLEDFVF 104
W+G Y+GL + H L D N + G+ +E+G++ Q + V
Sbjct: 44 WTGFYIGLGVGGQAVNHELSASDFDAGDEEWIGDLNGVSGTGVIGTVEVGYDRQFGNIVA 103
Query: 105 GINCHTTAAKDDSTFYR-----LKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVID 158
G+ + D S+ R + K + GY V+ L Y +GG
Sbjct: 104 GVFFNYDFGDDVSSSLRIEDLNVNAKQTDSWTAGGRLGYLVNPGTLAYVLGG-------- 155
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
+ + G D + +G GL+ ++ + L YR+ + +
Sbjct: 156 --YTQSTFELGFPGFGSADDTFAGWTVGGGLETRLSGNWYLKGEYRFTEFDTNRYTLVDE 213
Query: 219 KSDVERVDRKGNAHIASLGINM 240
D + L ++
Sbjct: 214 DGDGIGASVDTSVQTVRLVLSY 235
>gi|319408966|emb|CBI82625.1| Hemin binding protein E [Bartonella schoenbuchensis R1]
Length = 303
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 9/137 (6%)
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV--IDSSLEKVE 165
A+ ++ G ++ G++ D ++ Y GG I S
Sbjct: 174 IDIEEAEKTIITFKYTLNQKWTGATRIRIGFAADRIMPYIAGGVAYGQFQNILSLSSTAT 233
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D N G G+D+ + DI L A YRY +
Sbjct: 234 HDKELNNMSDETKTMIGYTFGAGIDFAMTDDIILRAEYRYSDFGKKKFAKDSF------- 286
Query: 226 DRKGNAHIASLGINMHF 242
+ + G++ F
Sbjct: 287 ELHYKTNDFRAGVSYKF 303
>gi|254503257|ref|ZP_05115408.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
gi|222439328|gb|EEE46007.1| OmpA-like transmembrane domain, putative [Labrenzia alexandrii
DFL-11]
Length = 184
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 26/203 (12%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
IW+G Y+G + +K Y+ G+ G+N ++ + G+
Sbjct: 1 MAPAGSIWAGPYLGFEAGGSQTVTEVKAGGQKKDYSRFDA-AFGVFGGYNWEVSRVILGV 59
Query: 107 NCHTTAAKDDSTF-----YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
T D ++ + G +++ + Y G
Sbjct: 60 EGAATYIGDTKKGQHPVLGTIETGSKWSVTAKTRVGLPINNFMPYVSLGVA--------- 110
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ K G VLG G++ ++ + L A Y ++ K
Sbjct: 111 --ATDHSLKANGRTESSVGLGAVLGAGVEVAMHDNWRLRADY-------TLTGIADTKDT 161
Query: 222 VERVDRKGNA--HIASLGINMHF 242
K A H LGI+ F
Sbjct: 162 FAGTQAKRTAGNHRLMLGISRAF 184
>gi|260426559|ref|ZP_05780538.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260421051|gb|EEX14302.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 199
Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 39/216 (18%)
Query: 29 YLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG 88
P ++ A G W+G VG + + + +S
Sbjct: 21 LEPTPVEPAPVAPLAPVA-SPVTGDWTGPSVGAQLGYG------SVDTDGAGDDSEDGMV 73
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV--LKAGYSVDSLLIY 146
G+ ++ ++V G + D+T L + + G + GY + ++Y
Sbjct: 74 YGLRAFYDHDFGNWVAG-----AGVQYDATDIDLGDAGDLDGIARVGGRVGYDLGRTMVY 128
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G GG+ A SL+ G +G G++ V+ +++L+ Y
Sbjct: 129 GTGGYAHATTDGGSLD--------------AGSSGGYYVGAGVETFVSDNVTLNGEVNYN 174
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ D + A A++GIN F
Sbjct: 175 EFSDFDDD-----------DLEVGATTATVGINYRF 199
>gi|240849918|ref|YP_002971307.1| hemin binding protein B [Bartonella grahamii as4aup]
gi|240267041|gb|ACS50629.1| hemin binding protein B [Bartonella grahamii as4aup]
Length = 582
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 18/154 (11%)
Query: 100 EDFVFGINCHTTAA-------KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
V+GI A +D+ K G ++ G++ D + Y GG
Sbjct: 436 NSSVYGIEQMKRVASELGLDQEDEVETLNHTFKQNWGGATRVRIGFAADRFMPYLAGGIA 495
Query: 153 GAYVIDSSLEKVESDN----SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
D+ V+ ++ S LG G+D+ V ++ + A YRY
Sbjct: 496 YGQFQDTISISVKDEDGRVVSSKNLADETKTMIGYTLGGGVDFSVLDNVIVRAEYRYSDF 555
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + +G+ F
Sbjct: 556 GKKKFAKEKFEVN-------YKTNDFRVGVAYKF 582
>gi|294677984|ref|YP_003578599.1| hypothetical protein RCAP_rcc02462 [Rhodobacter capsulatus SB 1003]
gi|294476804|gb|ADE86192.1| membrane protein, putative [Rhodobacter capsulatus SB 1003]
Length = 209
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 59/187 (31%), Gaps = 19/187 (10%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGI--WSGNYVGLHISRLYETHPLADT 75
+V SLA E++ V + W G Y G+ +
Sbjct: 8 IVAMASLAAPALAGGLTPPVVESEPTVAATPAPAPVQAWDGFYAGITGGSVTGGGASYAP 67
Query: 76 INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLK 135
G+ G+N+Q V+G A + K I D+ +
Sbjct: 68 GGAAFGMGRGSY--GVFGGYNLQSGALVYGGEIAAQATDFNLDGAPGKFDNMI--DLKAR 123
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
AG + L Y G+ + KN G+ +G + G+G+DY VN
Sbjct: 124 AGMAYGKALPYAFVGYS-------------RGDWKNGDGQTNGAADGMNYGLGVDYAVND 170
Query: 196 DISLSAS 202
S+ A
Sbjct: 171 KWSVGAE 177
>gi|188582112|ref|YP_001925557.1| porin [Methylobacterium populi BJ001]
gi|179345610|gb|ACB81022.1| porin [Methylobacterium populi BJ001]
Length = 285
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 51/180 (28%), Gaps = 33/180 (18%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLP----------------NGLGIEL 93
W+G Y GLH + +P T + + + +G
Sbjct: 37 PVFTWTGFYAGLHTGYAFTDNPNIQTRGNDAFTATNVQLARRPASLKSEVDGFSRIGGGF 96
Query: 94 GHNIQLED---FVFGINCHTTAAKDDSTFY-------------RLKEKYFIYGDVVLKAG 137
G+N Q FV G+ T D + G V K G
Sbjct: 97 GYNYQFTPGSGFVAGLAFDATWLDLDKRIGFYGTPNPVVGNASVYTQDLDFLGTVNGKLG 156
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYMVNYD 196
Y+ D +YG GG +V + G + G G++Y + D
Sbjct: 157 YAFDRFFVYGTGGLAFGHVSYGADFFNPGATVLQYTGGGRKIFETGYNYGGGIEYAITPD 216
>gi|3426106|emb|CAA07721.1| hypothetical protein [Rhizobium leguminosarum]
Length = 139
Score = 61.7 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 43/128 (33%), Gaps = 12/128 (9%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEY----QDDEYGIWSGNYVGLHISRLYETHPLADTINR 78
+LA + + + Y Q WSG Y+GL +
Sbjct: 7 ALAAVAFSAVPAFAADAVVQDPAYVQQGQTQSAFDWSGFYLGLQGGYT----STHASYLD 62
Query: 79 KTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+ L GI G+N Q FVFGI D + LK G + GY
Sbjct: 63 GSEQDLDGGSTGIYGGYNFQHGPFVFGIENDFNYNWKDGSDVSLK----WDGSARGRVGY 118
Query: 139 SVDSLLIY 146
++D LIY
Sbjct: 119 ALDRTLIY 126
>gi|319898546|ref|YP_004158639.1| Hemin binding protein B [Bartonella clarridgeiae 73]
gi|319402510|emb|CBI76053.1| putative Hemin binding protein B [Bartonella clarridgeiae 73]
Length = 609
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 11/127 (8%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR-FD 177
Y K G ++ G + + Y GG + + + ++ +N FD
Sbjct: 491 TYTHNLKQKWSGATRIRLGLAAGRFMPYIAGGVAYTKIQGTFSKLIKEIGKENTSSNLFD 550
Query: 178 GHGS--SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ L G D+ + + + + YRY N+K +
Sbjct: 551 SVETMIGYTLSGGFDFAMTDRVLIRSEYRYSDFGEKKFKKINSKY--------YKINDVR 602
Query: 236 LGINMHF 242
+G+ F
Sbjct: 603 IGLAYKF 609
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 12/125 (9%)
Query: 13 VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR------- 65
+ +V + L + ++ Y W G Y+G I
Sbjct: 1 MITKYLVTISVFSFILASRVQGADIINHQDSRSIVAPVYS-WKGFYLGGQIGGFSGLTTF 59
Query: 66 ---LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTFYR 121
Y+ ++I+ + + G G N + F+ G++ + T
Sbjct: 60 NYHKYDNIEKWNSIDEDLSSEIFGFTGGFYAGSNFDFGNGFILGVDTDIVFSNKKDTKVF 119
Query: 122 LKEKY 126
+K K+
Sbjct: 120 VKNKF 124
>gi|296282661|ref|ZP_06860659.1| outer membrane protein-like [Citromicrobium bathyomarinum JL354]
Length = 222
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 78/207 (37%), Gaps = 18/207 (8%)
Query: 47 QDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVF 104
Q D +SG + T + + N G+ G +G+++ L + V
Sbjct: 23 QVDPDSPFSGFRIQGTTGYDQITAGSSVDDDGNDNNDQSAEGVIYGATIGYDVDLGNIVI 82
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVL--------KAGYSVD-SLLIYGMGGFGGAY 155
G T + D+ + + F +G+V + G + +++ Y GG+ A
Sbjct: 83 GPEAELTGSTADTDYENGDFEGFGFGNVSAGRDVYVGARIGVKANPNMMFYAKGGYTNAK 142
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
+ S N + D +G GL+Y ++ + YRY + +V+
Sbjct: 143 LNVRS-------NDGTTEFDTDYDLDGYRVGGGLEYAFGKNMFTNIEYRYSNYSDANVDF 195
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ D ++ D + H ++G+ + F
Sbjct: 196 NGTLPDTDQFDVDTDRHQVTVGLGVRF 222
>gi|240850342|ref|YP_002971735.1| hemin binding protein E [Bartonella grahamii as4aup]
gi|240267465|gb|ACS51053.1| hemin binding protein E [Bartonella grahamii as4aup]
Length = 330
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 8/131 (6%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A DS + K G ++ G+S ++ Y GG D + N
Sbjct: 208 AEDKDSLTFNHTLKQKWTGATRVRVGFSAGRVMPYIAGGVAYGQFQDILSTVITGGEPFN 267
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
LG G+D+ + + + A YRY K ++E + +
Sbjct: 268 RTSDATKTMIGYTLGGGVDFAMTDHLVVRAEYRYSDF-----GKKKFKDEIEVKYKTNDF 322
Query: 232 HIASLGINMHF 242
GI F
Sbjct: 323 ---RAGIAYKF 330
>gi|254470997|ref|ZP_05084400.1| outer membrane protein [Pseudovibrio sp. JE062]
gi|211960139|gb|EEA95336.1| outer membrane protein [Pseudovibrio sp. JE062]
Length = 201
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 67/195 (34%), Gaps = 23/195 (11%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W G Y+GL + DT+ K L +G G+N + V G+
Sbjct: 26 GKWDGFYLGLKGG--FGQLTGKDTLGSKGT--LDSGVVGAFGGYNHSFDRIVVGVEADLN 81
Query: 112 AAK----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
A DS R + K+ ++ GY L Y G G A +
Sbjct: 82 ATNYTSVSDSGVSRSRSKWNT--SATVRLGYDAGMFLPYLSAGVGLAEYEVKRFADGQKS 139
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ + +V+G GL+ M+ ++S Y+++ +
Sbjct: 140 ENTH---------IGLVVGAGLEAMITENVSARLDYKHMEMSKEKYKFQGFNA----FHI 186
Query: 228 KGNAHIASLGINMHF 242
+G + +LG+ +F
Sbjct: 187 EGRQDLVTLGVAYNF 201
>gi|217979538|ref|YP_002363685.1| putative outer-membrane immunogenic protein precursor [Methylocella
silvestris BL2]
gi|217504914|gb|ACK52323.1| putative outer-membrane immunogenic protein precursor [Methylocella
silvestris BL2]
Length = 200
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 21/160 (13%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
Y W+G Y G++I ++ + + G ++G+N QL F
Sbjct: 39 PLYTPPPEFSWTGFYAGVNIGGGLSAENAFNSFSGINASRAGGVVGGGQVGYNYQLTPLF 98
Query: 103 VFGINCHTTAAKDDSTFYRLKE---KYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVI 157
V GI + ++ +G +AG++V LL+YG GG V
Sbjct: 99 VVGIENEFLGSSISTSNNDWNRPHVTVPFFGTARGRAGFTVFDPHLLVYGTGGLAFGQVN 158
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
D+ + K+ G G + +
Sbjct: 159 DAGINKL---------------RIGWTAGSGFGMGFSAQL 183
>gi|254437354|ref|ZP_05050848.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307]
gi|198252800|gb|EDY77114.1| hypothetical protein OA307_2224 [Octadecabacter antarcticus 307]
Length = 197
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 48/180 (26%), Gaps = 26/180 (14%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
W+G YVG + + + GI G++ +FV G +
Sbjct: 44 TDWTGFYVGGSLGYAEGSEDDSTVFEDDGAT------YGIHAGYDYDFGNFVLGAELELS 97
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
L+AGY + L Y G +
Sbjct: 98 GFDVSDGG----NDIDSVSRAKLRAGYDAGAFLPYLTVGVASLDIG-------------- 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G D + + G+G+DYM+N I L + ++ V
Sbjct: 140 --GGLDANDTGSFYGVGMDYMLNDRIRLGGEVLQHEFGNFDNTGLDFEATTASVRVAFQF 197
>gi|170745396|ref|YP_001766853.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
gi|170658997|gb|ACB28051.1| putative outer membrane protein [Methylobacterium radiotolerans JCM
2831]
Length = 577
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 61/239 (25%), Gaps = 42/239 (17%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--------------GI 91
Y W+G Y GL + P G
Sbjct: 31 YPVPPIFSWTGAYAGLFTGYGSLDSNTKFICTAPGRQAGAPECPILPSRRASDASFIGGG 90
Query: 92 ELGHNIQLED---------------FVFG-INCHTTAAKDDSTFYRLKEKY---FIYGDV 132
E+G+N Q + +G F +
Sbjct: 91 EVGYNWQTPSGLVAGAAADYQFTRLWGYGRQEGDFKTVDGSVFFDSVAHSGQRLDDLATF 150
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG----SSVVLGIG 188
K G+SVD IY GG +V + + FDG G V G+G
Sbjct: 151 RGKIGFSVDQTFIYVTGGLAVGHVRIDNNLNLSIKPDAAPAAAFDGRGGAVRLGYVAGMG 210
Query: 189 LDYMVNYDISLSASYRYIPHHIHSV-----NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ + +S Y +V + + +A +G+N F
Sbjct: 211 IEHAFSERLSAKVEGLYYNLGSRAVVPDQTSGGELPGYRAGTRIATDGFLARVGLNYRF 269
>gi|170749946|ref|YP_001756206.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656468|gb|ACB25523.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 245
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 67/211 (31%), Gaps = 26/211 (12%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED---FVF 104
W+G Y G++ + T T G ++G+N Q V
Sbjct: 41 FTWTGFYAGVNAGYAFPTGSGGFTDPTYGTVTGGGRSGGFAGGGQVGYNYQFTPGSGVVV 100
Query: 105 GINCHTTA---AKDDSTF------YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
G+ AK D+ + Y ++ +G V + GY+ D +L+YG GGF
Sbjct: 101 GVETDIQGTAFAKADAAYLGTAPYYSVRPSLDYFGTVRARLGYAFDRVLVYGTGGFAYGG 160
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
S+ + + G G++Y +S Y+ +
Sbjct: 161 GARSTY------AASYPYTLPSTDRTGYAAGGGIEYAFTEKLSAKVEALYLHLGRGTTAA 214
Query: 216 SNAKSDVERVDRKGN----AHIASLGINMHF 242
+ + V G + G+N F
Sbjct: 215 TYYNASVPAFYGAGKQDSGLALVRAGVNYRF 245
>gi|319407469|emb|CBI81119.1| Hemin binding protein d [Bartonella sp. 1-1C]
Length = 270
Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 70/239 (29%), Gaps = 54/239 (22%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINR--------KTYNSLLPNGL--GIELGHNIQLE 100
W G Y G I + + +S +G+ G+ G +I +
Sbjct: 39 AFSWQGFYFGARIGGFSGPITSSIMDENNVERNIIFQDQSSPKLSGVVGGLYAGLDINIH 98
Query: 101 D-FVFGINCHTTAAKDDST------------------------FYRLKEKYFIYGDVVLK 135
+ FV G + + + T + + + +
Sbjct: 99 NIFVVGCDTNVDWSGVKDTKVIDVIASLQADLKYGNGGGEVDFGIKQSLQQKWLSAIRWR 158
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD------------GHGSSV 183
G+S D ++ Y GG + + + + + N+ ++
Sbjct: 159 VGFSFDRVMPYVAGGVSLSQFRSTYSKFLVASNNNSSIRSLSEKPLPVSSTSNVNTMVGY 218
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G GLD+ + + L A Y Y + NS ++ ++ G+ F
Sbjct: 219 TIGGGLDFAITDNFILRAEYNYSDFGRKELVNS-------KIKFSYKSNAFYFGLAYKF 270
>gi|319899124|ref|YP_004159217.1| Hemin binding protein d [Bartonella clarridgeiae 73]
gi|319403088|emb|CBI76643.1| Hemin binding protein d [Bartonella clarridgeiae 73]
Length = 303
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/306 (14%), Positives = 83/306 (27%), Gaps = 93/306 (30%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
+++ + + A D +P + + W+G Y G H+ +
Sbjct: 11 LLLVSEAQAADFVIPYQSSTI------PTVISPPHFSWTGIYFGGHVGGFEGPSTSYMST 64
Query: 77 NRK-----TYNSLLPNGLGIELGH--------------------NIQ---------LEDF 102
+ N+ P G+ G N ++ F
Sbjct: 65 QGERQKLLFKNNPSPKFSGVIGGLYAGASFDVNNGLVLGFDTDINWSGAKDEKSVDMDSF 124
Query: 103 VFGINCHTTAAKDDSTFYRL--------------KEKYFIYGDVVLKAGYSVDSLLIYGM 148
V + + D+ ++ K G ++ G+ D ++ Y
Sbjct: 125 VMALRKMDNVSNKDNVSNKIFPGFSLEQFISLKQTLKQKWVGATRVRIGFGFDRIMPYVA 184
Query: 149 GGFGGAYVIDSSL-EKVESDNSKNAKGRFDGHG--------------------------- 180
GG ++ D + E V + K +
Sbjct: 185 GGVAYTHLKDVYVMETVTQETLKTGIRQSSQSSQSSQSSQSSQSSQSSQSSQLDFSMESE 244
Query: 181 ----SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+G GLD V ++ L A YRY NN ER K ++ S+
Sbjct: 245 KKTMIGFTIGGGLDLAVTDNLILRAEYRYSDF-----NNKEFTK--ERFTIKYKSNGFSV 297
Query: 237 GINMHF 242
G+ F
Sbjct: 298 GVAYKF 303
>gi|49475068|ref|YP_033109.1| hemin binding protein b [Bartonella henselae str. Houston-1]
gi|49237873|emb|CAF27069.1| Hemin binding protein b [Bartonella henselae str. Houston-1]
Length = 391
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 17/185 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
H S + T +A + T + N GI ++ E + G++ + T
Sbjct: 220 HASNPHGTQNMAGRTTQSTKVA-EKNASGIYGIEQVKKEAYEHGLSQYGNVETLSHTL-- 276
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN----SKNAKGRFD 177
K G ++ G+SVD ++ Y GG A + D+ ++ ++ +
Sbjct: 277 ---KQNWAGATRVRVGFSVDRVMPYFAGGIAYAQLHDTISISIKKNDESVVTSKNLTDEK 333
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
LG G+D+ + ++ L A YRY K E+++ + +G
Sbjct: 334 KTMIGYTLGGGVDFAMTDNVLLRAEYRYSDFGKK-------KFAKEKLEINYKTNDFRVG 386
Query: 238 INMHF 242
+ F
Sbjct: 387 VAYKF 391
>gi|159042840|ref|YP_001531634.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12]
gi|157910600|gb|ABV92033.1| putative outer membrane protein [Dinoroseobacter shibae DFL 12]
Length = 216
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 18/170 (10%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTI----NRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
W+G Y+G + Y + I N + L G ++G + V
Sbjct: 52 PAPFWAGGYIGAQLGYAYGDFDIDAAIDGDDNDDGFIGGLTAGYLFDVGSGWYVGPEVQY 111
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+D + + L G + + L+YG G +
Sbjct: 112 DWADLEITEDGGD----TASFDEIARLKLIVGREIGNGLLYGTAGIAYGSL--------- 158
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
D++ + DG ++ +LG+G DY V + ++ Y Y +N
Sbjct: 159 -DSAGDVFDGIDGSDTNWLLGLGYDYRVGDNWTVGGEYMYHSFDDVDLNT 207
>gi|170747833|ref|YP_001754093.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654355|gb|ACB23410.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 276
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 65/240 (27%), Gaps = 59/240 (24%)
Query: 54 WSGNYVGLHISRLYETHPLADT------INRKTYNSL------LPNGLGIELGHNIQLED 101
W+G Y G++ ++ + G ++G+N Q
Sbjct: 42 WTGAYFGINAGYAFDASSNNTNSFGVPAPYGNGTTAFFSQRNQEGFTGGGQVGYNFQFTP 101
Query: 102 ---FVFGINCHTTAAKDDSTFY-----------------RLKEKYFIYGDVVLKAGYSVD 141
V G+ + R +G V + GY+ D
Sbjct: 102 GSGIVVGVEADAQYLDFGRSRNNAFLVGPLAPGYYVTDPRGLSSLDFFGTVRGRIGYAFD 161
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-------- 193
+L YG GGF +D S D + +G G++Y +
Sbjct: 162 RVLFYGTGGFAYGSG--------SADRSFGGFAGNDSFRTGYAVGGGIEYALPTDSFLNF 213
Query: 194 --NYDISLSASYRYIPHHIHSVNNSNAKSDVERV---------DRKGNAHIASLGINMHF 242
+ ++L Y+ ++ N + R + G+N F
Sbjct: 214 FRSNAVTLKVEGLYVNLDRNTRNQGAFVINAANNFPVVYNNIGRRDDEFAVIRAGLNYKF 273
>gi|49473905|ref|YP_031947.1| hemin binding protein b [Bartonella quintana str. Toulouse]
gi|21689905|gb|AAM68130.1| hemin-binding protein B [Bartonella quintana]
gi|49239408|emb|CAF25746.1| Hemin binding protein b [Bartonella quintana str. Toulouse]
Length = 453
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 22/153 (14%)
Query: 103 VFGIN---------CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
V+GI + ++ + LK+ G L+ G++ D ++ Y GG
Sbjct: 310 VYGIEEVKKVAASLGVDQGGRAETLTHTLKQN--WAGATRLRIGFAADRIMPYVAGGIAY 367
Query: 154 AYVID----SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ D S E+ S+ LG G+D+ + ++ L A YRY
Sbjct: 368 TQLQDIVSISLKEQDGEAVSRKNLTNETKTMIGYTLGGGIDFAMTDNVLLRAEYRYSGFG 427
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
AK +E + + +G+ F
Sbjct: 428 KK----KFAKEKLEVNYKTNDF---RIGVAYKF 453
>gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 326
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 48/224 (21%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
+A+ LP + NN Y+G + T
Sbjct: 8 IAICPLLPFFLQAAENNTNN-------------FYIGAKAGWSKYQDAC---LYGYTKCE 51
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE----KYFIYGDVVLKAGYS 139
G G+ +G++ D+ F I + + I D+ K GY
Sbjct: 52 EDSLGYGLFVGYD--FTDW-FAIEG--GVTNHNEVNSSYQNYDVEALAISSDLSTKFGYR 106
Query: 140 V-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ D++ +Y G ++ + + G F G ++ +G+DY ++ + S
Sbjct: 107 LTDNVQLYTKVGISYQHINKTMSDL----------GDFSGSSFGGLVAMGIDYKLDNNWS 156
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L Y++I K + H S+GI F
Sbjct: 157 LRGEYQFIDGIGDD------------TSLKADLHFTSVGIKYRF 188
>gi|156739520|gb|ABU93420.1| Omp25 [Brucella canis]
gi|156739522|gb|ABU93421.1| Omp25 [Brucella canis]
Length = 128
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 15/142 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y GL++ + + G G N Q + V+G+ +
Sbjct: 1 GGYTGLYLGYGWNKAKTSTV----GSIKPDDWKAGAFAGWNFQKDQIVYGVEGDAGYSWA 56
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 KKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDD 105
Query: 176 FDGHGSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 ESKFRVGWTAGAGLEAKLTDNI 127
>gi|156739530|gb|ABU93425.1| Omp25 [Brucella suis]
gi|156739540|gb|ABU93430.1| Omp25 [Brucella abortus]
gi|156739558|gb|ABU93439.1| Omp25 [Brucella melitensis]
gi|156739590|gb|ABU93455.1| Omp25 [Brucella suis]
gi|156739594|gb|ABU93457.1| Omp25 [Brucella suis]
gi|156739614|gb|ABU93467.1| Omp25 [Brucella melitensis]
gi|156739630|gb|ABU93475.1| Omp25 [Brucella suis]
Length = 128
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 15/142 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y GL++ + + G G N Q + V+G+ +
Sbjct: 1 GGYTGLYLGYGWNKAKTSTV----GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWA 56
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 KKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDD 105
Query: 176 FDGHGSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 ESKFRVGWTAGAGLEAKLTDNI 127
>gi|170742457|ref|YP_001771112.1| porin [Methylobacterium sp. 4-46]
gi|168196731|gb|ACA18678.1| porin [Methylobacterium sp. 4-46]
Length = 294
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 72/261 (27%), Gaps = 82/261 (31%)
Query: 54 WSGNYVGLHISRLYETHPLADTI--NRKTYNSLLPNGL-----------------GIELG 94
W+G Y G + + T ++ L+P G G ++G
Sbjct: 41 WTGFYAGFNAGYGFGTSDNNNSTLIGVNAATGLVPPGTTAVLGFRNRDNNDGFVGGGQVG 100
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLK----------------------EKYFIY 129
+N Q FV GI A R +
Sbjct: 101 YNYQFTPGAGFVIGIEADAQYADFGRERNRFSLVTNNPAVTGLAAQQVFNPNGLSGLDYF 160
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ D L+Y GGF +S D + +G G+
Sbjct: 161 GTVRGRLGYAFDRTLVYATGGFAYGGGGGTSF----------GLPNRDDFQTGWTVGGGV 210
Query: 190 DYMV----------NYDISLSASYRYIP-------HHIHSVNNSNAKSDVER-------- 224
+Y + + ++L Y+ + +VNN+ V
Sbjct: 211 EYALPTDSFLNFFKSNAVTLKVEGLYVNLDRGNGLNGAFAVNNAGTLITVTSPGVVLVPG 270
Query: 225 ---VDRKGNAHIASLGINMHF 242
V R + G+N F
Sbjct: 271 SGLVRRDTEFAVVRAGLNYKF 291
>gi|310816178|ref|YP_003964142.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308754913|gb|ADO42842.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 202
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 75/232 (32%), Gaps = 33/232 (14%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
+V + +V + + A L A V W+G Y G ++
Sbjct: 4 LIVATTALVASATFAQAGGLAAPTIEAPVAAPVVIAAPAPVTTWAGAYAGAALTYGETEG 63
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
+ T S+ G+ + G++ Q +V G+ +D + +
Sbjct: 64 SVG-----GTSESIDGVGVALRGGYDWQFGSWVLGLGAEYAYNNEDGDVFGATAERKDSA 118
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
V +AGY++D+ L Y G+ + + G+G++
Sbjct: 119 AVFARAGYALDTWLPYVSAGYTWSDAEVAGT---------------SYDLEGATYGVGVE 163
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +IS A Y + DV+ V +G LG+N F
Sbjct: 164 KLFTQNISGFAEYSFADF-----------DDVQGVSVEGQG--VKLGVNYRF 202
>gi|170747711|ref|YP_001753971.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170654233|gb|ACB23288.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/253 (15%), Positives = 67/253 (26%), Gaps = 72/253 (28%)
Query: 54 WSGNYVGLHISRLY---------ETHPLADTINRKTY---------NSLLPNGLGIELGH 95
W+G YVG++ + P IN N+ G ++G+
Sbjct: 41 WTGFYVGVNAGYGFDANSRNTTSYALPGGSLINSPGTAGVVSVSNRNNNDGFSGGAQIGY 100
Query: 96 NIQLED---FVFGINCH-----------------------TTAAKDDSTFYRLKEKYFIY 129
N Q V G + + +
Sbjct: 101 NYQFTPGSGVVIGFEADAQYVDFARRANATQNYSFLGFPGVAFSNPPAFVATSGNGLDYF 160
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ D L+YG GGF + D + D + G G+
Sbjct: 161 GTVRGRLGYAFDRTLVYGTGGFAYGSG--------QDDQNFAGNRFRDSFRTGWAAGGGV 212
Query: 190 DYMV----------NYDISLSASYRYIPHHIHSVNNS----------NAKSDVERVDRKG 229
+Y + + ++L Y+ + N + + K
Sbjct: 213 EYALPTDSFLNFFRSSAVTLKVEGLYVSLDRQKNSAGGVFYGNLLPPNGIAYLNGAAAKT 272
Query: 230 NAHIASLGINMHF 242
+ G+N F
Sbjct: 273 EFAVVRAGLNYKF 285
>gi|156739524|gb|ABU93422.1| Omp25 [Brucella neotomae]
Length = 128
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 15/142 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y GL++ + + G G N Q + V+G+ +
Sbjct: 1 GGYTGLYLGYGWNKAKTSTV----GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWA 56
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 KKSKDGLEVKQGFEGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDD 105
Query: 176 FDGHGSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 ESKFRVGWTAGAGLEAKLTDNI 127
>gi|319898376|ref|YP_004158469.1| Hemin binding protein E [Bartonella clarridgeiae 73]
gi|319402340|emb|CBI75879.1| Hemin binding protein E [Bartonella clarridgeiae 73]
Length = 299
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ LKEK G ++ G++ D ++ Y GG + D+ + ++ +K + +
Sbjct: 188 NHSLKEK--WTGATRVRIGFAADRIMPYVAGGISYVELQDTLSVVIGTEENKADESK--- 242
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G G+D+ + I + YRY K E VD + +G+
Sbjct: 243 TMIGYTFGGGVDFALTNSIIVRTEYRYSDFGKK-------KFAKEEVDLSYKTNNFRVGV 295
Query: 239 NMHF 242
F
Sbjct: 296 AYKF 299
>gi|170750246|ref|YP_001756506.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656768|gb|ACB25823.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 287
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 67/244 (27%), Gaps = 56/244 (22%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPN----------------GLGIELGHNI 97
W+G Y GL + + T+ + N+ +G G+N
Sbjct: 42 WTGFYAGLESAYTFTDRERITTVGVQPGNATNVALGRRPFATSTTQDGFANIGGTAGYNY 101
Query: 98 QLED---FVFGIN---------------CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS 139
Q V GI A + ++ G + + GY+
Sbjct: 102 QFTPGAGIVVGIANSIDWTDITKNRVVLGTGNVAGGPPNISQFRQSLDWLGTLTGRVGYA 161
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV------ 193
D +L+YGMGG V + GR+D + G G+++ +
Sbjct: 162 FDRVLVYGMGGLAYGNVFHDA-NFYTPGGRLQFAGRYDDFKTGFAYGGGIEFALPTDSFL 220
Query: 194 ------------NYDISLSASYRYIPHHIHSVNNSNAKSDVERV---DRKGNAHIASLGI 238
I++ A Y + +V + I G
Sbjct: 221 NTFALGRYIGIKYDAITVKAEYLHYDLGSQNVLVGAVPGVGNGAYISRFRTEGSIVRAGF 280
Query: 239 NMHF 242
N F
Sbjct: 281 NYKF 284
>gi|83942577|ref|ZP_00955038.1| outer membrane protein, putative [Sulfitobacter sp. EE-36]
gi|83846670|gb|EAP84546.1| outer membrane protein, putative [Sulfitobacter sp. EE-36]
Length = 202
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 50/183 (27%), Gaps = 30/183 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y GL + + +Y G G+N FV G
Sbjct: 47 GDWTGFYTGLQLGYSDAEVDNGLEGDNGSY--------GFHAGYNYDFGRFVLGGELDYD 98
Query: 112 AAKDD--STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D + +K GY + S LIY GG+ A
Sbjct: 99 KTDIDLDDAAGVTQGSIDSVARAKIKGGYDLGSTLIYATGGYARADTSL----------- 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-HSVNNSNAKSDVERVDRK 228
G GIG+DY + S+ A + V+ +A +
Sbjct: 148 --------GDEDGAFYGIGMDYKITEQYSVGAELLEHKFDDVNGVSGDDADVTTFNIRGS 199
Query: 229 GNA 231
Sbjct: 200 YRF 202
>gi|325919158|ref|ZP_08181215.1| opacity protein [Xanthomonas gardneri ATCC 19865]
gi|325550365|gb|EGD21162.1| opacity protein [Xanthomonas gardneri ATCC 19865]
Length = 279
Score = 59.4 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 41/221 (18%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG----------LGIELGHNIQLEDFVFG---- 105
G +S + P G LG++ Q ++V+G
Sbjct: 62 GDQVSTATGADAFSPGFCGGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAE 121
Query: 106 -----INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVI 157
+ +A FY + + + GY+ L Y G
Sbjct: 122 YTRNDLRDSVSAFSTTPAFYTFTRQLNRTAALRGRIGYAFGEQGDFLAYFTAGVARGEFD 181
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY------------ 205
S +++ ++ G G+GL ++ ++S+ Y +
Sbjct: 182 HSFSSSNTANSFTSSGGD---SADGYQAGVGLQRRLSDNVSVGVEYLFTRLEDEDTRVRV 238
Query: 206 ----IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
P + + A +D+ R D +A+ L F
Sbjct: 239 GPGTAPATNPFLRVNPAGTDLRRTDTDFSANAVRLTATYRF 279
>gi|312115597|ref|YP_004013193.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC
17100]
gi|311220726|gb|ADP72094.1| hypothetical protein Rvan_2888 [Rhodomicrobium vannielii ATCC
17100]
Length = 254
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 67/182 (36%), Gaps = 31/182 (17%)
Query: 54 WSGNYVGLHISRLYETHP---------LADTINRKTYNSLLPNGL--GIELGHNIQLEDF 102
W+G ++GL + H ++ + + + G+ +E+G++ Q +F
Sbjct: 44 WTGFHLGLGVGGAAVNHEIDAGLYDVRSGESKSIAGIDGISGTGVFGTVEVGYDRQYGNF 103
Query: 103 VFGINCHTTAAKDDST--------FYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGG 153
V GI + D ST +K+ V + GY V+ S L Y +GG+
Sbjct: 104 VGGIFFNYDFGDDISTDVSLLGHDLASVKQTDSW--TVGGRLGYLVNASTLAYVLGGYTE 161
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV 213
+ S A D S +G GL+ + +SL YRY ++
Sbjct: 162 STFELS---------VPVANFSTDDTFSGWTVGGGLETKLTSSLSLKGEYRYTEFDTNTY 212
Query: 214 NN 215
Sbjct: 213 KT 214
>gi|83951536|ref|ZP_00960268.1| possible outer membrane protein [Roseovarius nubinhibens ISM]
gi|83836542|gb|EAP75839.1| possible outer membrane protein [Roseovarius nubinhibens ISM]
Length = 221
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 52/158 (32%), Gaps = 29/158 (18%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y G + D + N G GI G++ L +V G
Sbjct: 72 DWTGFYGGAQLGY-------GDVSSNGALNGDDVIG-GISAGYDYDLGSWVLGGGLDYDF 123
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
A + E F L+AGY V + LIYG GG+ A
Sbjct: 124 ADINLGGGTNLENVF---RAKLRAGYKVGNGLIYGTGGYA------------------QA 162
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G +G G ++MV+ +IS+ Y
Sbjct: 163 DTNTTGSEDGYFVGAGYEHMVSQNISVGGEALYHEFEN 200
>gi|170747433|ref|YP_001753693.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170653955|gb|ACB23010.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 68/253 (26%), Gaps = 72/253 (28%)
Query: 54 WSGNYVGLHISRLY---------ETHPLADTINRKTYNSL---------LPNGLGIELGH 95
W+G Y G++ + P IN + G ++G+
Sbjct: 41 WTGFYFGVNAGYGFDANSRNTTNYALPGGSLINSPGTAGVVSVNNRSNNDGFSGGAQIGY 100
Query: 96 NIQL--------------------------EDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
N Q +++ FG A + +
Sbjct: 101 NYQFTPGSGVVIGFEADAQYVDFARRANATQNYAFGGAPGIAFAAPRAFVATSGNGLDYF 160
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ D L+YG GGF + D + D + G G+
Sbjct: 161 GTVRGRLGYAFDRTLVYGTGGFAYGSG--------QDDQNFAGNRFRDSFRTGWAAGGGI 212
Query: 190 DYMV----------NYDISLSASYRYIPHHIHSVNNS----------NAKSDVERVDRKG 229
+Y + + ++L Y+ + N + + K
Sbjct: 213 EYALPTDSFLNFFRSNAVTLKVEGLYVSLDRQKNSAGGVFYGNLLPPNGIAYLNGAAAKT 272
Query: 230 NAHIASLGINMHF 242
+ G+N F
Sbjct: 273 EFAVVRAGLNYKF 285
>gi|254510731|ref|ZP_05122798.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221534442|gb|EEE37430.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 228
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 58/187 (31%), Gaps = 29/187 (15%)
Query: 46 YQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
G W+G Y G I D + GI LG++ L D+V G
Sbjct: 70 ALAQSSGNWTGFYGGAQIGYA-------DIDTNVSGVDGDGLIGGIILGYDYDLGDWVVG 122
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKV 164
+ D + E + + +AGY V+ L+YG G+ A +
Sbjct: 123 GGFDYDWSDVDLSSAATVESVW---RIKARAGYKVNPQGLLYGTAGYADADTDNL----- 174
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
G + +G G + +V +IS+ Y + + + +
Sbjct: 175 -------------GSDNGWFIGAGYEQIVAPNISVGGELLYHEFDDFNSTGVDVDATTLQ 221
Query: 225 VDRKGNA 231
V
Sbjct: 222 VRVAYRF 228
>gi|307294323|ref|ZP_07574167.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
gi|306880474|gb|EFN11691.1| putative outer membrane protein [Sphingobium chlorophenolicum L-1]
Length = 217
Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 83/218 (38%), Gaps = 21/218 (9%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGLG 90
L A + + ++G V + + D N + S+ G
Sbjct: 6 AATLLTGAAVASPALAQEPNPTFTGPRVEAILGYDRTGAGSSVDNDNDRDDQSIDGLLYG 65
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDST---------FYRLKEKYFIYGDVVLKAG-YSV 140
+ G+++ L V G+ T + S+ F R+K+ +Y V +AG +
Sbjct: 66 VGAGYDVNLGSAVIGVEGEYTDSTAKSSRTDFTDQFGFGRVKQGRDLY--VGARAGILAS 123
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ L+Y GG+ ++ L+ + D ++ F +G G++ +N +
Sbjct: 124 PNTLVYVKGGYT-----NTKLDVLAGDTNQETDTNFK--LDGWRIGGGVERAINANSFAK 176
Query: 201 ASYRYIPHHIHSVNNSNA-KSDVERVDRKGNAHIASLG 237
YRY + ++ +N SD +D + +AS+G
Sbjct: 177 LEYRYSKYEDAHIDFANGASSDEFGIDTDRHQVVASVG 214
>gi|46203688|ref|ZP_00051145.2| COG0124: Histidyl-tRNA synthetase [Magnetospirillum magnetotacticum
MS-1]
Length = 284
Score = 58.7 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 51/177 (28%), Gaps = 33/177 (18%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN----------------GLGIEL 93
W+G Y GLH + + T + + +G
Sbjct: 37 PVFTWTGFYAGLHTGYAFTDNQNIRTSGNDLFTAGNVTAGRRPASLKSEVDGFSKIGGGF 96
Query: 94 GHNIQLED---FVFGINCHTTAAKDDSTFY-------------RLKEKYFIYGDVVLKAG 137
G+N+Q FV G+ T D + G V K G
Sbjct: 97 GYNVQFTPGSGFVAGVALDVTWLDLDKHTGFYGTPNPVVGNASVYTQNIDFLGTVNGKLG 156
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYMV 193
Y+ D L+YG GG YV + + G + G G++Y +
Sbjct: 157 YAFDRFLVYGTGGLAFGYVGYGADFYNPNATVLQYTGGARKIFETGYNYGGGIEYAI 213
>gi|319783372|ref|YP_004142848.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169260|gb|ADV12798.1| outer membrane protein-like protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 400
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 23/200 (11%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQL-EDFVFGINC 108
WSG YVG+ H + + +N L NG+ + G++ + E F+ G
Sbjct: 10 FNWSGAYVGIGGGFGASVHKFS--VPGLDFNGLGGNGVFGELTAGYDYMVSERFLLGGFI 67
Query: 109 HTTAAKDDSTFYRLKEKYFI---YG-DVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEK 163
+ + + YG DV L+AGY ++ + L Y +GG+ +
Sbjct: 68 DANLSNIGPSLSIAGGDVDLTNSYGFDVGLRAGYLLNPNTLGYVLGGYTWQHFKL----- 122
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS-VNNSNAKSDV 222
+ F + S VLG+G++ ++ + +L YRY + S ++ +A D+
Sbjct: 123 --DGSGAADGLEFSQNRSGYVLGVGMETVLRGNWTLKTEYRYADYGDKSVLDLGDASLDI 180
Query: 223 ERVDRKGNAHIASLGINMHF 242
E + H + N F
Sbjct: 181 E-----PSTHTFHIAANYRF 195
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 68/218 (31%), Gaps = 25/218 (11%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG------ 90
F + W+G Y G + H L + S NG+G
Sbjct: 195 FGAQNGGGTSFAAPTYDWTGFYAGGALGAGTMVHDLNLNLGLGA--SGELNGIGGEGVFG 252
Query: 91 -IELGHNIQLEDFVFGINCHTTAAKDDSTF----YRLKEKYFIYGDVVLKAGYSV-DSLL 144
+G++ +V G+ + + +K D + + G V +S L
Sbjct: 253 EASVGYDHDFGSWVAGVQLDARYSGIQTKLDLGPVSIKGDADYGFDALARIGAKVNESTL 312
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
Y +GG+ + + + +D S +G GL+ V+ ++++ YR
Sbjct: 313 AYVLGGYSWQHFDLHAEAPGGG-----SADIYDWGSSGFSIGGGLETAVSSNMTVGLEYR 367
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y + + D + LG F
Sbjct: 368 YSQYQKEDFGSGGILED------TPSFQTVRLGAKYKF 399
>gi|294011267|ref|YP_003544727.1| putative outer membrane protein [Sphingobium japonicum UT26S]
gi|292674597|dbj|BAI96115.1| putative outer membrane protein [Sphingobium japonicum UT26S]
Length = 217
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 21/218 (9%)
Query: 32 RKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA-DTINRKTYNSLLPNGLG 90
L A ++ D ++G V + + + D N + S+ G
Sbjct: 6 AATLLTGAAVSSPALAQDVNPTFTGPRVEAILGYDHTGAGSSVDNDNDRDDQSIDGLLYG 65
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDST---------FYRLKEKYFIYGDVVLKAG-YSV 140
+ G+++ L V G+ T + S F R+K+ +Y V +AG +
Sbjct: 66 VGAGYDVNLGSAVVGVEGEFTDSTAKSGRSDPTDQFGFGRVKQGRDLY--VGARAGILAS 123
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+ L+Y GG+ ++ L+ + + + F +G G++ +N +
Sbjct: 124 PNTLVYVKGGYT-----NTKLDVLAGNTNVETDTNFK--LDGWRIGAGVERAINANTFAK 176
Query: 201 ASYRYIPHHIHSVNNSNAKSDVE-RVDRKGNAHIASLG 237
YRY + ++ ++ + E +D + +ASLG
Sbjct: 177 LEYRYSKYEDAHIDFADGTTTDEFGIDTDRHQIVASLG 214
>gi|188583655|ref|YP_001927100.1| porin [Methylobacterium populi BJ001]
gi|179347153|gb|ACB82565.1| porin [Methylobacterium populi BJ001]
Length = 288
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 66/254 (25%), Gaps = 74/254 (29%)
Query: 54 WSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGL--GIELG 94
W+G Y G + + T P T N G G ++G
Sbjct: 41 WTGFYAGFNAGYGFGTQDDRAPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIG 100
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKE----------------KYFIYGDVVLK 135
+N Q FV G+ A R +G V +
Sbjct: 101 YNYQFTPGSGFVIGVEADAQYADFGRNRNRFVSTSPLAAQQVFNPAGLSGLDFFGTVRGR 160
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-- 193
GY+ D L+YG GGF S D + V G G++Y +
Sbjct: 161 LGYAFDRTLVYGTGGFAYGSGGGREFGTGVSS---------DDFQTGWVAGGGVEYALPT 211
Query: 194 --------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-----------------RK 228
+ ++L Y+ +S D + R
Sbjct: 212 DSFLNFFKSSAVTLKVEGLYVNLDRNSGGRGAFAVDNQGRTVSVGNPGTVLVSGGQQVRD 271
Query: 229 GNAHIASLGINMHF 242
+ G+N F
Sbjct: 272 TEFAVVRAGLNYKF 285
>gi|218530922|ref|YP_002421738.1| porin [Methylobacterium chloromethanicum CM4]
gi|218523225|gb|ACK83810.1| porin [Methylobacterium chloromethanicum CM4]
Length = 285
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 61/209 (29%), Gaps = 41/209 (19%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
+V +LA DL PR+ + + W+G Y GLH + +P T
Sbjct: 13 LVSTAALAADL--PRREAPP------IAFAPVPVFTWTGFYAGLHTGYAFTDNPNIQTRG 64
Query: 78 RKTYNSLLPN----------------GLGIELGHNIQL---EDFVFGINCHTTAAKDDST 118
+ + +G G+N Q FV G+ T D
Sbjct: 65 NDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNHQFTPGGGFVAGLAFDATWLDLDKR 124
Query: 119 FY-------------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ G V K GY+ D +YG GG +V +
Sbjct: 125 TGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAFDRFFVYGTGGLAFGHVSYGADFFNP 184
Query: 166 SDNSKNAKGRFDG-HGSSVVLGIGLDYMV 193
G + G G++Y +
Sbjct: 185 GATVLQYTGGGRKIFETGYNYGGGIEYAI 213
>gi|87118661|ref|ZP_01074560.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|87118664|ref|ZP_01074563.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|86166295|gb|EAQ67561.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
gi|86166298|gb|EAQ67564.1| putative outer-membrane immunogenic protein precursor [Marinomonas
sp. MED121]
Length = 258
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 70/217 (32%), Gaps = 43/217 (19%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--------------- 89
+ ++ E W G Y G+ I T + + Y + NG
Sbjct: 21 QAEETETVNWEGLYTGIAIGISSSTASPSTEVEYSGYFNDNSNGSDRDQLDPILQREIEG 80
Query: 90 -----GIELGHNIQLEDFVFGINCHT-------------------TAAKDDSTFYRLKEK 125
+ LG++ Q FV+G+ A + +T +K
Sbjct: 81 DTTSGSLLLGYHFQKGKFVYGLEADLTFAEFSESESEGPTDYDTTAGASNFTTVTEIKTD 140
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGG-FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
Y + K GY D+ L++ G + S + + D +
Sbjct: 141 YMF--SLRPKVGYVKDNFLMHISAGPVISEFTTTHSYTDTHGSGASLSFEDKD-SSVGLS 197
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
IG+DY+++ +S+ A Y Y+ + + SD
Sbjct: 198 ANIGIDYLISNGLSIRADYTYLHFSDILDGSGDVNSD 234
>gi|240142230|ref|YP_002966740.1| hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens
AM1]
gi|240012174|gb|ACS43399.1| Hypothetical protein MexAM1_META2p0552 [Methylobacterium extorquens
AM1]
Length = 269
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 53/185 (28%), Gaps = 34/185 (18%)
Query: 53 IWSGNYVGLHISRLYETHPL--------ADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
WSG YVG + + P + N + ++ G +G + Q+ VF
Sbjct: 58 DWSGAYVGFQVGGAFAGKPSIGDDRVTRSLLSNGREFSGFTGGG---HVGFDYQVGSVVF 114
Query: 105 GINCHTTAAKDDST----------------FYRLKEKYFIYGDVVLKAGYSVDSL--LIY 146
G + I G V + G++ L L Y
Sbjct: 115 GGIGDINYVDIRAKGAGPFTLVQNGVVTTYNATGTAGLEIDGTVRARLGFAGLDLPILPY 174
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKG----RFDGHGSSVVLGIGLDYMVNYDISLSAS 202
GG + + +D + A R +G G+DY +I
Sbjct: 175 VTGGLALG-TGFGNFRLLGTDPATGAVTSQNLRDSRTNVGYAVGGGVDYAFTDNIRARVE 233
Query: 203 YRYIP 207
Y Y
Sbjct: 234 YLYTD 238
>gi|49475066|ref|YP_033107.1| hemin binding protein c [Bartonella henselae str. Houston-1]
gi|49237871|emb|CAF27067.1| Hemin binding protein c [Bartonella henselae str. Houston-1]
Length = 276
Score = 58.7 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 68/245 (27%), Gaps = 59/245 (24%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKT---YNSLLP--NGL--GIELGHNIQLED- 101
W+G Y+G I + KT + LP +G G+ G N+ L +
Sbjct: 39 PTFSWTGFYIGGQIGGFSSKTKMDILSKGKTIPVSDDFLPKLSGFMGGLYAGSNVDLGNG 98
Query: 102 FVFGINCHTTAAKDDSTFYR---------------------------------------L 122
+ G++ D T
Sbjct: 99 LILGVDTDIIWTDKDDTKTVPPYEIAENHVNYVNKMLKDAGINIGDNKLEAGKYTRALGF 158
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD-----NSKNAKGRFD 177
K G ++ G++ + ++ Y GG + D + + +
Sbjct: 159 TFKEKWAGATRVRIGFAAERIMPYVAGGIAYTQLQDITSISITKKETGKVIASGNLSDET 218
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
LG G+D + ++ + A YRY +N ++ + +G
Sbjct: 219 KTLVGYTLGAGVDLAMTNNVIVRAEYRYSDFGKKKFSNDKYET-------SYKTNDFRVG 271
Query: 238 INMHF 242
+ F
Sbjct: 272 VAYKF 276
>gi|163852164|ref|YP_001640207.1| porin [Methylobacterium extorquens PA1]
gi|240139496|ref|YP_002963971.1| putative outer membrane protein [Methylobacterium extorquens AM1]
gi|254561910|ref|YP_003069005.1| outer membrane protein [Methylobacterium extorquens DM4]
gi|163663769|gb|ABY31136.1| porin [Methylobacterium extorquens PA1]
gi|240009468|gb|ACS40694.1| putative outer membrane protein [Methylobacterium extorquens AM1]
gi|254269188|emb|CAX25154.1| putative outer membrane protein [Methylobacterium extorquens DM4]
Length = 285
Score = 58.3 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 61/209 (29%), Gaps = 41/209 (19%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTIN 77
+V +LA DL PR+ + + W+G Y GLH + +P T
Sbjct: 13 LVSTAALAADL--PRREAPP------IAFAPVPVFTWTGFYAGLHTGYAFTDNPNIQTRG 64
Query: 78 RKTYNSLLPN----------------GLGIELGHNIQL---EDFVFGINCHTTAAKDDST 118
+ + +G G+N Q FV G+ T D
Sbjct: 65 NDPFTASNVTLARRPASLKSEVDGFSRIGGGFGYNHQFTPGGGFVAGLAFDATWLDLDKR 124
Query: 119 FY-------------RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ G V K GY+ D +YG GG +V +
Sbjct: 125 TGFYGAPNPTIGNASVYTQSLDFLGTVNGKLGYAFDRFFVYGTGGLAFGHVSYGADFFNP 184
Query: 166 SDNSKNAKGRFDG-HGSSVVLGIGLDYMV 193
G + G G++Y +
Sbjct: 185 GATVLQYTGGGRKIFETGYNYGGGIEYAI 213
>gi|220922127|ref|YP_002497428.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946733|gb|ACL57125.1| porin [Methylobacterium nodulans ORS 2060]
Length = 284
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 69/241 (28%), Gaps = 53/241 (21%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG----------------LGIELGHNI 97
W+G Y GLH ++ T+ N+ G +G G+N
Sbjct: 42 WTGFYAGLHTDYVFTDRTRITTVGNTAVNAAAVAGLVRAPRIFTEVDGFANIGGGFGYNY 101
Query: 98 QLED---FVFGINCHTTAAKDDSTFY-----------RLKEKYFIYGDVVLKAGYSVDSL 143
Q V G+ + ++ G +V +AGY+ D
Sbjct: 102 QFTPGSGVVVGVQADWAWTDLEKNRGYLSPTVPVFGSAYRQGLGWLGTLVGRAGYAFDRF 161
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD------- 196
+YG+GG V + G+ + G G++Y + D
Sbjct: 162 FVYGLGGLAYGDVT-TGATFFNPGGVVAYTGQITDFRTGFAYGGGIEYAIPDDSFLARLN 220
Query: 197 -----------ISLSASYRYIPHHIHSVNNSN----AKSDVERVDRKGNAHIASLGINMH 241
+++ A Y + +V +N + ++ G N
Sbjct: 221 VLSLIGVQSAAVTIKAEYLHYDLGSRNVLINNTGLAGSPGSFTSRFRTEGNLVRAGFNYK 280
Query: 242 F 242
F
Sbjct: 281 F 281
>gi|49474039|ref|YP_032081.1| hemin binding protein d [Bartonella quintana str. Toulouse]
gi|21689907|gb|AAM68131.1| hemin-binding protein D [Bartonella quintana]
gi|49239543|emb|CAF25900.1| Hemin binding protein d [Bartonella quintana str. Toulouse]
Length = 294
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 9/120 (7%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS--S 182
K G ++ G+S + L+ Y GG + ++ + ++ D +
Sbjct: 182 KQKWSGATRVRVGFSGERLMPYIAGGVAYTQIQNTFVAPPNFVVIDFSRFLHDEKKTFVG 241
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+D+ + ++ + A YRY +RV+ + +G+ F
Sbjct: 242 YTLGGGVDFAMTDNVIMRAEYRYSDFGKKKFGQ-------DRVEIGYKTNDFRVGVAYKF 294
>gi|319403868|emb|CBI77454.1| putative Hemin binding protein b [Bartonella rochalimae ATCC
BAA-1498]
Length = 356
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 42/131 (32%), Gaps = 16/131 (12%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
Y K G ++ G S ++ Y GG A V S + V SKN
Sbjct: 235 VYTHTLKRKWLGATRMRLGLSAGRVMPYIAGGIAYAKVQFISSKTVNIGASKNTVPMSSL 294
Query: 179 HG------SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK-GNA 231
LG G D+ + I L A YRY ++VD K
Sbjct: 295 DSAEVEVMVGYTLGGGFDFAMTDRILLRAEYRYSDF---------GAEKFKKVDLKYYKV 345
Query: 232 HIASLGINMHF 242
+ +G+ F
Sbjct: 346 NDFRIGLAYKF 356
>gi|121602149|ref|YP_989467.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120614326|gb|ABM44927.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 281
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 86/287 (29%), Gaps = 55/287 (19%)
Query: 4 NGYGALFFVVFLSIVVPNHSLAVD-LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH 62
N L + +++ P+ A D + + R + A N + D W G Y G+
Sbjct: 2 NKKNVLLSLCVVAVSSPSLVQAADTVVVSRAVSKTQTAQNAMSVVDHSDLSWGGLYFGVQ 61
Query: 63 ISRLYETHPLA-------DTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
+ + L D + +T L G LG N++ V G++ +
Sbjct: 62 VGGISGNLSLNRKAVSGEDKSSSETLPKLSGFIGGFYLGSNVEFGGGLVVGVDTDVVWSN 121
Query: 115 D------------------------------------DSTFYRLKEKYFIYGDVVLKAGY 138
D Y + K G ++ G
Sbjct: 122 QKYKQLSDPIHVDEEVLKLHQALMSDYGHNSNSLKIGDKIAYNVTRKTNWIGATRIRFGL 181
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG---SSVVLGIGLDYMVNY 195
+ + ++ Y GG + + +V + + F LG G ++++
Sbjct: 182 AGERMMPYVAGGIAYTQLQVTPWFEVTPTKGEVSSIDFMNDKKTMVGYTLGAGFEFLMTD 241
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
D+ L YR+ N D +V + +G+ F
Sbjct: 242 DVILRTEYRHSDF-----GKKNFLKDTSKV--SYKTNDVRIGVAYKF 281
>gi|325915202|ref|ZP_08177525.1| opacity protein [Xanthomonas vesicatoria ATCC 35937]
gi|325538562|gb|EGD10235.1| opacity protein [Xanthomonas vesicatoria ATCC 35937]
Length = 279
Score = 58.3 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 58/218 (26%), Gaps = 35/218 (16%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG----------LGIELGHNIQLEDFVFGINCH 109
G +S + P G LG++ Q ++V+G+
Sbjct: 62 GDQVSTATGADAFSPGFCGGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAE 121
Query: 110 TTAAKDDSTFYRLKEKYFIY---------GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
T + +Y + + GY+ Y G +
Sbjct: 122 YTRNDIRDSVSAFSTTPALYTFTRQLNRTAALRGRIGYAFGQQGNYLAYFTAGVARGEFD 181
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY--------------- 205
S+ + + G G+GL ++ +S+ Y +
Sbjct: 182 HSFASSNTANSFTGSGGDSADGYQAGVGLQRRLSDHVSVGVEYLFTRLQDEDTRVRVGLG 241
Query: 206 -IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
P + + A +D+ R D + + L F
Sbjct: 242 TAPATNPFLRVNPAGTDLRRTDTDFSTNAVRLTATYRF 279
>gi|218533177|ref|YP_002423993.1| porin [Methylobacterium chloromethanicum CM4]
gi|218525480|gb|ACK86065.1| porin [Methylobacterium chloromethanicum CM4]
Length = 299
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 72/280 (25%), Gaps = 89/280 (31%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNE---ADNNVEYQDD-EYGIWSGNYVGLHISRLYETHPLA 73
+ L L P + + +Y WSG YVG H
Sbjct: 3 IATLALLTTVLVSPALAADLDYGVLRGYDDDYPAPAPIIDWSGFYVGGHGGYSSAALGFG 62
Query: 74 DTIN------------------------RKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
+ R T++ G+ G N Q ED V G
Sbjct: 63 NAFQPIVANALRYTVAEAEMNASHLLAARATHSGGASY--GVFAGVNYQFEDVVVGFEAD 120
Query: 110 ------TTAAKDDSTFYRLKEKYFI---------------YGDVVLKAGYSVDSLLIYGM 148
+ D Y + + F+ YG + + GY+ + L +
Sbjct: 121 YTYFGQSGTTSDQIARYMITKDNFLSTVNLSGQASTKIQDYGTIRGRLGYAFGNFLPFVT 180
Query: 149 GGFGGA------------YVIDSSLEKVESDNSKNAKGRFDGHGS--------------- 181
GG Y +++ + + DG+
Sbjct: 181 GGLALGRATVRDTVTIQDYGYNNTTYAANQTGTTKSYIDNDGYSVFFQNNPPGSIPAPGT 240
Query: 182 -----------SVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ +G GL+Y + + L Y+Y+ +
Sbjct: 241 VHGTTKKVTVAGIAVGGGLEYAITPNFLLRGEYQYVLFND 280
>gi|119385805|ref|YP_916860.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
gi|119376400|gb|ABL71164.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
Length = 203
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 28/165 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTA 112
W+G Y G+ +S ++NR + GI G+N QL + V G
Sbjct: 47 WTGFYAGMQMSYS------DFSVNRDGVDDATGGVYGIHAGYNHQLHNNMVIGGEITFDH 100
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ D+ ++++ V K GY+ ++ L+YG+ G+
Sbjct: 101 SSADNDVWQVER----LMTVRAKVGYAHNNWLVYGLAGYAHVRTE--------------G 142
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSAS---YRYIPHHIHSVN 214
R G V GIG DY V+ + S YR+ N
Sbjct: 143 ADRAHGKSGGAVFGIGADYAVSDKWLVGGSWEGYRFSDFKNDPDN 187
>gi|77748528|ref|NP_640827.2| membrane protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 279
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 61/221 (27%), Gaps = 41/221 (18%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG----------LGIELGHNIQLEDFVFGI--- 106
G + + P G LG++ Q ++V+G+
Sbjct: 62 GDQVGTATGADAFSPGFCGGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAE 121
Query: 107 ------NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVI 157
+A FY + + + GY+ + L Y G
Sbjct: 122 YTRNDVRDSVSAFSTTPAFYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFD 181
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY------------ 205
S +++ ++ G GIGL ++ +S+ Y +
Sbjct: 182 HSFASSNTANSFTSSGGD---SADGYQAGIGLQRRLSDKVSVGVEYLFTRLQDDDTRVRV 238
Query: 206 ----IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
P + + A +D+ R D + + L F
Sbjct: 239 GPGTAPATNPFLRVNPAGTDLRRTDTDVSTNAVRLTATYRF 279
>gi|170741476|ref|YP_001770131.1| porin [Methylobacterium sp. 4-46]
gi|168195750|gb|ACA17697.1| porin [Methylobacterium sp. 4-46]
Length = 296
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 71/261 (27%), Gaps = 82/261 (31%)
Query: 54 WSGNYVGLHISRLYETHPLADTI--NRKTYNSLLPNGL-----------------GIELG 94
W+G Y G + + T ++ L+P G G ++G
Sbjct: 43 WTGFYAGFNAGYGFGTSDNNNSTLIGVNAATGLVPPGTTAVLGFRNRDNNDGFVGGGQVG 102
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLK----------------------EKYFIY 129
+N Q V GI A R +
Sbjct: 103 YNYQFTPGAGVVIGIEADAQYADFGRERNRFSLVTNNPAVTGLAAQQVFNPNGLSGLDYF 162
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G V + GY+ D L+Y GGF +S D + +G G+
Sbjct: 163 GTVRGRLGYAFDRTLVYATGGFAYGGGGGTSF----------GLPNRDDFQTGWTVGGGV 212
Query: 190 DYMV----------NYDISLSASYRYIP-------HHIHSVNNSNAKSDVER-------- 224
+Y + + ++L Y+ + +VNN+ V
Sbjct: 213 EYALPTDSFLNFFKSNAVTLKVEGLYVNLDRGNGLNGAFAVNNAGTLITVTSPGVVLVPG 272
Query: 225 ---VDRKGNAHIASLGINMHF 242
V R + G+N F
Sbjct: 273 SGLVRRDTEFAVVRAGLNYKF 293
>gi|77747747|ref|NP_635849.2| membrane protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|77761086|ref|YP_241570.2| membrane protein [Xanthomonas campestris pv. campestris str. 8004]
gi|188989886|ref|YP_001901896.1| putative outer membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|167731646|emb|CAP49824.1| putative outer membrane protein [Xanthomonas campestris pv.
campestris]
Length = 279
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 63/218 (28%), Gaps = 35/218 (16%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNG----------LGIELGHNIQLEDFVFGINCH 109
G +S + P G+ G++ Q+ D+V+G+
Sbjct: 62 GDQVSTATGADAFSPGFCGGAAAGRTPASGCSKDKGGAEYGVRAGYDWQVGDWVYGVVAE 121
Query: 110 TTAAKDDSTFYRLKEKYFIY---------GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS 160
T + +Y + + GY+ + Y G +
Sbjct: 122 YTRNDLRDSVSAFSTTPALYTFTRQLNRTAALRGRVGYAFGAQGDYLAYVTAGVARGEFD 181
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY--------------- 205
S+ + + G + GIGL ++ +S+ Y +
Sbjct: 182 HSFASSNTANSFTGSGGDSANGYQAGIGLQRRLSDHVSVGVEYLFTRLQDEDTRVRVGPG 241
Query: 206 -IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
P + + A +D+ R D +++ L + F
Sbjct: 242 TAPATNPFLRVNPAGTDLRRTDTDFSSNAIRLTASYRF 279
>gi|319409089|emb|CBI82733.1| Hemin binding protein b [Bartonella schoenbuchensis R1]
Length = 367
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 10/118 (8%)
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVID---SSLEKVESDNSKNAKGRFDGHGSSVV 184
G ++ G+ D ++ Y G A + D S+E + +
Sbjct: 257 WSGATRMRIGFVADRIMPYIAVGVTYAQLQDIFSRSVEVAGKEINSFNLSDETKMMVGYT 316
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+D+ + ++ L YRY K ++++ + +G+ F
Sbjct: 317 LGGGIDFAMADNVILRVEYRYSDFGKQ-------KFAKDKLELDYKTNDFRVGVAYKF 367
Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 21/152 (13%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD----EYGIWSGNYVGLHI 63
++F + S+ + A D+ +PR+ W G Y+G I
Sbjct: 10 SIFTLFTASM-----TQAADIRIPRESRPVVAPVEASSVVSPVIAAPIFSWDGFYLGGQI 64
Query: 64 SRLYETHPLADTINRKTYNSLLPNGL-----------GIELGHNIQLED-FVFGINCHTT 111
+ + + P G G+ G N+ L + FV G++
Sbjct: 65 GGFSSKSDRSLYAKQGSSREWAPVGKDALPQLSGFMGGLYAGANVSLGNSFVLGVDTDIA 124
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSL 143
+ T K +Y I DVV G V +
Sbjct: 125 WSNKQDTKVINKREYEIPEDVVYLQGQEVGEV 156
>gi|126736404|ref|ZP_01752146.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126714225|gb|EBA11094.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 211
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 10/154 (6%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLP-NGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y G + L + + + + G+ +Q DFV G
Sbjct: 33 DWSGAYAGAQLDVLTGDEVSLGFAAQSFEDVIETDTIISGFAGYQLQQGDFVIGGELSLG 92
Query: 112 AAKDDSTFYRLKEKYFIY-GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
A + DV + GY + L+YG+ GF + ++D + +E + +
Sbjct: 93 QANGVRFEDVDGLDTDVRLVDVKARVGYDLGDALVYGVAGFSQSRLLDIDEDDLEGLDLE 152
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ + V G G+DY V ++ A Y
Sbjct: 153 TS--------TGVNYGFGVDYRVTEQFTVGAEYL 178
>gi|170745394|ref|YP_001766851.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170658995|gb|ACB28049.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 288
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 66/253 (26%), Gaps = 72/253 (28%)
Query: 54 WSGNYVGLHISRLYETHPLADTINR------------------KTYNSLLPNGLGIELGH 95
W+G YVG++ ++ + T +S G ++G+
Sbjct: 41 WTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVVSVNNRSSNNGFSGGAQIGY 100
Query: 96 NIQLED---FVFGINCHT-----------------------TAAKDDSTFYRLKEKYFIY 129
N QL V G + + +
Sbjct: 101 NWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLAGTPGFAFSAPRAYVATSGNGLDYF 160
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G + GY+ D L+YG GG+ + D + + + +G G+
Sbjct: 161 GTARGRLGYAFDRTLVYGTGGYAYGSG--------QDDQNFAGRNFRSSFRNGYAVGGGI 212
Query: 190 DYMV----------NYDISLSASYRYIPHHIHSVNNS----------NAKSDVERVDRKG 229
+Y + + ++L Y+ S + +
Sbjct: 213 EYALPTDSFLNFFRSSAVTLKVEGLYVNLDRQKNTASGVFIPNLLPPRGVAYLNGAAANT 272
Query: 230 NAHIASLGINMHF 242
+ G+N F
Sbjct: 273 EFAVVRAGLNYKF 285
>gi|156739532|gb|ABU93426.1| Omp25 [Brucella suis]
gi|156739566|gb|ABU93443.1| Omp25 [Brucella melitensis]
gi|156739572|gb|ABU93446.1| Omp25 [Brucella melitensis]
gi|156739576|gb|ABU93448.1| Omp25 [Brucella melitensis]
Length = 106
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 7 KAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYL 66
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 67 TAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 105
>gi|87199458|ref|YP_496715.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM
12444]
gi|87135139|gb|ABD25881.1| hypothetical protein Saro_1437 [Novosphingobium aromaticivorans DSM
12444]
Length = 223
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 74/205 (36%), Gaps = 19/205 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTIN--RKTYNSLLPNGLGIELGHNIQLE-DFVFGI 106
+SG + + + ++ ++ R S+ G +G++I L + V G
Sbjct: 26 PAEAFSGFHAEALVGYDHNRSGSSEDVDNTRDLKQSIDGVEYGGAIGYDIPLGTNLVAGA 85
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVL--------KAGYSVD-SLLIYGMGGFGGAYVI 157
T + + F G V + GY++ S ++Y GG+
Sbjct: 86 EAEITDSSASWDNNNDQPNVFNLGRVEAGRQYYVGARLGYAMSPSTMVYVKGGYS----- 140
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
++ +D + N + R D +G G++ V + + Y+Y + + +
Sbjct: 141 NARYNLQGTDGTTNLRQRLD--ADGYRVGAGVEQKVGENAFVKLEYKYANYSKGEFDFNG 198
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
D R + + H + G+ + F
Sbjct: 199 DTPDSSRFNLDTDRHSITAGVGVRF 223
>gi|319898375|ref|YP_004158468.1| Hemin-binding protein E [Bartonella clarridgeiae 73]
gi|319402339|emb|CBI75878.1| Hemin-binding protein E [Bartonella clarridgeiae 73]
Length = 288
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI--DSSLEKVESDN 168
+ S+ + LKEK G ++ G++VD ++ Y GG + + ++ +
Sbjct: 164 EGSNPVSSSHTLKEK--WVGATRVRIGFAVDRVMPYVSGGVAYTQLQDLLTIRKEGKELP 221
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
G G+D+ + + L A YRY D + K
Sbjct: 222 ITRNVIDDTKVFVGYTFGGGIDFAMAKSVILRAEYRYSDF-----GKKKFAKDKMEIGYK 276
Query: 229 GNAHIASLGINMHF 242
N +G+ F
Sbjct: 277 TND--FRVGVAYKF 288
>gi|83953797|ref|ZP_00962518.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83841742|gb|EAP80911.1| outer membrane protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 198
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 51/183 (27%), Gaps = 30/183 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y GL + + +Y G G+N FV G
Sbjct: 43 GDWTGFYTGLQLGYSDAEVDNGLEGDNGSY--------GFHAGYNYDFGRFVLGGELDYD 94
Query: 112 AAKDD--STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D + +K GY + S LIY GG+ A
Sbjct: 95 KTDIDLNDAAGVTQGSIDSVARAKIKGGYDLGSTLIYATGGYARADTTM----------- 143
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-HSVNNSNAKSDVERVDRK 228
G G+G+DY + S+ A + V+ ++A +
Sbjct: 144 --------GDEDGAFYGVGMDYKITEQYSVGAELLEHKFNDVSGVSGNDADVTTFNIRGS 195
Query: 229 GNA 231
Sbjct: 196 YRF 198
>gi|163746512|ref|ZP_02153870.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380397|gb|EDQ04808.1| outer membrane protein, putative [Oceanibulbus indolifex HEL-45]
Length = 201
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 48/179 (26%), Gaps = 30/179 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y GL + + D + G G++ FV G
Sbjct: 50 GNWTGFYTGLQVGQ-------TDIDSDSGTLDGDDTSYGFHAGYDYDFGKFVLGGELDYD 102
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D +KAGY + L+Y G A
Sbjct: 103 KTDID--LGTAGATADSVARAKVKAGYDFGNTLVYATAGAARADTSV------------- 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G + G+G+ Y V ++ H V + D + +G+
Sbjct: 148 ------GDETGPFAGLGVTYKVTDRYTVGGEVL--QHKFDDVGGTGDDLDATTISLRGS 198
>gi|156739580|gb|ABU93450.1| Omp25 [Brucella canis]
Length = 105
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 6 KAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYL 65
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 66 TAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 104
>gi|240849917|ref|YP_002971306.1| hemin binding protein A [Bartonella grahamii as4aup]
gi|240267040|gb|ACS50628.1| hemin binding protein A [Bartonella grahamii as4aup]
Length = 296
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/299 (18%), Positives = 90/299 (30%), Gaps = 85/299 (28%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE----TH 70
+++ + + A D+ +P ++ A W+G Y+G + T
Sbjct: 12 ATLISASAAQAADVMIPHEVAPAVIAAAP-------SFSWTGFYLGGQVGNFSSKTKVTI 64
Query: 71 PLADTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHT----------------- 110
P + K N P+G GI G N+ L + + G+
Sbjct: 65 PGEERELFKKDNIPSPSGFMGGIYAGSNVDLGNGLILGVETDAVWADREESKKARELTLT 124
Query: 111 ----------------------TAAKDDSTFYRLKEKYFIYGDVVLKAGYS-VDSLLIYG 147
KDD K G ++ G++ VD ++ Y
Sbjct: 125 EKNAADFNAALEKAKVELKDQQQFQKDDKVTETHSYKEKWSGATRVRIGFAAVDRIMPYV 184
Query: 148 MGGFGGAYV--IDSSLEKVESDNSKN------------AKGRFDGHGSSV---------- 183
GG A V I S K E + AK D G +
Sbjct: 185 AGGIAYAQVQGIQSVAGKGERAKVEQKAGGDEIVPEAGAKQSIDLTGGTWADDTKTMLGF 244
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G G+D+ + ++ L A YRY +D + K N +G+ F
Sbjct: 245 TIGGGVDFAMTDNVLLRAEYRYSDF-----GKKKFANDTREFNYKTND--FRVGVAYKF 296
>gi|149184388|ref|ZP_01862706.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
gi|148831708|gb|EDL50141.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
Length = 200
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 16/176 (9%)
Query: 76 INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV-- 133
N S+ G+ G++ V G+ + ++ + + G+V
Sbjct: 32 TNANDDQSIDGLAYGVGAGYDFDAGGVVLGLEAEYVGSTAETEYDMGDFEDIGVGNVETG 91
Query: 134 ------LKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+ G + D LL+Y GG+ ++ +N + D +G
Sbjct: 92 RDLYLGARVGVKANDDLLVYAKGGY-------TNATYNFRNNDGTNEYEVDLDTDGFRVG 144
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
GL+Y ++ + YRY + ++ DV D + H G M F
Sbjct: 145 GGLEYALSGNTFAKVEYRYSNYSDAELDFEGDAPDVAVPDIDLDRHQVMAGFGMRF 200
>gi|156739536|gb|ABU93428.1| Omp25 [Brucella abortus]
Length = 105
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 7 KAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYL 66
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 67 TAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 105
>gi|156739546|gb|ABU93433.1| Omp25 [Brucella abortus]
Length = 109
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 10 KAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYL 69
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 70 TAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 108
>gi|27379463|ref|NP_770992.1| hypothetical protein blr4352 [Bradyrhizobium japonicum USDA 110]
gi|27352615|dbj|BAC49617.1| blr4352 [Bradyrhizobium japonicum USDA 110]
Length = 154
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 103 VFGINCHTTAAKDDSTFYR---------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGG 153
+FG+ + + +F + + VV +AG++V + L Y GG+ G
Sbjct: 1 MFGMEGTISGLDNKGSFLNTAFGAGDDVFSWRANVLATVVGRAGFAVQNNLFYIKGGYAG 60
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
S + V G + +G G +Y V + + Y Y +
Sbjct: 61 VNNRLSVSDTV---GPATGSGGQTHWANGWTVGAGWEYGVTRNWIVGLEYNYAAFGSQT 116
>gi|240141692|ref|YP_002966172.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|240011669|gb|ACS42895.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
Length = 299
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 74/280 (26%), Gaps = 89/280 (31%)
Query: 18 VVPNHSLAVDLYLPRKIDLFNE---ADNNVEYQDD-EYGIWSGNYVGLHISRLYETHPLA 73
+ L L P + + +Y WSG YVG H
Sbjct: 3 IATLALLTTVLVSPALAADLDYGVLRGYDDDYPAPAPIIDWSGFYVGGHGGYSSAALGFG 62
Query: 74 DTIN------------------------RKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
+ R T++ G+ G N Q ED V G
Sbjct: 63 NAFQPIVATALRYSVVEAEMNASQLLAARSTHSGGASY--GVFAGVNYQFEDVVVGFEAD 120
Query: 110 ------TTAAKDDSTFYRLKEKYFI---------------YGDVVLKAGYSVDSLLIYGM 148
+ D Y + + ++ YG + + GY+ +LL +
Sbjct: 121 YTYFGQSGTTSDQIARYMITKDNYLRTVDLSGQASTKIQDYGTIRGRLGYAFGNLLPFVT 180
Query: 149 GGFGGAYVIDSSLEKVES------------DNSKNAKGRFDGHG---------------- 180
GG + +++ + + +G+
Sbjct: 181 GGVAVGRATVHNTVTIQNYGYNNTIYATNQTGTTKSYIDNEGYSVFYQNNPPGSIPAPGT 240
Query: 181 ----------SSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ + +G GL+Y + + L Y+Y+ +
Sbjct: 241 VHGTTKKVTVTGIAVGGGLEYAITPNFLLRGEYQYVLFND 280
>gi|156739538|gb|ABU93429.1| Omp25 [Brucella abortus]
gi|156739542|gb|ABU93431.1| Omp25 [Brucella abortus]
gi|156739562|gb|ABU93441.1| Omp25 [Brucella melitensis]
gi|156739574|gb|ABU93447.1| Omp25 [Brucella melitensis]
gi|156739596|gb|ABU93458.1| Omp25 [Brucella suis]
gi|156739600|gb|ABU93460.1| Omp25 [Brucella suis]
gi|156739604|gb|ABU93462.1| Omp25 [Brucella suis]
gi|156739616|gb|ABU93468.1| Omp25 [Brucella melitensis]
gi|156739628|gb|ABU93474.1| Omp25 [Brucella abortus]
Length = 108
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 9 KAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYL 68
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 69 TAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 107
>gi|310816897|ref|YP_003964861.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308755632|gb|ADO43561.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 237
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 23/201 (11%)
Query: 54 WSGNYVGLHISRLYET--------HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
++G YVGL + + L ++ G+ + V+G
Sbjct: 48 FAGGYVGLGYGHVVSSDDRVGMVDQTTNLLTGVLGDLDLEGGAAILQAGYRWANGNLVYG 107
Query: 106 INCHTTAAKDDST---FYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSL 161
D+ + GY+V SLL+YG G+ A
Sbjct: 108 PTLRVRGGGIDAELTGTSTGSSTVNWEAALRGNLGYTVTPSLLLYGFVGYTYA------- 160
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+VE D + + V G+G +Y +N + SL Y Y + ++ +
Sbjct: 161 -EVEYDVAGAINVAETVNFGGVNAGLGAEYALNDNWSLFGEYEYAGYEGKNLVDPAIN-- 217
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ + H ++G+N F
Sbjct: 218 -QHTRPTPDFHSVNIGVNFSF 237
>gi|156739612|gb|ABU93466.1| Omp25 [Brucella canis]
Length = 104
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 5 KAGAFAGWNFQKDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYL 64
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 65 TAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 103
>gi|319408066|emb|CBI81720.1| Hemin-binding protein C [Bartonella schoenbuchensis R1]
Length = 287
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 8/139 (5%)
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKV 164
GI +K Y K G ++ G++ D ++ Y GG + D L
Sbjct: 156 GIYNENIVSKIKFATYNHILKQKWAGATRVRVGFAADHVMPYVAGGISYTQLQDVLLRSS 215
Query: 165 ESDNS-KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ + G LG G+D+++ + L YRY S
Sbjct: 216 QEQGQIVDNTVGGTGTMIGYTLGAGVDFVMIGNTILRTEYRYSDFGKKQFAKS------- 268
Query: 224 RVDRKGNAHIASLGINMHF 242
V+ + +G+ F
Sbjct: 269 GVEHSYKTNDFRVGVAYKF 287
>gi|163743239|ref|ZP_02150620.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
gi|161383427|gb|EDQ07815.1| outer membrane protein, putative [Phaeobacter gallaeciensis 2.10]
Length = 194
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 49/180 (27%), Gaps = 29/180 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y+G I +L + S G+ G+N FV G
Sbjct: 44 GDWTGAYIGGQIGQL--------DADTSNGLSGDDVSYGVHAGYNYDFGRFVLGGEIDYD 95
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A D + G +KAGY +L Y GG
Sbjct: 96 ATDVDLGGGAATVDSVMRG--KVKAGYDFGPVLAYVTGGVAQVDTSV------------- 140
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G + GIG+ Y V ++ + +A + +
Sbjct: 141 ------GDETGEFYGIGVAYRVTDQWTVGGEVLEHDFDNLGSSGISADATTVSLRASYQF 194
>gi|103486581|ref|YP_616142.1| membrane protein [Sphingopyxis alaskensis RB2256]
gi|98976658|gb|ABF52809.1| membrane protein [Sphingopyxis alaskensis RB2256]
Length = 277
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 65/205 (31%), Gaps = 28/205 (13%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG--INCHTTAAKDDSTF- 119
S + T N N LG++ ++ +FV G + + A+D +
Sbjct: 76 FSPGFCNGAATSTANVGCRNDKDGPEFFGRLGYDKRMGNFVLGAVVEGGHSVARDSVSGF 135
Query: 120 ------YRLKEKYFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
Y + + + L+AGY+ L Y GG A + + ++ + +
Sbjct: 136 STTPASYTMSREADYQANARLRAGYTPGGGALFYVTGGGAYARLDN---RFTTTNTANSF 192
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI---------------HSVNNSN 217
+ +G G + MV +I + Y Y + +
Sbjct: 193 ADNGKTNAWGYTVGGGAELMVTNNIGIGLEYLYTDVKDKDYVVNVGPGSAPATNPFLLNG 252
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+D+ R D H ++ F
Sbjct: 253 GGTDIRRSDPHFRTHSVRGTLSYRF 277
>gi|256809429|gb|ACV30815.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809431|gb|ACV30816.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809433|gb|ACV30817.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809435|gb|ACV30818.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809437|gb|ACV30819.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809439|gb|ACV30820.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809441|gb|ACV30821.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809443|gb|ACV30822.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809445|gb|ACV30823.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809519|gb|ACV30860.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809521|gb|ACV30861.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809525|gb|ACV30863.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809539|gb|ACV30870.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+Y W+G Y GL++ + G G N Q + FV
Sbjct: 29 PVEMAPQYS-WAGGYTGLYLGYGWNKVKTDTV----GTVKPDDMKAGAYAGWNFQQDQFV 83
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 84 YGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|254475346|ref|ZP_05088732.1| putative outer membrane protein [Ruegeria sp. R11]
gi|214029589|gb|EEB70424.1| putative outer membrane protein [Ruegeria sp. R11]
Length = 190
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 60/217 (27%), Gaps = 33/217 (15%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+S+ +L+ + + E W+G Y+G I +L
Sbjct: 5 VSMAAIAAALSTPAFAGNLEEPVVEPVPAPVTVVQTGTDWTGAYIGGQIGQL-------- 56
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+ S GI G+N FV G A D + +
Sbjct: 57 DADTSNGLSGDDVSYGIHAGYNYDFGQFVLGGELDYDATDTDLGGATVDS----VARAKV 112
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
KAGY +L Y GG G + GIG+ Y VN
Sbjct: 113 KAGYEFGPVLAYVTGGVAQVDTSV-------------------GDETGEFYGIGMAYRVN 153
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
++ H + S +D V + +
Sbjct: 154 EQWTVGGEIL--EHDFDDLGGSGISADATTVSLRASY 188
>gi|329851300|ref|ZP_08266057.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19]
gi|328840146|gb|EGF89718.1| outer membrane protein, 31 kDa [Asticcacaulis biprosthecum C19]
Length = 231
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 62/209 (29%), Gaps = 32/209 (15%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-----GIELGHNIQLEDFVFGINCH 109
SG +G+H L+ + + + G+EL H+ Q D VFG+
Sbjct: 32 SGTRIGVHAGYLWGDLEPTSGFDDFGDDHIEGYETDAEVGGVELRHDWQDGDTVFGLYAS 91
Query: 110 TTAAKDD-----------------STFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGF 151
T + ST + + G + + LIY G
Sbjct: 92 WTGTNAEGGTTIEKTTVDSEGVNISTDHGFDTNLAWLASAGGRVGTVINGNTLIYAQVGA 151
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + + A + G+G+DY + SL + +
Sbjct: 152 ASGRLKIT-------ETGDGAGAKRSVTAYGYAAGVGIDYQITDRWSLGFALQRFELSDV 204
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINM 240
S + KGN +ASLG
Sbjct: 205 EFEPDAFSSG--EIKTKGNIAMASLGFRF 231
>gi|156739528|gb|ABU93424.1| Omp25 [Brucella melitensis]
Length = 124
Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 43/138 (31%), Gaps = 15/138 (10%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
GL++ + + G G N Q + V+G+ + +
Sbjct: 1 GLYLGYGWNKAKTSXV----GSIKPDDWKAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSK 56
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
L+ K G + + GY ++ ++ Y G G+ + + N
Sbjct: 57 DGLEVKQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKF 105
Query: 180 GSSVVLGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 106 RVGWTAGAGLEAKLTDNI 123
>gi|319408782|emb|CBI82439.1| Hemin binding protein c [Bartonella schoenbuchensis R1]
Length = 275
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 68/243 (27%), Gaps = 59/243 (24%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLP---------NGL--GIELGHNIQ 98
W+G Y G I L + L +G G+ G N
Sbjct: 42 PSFSWTGFYFGGQIGGFSSKTDLNLNLKGVGSTKLSSIEKDLLPKLSGFMGGLYAGANFD 101
Query: 99 LED-FVFGINCHTTAAKDDST------FYRLKEKYF------------------------ 127
L + V G++ + T Y+ K+
Sbjct: 102 LNNSLVLGVDTDVIWSDKKDTKVIRHSGYKTKDGGHGVQRQHHLQEAVSSDELLEKFIVT 161
Query: 128 --------IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
G ++ G++VD ++ Y GG AY + V + K+
Sbjct: 162 VSHTLKQKWAGATRMRVGFAVDHIMPYIAGGV--AYTQLQDILLVSTGIKKDKIVDETKA 219
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
G G+D+ + D+ L A YR+ + D + +G++
Sbjct: 220 MIGYTFGGGIDFAMMNDLILRAEYRFSNFGKKKFIKDKFEID-------YKTNDFRVGVS 272
Query: 240 MHF 242
F
Sbjct: 273 YKF 275
>gi|220914733|ref|YP_002490041.1| porin [Methylobacterium nodulans ORS 2060]
gi|219952484|gb|ACL62874.1| porin [Methylobacterium nodulans ORS 2060]
Length = 287
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 57/200 (28%), Gaps = 56/200 (28%)
Query: 54 WSGNYVGLHISRLYETHP-----------------LADTINRKTYNSLLPNGLGIELGHN 96
W+G Y G + ++T P + I + ++L G ++G+N
Sbjct: 43 WTGFYAGFNAGYGFDTGPNRGPTVIGVGPATGLVIVPTVIAFRNESNLDGFTGGGQIGYN 102
Query: 97 IQLED---FVFGINCHTTAAKDDSTFYRLKEKYFI----------------YGDVVLKAG 137
Q V G+ R I +G V + G
Sbjct: 103 YQFTPGAGVVIGLEADAQYVDFGRDRNRFIATGPIAAQRVFNPAGLAGLDFFGTVRGRLG 162
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV---- 193
Y+ D LIYG GGF D + G G++Y +
Sbjct: 163 YAWDRTLIYGTGGFAYGSGGGRDF----------GLPNDDDFQTGWTAGGGVEYALPTDS 212
Query: 194 ------NYDISLSASYRYIP 207
+ +++ Y+
Sbjct: 213 FLNFFRSSSVTVKVEGLYVN 232
>gi|163854231|ref|YP_001642274.1| porin [Methylobacterium extorquens PA1]
gi|163665836|gb|ABY33203.1| porin [Methylobacterium extorquens PA1]
Length = 313
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/296 (16%), Positives = 82/296 (27%), Gaps = 99/296 (33%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD-EYGIWSGNYVGLHISRL 66
A ++ +V P +LA DL D + +Y WSG YVG H
Sbjct: 9 ATLALLTTVLVSP--ALAADL------DYGVLRGYDDDYPAPAPIIDWSGFYVGGHGGYS 60
Query: 67 YETHPLADTINRKTYNSLLPNGL----------------------GIELGHNIQLEDFVF 104
+ + ++ + G +NIQL+D VF
Sbjct: 61 SASMGFTNVFSKPYSQYFRARDIETEFGISSLLSFASQRVHGITYGAFASYNIQLDDAVF 120
Query: 105 GINCH-TTAAKDDSTFYRL--------------------KEKYFIYGDVVLKAGYSVDSL 143
GI T+ +K ++ + + + +G + +AGY+ S
Sbjct: 121 GIEVDYTSFSKSGMSYSEISRFVTTKNNMFETVNLRGFSRTELEDFGTIRGRAGYAFGSF 180
Query: 144 LIYGMGGFGGAYVIDSSLEKVES-----------------------DNSKNAKGRFDGHG 180
L + G +V++ N FD
Sbjct: 181 LPFVTAGLAIGRATILDQPEVQNYGYDATAAAAYQTNPKAGAPVTHHGYANGNTAFDPSA 240
Query: 181 ------------------------SSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ V LG GL+Y + + L Y+Y+
Sbjct: 241 PQDPQKSIPDGFYQIPAKPKSKAMAGVALGAGLEYAITPNFLLRGEYQYVLFDDFD 296
>gi|254485896|ref|ZP_05099101.1| outer membrane protein, putative [Roseobacter sp. GAI101]
gi|214042765|gb|EEB83403.1| outer membrane protein, putative [Roseobacter sp. GAI101]
Length = 198
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 46/169 (27%), Gaps = 31/169 (18%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y GL + P + +Y G G+N FV G
Sbjct: 47 GDWTGFYTGLQLGYADADGPGNLDGDNGSY--------GFHAGYNYDFGRFVAGAELDYD 98
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D +K GY + ++Y GG+ A
Sbjct: 99 KTDIDLNNG--AATIDSVARAKVKGGYDFGNYMLYATGGYAQADTTL------------- 143
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
G GIG+ Y V+ S+ A H V +
Sbjct: 144 ------GDEDGAFYGIGMTYRVSETYSVGAELL--EHRFSDVGGVSGSD 184
>gi|256809537|gb|ACV30869.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 5/107 (4%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+ +Y W+G Y GL++ + G G N Q + FV
Sbjct: 29 PVEKAPQYS-WAGGYTGLYLGYGWNKAKTDTV----GTVKPDDMKAGAYAGWNFQQDQFV 83
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 84 YGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|254513426|ref|ZP_05125491.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221532430|gb|EEE35426.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 185
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 23/155 (14%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G YVG + ++ + + LG+ G+ +Q +DFVFG
Sbjct: 23 DWNGAYVGFSLGTNTTNELSSNVTGS--FEADSSTALGVFGGYTVQNDDFVFGGEVAFLR 80
Query: 113 AKD---DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D + + + I+ D+ +AGY V+++L YG+ GF ++
Sbjct: 81 TPDLEFEVDGREVTFDFGIF-DLKGRAGYVVNNILFYGVAGFSRISEQETG--------- 130
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
H + G+G DY + + + Y
Sbjct: 131 --------DHANGFNFGVGADYNLGNNFVIGIEYL 157
>gi|156739534|gb|ABU93427.1| Omp25 [Brucella suis]
gi|156739618|gb|ABU93469.1| Omp25 [Brucella melitensis]
Length = 98
Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 1 GAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYLTA 60
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 61 GIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 97
>gi|192292069|ref|YP_001992674.1| TonB-dependent heme/hemoglobin receptor family protein
[Rhodopseudomonas palustris TIE-1]
gi|192285818|gb|ACF02199.1| TonB-dependent heme/hemoglobin receptor family protein
[Rhodopseudomonas palustris TIE-1]
Length = 1186
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 69/250 (27%), Gaps = 60/250 (24%)
Query: 53 IWSGNYVGLHISR----------LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED- 101
WSG + G++ + + + N + G+ G++ Q +
Sbjct: 937 DWSGFHAGVNTAYNSAKFGGAMTALDGSADSHAANEAPNQQVGALSFGLHAGYDYQFANR 996
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKY-----------------------FIYGDVVLKAGY 138
F+ GI + + + V + GY
Sbjct: 997 FIVGIEADIAKTEIGAPQVTFAAEGVACNCANNLARMRQFEAVQQSEIKWLSTVRGRLGY 1056
Query: 139 SV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG---------RFDGHGSSVVLGIG 188
+V D L+++ GG +S + ++ + V+G G
Sbjct: 1057 AVNDRLMLFASGGVAFMRQDESRTQYRAVNSGNFSWPTTTVAAFTEDSSRTRVGYVIGGG 1116
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV--------------ERVDRKGNAHI- 233
++ V S+ A Y ++A++ V N I
Sbjct: 1117 GEFAVGGAWSIKAEYLLARFTGEDFTFADARAGVLPGNFVTPATYATSNGRKLSSNVDIP 1176
Query: 234 -ASLGINMHF 242
+G+N F
Sbjct: 1177 MVRVGVNYRF 1186
>gi|256809401|gb|ACV30801.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809403|gb|ACV30802.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809405|gb|ACV30803.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809407|gb|ACV30804.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809409|gb|ACV30805.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809413|gb|ACV30807.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809415|gb|ACV30808.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809417|gb|ACV30809.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809419|gb|ACV30810.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809421|gb|ACV30811.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809423|gb|ACV30812.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809425|gb|ACV30813.1| 25 kDa outer membrane protein [Ochrobactrum lupini]
gi|256809427|gb|ACV30814.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809447|gb|ACV30824.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809449|gb|ACV30825.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809451|gb|ACV30826.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809453|gb|ACV30827.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809455|gb|ACV30828.1| 25 kDa outer membrane protein [Ochrobactrum anthropi ATCC 49188]
gi|256809457|gb|ACV30829.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809459|gb|ACV30830.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809461|gb|ACV30831.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809463|gb|ACV30832.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809465|gb|ACV30833.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809467|gb|ACV30834.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809469|gb|ACV30835.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809471|gb|ACV30836.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809473|gb|ACV30837.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809475|gb|ACV30838.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809477|gb|ACV30839.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809479|gb|ACV30840.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809481|gb|ACV30841.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809483|gb|ACV30842.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809487|gb|ACV30844.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809489|gb|ACV30845.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809491|gb|ACV30846.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809493|gb|ACV30847.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809495|gb|ACV30848.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809497|gb|ACV30849.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809499|gb|ACV30850.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809501|gb|ACV30851.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809503|gb|ACV30852.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809505|gb|ACV30853.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809507|gb|ACV30854.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809509|gb|ACV30855.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809511|gb|ACV30856.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809515|gb|ACV30858.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809517|gb|ACV30859.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809523|gb|ACV30862.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809527|gb|ACV30864.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809529|gb|ACV30865.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809531|gb|ACV30866.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809533|gb|ACV30867.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
gi|256809535|gb|ACV30868.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+Y W+G Y GL++ + G G N Q + FV
Sbjct: 29 PVEMAPQYS-WAGGYTGLYLGYGWNKAKTDTV----GTVKPDDMKAGAYAGWNFQQDQFV 83
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 84 YGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|294627228|ref|ZP_06705815.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294667706|ref|ZP_06732918.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292598467|gb|EFF42617.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292602546|gb|EFF45985.1| membrane protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 279
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 58/203 (28%), Gaps = 31/203 (15%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI---------NCHTTAAKDDST 118
T G LG++ Q ++V+G+ +A
Sbjct: 80 GGAAAGRTPASGCSKDKGGAEYGARLGYDWQAGNWVYGVVAEYTRNDVRDSVSAFSTTPA 139
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
FY + + + GY+ + L Y G S +++ ++ G
Sbjct: 140 FYTFTRQLNRTAALRGRIGYAFGTQGDYLAYITAGVARGEFDHSFASSNTANSFTSSGGD 199
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRY----------------IPHHIHSVNNSNAK 219
GIGL ++ +S+ Y + P + + A
Sbjct: 200 ---SADGYQAGIGLQRRLSDKVSVGVEYLFTRLQDDDTRVRVGPGTAPATNPFLRVNPAG 256
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+D+ R D + + L F
Sbjct: 257 TDLRRTDTDVSTNAVRLTATYRF 279
>gi|156739552|gb|ABU93436.1| Omp25 [Brucella abortus]
Length = 123
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG 147
G G N Q + V+G+ + + L+ K G + + GY ++ ++ Y
Sbjct: 24 KAGAFAGWNFQQDQIVYGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARVGYDLNPVMPYL 83
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
G G+ + + N G GL+ + +I
Sbjct: 84 TAGIAGSQIKLN-----------NGLDDESKFRVGWTAGAGLEAKLTDNI 122
>gi|256809485|gb|ACV30843.1| 25 kDa outer membrane protein [Ochrobactrum cytisi]
Length = 130
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+Y W+G Y GL++ + G G N Q + FV
Sbjct: 29 PVEMAPQYS-WAGGYTGLYLGYGWNKAKTDTV----GTIKPDDMKAGAYAGWNFQQDQFV 83
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 84 YGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|209966188|ref|YP_002299103.1| outer membrane protein [Rhodospirillum centenum SW]
gi|209959654|gb|ACJ00291.1| outer membrane protein [Rhodospirillum centenum SW]
Length = 231
Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 62/196 (31%), Gaps = 15/196 (7%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI----ELGHNIQLEDFVFGINCHTT 111
G YVG + + T + T + G+ LG+ ++ GI
Sbjct: 42 GGYVGAALGYAWMKPNGTTTFSNATTQKVDRTNDGVTGAVFLGYGKTIDTLYLGIEGEIG 101
Query: 112 AAKDDS----TFYRLKEKYFIYGDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ + + L+AG + L+YG G+ + S +
Sbjct: 102 ISDQEKNSTLAGNTYNFDAGTSLGIALRAGLLATPDTLVYGRIGWQRTDLDVSGRLGSVA 161
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ H + +G G+++ + ++ Y Y + + V+ + R +
Sbjct: 162 GTPT---MDENEHLNGWRIGGGVEHALTENVLARLEYNYTDYESYKVSYGQGGA---RTN 215
Query: 227 RKGNAHIASLGINMHF 242
+ + GI F
Sbjct: 216 AEPHESAVRAGIAYRF 231
>gi|146278175|ref|YP_001168334.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC
17025]
gi|145556416|gb|ABP71029.1| hypothetical protein Rsph17025_2139 [Rhodobacter sphaeroides ATCC
17025]
Length = 197
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 50/172 (29%), Gaps = 26/172 (15%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
WSG YVG + + I+ N + G+ G+ V G
Sbjct: 42 PVTDWSGFYVGGQLGYG----DVGTEISGLDGNGAIG---GVHAGYRYDFGRAVVGAEIA 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D + + L AG + L+Y G G + +S D
Sbjct: 95 YDMTNIDIGD---SAELDNVATLKLMAGGKIGRGLLYATAG--GTWADVTSDAGDPDD-- 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
V GIG DYM+N S+ A ++A +
Sbjct: 148 ------------GYVYGIGYDYMLNDRWSVGAELLRHEWDTFDDAGTDADAT 187
>gi|310639322|ref|YP_003944081.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308752898|gb|ADO44042.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 261
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 77/253 (30%), Gaps = 41/253 (16%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
A F +I L+ + P I + W G YVG +++
Sbjct: 32 AAFLASTSAIAANAGGLSTPVMEPPVIMVQPTPMPAPS--------WQGAYVGANVNYGD 83
Query: 68 ----ETHPLADTINRKTYNSLLPNGLG----IELGHNIQLEDFVFGINCHTTAAKDD--- 116
T L + +++ + G I G++ Q +++FG+ + D
Sbjct: 84 LSVDSTGVLETALQGAGFDTTVATADGVNYAIRGGYDWQFNNWLFGLGGEYSFGSYDGGL 143
Query: 117 ------STFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + L+AGY+ S Y + G+ A +
Sbjct: 144 SGDLVTALGTDIDLSIDSVATAYLRAGYAFSQSTAAYLLVGYTWATAEATL--------- 194
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ + G+G+++ N S+ Y Y + N ++ D
Sbjct: 195 --GGTTYSEDYEAASYGLGVEHRFNRAWSVYGEYVYTDFGDINPTNDPTYDNLAEADL-- 250
Query: 230 NAHIASLGINMHF 242
+G+N F
Sbjct: 251 --GQFKIGVNFRF 261
>gi|256809411|gb|ACV30806.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+Y W+G Y GL++ + G G N Q + FV
Sbjct: 29 PVEMAPQYS-WAGGYTGLYLGYGWNKAKTDTV----GTVKPDDMKAGAYAGWNFQQDQFV 83
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+G+ + T L+ K G + + GY ++ ++ Y G
Sbjct: 84 YGVEGDAGYSWAKKTKDGLEVKQGFEGSLRARLGYDLNPIMPYITAG 130
>gi|85704834|ref|ZP_01035935.1| possible outer membrane protein [Roseovarius sp. 217]
gi|85670652|gb|EAQ25512.1| possible outer membrane protein [Roseovarius sp. 217]
Length = 209
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 29/178 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+G Y+G + ++ ++ G+ G++ +V G A
Sbjct: 61 WTGFYIGGQLGVG--------VVDSDISSNDEDFIGGVTFGYDHDFGRWVLGGALDYDFA 112
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
++ E+ F V L+ G + + L+YG G+ A + +
Sbjct: 113 DINAGPGTSIEEIF---RVKLRGGPKIGNGLLYGAAGWANADTDTAGRDD---------- 159
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G G +Y+V+ S+ Y + + ++ +V
Sbjct: 160 --------GWFIGAGYEYLVSSQFSVGGEVLYHEFDNFNSTGIDVEATTIQVRATFRF 209
>gi|220921616|ref|YP_002496917.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946222|gb|ACL56614.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 55/202 (27%), Gaps = 56/202 (27%)
Query: 52 GIWSGNYVGLHISRLY----ETHPLADTINRKTYNSLLPNGL-------------GIELG 94
W+G Y G + + P + T P + G ++G
Sbjct: 39 FTWTGFYAGFNAGYGFDVSSNNGPTVLGVGPATGLVFAPTVIAFRNQNNLDGFVGGGQVG 98
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKEKYF----------------IYGDVVLK 135
+N Q FV G+ A R +G V +
Sbjct: 99 YNYQFTPGAGFVIGLEADAQFADFGRNRNRFIATGPIAAQTVFNPAGIAGLDWFGTVRGR 158
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-- 193
GY+VD +L YG GGF D + G G++Y +
Sbjct: 159 LGYAVDRVLFYGTGGFAYGGGGGRDF----------GLPNDDDFQTGWTAGGGVEYALPT 208
Query: 194 --------NYDISLSASYRYIP 207
+ +++ Y+
Sbjct: 209 DSFLNFFRSNAVTVKVEGLYVN 230
>gi|254497414|ref|ZP_05110213.1| putative outer-membrane immunogenic protein precursor [Legionella
drancourtii LLAP12]
gi|254353370|gb|EET12106.1| putative outer-membrane immunogenic protein precursor [Legionella
drancourtii LLAP12]
Length = 319
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 72/263 (27%), Gaps = 73/263 (27%)
Query: 53 IWSGNYVGLHISRLYET-------------------------HPLADTINRKTYNSLLPN 87
+W+G Y G+++ + + + A K +SL
Sbjct: 56 MWNGFYGGINLGGAFSSSDPLLINAHNVQYCPNTMGCSQGLAYATAAVTGTKNKSSLANA 115
Query: 88 GL--GIELGHNIQLED-FVFGINCHTTAAKDDS----------------------TFYRL 122
G G +LG N L+ +V G + + T +
Sbjct: 116 GFIGGGQLGFNQTLQSHYVVGFEADIQGISESNRKKWSASAVNFNDNNGDPQIINTNTAI 175
Query: 123 KEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVIDSSLEKVESDNSKN---------A 172
+ G V GY ++ L+ G GGF V + +N +
Sbjct: 176 VQGTDFLGTVRGHLGYLINPAFLLSGTGGFAYGGVRSQTRIIQSYGIPQNTNNLDANWRS 235
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH-------------IHSVNNSNAK 219
G + +G +M S Y Y I
Sbjct: 236 VGYYANTRLGWTVGGSFAWMPRPAWSAKIEYLYYNLGSVIYKDGNLINNFITPYGPPYYF 295
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
++ + + H+ +G+N HF
Sbjct: 296 NNAVSSTTRFDGHVVRVGVNYHF 318
>gi|119385191|ref|YP_916247.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222]
gi|119374958|gb|ABL70551.1| hypothetical protein Pden_2464 [Paracoccus denitrificans PD1222]
Length = 239
Score = 55.6 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 28/216 (12%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHN 96
+ G W G Y+G + + + + P + +++G+
Sbjct: 35 PQEVAPAIGSWEGLYLGGALGSAFGSDDRVGISQPGGGAAYTPGSVDIRGATFSLQMGYR 94
Query: 97 IQLE----DFVFGINCHTTAAKDDSTFYRL--KEKYFIYG--DVVLKAGYS--VDSLLIY 146
Q E V G A D +F R + G + K G + LL Y
Sbjct: 95 WQREVRGRQIVTGPELAYEAGGADDSFSRAGESASSELNGLLSLRWKTGVLNEAEDLLFY 154
Query: 147 GMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
G G S + + G F S++ +G+G++ +N SL + +
Sbjct: 155 GSVGIAHG-----SFDYTVTGAGMRYDGDFT--DSALTVGLGVEKRLNERASLFGEWEFR 207
Query: 207 PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ ++ + H +G+N F
Sbjct: 208 QFGKTTLTDAAGYT----TRATPEHHSIRVGVNFAF 239
>gi|310815861|ref|YP_003963825.1| putative outer-membrane immunogenic protein precursor
[Ketogulonicigenium vulgare Y25]
gi|308754596|gb|ADO42525.1| putative outer-membrane immunogenic protein precursor
[Ketogulonicigenium vulgare Y25]
Length = 220
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 82/203 (40%), Gaps = 35/203 (17%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRK------TYNSLLPNGLGIEL--GHNIQLEDFVFG 105
+SG YVG ++R + + + T + P+GLG+ L G++ + + +FG
Sbjct: 39 FSGGYVGFGLNRDSGSIDMNGETGDQAQQLLGTRSLGEPSGLGLNLRAGYDWRTGNTIFG 98
Query: 106 INCHTTA--AKDDSTFYRLKEKYFI-YGDVVL---KAGYSVDSLLIYGMGGFGGAYVIDS 159
+ AKDD + + + + +G + GY + +++Y G+ V
Sbjct: 99 VWGEIAQSWAKDDVVIPAVSDTWSVGFGTSTAAMLRLGYDMGGVMVYSNAGYRWTDVELE 158
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SD S + G+G++ ++ +S Y+ H + K
Sbjct: 159 TFSGAYSDRSG-----------GISYGVGIETEFSHHMS-----GYLEFHRN-----TGK 197
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D+E + + + +LG+N F
Sbjct: 198 VDIEGLTADLSLNTFTLGVNYKF 220
>gi|188584563|ref|YP_001928008.1| outer membrane insertion C-terminal signal [Methylobacterium populi
BJ001]
gi|179348061|gb|ACB83473.1| outer membrane insertion C-terminal signal [Methylobacterium populi
BJ001]
Length = 299
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 63/242 (26%), Gaps = 81/242 (33%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL----------------------LPN 87
WSG YVG H + N+L
Sbjct: 39 PVVDWSGFYVGGHGGYSSAALGFGNAFQSIVANALRYTAAEEEMKASQFLAARGIHASGT 98
Query: 88 GLGIELGHNIQLEDFVFGINCH------TTAAKDDSTFYRLKEKYFI------------- 128
G+ G N Q +D V G+ T AA D T +
Sbjct: 99 SYGVYAGVNYQFDDVVVGLEADYTYFGKTGAAFDQITRVMTTANGYRNTVALAGEASTEI 158
Query: 129 --YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG------ 180
YG + + GY + L + GG + + +++ A + + G
Sbjct: 159 EDYGTIRGRIGYGFGNFLPFVTGGLAVGRAVVNDTVAIQNYAYDEAAYKANQTGGPTTYV 218
Query: 181 --------------------------------SSVVLGIGLDYMVNYDISLSASYRYIPH 208
+ V LG GL+Y + + L Y+Y+
Sbjct: 219 NHFGYQIFDQKSPPGSIPDYPTVHGITKKVTVTGVALGGGLEYAITPNFLLRGEYQYVLF 278
Query: 209 HI 210
+
Sbjct: 279 ND 280
>gi|121602865|ref|YP_989466.1| omp25/ropB family outer membrane protein [Bartonella bacilliformis
KC583]
gi|120615042|gb|ABM45643.1| outer membrane protein, omp25/ropB family [Bartonella bacilliformis
KC583]
Length = 300
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 87/303 (28%), Gaps = 93/303 (30%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA--- 73
++ + + A D+ +P++I A W+G Y+G I L H
Sbjct: 14 LISASAAQAADVMIPQEISPIISA---------PTFSWTGLYLGGQIGGLSGKHDFKAIG 64
Query: 74 -DTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHT--------------TAAKD 115
D+ L +G G+ G NI L V G++ +D
Sbjct: 65 KDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEGKLSSNHKAETQD 124
Query: 116 DSTFYR---------------------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
D+ ++ K G ++ G+ D ++ Y GG
Sbjct: 125 DADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFGADRIMPYVSGGVAYT 184
Query: 155 YV--IDSSLEKVESDNSKNAKGRFDGHGS------------------------------- 181
V I S++ K D G +G G
Sbjct: 185 QVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALDVLASGTITDEKKT 244
Query: 182 --SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
LG G+D+ + ++ L YRY D + K N +G+
Sbjct: 245 LLGYTLGAGVDFAMTDNVILRTEYRYSDF-----GKKKFVKDAIETNYKTND--FRVGVA 297
Query: 240 MHF 242
F
Sbjct: 298 YKF 300
>gi|39936343|ref|NP_948619.1| heme receptor [Rhodopseudomonas palustris CGA009]
gi|39650198|emb|CAE28721.1| possible heme receptor [Rhodopseudomonas palustris CGA009]
Length = 1191
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 66/249 (26%), Gaps = 60/249 (24%)
Query: 54 WSGNYVGLHISR----------LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
WSG + G++ + + N + G+ G++ Q F
Sbjct: 943 WSGFHAGVNTAYNSAKFGGAMTALDGSADGHAANEAPNQQVGALSFGLHAGYDYQFASRF 1002
Query: 103 VFGINCHTTAAKDDSTFYRLKEKY-----------------------FIYGDVVLKAGYS 139
+ GI ++ + V + GY+
Sbjct: 1003 IVGIEADVAKTDIGASQVTFASEGVACNCANNLARMRQLEAVQQSEIKWLSTVRGRLGYA 1062
Query: 140 V-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG---------RFDGHGSSVVLGIGL 189
V D L+++ GG +S + ++ + V+G G
Sbjct: 1063 VNDRLMLFASGGVAFMRQDESRTQYRAVNSGNFSWPTTTVAAFTEDSSRTRVGYVIGGGG 1122
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV--------------ERVDRKGNAHI-- 233
++ V S+ A Y ++A++ V N I
Sbjct: 1123 EFAVGGAWSIKAEYLLARFTGEDFTFADARAGVLPGNFVTPATYATSSGRKLSSNVDIPM 1182
Query: 234 ASLGINMHF 242
+G N F
Sbjct: 1183 VRVGFNYRF 1191
>gi|149914031|ref|ZP_01902563.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b]
gi|149812315|gb|EDM72146.1| hypothetical protein RAZWK3B_18548 [Roseobacter sp. AzwK-3b]
Length = 189
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 46/158 (29%), Gaps = 27/158 (17%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G YVG I + S G+ G++ +V G
Sbjct: 38 DWTGPYVGGQIG-------WGNVDTNLPGVSGDDVIGGLIAGYDYDFGQWVVGGGLDYDW 90
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
A + V + GY + + L+YG GG+ A
Sbjct: 91 ADIGLGAGNPTLENVFR--VKARGGYKIGNGLLYGTGGWA------------------QA 130
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G +G G ++MV ++SL Y
Sbjct: 131 DTSTLGDDDGYFIGAGYEHMVTPNVSLGGEVLYHEFDN 168
>gi|76885942|gb|ABA60112.1| pap31-like protein [Bartonella bacilliformis]
Length = 300
Score = 55.2 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 52/303 (17%), Positives = 87/303 (28%), Gaps = 93/303 (30%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA--- 73
++ + + A D+ +P++I A W+G Y+G I L H
Sbjct: 14 LISASAAQAADVMIPQEISPIISA---------PTFSWTGLYLGGQIGGLSGKHDFKAIG 64
Query: 74 -DTINRKTYNSLLPNGL--GIELGHNIQLED-FVFGINCHT--------------TAAKD 115
D+ L +G G+ G NI L V G++ +D
Sbjct: 65 KDSEWPFANKDLKVSGFVGGLYAGSNIDLGSGLVLGVDTDIVWVDKEGKLFSNHRAETQD 124
Query: 116 DSTFYR---------------------LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
D+ ++ K G ++ G+ D ++ Y GG
Sbjct: 125 DADAFKQIFDENKIEVAKGQIKELTQNFSLKEKWAGATRVRIGFGADRIMPYVSGGVAYT 184
Query: 155 YV--IDSSLEKVESDNSKNAKGRFDGHGS------------------------------- 181
V I S++ K D G +G G
Sbjct: 185 QVQAIGSAILKGTKDTGTEGGGGTEGGGGTEGGGGSASKAVRSEALDVLASGTITDEKKT 244
Query: 182 --SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
LG G+D+ + ++ L YRY D + K N +G+
Sbjct: 245 LLGYTLGAGVDFAMTDNVILRTEYRYSDF-----GKKKFVKDAIETNYKTND--FRVGVA 297
Query: 240 MHF 242
F
Sbjct: 298 YKF 300
>gi|300023262|ref|YP_003755873.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525083|gb|ADJ23552.1| hypothetical protein Hden_1749 [Hyphomicrobium denitrificans ATCC
51888]
Length = 240
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 42/221 (19%)
Query: 53 IWSGNYVG-----LHISRLYETHPLAD---TINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
WS +G H + E+ D R T +S G+ + N +L++ V
Sbjct: 24 DWSAISIGAYTQLGHFNSSVESATFNDWSVDQVRSTDSSSTNWNGGLTVAANWRLQNAVI 83
Query: 105 GINCHTTAAKD---------------------DSTFYRLKEKYFIYGDVVLKAGYSVD-S 142
G+ D R V K G+ V +
Sbjct: 84 GVAVDYDPFGSTQGLGCLYYWSDGGQSNVFVSDVQSGRCTRDVAWSASFVGKIGWLVSPT 143
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+YG+GG+ + V + +S N + DG G G++Y + + ++
Sbjct: 144 TWVYGLGGWTVSRVEQN---FEKSFNLEQVHATLDGA----TFGGGIEYRLTENWHVNVE 196
Query: 203 YRYIPHHIHSVNNSNAKSDVER---VDRKGNAHIASLGINM 240
RY +++V +++ G+ LG++
Sbjct: 197 LRYT--KLNTVEKKTFSEEIDAPQFTKFGGDLETVRLGLSY 235
>gi|163853385|ref|YP_001641428.1| porin [Methylobacterium extorquens PA1]
gi|218532243|ref|YP_002423059.1| porin [Methylobacterium chloromethanicum CM4]
gi|240140802|ref|YP_002965282.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|254563312|ref|YP_003070407.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|163664990|gb|ABY32357.1| porin [Methylobacterium extorquens PA1]
gi|218524546|gb|ACK85131.1| porin [Methylobacterium chloromethanicum CM4]
gi|240010779|gb|ACS42005.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|254270590|emb|CAX26593.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 288
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 64/254 (25%), Gaps = 74/254 (29%)
Query: 54 WSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGL--GIELG 94
W+G Y G + + T P T N G G ++G
Sbjct: 41 WTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIG 100
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKE----------------KYFIYGDVVLK 135
+N Q V G+ A R +G V +
Sbjct: 101 YNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGR 160
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-- 193
GY+ D L+YG GGF S N + G G++Y +
Sbjct: 161 LGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQ---------TGWAAGGGIEYALPT 211
Query: 194 --------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-----------------RK 228
+ ++L Y+ + +D + R
Sbjct: 212 DSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRD 271
Query: 229 GNAHIASLGINMHF 242
+ G+N F
Sbjct: 272 TEFAVVRAGLNYKF 285
>gi|170749700|ref|YP_001755960.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170656222|gb|ACB25277.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 287
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 66/253 (26%), Gaps = 72/253 (28%)
Query: 54 WSGNYVGLHISRLY---------ETHPLADTINRKTYNSLLPNGL---------GIELGH 95
W+G YVG++ + N N+++ G ++G+
Sbjct: 40 WTGFYVGVNAGYGFDANSRNTTNYALRGGTLANSPDTNAVVSVNNRSNNNGFSGGAQIGY 99
Query: 96 NIQLED---FVFGINCHT-----------------------TAAKDDSTFYRLKEKYFIY 129
N QL V G + + +
Sbjct: 100 NWQLTPGSGIVVGFEADAQYVDFARRANGTLNYGLTGTPGFAFSAPRAYVATSGNGLDYF 159
Query: 130 GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
G + GY+ D L+YG GG+ + D + + + +G G+
Sbjct: 160 GTARGRLGYAFDRTLVYGTGGYAYGSG--------QDDQTFAGRNFRSSFRNGYAVGGGV 211
Query: 190 DYMV----------NYDISLSASYRYIPHHIHSVNNS----------NAKSDVERVDRKG 229
+Y + + ++L Y+ S + +
Sbjct: 212 EYALPTDSFLNFFRSSAVTLKVEGLYVNLDRQKNTASGVFIPNLLPPRGVAYLNGAAAGT 271
Query: 230 NAHIASLGINMHF 242
+ G+N F
Sbjct: 272 EFAVVRAGLNYKF 284
>gi|310816896|ref|YP_003964860.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
gi|308755631|gb|ADO43560.1| outer membrane protein [Ketogulonicigenium vulgare Y25]
Length = 241
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 64/210 (30%), Gaps = 33/210 (15%)
Query: 52 GIWSGNYVGLHISRLYETH-------PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVF 104
++G YVG + + P + L I G+ +VF
Sbjct: 46 TRFTGAYVGASLGYTFSEDDRVGVHTPAGTFLGDIGEFELAGPSAAIFGGYRWNSGKWVF 105
Query: 105 GINC---------HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGA 154
G + A ++ + GY V + L+YG G+
Sbjct: 106 GPEVSVRFGDVSDDISYAGPIPAASTGTKELNWEAALRATLGYEVTPTTLVYGFLGYSA- 164
Query: 155 YVIDSSLEKVESDNSKNAKGRFDG--HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
VE D N D + + G+G+++ +N ++ Y Y + +
Sbjct: 165 ---------VEYDYVLNGAITLDETVSQNGLTAGLGVEHALNDTWAVRGLYVYNDYDREN 215
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S + + H ++G+ F
Sbjct: 216 LTGSGGRYTTDTTQL----HTVNVGLVYSF 241
>gi|85704833|ref|ZP_01035934.1| possible outer membrane protein [Roseovarius sp. 217]
gi|85670651|gb|EAQ25511.1| possible outer membrane protein [Roseovarius sp. 217]
Length = 197
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 55/185 (29%), Gaps = 31/185 (16%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGI 106
W+G Y G I D G+ G++ + +V G
Sbjct: 41 APTSPNWTGFYGGGQIGY-------GDVDTSAAGVEGDGLIGGVIAGYDYDFGNNWVVGA 93
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
A D E+ F +AGY + + L+YG GG+ A
Sbjct: 94 GLDYDFADIDLGGAASLEEVF---RAKARAGYKIGNGLLYGTGGYAWADTDTF------- 143
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
G +G G ++MV ++SL Y H S A D V
Sbjct: 144 -----------GDDDGYFVGAGYEHMVTENVSLGGEVLY--HQFDDFGTSGADVDATTVQ 190
Query: 227 RKGNA 231
+ +
Sbjct: 191 ARASF 195
>gi|256809513|gb|ACV30857.1| 25 kDa outer membrane protein [Ochrobactrum anthropi]
Length = 130
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+Y W+G Y GL++ + G G N Q + FV
Sbjct: 29 PVEMAPQYS-WAGGYTGLYLGYGWNKAKTDAV----GTIKPDDMKAGAYAGWNFQQDQFV 83
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGG 150
+G+ + + L+ K G + + GY ++ ++ Y G
Sbjct: 84 YGVEGDAGYSWAKKSKDGLEVKQGFEGSLRARLGYDLNPVMPYITAG 130
>gi|220924420|ref|YP_002499722.1| porin [Methylobacterium nodulans ORS 2060]
gi|219949027|gb|ACL59419.1| porin [Methylobacterium nodulans ORS 2060]
Length = 285
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 63/251 (25%), Gaps = 80/251 (31%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTIN----------------------RKTYNSLLPN 87
G W G YVG H + + R
Sbjct: 26 PVGNWDGFYVGGHGGWTSTSFGFGNVFQAPVANYFRLTTYEANLSASTLLRAQDARRDGT 85
Query: 88 GLGIELGHNIQLEDFVFGINCHT--------------------TAAKDDSTFYRLKEKYF 127
G G N Q ++FV G + S K +
Sbjct: 86 SFGAYAGVNFQFDEFVAGAELDYTHLGVTGSTTDAIARQKVTDGYWQALSLVGEAKTRLD 145
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN------------SKNAKGR 175
Y + + GY + + Y GGF + +++ A
Sbjct: 146 DYATIRARFGYDAGNFMPYVTGGFAIGRAQITDTVTIQARGYDQATYNSNQATGATAYVN 205
Query: 176 FDGHGS--------------------------SVVLGIGLDYMVNYDISLSASYRYIPHH 209
DG+ S + G G+++ + +I L A Y+++ +
Sbjct: 206 RDGYRSFDPTNVSRSVVADPDVVQRTREKIVGGIAAGAGMEFALTANILLRAEYQFVQFN 265
Query: 210 IHSVNNSNAKS 220
+ +N +
Sbjct: 266 DFDGHKANINT 276
>gi|254564200|ref|YP_003071295.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|254271478|emb|CAX27493.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 299
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 65/244 (26%), Gaps = 85/244 (34%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLA------------------------DTINRKTYNSLL 85
WSG YVG H R T++
Sbjct: 39 PIIDWSGFYVGGHGGYSSAALGFGNAFQPIVANALRNTVAEIEMGASHYLAARATHSGGA 98
Query: 86 PNGLGIELGHNIQLEDFVFGINCH------TTAAKDDSTFYRLKEKYFI----------- 128
G+ G N Q ED V GI + A D Y + + ++
Sbjct: 99 SY--GVFAGINYQFEDVVAGIEADYTYFGRSGTAFDQIARYSITKDNYLTTVDLTGQAST 156
Query: 129 ----YGDVVLKAGYSVDSLLIYGMGGFGGA------------YVIDSSLEKVESDNSKNA 172
YG + + GY+ + L + GG Y +S+ + +
Sbjct: 157 KIQDYGTIRGRLGYAFGNFLPFFTGGLAVGRATVNDTVTVQNYAYNSATYASNQTGTTRS 216
Query: 173 KGRFDGHG--------------------------SSVVLGIGLDYMVNYDISLSASYRYI 206
G+ + + +G GL+Y + + L Y+Y+
Sbjct: 217 YINNYGYSAFYQNSPPDSIPAPGTVYGTTKKVTVAGIAVGGGLEYAITPNFLLRGEYQYV 276
Query: 207 PHHI 210
+
Sbjct: 277 LFND 280
>gi|319406586|emb|CBI80228.1| Hemin binding protein E [Bartonella sp. 1-1C]
Length = 305
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 10/118 (8%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G ++ G++ D ++ Y G A + D+ V +NA+ +
Sbjct: 198 KEKWTGATRVRIGFAADRIMPYIAAGVSYAELQDTLSVLVSR---RNAEADEEKKMVGYT 254
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G D + + YRY V+ + +G+ F
Sbjct: 255 FGGGFDIALAKSFIMRTEYRYSDFGKKKFAKG-------EVELSYKTNDFRVGVAYKF 305
>gi|89055673|ref|YP_511124.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88865222|gb|ABD56099.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 196
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 29/200 (14%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS--LLPNGLGIELGHNIQLE-DFVF 104
+ W+G Y G + T+ ++ + T + G G G+N +FV
Sbjct: 21 AQDASQWTGFYAG------FATNIISPEFDNSTATTPLQEGTGFGAYGGYNYAFGDNFVV 74
Query: 105 GINCHTTA-AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
G + A +T ++ + ++ GY++ + L+YG G+
Sbjct: 75 GAELGFSGPATFQTTLGANDFEFERVLNARVRGGYAMGNALVYGTLGYQ----------- 123
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ +A +G +V GIGL+ ++N +S+ Y + +A + +
Sbjct: 124 -TVEYGASAGVSTEGAADGLVYGIGLEMLLNDQVSVRLDY------TSTHMTPDAGTIIG 176
Query: 224 RVDRKG-NAHIASLGINMHF 242
+ +A+ LG+ +HF
Sbjct: 177 GSAGEQIDANAVGLGVALHF 196
>gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 347
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G + G I + T ++ + G+E G+N + + G+N +
Sbjct: 22 AGEFTGGWIGLKAGNNNSDVTSLVAAASAKNASTYGLEGGYNWDMGGLLLGVNGFADFNQ 81
Query: 115 ----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+T + + +K G + L Y G+ ++
Sbjct: 82 KVDHATATPGVVSNYGSDALGLDVKLGLPSGNWLPYAKVGYASVAAKGVAV--------- 132
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G GS LG+G++Y S++ Y + + +K N
Sbjct: 133 ------TGTGSGAHLGLGVEYKFAPHWSVAGEY------------TTVSDNFNNNTQKLN 174
Query: 231 AHIASLGINMHF 242
+ ++G+N +F
Sbjct: 175 NNNFTIGLNYYF 186
>gi|148555268|ref|YP_001262850.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1]
gi|148500458|gb|ABQ68712.1| hypothetical protein Swit_2353 [Sphingomonas wittichii RW1]
Length = 273
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 72/247 (29%), Gaps = 61/247 (24%)
Query: 54 WSGNYVGLHISRLYETH-------------------------------PLADTINRKTYN 82
W+G YVG + ++ P + +
Sbjct: 30 WTGFYVGGQLGYAWQPRDGDEQVLFDRNLDGNFGDAFPNFAPGSCGGAPTSASPATGCAK 89
Query: 83 SLLPNGLGIELGHNIQLEDF---VFGINCH---------TTAAKDDSTFYRLKEKYFIYG 130
+ G++ Q + V G TA Y+++ K G
Sbjct: 90 DNDGTTWKVHAGYDYQFGETSGPVIGAVAEYGKTYLYDNVTAFSTTPAVYKMQAKMRSGG 149
Query: 131 DVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ + GYS D+ LIYG GG + +S ++ D G + G G+
Sbjct: 150 ALRARGGYSFDTGTLIYGTGGLAYGKIRNSFSTSNGVNSFTVDGASKDAWGYNY--GGGI 207
Query: 190 DYMVNYDISLSASYRYIPHHIH-------------SVNNSNAK-SDVERVDRKGNAHIAS 235
+ V S+ A Y + + NA +D +R K H
Sbjct: 208 EQKV-GRFSVGALYLFTSLKNNDSTVRASGGPAGGPFTAQNASGTDFKRSFSKFGYHSLL 266
Query: 236 LGINMHF 242
++ HF
Sbjct: 267 ATVSYHF 273
>gi|163850612|ref|YP_001638655.1| porin [Methylobacterium extorquens PA1]
gi|218529335|ref|YP_002420151.1| porin [Methylobacterium chloromethanicum CM4]
gi|240137660|ref|YP_002962131.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
gi|163662217|gb|ABY29584.1| porin [Methylobacterium extorquens PA1]
gi|218521638|gb|ACK82223.1| porin [Methylobacterium chloromethanicum CM4]
gi|240007628|gb|ACS38854.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens AM1]
Length = 289
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 64/254 (25%), Gaps = 74/254 (29%)
Query: 54 WSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGL--GIELG 94
W+G Y G + + T P T N G G ++G
Sbjct: 42 WTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIG 101
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKE----------------KYFIYGDVVLK 135
+N Q V G+ A R +G V +
Sbjct: 102 YNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGR 161
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-- 193
GY+ D L+YG GGF S N + G G++Y +
Sbjct: 162 LGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQ---------TGWAAGGGIEYALPT 212
Query: 194 --------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-----------------RK 228
+ ++L Y+ + +D + R
Sbjct: 213 DSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRD 272
Query: 229 GNAHIASLGINMHF 242
+ G+N F
Sbjct: 273 TEFAVVRAGLNYKF 286
>gi|254560231|ref|YP_003067326.1| outer-membrane immunogenic protein [Methylobacterium extorquens
DM4]
gi|254267509|emb|CAX23351.1| putative outer-membrane immunogenic protein precursor
[Methylobacterium extorquens DM4]
Length = 289
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 64/254 (25%), Gaps = 74/254 (29%)
Query: 54 WSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGL--GIELG 94
W+G Y G + + T P T N G G ++G
Sbjct: 42 WTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIG 101
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKE----------------KYFIYGDVVLK 135
+N Q V G+ A R +G V +
Sbjct: 102 YNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGR 161
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-- 193
GY+ D L+YG GGF S N + G G++Y +
Sbjct: 162 LGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQ---------TGWAAGGGIEYALPT 212
Query: 194 --------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-----------------RK 228
+ ++L Y+ + +D + R
Sbjct: 213 DSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQGRTVSIGNPGTVLVSGGQQVRD 272
Query: 229 GNAHIASLGINMHF 242
+ G+N F
Sbjct: 273 TEFAVVRAGLNYKF 286
>gi|254466120|ref|ZP_05079531.1| putative outer membrane protein [Rhodobacterales bacterium Y4I]
gi|206687028|gb|EDZ47510.1| putative outer membrane protein [Rhodobacterales bacterium Y4I]
Length = 180
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 51/180 (28%), Gaps = 32/180 (17%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y+G I +L ++ S GI G+N FV G
Sbjct: 31 GDWTGFYLGGQIGQL--------DVDATNGASGDDAAYGIHAGYNYDFGRFVLGGELDYD 82
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D +KAGY ++L Y GG A
Sbjct: 83 TTDVDLGGG---ATVDSVARAKVKAGYDFGNVLAYVTGGVAEADSSL------------- 126
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G + G+GL Y V + H NS +D V + +
Sbjct: 127 ------GSETGEFYGVGLAYQVTDQWQIGGEVL--EHEFDDFGNSGVGADATSVSLRASF 178
>gi|15420210|gb|AAK97315.1|AF321116_1 Pap31 [Bartonella henselae phage 60457]
Length = 221
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/209 (17%), Positives = 62/209 (29%), Gaps = 57/209 (27%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY-----NSLLPNGL--GIELGHN 96
W+G Y+G + + D N+K ++ P+G GI G N
Sbjct: 12 PTVISAPAFSWTGFYIGGQVGNFSSKVEITD-PNKKDKLFSKDDTPKPSGFMGGIYAGSN 70
Query: 97 IQLED-FVFGINCHT------------------------------------------TAA 113
+ L + + G+
Sbjct: 71 MDLGNNMILGVETDAVWADREDAKTFSAGAIGEDKLEKFKASLKNANADVAKDKKIDDIV 130
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVE---SDNS 169
K+D L K G ++ G+ + D ++ Y GG A V S KV D
Sbjct: 131 KEDKHTDSLALKEKWSGATRVRIGFTAADRIMPYVAGGVSYAQVQAVSSTKVTQAADDAE 190
Query: 170 KNAKGRFDGHGS--SVVLGIGLDYMVNYD 196
+ FD + LG G+D+ + +
Sbjct: 191 IASAQLFDKTKTLVGFTLGGGVDFAMTDN 219
>gi|170741253|ref|YP_001769908.1| porin [Methylobacterium sp. 4-46]
gi|168195527|gb|ACA17474.1| porin [Methylobacterium sp. 4-46]
Length = 300
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 69/282 (24%), Gaps = 83/282 (29%)
Query: 22 HSLAVDLYLPRKIDLFNEADNNVEYQDDEY--GIWSGNYVGLHISRLYETHPLADTINRK 79
L V P + + A D G W G Y G H +
Sbjct: 10 AGLCVCGLTPARAADLDFATLRGTSYDAPAPAGNWDGFYFGGHGGWTSTSFGFGSVFQAP 69
Query: 80 TYNSLLPNGL----------------------GIELGHNIQLEDFVFGINCHTT-----A 112
N L G +G N QL++FV G T
Sbjct: 70 VANYLRQTKFESDLNASTLLHPGSMRRDSTTFGAYVGINFQLDEFVAGAELDYTHLSARG 129
Query: 113 AKDDSTFYRLKEKYFI----------------YGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
D + Y + + GY + + + GGF
Sbjct: 130 WTSDEIGRAIVGSDGWWRAVYLTGNASTRIDDYATLRARFGYDAGNFMPFVTGGFAIGRA 189
Query: 157 IDSSLEKVE---------SDNSKNAKGRFDGHGS-------------------------- 181
S V+ N A+ + +
Sbjct: 190 QISETIGVQPIEYDQATYKSNQSAARPAYVNYSGYSNFDQTNPGASTPSAPHLLVRSREK 249
Query: 182 ---SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ G G+++ + +I L A Y+++ + + +N +
Sbjct: 250 IVGGIAAGAGMEFAMTANILLRAEYQFVQFNDFDGHKANINT 291
>gi|240142350|ref|YP_002966860.1| putative porin [Methylobacterium extorquens AM1]
gi|240012294|gb|ACS43519.1| putative porin [Methylobacterium extorquens AM1]
Length = 293
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 63/235 (26%), Gaps = 58/235 (24%)
Query: 52 GIWSGNYVGLHISRLYET-------------------HPLADTINRKTYNSLLPNGLGIE 92
W+G + G + + T +P I S G +
Sbjct: 41 FTWTGFFAGFNAGYGFGTSDDRGPITAAVPGTYGVFSNPGPQVIAFAGQRSADGFVGGGQ 100
Query: 93 LGHNIQLED---FVFGINCHTTAAKDDSTFYRLKEKYFI-----------------YGDV 132
+G+N Q V G+ S R + +G V
Sbjct: 101 IGYNYQFTPGSGVVVGVEADAQYVDFGSDRNRFVATSPLAPGAVAFNPNTLTGLDYFGTV 160
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+ GY+ D L+Y GGF D + +G G++Y
Sbjct: 161 RGRLGYAFDRTLVYATGGFAYGSGGGRDFGLPNF--------TRDEFQTGWTVGGGVEYA 212
Query: 193 V----------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-RKGNAHIASL 236
+ + ++L Y+ + NN + G+A + +
Sbjct: 213 LPTDSFLNFFRSSAVTLRVEGLYVNLDQGNRNNGLFAVGATGIPVGLGSAGVVQV 267
>gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + + GL ELG++ + + +TT A DD
Sbjct: 49 GGEFGINRNSVTYG-VFGGYQILNQNNFGLATELGYD-----YFGRVRGNTTFAGDDKE- 101
Query: 120 YRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ K+ +G + LK Y V +L +YG G + + V+ + +K+++ +
Sbjct: 102 -KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVA----LVRNDYYVQQNVAKDSRIKAH 156
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG--NAHIAS 235
S++LG GL+Y + +++ Y+Y+ + + +++E + + + H S
Sbjct: 157 NLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAARKTANIEGTNFQYSPDIHSVS 216
Query: 236 LGINMHF 242
G++ F
Sbjct: 217 AGLSYRF 223
>gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + + GL ELG++ + + +TT A DD
Sbjct: 49 GGEFGINRNSVTYG-VFGGYQILNQNNFGLATELGYD-----YFGRVRGNTTFAGDDKE- 101
Query: 120 YRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ K+ +G + LK Y V +L +YG G + + V+ + +K+++ +
Sbjct: 102 -KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVA----LVRNDYYVQQNVAKDSRIKAH 156
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG--NAHIAS 235
S++LG GL+Y + +++ Y+Y+ + + +++E + + + H S
Sbjct: 157 NLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAARKTANIEGTNFQYSPDIHSVS 216
Query: 236 LGINMHF 242
G++ F
Sbjct: 217 AGLSYRF 223
>gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + + GL ELG++ + + +TT A DD
Sbjct: 49 GGEFGINRNSVTYG-VFGGYQILNQNNFGLATELGYD-----YFGRVRGNTTFAGDDKE- 101
Query: 120 YRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ K+ +G + LK Y V +L +YG G + + V+ + +K+++ +
Sbjct: 102 -KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVA----LVRNDYYVQQNVAKDSRIKAH 156
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG--NAHIAS 235
S++LG GL+Y + +++ Y+Y+ + + +++E + + + H S
Sbjct: 157 NLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAARKTANIEGTNFQYSPDIHSVS 216
Query: 236 LGINMHF 242
G++ F
Sbjct: 217 AGLSYRF 223
>gi|255264827|ref|ZP_05344169.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255107162|gb|EET49836.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 203
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 25/175 (14%)
Query: 48 DDEYG-IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI 106
YG W+G Y G+ + D + G+ G+ L +V G
Sbjct: 41 APTYGRDWTGGYAGIQLGLG-----QVDVDPDGADLNGDGALYGVHAGYMYDLGRYVLGG 95
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+ +ST L K + + GY ++L Y GF D++L V+
Sbjct: 96 ELDYDLTEIEST--ELAGKVDSVLRLKGRVGYDAGAILPYMTAGFAQTDASDTALGGVDD 153
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
G+G Y + I + H + + D
Sbjct: 154 ---------------GYFFGVGAVYAMRDTILVGGEVL--QHSFDDFDGTGFDVD 191
>gi|310816635|ref|YP_003964599.1| heme receptor [Ketogulonicigenium vulgare Y25]
gi|308755370|gb|ADO43299.1| heme receptor [Ketogulonicigenium vulgare Y25]
Length = 1183
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 38/185 (20%)
Query: 53 IWSGNYVGLHIS----------RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED- 101
W+G + GL + + T N +G ++G+N Q +
Sbjct: 901 DWAGWHAGLFTGFNSTENDTSFTALDGSTNSITANEGFVADFNGALVGGQVGYNWQFANG 960
Query: 102 FVFGINCH----------------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL- 144
+ G+ T A + ++ + L+AGY+ +
Sbjct: 961 LILGVQGEFSRPDQRADIEILSNEGTLAGTANLAAGYHQQIDWNAALNLRAGYAFSNDFN 1020
Query: 145 IYGMGG--------FGGAYVIDSSLEKVESDNSKN--AKGRFDGHGSSVVLGIGLDYMVN 194
+YG+ G F +Y D + + + N D + + +G G +Y +N
Sbjct: 1021 MYGLAGVARQEETWFRDSYTADYASRYMPNGNGTTFAGLEEIDVSRNGINIGFGAEYALN 1080
Query: 195 YDISL 199
+ S+
Sbjct: 1081 DNWSI 1085
>gi|163867546|ref|YP_001608745.1| hemin binding protein A [Bartonella tribocorum CIP 105476]
gi|161017192|emb|CAK00750.1| hemin binding protein A [Bartonella tribocorum CIP 105476]
Length = 290
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 47/151 (31%), Gaps = 13/151 (8%)
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYF----IYGDVVLKAGYSV-DSLLIYGMGGFG 152
Q + G + DS + E G ++ G++ D ++ Y GG
Sbjct: 147 QTGNETTGTKKLSAKNARDSEVVDVSEGVGFKQKWAGATRVRVGFAAADRIMPYVAGGVA 206
Query: 153 GAYVIDS-SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + KV +G G+D+ + ++ L A YRY +
Sbjct: 207 YTQLEAAHGQVKVADKTFSAGSSDETATMVGFTIGGGIDFAMTDNVLLRAEYRYSDYGKK 266
Query: 212 SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + D +G+ F
Sbjct: 267 KFFAKEKEYNFKTND-------FRVGVAYKF 290
>gi|163852300|ref|YP_001640343.1| porin [Methylobacterium extorquens PA1]
gi|218531058|ref|YP_002421874.1| porin [Methylobacterium chloromethanicum CM4]
gi|240139636|ref|YP_002964112.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254562046|ref|YP_003069141.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|163663905|gb|ABY31272.1| porin [Methylobacterium extorquens PA1]
gi|218523361|gb|ACK83946.1| porin [Methylobacterium chloromethanicum CM4]
gi|240009609|gb|ACS40835.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254269324|emb|CAX25290.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 290
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 64/254 (25%), Gaps = 74/254 (29%)
Query: 54 WSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGL--GIELG 94
W+G Y G + + T P T N G G ++G
Sbjct: 43 WTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIG 102
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKE----------------KYFIYGDVVLK 135
+N Q V G+ A R +G V +
Sbjct: 103 YNYQFTPGSGVVIGVEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGR 162
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-- 193
GY+ D L+YG GGF S N + G G++Y +
Sbjct: 163 LGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQ---------TGWAAGGGIEYALPT 213
Query: 194 --------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-----------------RK 228
+ ++L Y+ + +D + R
Sbjct: 214 DSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFATDNQGRTVSIGSPGTVLVSGGQQVRD 273
Query: 229 GNAHIASLGINMHF 242
+ G+N F
Sbjct: 274 TEFAVVRAGLNYKF 287
>gi|170743796|ref|YP_001772451.1| PE-PGRS family protein [Methylobacterium sp. 4-46]
gi|168198070|gb|ACA20017.1| PE-PGRS family protein [Methylobacterium sp. 4-46]
Length = 502
Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 46/196 (23%), Gaps = 49/196 (25%)
Query: 53 IWSGNYVGLHISRLYETHPLADTI-------------NRKTYNSLLPNGL-------GIE 92
WSG Y+G + R ++ + G+
Sbjct: 34 DWSGFYLGAQTGGFATGQGRRTFVSGDGGGLTPTVFGGRGGRTGIVAGTVEGRTIFEGVH 93
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
G+N Q D V G+ +AA + + + G + L+YG G G
Sbjct: 94 AGYNWQRGDLVGGVEGDLSAAGPLD---------DVLASLRGRVGVATGRALVYGTAGLG 144
Query: 153 --------------------GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
G + + + G GL+
Sbjct: 145 ILSAPGGRLGVFVGGNGGNGGNAGPGGAGGAGGNGFGTLTISQPGATRLGFAGGAGLEVR 204
Query: 193 VNYDISLSASYRYIPH 208
+ + Y
Sbjct: 205 LTPRVGAGVEALYFLF 220
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 39/142 (27%), Gaps = 28/142 (19%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGM 148
G+ LG N Q V+G A D + + G + + G+ +D LL+YG
Sbjct: 337 GLHLGANAQSARLVYGAEADIDAGTD--------ANHRVLGSLRGRLGWVLDRDLLLYGT 388
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG-------------------SSVVLGIGL 189
G G A L + G V G GL
Sbjct: 389 AGLGLARDEGVRLVFAGNGGPGGNGGPLVAGPGGAGGAGGQALALRAADTQVGFVAGAGL 448
Query: 190 DYMVNYDISLSASYRYIPHHIH 211
+ ++ Y
Sbjct: 449 QARLTDRLTAGVEGLYYGFRAS 470
>gi|323137766|ref|ZP_08072842.1| porin [Methylocystis sp. ATCC 49242]
gi|322397063|gb|EFX99588.1| porin [Methylocystis sp. ATCC 49242]
Length = 337
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 78/288 (27%), Gaps = 98/288 (34%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRK------------------------------TYN 82
+W+G Y GL+ + A T+
Sbjct: 39 MWTGFYAGLNAGYGFGLSSNATTVGNAYDQYYTSYFNQPGWPPLLVAGYGGLMAANSGNA 98
Query: 83 SLLPNGL--GIELGHNIQLEDF-VFGINCHTTA--------------------------- 112
SL NG G ++G+N Q V G+
Sbjct: 99 SLNQNGFIGGGQIGYNYQWSPTIVIGVEADMQGSAIRGSGGYTGVGQDLYSMGRMMLMPH 158
Query: 113 -AKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGA-------YVIDSSLEK 163
++ ++ +G V + GY V +LL++G GG Y S+
Sbjct: 159 GTRNSVGGGTIQAGLDWFGTVRGRVGYLVTPTLLVFGTGGLTYGGAWANGNYTSTSAWCG 218
Query: 164 VESDN------------SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+D GR G G ++M + SL A Y
Sbjct: 219 TPTDACYGGMITTPYSQIAVGSGRTSSTLVGWNAGGGFEWMFMPNWSLKAEAFYYDLGSM 278
Query: 212 SVNNS-----------------NAKSDVERVDRKGNAHIASLGINMHF 242
++N S +A+ + + IA GIN HF
Sbjct: 279 NLNGSAVAAVSNVAAHMGRAVPDAQMIFPTTRVRYDGVIARAGINYHF 326
>gi|188582250|ref|YP_001925695.1| porin [Methylobacterium populi BJ001]
gi|179345748|gb|ACB81160.1| porin [Methylobacterium populi BJ001]
Length = 290
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 63/254 (24%), Gaps = 74/254 (29%)
Query: 54 WSGNYVGLHISRLYETH-----------------PLADTINRKTYNSLLPNGL--GIELG 94
W+G Y G + + T P T N G G ++G
Sbjct: 43 WTGFYAGFNAGYGFGTQDDRVPTVIGVGPASLLVPPGTTAVVAFSNRESNEGFVGGGQIG 102
Query: 95 HNIQLED---FVFGINCHTTAAKDDSTFYRLKE----------------KYFIYGDVVLK 135
+N Q V GI A R +G V +
Sbjct: 103 YNYQFTPGSGVVIGIEADAQYADFGRDRNRFLSTSPLAAQQVFNPGGLSGLDFFGTVRGR 162
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV-- 193
GY+ D L+YG GGF S D + G G++Y +
Sbjct: 163 LGYAFDRTLVYGTGGFAYGSGGGREFGTGVSS---------DDFQTGWAAGGGIEYALPT 213
Query: 194 --------NYDISLSASYRYIPHHIHSVNNSNAKSDVERVD-----------------RK 228
+ ++L Y+ + D + R
Sbjct: 214 DSFLNFFKSSAVTLKVEGLYVNLDRGTGGRGAFAVDNQGRTVSIGSPGTVLVSGGQQVRD 273
Query: 229 GNAHIASLGINMHF 242
+ G+N F
Sbjct: 274 TEFAVVRAGLNYKF 287
>gi|188584143|ref|YP_001927588.1| porin [Methylobacterium populi BJ001]
gi|179347641|gb|ACB83053.1| porin [Methylobacterium populi BJ001]
Length = 302
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 57/230 (24%), Gaps = 74/230 (32%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYE------------------THPLADTINRKTYNSLL 85
+ W+G Y G + + P+ N
Sbjct: 30 PVFTPVPVFTWTGFYAGFNAGYGFGVEDSLAPTQVVTIDRRVVGGPVGAIAGFAFDNGGR 89
Query: 86 PNGL--GIELGHNIQLED---FVFGINCHTTAAKDDSTFYRLK----------------- 123
+G G ++G+N Q V GI A F R
Sbjct: 90 SDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYADLGGRFGRNGLCGTGGIACAVTPGAFV 149
Query: 124 ------------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ +G V + GY+ D +L YG GGF
Sbjct: 150 QPGVTLINPTGLQGLDFFGTVRGRIGYAFDRVLFYGTGGFAYGSFG------------GG 197
Query: 172 AKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIPHHIH 211
D + G G++Y + + +++ Y+ +
Sbjct: 198 RAVDTDDFKTGYAAGGGVEYALPTDSFLNFFRSSAVTIKVEGLYVNFDGN 247
>gi|49473904|ref|YP_031946.1| hemin binding protein a [Bartonella quintana str. Toulouse]
gi|8575707|gb|AAF78059.1|AF266281_1 hemin-binding surface protein A precursor [Bartonella quintana]
gi|21689904|gb|AAM68129.1| hemin-binding protein A [Bartonella quintana]
gi|49239407|emb|CAF25745.1| Hemin binding protein a [Bartonella quintana str. Toulouse]
Length = 272
Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 55/209 (26%), Gaps = 49/209 (23%)
Query: 50 EYGIWSGNYVGLHISRLYETHPL------ADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
W+G Y+G I + + ++ L GI G NI L
Sbjct: 38 PNFSWTGFYIGGQIGNFTSDNKIKGLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGL 97
Query: 103 VFGINCHT-------------------------------------TAAKDDSTFYRLKEK 125
+ G+ +++D+ K
Sbjct: 98 ILGVETDAIWADCEATKTSAIRTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYK 157
Query: 126 YFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGRFDGHG 180
G + G+S D ++ Y GG A + S + ++
Sbjct: 158 AKWSGATRARIGFSAFDRVMPYFAGGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMM 217
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ G+D + ++ L YRY
Sbjct: 218 VGFTVSGGVDVAMTGNVLLRGEYRYSDFG 246
>gi|89054446|ref|YP_509897.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88863995|gb|ABD54872.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 207
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 50/182 (27%), Gaps = 20/182 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y G+ + ADT + G+ G+ L + V G
Sbjct: 44 YDWSGFYGGVQLE---YGDVTADTAAGVEAATGDGALYGLFGGYRYDLGNVVVGAELDLN 100
Query: 112 AAKDD--STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
A D + + GY L+YG G A + + ++
Sbjct: 101 LADIDLDDPTGATIGSLDSVHRLGAEVGYDAGPALLYGTVGVAQATATLGAADLQDN--- 157
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G G+DY+V I++ A + + ++
Sbjct: 158 ------------GYFYGAGIDYLVTDQITVGAEVLQHEFDDFDGTGLDISATTFGINAAF 205
Query: 230 NA 231
Sbjct: 206 RF 207
>gi|84499800|ref|ZP_00998088.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597]
gi|84392944|gb|EAQ05155.1| outer membrane protein, putative [Oceanicola batsensis HTCC2597]
Length = 194
Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 50/180 (27%), Gaps = 32/180 (17%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG Y G + S G LG++ ++V G
Sbjct: 47 TDWSGPYYGASLGFGSWDL---------GGASGEGRNEGAFLGYDYDFGNYVAG--GELQ 95
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+D T + K GY +L+YG G+ A
Sbjct: 96 YIGNDVTVGGTALNGMAR--LKGKLGYDAGPVLLYGTAGYAWADSS-------------- 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G V G+G+DY + +++ A Y Y + + +
Sbjct: 140 -----AGDGDGYVAGVGMDYQFDNGVAVGAEYLYNEFSDFANTGNTLTGNTIEARISYRF 194
>gi|114763049|ref|ZP_01442479.1| possible outer membrane protein [Pelagibaca bermudensis HTCC2601]
gi|114544373|gb|EAU47381.1| possible outer membrane protein [Roseovarius sp. HTCC2601]
Length = 199
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 34/191 (17%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G VG+ + Y + + G+ ++ +++ G
Sbjct: 43 GDWTGPSVGVQLGYGYA------DPDGPEDETSDGAVYGLNAYYDHDFGNWIAGAGVEYE 96
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A D E G + GY + + ++YG GG+ A SL+ +S+
Sbjct: 97 GADIDLGEAGDLESMARVG---GRVGYDLGTTMVYGQGGYARAMTDGGSLDAGDSN---- 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G+G + V +++LS +Y + D + A
Sbjct: 150 ----------GYYVGVGAETYVADNVTLSGDVKYNEFSDFDDD-----------DLEIGA 188
Query: 232 HIASLGINMHF 242
A++G+N F
Sbjct: 189 TTATVGLNYRF 199
>gi|300023990|ref|YP_003756601.1| hypothetical protein Hden_2484 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525811|gb|ADJ24280.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 495
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 60/218 (27%), Gaps = 27/218 (12%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLG-----------IELGHN-IQ 98
W G +G+ + L + + N + G++ +
Sbjct: 27 ANDWEGISLGVGGGYGMTKNDLNLGTGPAISSFIDANIGINGFGGSGGFATLSAGYDHVL 86
Query: 99 LEDFVFGINCHTTAAKDDSTFY----------RLKEKYFIYGDVVLKAGYSVD-SLLIYG 147
V G + + +K K + + GY + + L +
Sbjct: 87 FGPLVVGAFIDYDFSDISTNIGAGSELGEIDANIKFKIENQLSIGGRIGYLIAPTTLFFS 146
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G+ A D S G LG G++ +++ S+ A YRY
Sbjct: 147 TFGYAHAESSDIKANLNIGGGSGGGTLAGVGSFDGYFLGGGVETLISNGFSIKAEYRYTS 206
Query: 208 HHIHSVN---NSNAKSDVERVDRKGNAHIASLGINMHF 242
++ S A + K + +N F
Sbjct: 207 LQAERLDILPGSGADEFITG-SIKPQIQTGRISLNYRF 243
Score = 48.3 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 62/176 (35%), Gaps = 24/176 (13%)
Query: 91 IELGHNIQLED-FVFGINCH-----------TTAAKDDSTFYRLKEKYFIYGDVV--LKA 136
G++ Q+ FV G + A D+ R K + ++ +
Sbjct: 308 ATAGYDYQISPRFVIGAFGDADYSHLKQSNSLSFAIDEDAEIRAGTKTQLKNMLMVGGRI 367
Query: 137 GY-SVDSLLIYGMGGFGGAYVIDSSLE-KVESDNSKNAKGRFDGHG----SSVVLGIGLD 190
GY + L++ GG+ D++L + D A G S +G G++
Sbjct: 368 GYLARPDTLLFLSGGYANVEADDTNLALGISVDGETVAGGGTTLISGRRLSGGFIGGGIE 427
Query: 191 YMVNYDISLSASYRYIPHHIHSV----NNSNAKSDVERVDRKGNAHIASLGINMHF 242
+N +SL A YRYI +V N+ +++ L IN F
Sbjct: 428 TRLNDSLSLKAEYRYIDLGSETVKLLPNDLPEINEIVSTKFDPEIQTGRLSINYRF 483
>gi|221639135|ref|YP_002525397.1| outer membrane protein [Rhodobacter sphaeroides KD131]
gi|221159916|gb|ACM00896.1| outer membrane protein [Rhodobacter sphaeroides KD131]
Length = 200
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 46/150 (30%), Gaps = 23/150 (15%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + I+ N + G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYG----KVDTNIDDLDGNGAIG---GLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNIDLDGIP-DSEVDNVTTLKLMAGGKMGKGLLYATAGGSWA---------------DAS 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
G D + V GIG DYMVN S+ A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE 171
>gi|319405140|emb|CBI78746.1| Hemin binding protein D [Bartonella sp. AR 15-3]
Length = 295
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/251 (17%), Positives = 82/251 (32%), Gaps = 40/251 (15%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDD------EYGIWSGNYVGLHISRLYETHPLA 73
S AVDL +D + N+ Y D G+ SG Y GL+I A
Sbjct: 57 TVTSKAVDLEAALLVDSNDNNKNDKWYAVDSTFLPKPLGMRSGIYTGLNIGIGNNLIVGA 116
Query: 74 DT----INRKTYNSLLPNGLGIELGHNIQLED------------------FVFGINCHTT 111
DT ++ +++ + GI + N L + + + ++
Sbjct: 117 DTDIMWSGKEDSRTVIIDNGGIPMYRNKSLNESGGVIFNPLGSSRNKSAMYHHILKANSA 176
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ LKEK G ++ G+S ++ Y G + D + ++
Sbjct: 177 QGGVTILNHTLKEK--WTGATRVRIGFSAGHIMPYIAAGVSYVDLKDILSVSLFEREAET 234
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+G+ G G+D + ++ + A YRY V+
Sbjct: 235 VEGK---KMVGYTFGGGVDVAMIDNVVMRAEYRYSDFGKKKFAKG-------EVELSYKT 284
Query: 232 HIASLGINMHF 242
+ +G+ F
Sbjct: 285 NDFRVGVAYKF 295
>gi|220922032|ref|YP_002497333.1| porin [Methylobacterium nodulans ORS 2060]
gi|219946638|gb|ACL57030.1| porin [Methylobacterium nodulans ORS 2060]
Length = 294
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 53/210 (25%), Gaps = 64/210 (30%)
Query: 52 GIWSGNYVGLHISRLYE------------THPLADTINRKTY-------NSLLPNGLGIE 92
W+G Y G ++ ++ T +L G +
Sbjct: 40 FTWTGFYAGFNVGYGFDASDNRGPTVIGVGPATGLVPPGATAVIAFTGNRNLEGFVGGGQ 99
Query: 93 LGHNIQLED---FVFGINCHTTAAKDDSTFYRL----------------------KEKYF 127
+G+N Q V GI A R
Sbjct: 100 VGYNYQFTPGSGVVVGIEADAQFADFGRDRNRFIVATNPAALGGVAAQQVFNPNGLAGLD 159
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGI 187
+G V + GY+ D +L YG GGF D + G
Sbjct: 160 WFGTVRGRLGYAFDRVLFYGTGGFAYGGGGGRDF----------GLPNRDDFQTGWTAGG 209
Query: 188 GLDYMV----------NYDISLSASYRYIP 207
G++Y + + ++L Y+
Sbjct: 210 GIEYALPTDSFLNFFRSNAVTLKVEGLYVN 239
>gi|77463270|ref|YP_352774.1| outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77387688|gb|ABA78873.1| possible outer membrane protein [Rhodobacter sphaeroides 2.4.1]
Length = 200
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 46/150 (30%), Gaps = 23/150 (15%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + I+ N + G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYG----KVDTNIDDLDGNGAIG---GLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNIDLDGIP-DSELDNVTTLKLMAGGKMGKGLLYATAGGSWA---------------DAS 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
G D + V GIG DYMVN S+ A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE 171
>gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3]
gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3]
Length = 383
Score = 52.1 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/236 (19%), Positives = 80/236 (33%), Gaps = 38/236 (16%)
Query: 8 ALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLY 67
ALF V + VP ++ + D + NN YVGL Y
Sbjct: 48 ALFSSVLFLLAVPAYAQVENSTSHEFSDYSDTRQNNAHA-----------YVGLRGGGTY 96
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE-KY 126
+ + + G G+ G+ Q + F + T Y LK
Sbjct: 97 FEGACSS---NGSECNDNTFGYGLYGGY--QFISW-FALEGAVTHYGTPDASYGLKNISA 150
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
+ G + +S D F + + + +E +++ ++ + G LG
Sbjct: 151 EVLGSELTGV-FSYD-----LSESFDAYARVGVAYQNIEKNSTGGSELTSNEWGMLSALG 204
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+DY V+ + SL Y++I + NS K + H SLG+ HF
Sbjct: 205 --VDYRVSQNWSLRGEYQFIDG----IGNSEL--------MKSDMHFLSLGLTYHF 246
>gi|319403669|emb|CBI77254.1| Hemin binding protein E [Bartonella rochalimae ATCC BAA-1498]
Length = 306
Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 10/118 (8%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G ++ G++ D ++ Y G + D+ V +NA+ +
Sbjct: 199 KEKWAGATRVRIGFAADRIMPYIAAGVSYTELQDTLSVLVSR---RNAEVDEEKKMVGYT 255
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G G D + + YRY V+ + +G+ F
Sbjct: 256 FGGGFDIAIAKSFIMRTEYRYSDFGKKKFAKG-------EVELSYKTNDFRVGVAYKF 306
>gi|89070001|ref|ZP_01157333.1| possible outer membrane protein [Oceanicola granulosus HTCC2516]
gi|89044449|gb|EAR50580.1| possible outer membrane protein [Oceanicola granulosus HTCC2516]
Length = 200
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 42/179 (23%), Gaps = 25/179 (13%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG Y G+ + T G +G+ V G
Sbjct: 47 DWSGAYGGVQLGY-------GQTDGDVFAEEEEGALYGGFVGYQRDFGSIVAGAELDYLG 99
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D T L+ GY + L Y GG+ A N
Sbjct: 100 T--DITNDATGTDIDSLARAKLRVGYDAGNFLPYATGGYAMA----------------NT 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G + G+G DYMV I++ + +
Sbjct: 142 SGGLEADADGYFYGVGADYMVTDRIAVGGEITKNEFEDFDGSGDDFGMTTASARVSFRF 200
>gi|332187217|ref|ZP_08388956.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17]
gi|332012638|gb|EGI54704.1| hypothetical protein SUS17_2335 [Sphingomonas sp. S17]
Length = 200
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 45/132 (34%), Gaps = 3/132 (2%)
Query: 77 NRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL 134
+R+ ++ +G+ G +G++I + G T + D+ + +
Sbjct: 43 DRQGKDNSSSDGVLYGAGIGYDIPAGPVILGAEGEITGSSSDTRSNNVTVPGDQFRLGAG 102
Query: 135 KAGYSVDSL-LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
+ Y+ + + G ++ + + LG GL+Y +
Sbjct: 103 RDLYAGARVGYMISPVALGYVKAGYTNAKFDARYTNAGVTNVNSQEVGGYRLGAGLEYAI 162
Query: 194 NYDISLSASYRY 205
+ + + YRY
Sbjct: 163 SPNTFVKGEYRY 174
>gi|323138214|ref|ZP_08073286.1| porin [Methylocystis sp. ATCC 49242]
gi|322396466|gb|EFX98995.1| porin [Methylocystis sp. ATCC 49242]
Length = 259
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 65/231 (28%), Gaps = 62/231 (26%)
Query: 52 GIWSGNYVGLHISRLY----ETHPLADTINRKTY--------NSLLPNGL--GIELGHNI 97
W+G Y G++I + + + G+ G++ G+N
Sbjct: 39 FSWTGFYGGVNIGGSWLDRYNYDAWGPAWTGFGWINATQIAATNFSNAGVSGGVQAGYNY 98
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKY-----------------------FIYGDVVL 134
QL ++ + D + +G V
Sbjct: 99 QLWSWL------VAGVEADFQGTSIGASGVNNGWGLGFAGLPVLWGGASRGVDYFGTVRG 152
Query: 135 KAGYS---VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ G + L+YG GGF + ++ G G+ +G G+++
Sbjct: 153 RLGVTLPGWQQFLVYGTGGFAYGEIRINN----------GWLGNLRAVGTGWTVGGGVEW 202
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S Y Y +N S + N H G+N H
Sbjct: 203 AFMPNWSTKVEYLYTSIGADQWGGTNLASQ------RVNMHTVRAGVNYHL 247
>gi|332558148|ref|ZP_08412470.1| outer membrane protein [Rhodobacter sphaeroides WS8N]
gi|332275860|gb|EGJ21175.1| outer membrane protein [Rhodobacter sphaeroides WS8N]
Length = 200
Score = 51.7 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 46/150 (30%), Gaps = 23/150 (15%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + I+ N + G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYG----KVDTNIDDLDGNGAIG---GLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNID-LDGIADSEVDNVTTLKLMAGGKMGKGLLYATAGGSWADA---------------S 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
G D + V GIG DYMVN S+ A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE 171
>gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 68/214 (31%), Gaps = 39/214 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G A + T +G G +L + I +G+ +
Sbjct: 26 FYAGAKAG-------WASFHDGLTQFDHEGDGGGFDLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD-------------------------SLLIYGMGGF 151
+ + Y +G V ++ D +L +YG G
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---H 208
++V+ D ++ + S++LG GL+Y + +++ Y+Y+ +
Sbjct: 139 ALVRNDYYVQQRVDKD----SRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGN 194
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V + + + H S G++ F
Sbjct: 195 VDKAVRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|84515617|ref|ZP_01002979.1| possible outer membrane protein [Loktanella vestfoldensis SKA53]
gi|84510900|gb|EAQ07355.1| possible outer membrane protein [Loktanella vestfoldensis SKA53]
Length = 205
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 47/181 (25%), Gaps = 14/181 (7%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDD--EYGIWSGNYVGLHISRLYE 68
FV + P A W+G Y G +
Sbjct: 7 FVRTAMLAAPFAVAAGMSAAGGMAQPVETVAPTPVAPAPMMASTDWTGFYAGGQLGYA-- 64
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
D T + G+ G+ L V G + D+
Sbjct: 65 -----DVTGSGTTADVDGAIYGVHGGYMYDLGSVVLGGEVDYDLSSIDNVAG--TADLDD 117
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
V + GY + L Y GG A ++S +E D G + ++V G
Sbjct: 118 IMRVKARVGYDAGAFLPYVTGGVVRA---NTSGPDLEVDGDFYGLGVAYKYADNIVFGGE 174
Query: 189 L 189
+
Sbjct: 175 V 175
>gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 20/189 (10%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI----QLEDFVFGINCHTTAAKD 115
G + + GL ELG++ + G N AAK
Sbjct: 49 GGEFGINRNSVTYG-VFGGYQILNQNNFGLATELGYDYFGRVRGNKTFEGENSDKRAAKH 107
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ L K V +L +YG G + + V+ + +K+++ +
Sbjct: 108 SAHGAHLSLKPSYE---------VVPNLDVYGKVGVA----LVRNDYYVQQNVAKDSRIK 154
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG--NAHI 233
S++LG GL+Y + +++ Y+Y+ + + +++E + + + H
Sbjct: 155 AHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAARKTANIEGTNFQYSPDIHS 214
Query: 234 ASLGINMHF 242
S G++ F
Sbjct: 215 VSAGLSYRF 223
>gi|77404769|ref|YP_345342.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77390419|gb|ABA81601.1| putative outer membrane protein [Rhodobacter sphaeroides 2.4.1]
Length = 250
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 28/213 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSL---------LPNGLGIELGHNIQLED- 101
WSG ++G + + ++ + S L +E G+ L
Sbjct: 44 YDWSGFWIGGGLGYGSTNYDISGDADLAEGQSGALELPDLGGQGGLLSLEAGYAYALAPR 103
Query: 102 FVFGINCHTTAAKDD-----------STFYRLKEKYFIYGDVVLKAGYS-VDSLLIYGMG 149
++ D S K + GY D+ +IYG+
Sbjct: 104 WILAGQLDYAFGNIDNDADLSLDGELSLDASYDIKVKSMMAGTARLGYLPSDTTMIYGLA 163
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G A + S G +D + + +G G++ + I L YRY
Sbjct: 164 GLTRAKFE------ADYSVSGVTSGGYDFSDTGLTIGAGMETRLTEKIGLKLEYRYTKFD 217
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ + N + + A+ + F
Sbjct: 218 DYTIFDGNVAGADVKASSDTSIQSATASLTYRF 250
>gi|326387856|ref|ZP_08209462.1| porin [Novosphingobium nitrogenifigens DSM 19370]
gi|326207902|gb|EGD58713.1| porin [Novosphingobium nitrogenifigens DSM 19370]
Length = 200
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 63/192 (32%), Gaps = 27/192 (14%)
Query: 56 GNYVGLHISRLYE--THPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTA 112
G ++G +P Y + LG+ +G + ++ ++FV G
Sbjct: 31 GPFIGAQGGWEENSVNNPSTGVGPTNLYGTGDTGTLGVFVGQDYRILKNFVIGGQAEVNF 90
Query: 113 -AKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T D+ L+AGY + D L+Y GG+ +
Sbjct: 91 PINSHITDGTTTVDPKRSVDLSLRAGYVLRDKTLLYVRGGYSNVRASTI--------INA 142
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G + +LG G++ V I+ YRY +++ K +
Sbjct: 143 ETPIYVSGSQNGWMLGGGIEQYVTKHITGRMEYRY--------------TNLSEGAGKFD 188
Query: 231 AHIASLGINMHF 242
H LG+ HF
Sbjct: 189 RHQLLLGVAYHF 200
>gi|46397588|gb|AAS91725.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 65/200 (32%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + T Y + G + I +G+ +
Sbjct: 27 FYVGAKAG--WATFHHGVNQFNSKYANDERYSDGPTA-YGINRNSVTYGVFGGYQIIDN- 82
Query: 117 STFYRLKEKYFIYGDVVLKAG--YSVDSLLIYGMGGFGGAYVIDSSLE---KVESDNSKN 171
++ Y +G V G + +Y + S L+ KV + +N
Sbjct: 83 ---LAVELGYDYFGRVRGNVGDRRAFKDTKHGAHISLKPSYEVVSGLDLYGKVGAALVRN 139
Query: 172 AKGRFDGHGS---------SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +G+ S++LG G++Y + +++ Y+++ + +V
Sbjct: 140 DYKDYYANGTKDKSHNLKTSLILGAGVEYAITPALAVRLEYQWLSRAGNYGKAEAKAGNV 199
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ +AH S G+ F
Sbjct: 200 TDLRYSPDAHSVSAGLTYRF 219
>gi|255264610|ref|ZP_05343952.1| putative outer membrane protein [Thalassiobium sp. R2A62]
gi|255106945|gb|EET49619.1| putative outer membrane protein [Thalassiobium sp. R2A62]
Length = 207
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 15/151 (9%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
WSG+Y GL S T + Y+ + +G G+N Q + V+G + T
Sbjct: 41 TDWSGSYCGLSYSSAGGTLSYSFGSP---YDYVDETAIGGFCGNNWQRSNLVYGGELNVT 97
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + ++ + GY++ L+YG G+G S+ +
Sbjct: 98 GGSLGHDDINVVGELGTRIELRTRVGYALGDALVYGFLGYG------------RSEITWG 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ + G+G+DYMV + S
Sbjct: 146 GNAPGEYGVAGGTYGLGVDYMVTDSMFASFE 176
>gi|75677151|ref|YP_319572.1| hypothetical protein Nwi_2970 [Nitrobacter winogradskyi Nb-255]
gi|74422021|gb|ABA06220.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 276
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 65/235 (27%), Gaps = 59/235 (25%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA------------------- 73
D + +W G Y+G S
Sbjct: 23 PDDFPFLRGSQPPSLSTVRTVWQGFYIGGQASYGSADMDFKNSGKDLLERLLNHVDVESQ 82
Query: 74 ---DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT-----AAKDDSTFYRLKEK 125
+ +S +G G LG+N+Q+ED VFG+ + T A S
Sbjct: 83 FNLSSWPLGGTSSNRNSGFGGFLGYNLQMEDVVFGVEANYTHSKFLGASSGSQGRSFSYP 142
Query: 126 YFI----------------YGDVVLKAGYSVDSLLIYGMGGFGGAYVI-------DSSLE 162
+G + ++AGYS+ S L Y GG + +
Sbjct: 143 ADYRTSAFVQSNASMQIMDFGSLRVRAGYSLGSFLPYAFGGVAMGQANIRRNASYNLHYQ 202
Query: 163 KVES---------DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
V + + G+G+D M+ + L A + ++
Sbjct: 203 YVGTQIPPLPNLAGGGSLSDNANAHFIYGYAAGLGIDMMIVDGLFLRAEWEFLRF 257
>gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195]
Length = 369
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 22/186 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G I + H NS + + G+ Q + + K +
Sbjct: 59 LYMGSEIGINHYQHGCESWSIDCDKNSTMAS---FFAGY--QFNHHLAFEVAYIDLGKAE 113
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+T+ ++ G + G ++ S+ G + + + +
Sbjct: 114 ATYLEASKQNIYQGSMR---GLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKA 170
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D S G+G+ Y ++ Y Y H + D+ NAH SL
Sbjct: 171 DDWSPSF--GVGMTYQLSDSWQARLQYEYFHHLGND--------DIGGT----NAHATSL 216
Query: 237 GINMHF 242
GI+ F
Sbjct: 217 GISYQF 222
>gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380]
Length = 373
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 70/212 (33%), Gaps = 42/212 (19%)
Query: 54 WSGNYVGL-HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+ + G+ + Y ++ + G+ G+ I L FG+
Sbjct: 36 WASFHEGVRQFNDKYSNDARYNSDTTAYGINRNSVTYGVFGGYQI-LNQNNFGLAAELG- 93
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAG--------------------YSVDSLLIYGMGGFG 152
Y YG V G + +L +YG G
Sbjct: 94 -------------YDYYGRVRGNVGDFREFKHSAHGLNFALKPSYEVLPNLDVYGKVGVA 140
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
V+ + + ++N+ +F +S +LG G++Y + +++ Y+Y+ +
Sbjct: 141 ---VVRNDYKFYGAENTNEPTEKFHKLKASTILGAGVEYAILPELAARIEYQYLNKAGNF 197
Query: 213 VNN--SNAKSDVERVDRKGNAHIASLGINMHF 242
+ DV+ + H + G++ F
Sbjct: 198 NKALVRSGTQDVD-FQYAPDIHSVTAGLSYRF 228
>gi|94497477|ref|ZP_01304047.1| outer membrane protein-like [Sphingomonas sp. SKA58]
gi|94423108|gb|EAT08139.1| outer membrane protein-like [Sphingomonas sp. SKA58]
Length = 217
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 74 DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST---------FYRLKE 124
D N + S+ GI G+++ L V G+ T + S F R+ +
Sbjct: 49 DNNNGRDDQSIDGLLYGIGAGYDVNLGSAVVGVEGEWTDSTAKSDRYDLTDQFGFGRVSQ 108
Query: 125 KYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+Y + +AG + + L+Y GG+ +S L + + + F
Sbjct: 109 GRDLY--IGARAGILANPATLVYVKGGYT-----NSKLNILAGNTDETTDRSFK--LDGW 159
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+G G++ +N + YRY + ++ + +
Sbjct: 160 RIGAGVERAINTNTFAKLEYRYSNYTDAHIDYMDGATS 197
>gi|126462144|ref|YP_001043258.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC
17029]
gi|126103808|gb|ABN76486.1| putative outer membrane protein [Rhodobacter sphaeroides ATCC
17029]
Length = 200
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 46/150 (30%), Gaps = 23/150 (15%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
WSG YVG + + I+ N + G+ G+ V G
Sbjct: 45 DWSGFYVGGQLGYG----KVDTNIDDLDGNGAIG---GLHAGYRYDFGRAVVGAELAYDV 97
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L AG + L+Y G A +
Sbjct: 98 TNID-LDGIADSELDNVTTLKLMAGGKMGKGLLYATAGGSWADA---------------S 141
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
G D + V GIG DYMVN S+ A
Sbjct: 142 IGGADVSDNGYVYGIGYDYMVNDRWSVGAE 171
>gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 365
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 22/186 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G I + H NS + + G+ Q + + K +
Sbjct: 55 LYMGSEIGINHYQHGCESWSIDCDKNSTMAS---FFAGY--QFNHHLAFEVAYIDLGKAE 109
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+T+ ++ G + G ++ S+ G + + + +
Sbjct: 110 ATYLEASKQNIYQGSMR---GLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKA 166
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D S G+G+ Y ++ Y Y H + D+ NAH SL
Sbjct: 167 DDWSPSF--GVGMTYQLSDSWQARLQYEYFHHLGND--------DIGGT----NAHATSL 212
Query: 237 GINMHF 242
GI+ F
Sbjct: 213 GISYQF 218
>gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 371
Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 77/198 (38%), Gaps = 14/198 (7%)
Query: 54 WSGNYVGL-HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT- 111
W+ + G+ + Y + + G+ G+ I L FG+
Sbjct: 34 WATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVTYGVFGGYQI-LNQNNFGLATELGY 92
Query: 112 -----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D F +K + + + +L +YG G V+ + ++ +
Sbjct: 93 DYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVA---VVRNDYKEYGA 149
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+N+ +F +S +LG G++Y + +++ Y+Y+ + +N + +S + VD
Sbjct: 150 ENTNEPTEKFHKLKASTILGAGVEYAILPELAARIEYQYLNKAGN-LNKALVRSGTQDVD 208
Query: 227 RKG--NAHIASLGINMHF 242
+ + H + G++ F
Sbjct: 209 FQYAPDIHSVTAGLSYRF 226
>gi|209886341|ref|YP_002290198.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5]
gi|209874537|gb|ACI94333.1| outer membrane protein, 31 kDa [Oligotropha carboxidovorans OM5]
Length = 113
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 12/118 (10%)
Query: 132 VVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ KAG++V+ LLIY GG A + ++ S V+G G +
Sbjct: 1 MRGKAGFAVNPQLLIYATGGAAFAGTRAT-----DTFIDGTHDITAKATSSGWVVGAGGE 55
Query: 191 YMVNYDISLSASYRYIPHHIHS--VNNSNAKSDVERVDRKGNAH----IASLGINMHF 242
+ +S Y Y S ++S+ + +AH I +N HF
Sbjct: 56 VKLARQVSFGFEYLYADFGNKSYAFDSSHLSGGFAGLPLAIDAHLKLNIVKASLNYHF 113
>gi|119383601|ref|YP_914657.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
gi|119373368|gb|ABL68961.1| putative outer membrane protein [Paracoccus denitrificans PD1222]
Length = 199
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 52/188 (27%), Gaps = 35/188 (18%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINC 108
W+G Y GL + D NR G G+ G+ L FV G
Sbjct: 41 PESDWTGFYAGLQYGKG-----SGDLGNRGALADFGDYDGYGLHAGYQRDLGRFVLGGEL 95
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
D + + L+AG + L Y G V
Sbjct: 96 DYNKISPDENY-----DDGDLTRLRLRAGADMGRFLPYVTLGAAKISVD----------- 139
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-----HSVNNSNAKSDVE 223
D + + G+G D+ V ++ A Y ++ + +D+
Sbjct: 140 --------DFSETGLTYGLGADFKVTERFTVGAEYSRSDFKDVLEDETGISGRDLDTDLV 191
Query: 224 RVDRKGNA 231
++
Sbjct: 192 QLRASYRF 199
>gi|23010810|ref|ZP_00051374.1| COG1024: Enoyl-CoA hydratase/carnithine racemase [Magnetospirillum
magnetotacticum MS-1]
Length = 109
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 37/115 (32%), Gaps = 10/115 (8%)
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
+ + GY+ D L+YG GGF S + D LG G++Y
Sbjct: 1 MRGRLGYAFDRWLVYGTGGFAYGGGSRSPY------AASYPYTLPDTARIGYALGGGVEY 54
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN----AHIASLGINMHF 242
+ IS+ Y+ + + V G + G+N F
Sbjct: 55 ALTDHISVKVEGLYVDLGRRGTGTTVYDATVPAYYGTGRSESGFGVVRGGLNYKF 109
>gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi]
gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 21/200 (10%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG + T Y + G + I +G+ +
Sbjct: 27 FYVGAKAG--WATFHHGVNQFNSKYANDERYSDGPTA-YGINRNSVTYGVFGGYQIIDN- 82
Query: 117 STFYRLKEKYFIYGDVVLKAG--YSVDSLLIYGMGGFGGAYVIDSSLE---KVESDNSKN 171
++ Y +G V G + +Y + S L+ KV + +N
Sbjct: 83 ---LAVELGYDYFGRVRGNVGDRRAFKDTKHGAHISLKPSYEVVSGLDLYGKVGAALVRN 139
Query: 172 AKGRFDGHGS---------SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+ +G+ S++LG G++Y + ++ Y+++ + +V
Sbjct: 140 DYKDYYANGTKDKSHNLKTSLILGAGVEYAITPALAARLEYQWLSRAGNYGKAEAKAGNV 199
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ +AH S G+ F
Sbjct: 200 TDLRYSPDAHSVSAGLTYRF 219
>gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 372
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 39/214 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G A + T +G G L + I +G+ +
Sbjct: 26 FYAGAKAG-------WASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVD-------------------------SLLIYGMGGF 151
+ + Y +G V ++ D +L +YG G
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---H 208
++V+ D ++ + S++LG GL+Y + +++ Y+Y+ +
Sbjct: 139 ALVRNDYYVQQRVDKD----SRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGN 194
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+V + + + H S G++ F
Sbjct: 195 VDKAVRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|170750855|ref|YP_001757115.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans
JCM 2831]
gi|170657377|gb|ACB26432.1| hypothetical protein Mrad2831_4466 [Methylobacterium radiotolerans
JCM 2831]
Length = 210
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 67/207 (32%), Gaps = 19/207 (9%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
V+ + + A L+ P + + +D YG W+G+Y L T
Sbjct: 17 LVLGACWLPAGPAAAQALFWPSIGFAPLPSFAWPQMPEDAYGRWTGSYARLSTGYAVST- 75
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT-----AAKDDSTFYRLKEK 125
+ + S +G E G Q ++GI+ + RL
Sbjct: 76 -------SRHFGSYSGPTVGFEGGRMWQEGPILYGISGGFDYLAGLGGNLTPGYGRLAYS 128
Query: 126 YFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
G + +K G V +L+Y G + +V R D V
Sbjct: 129 NDFAGSLEVKVGTLVAPDVLVYAKTG----ALALHQTLRVGPTPGSLPFTRQD-IAVRPV 183
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIH 211
G+G+++ V +SL+ + I
Sbjct: 184 AGVGVEWAVTDRLSLAVEAGVVGGGIR 210
>gi|170738817|ref|YP_001767472.1| porin [Methylobacterium sp. 4-46]
gi|168193091|gb|ACA15038.1| porin [Methylobacterium sp. 4-46]
Length = 302
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 55/227 (24%), Gaps = 68/227 (29%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLAD--------------------TINRKTYNSLLPNGL 89
W+G Y G + ++ I +
Sbjct: 36 PVFTWTGFYAGFNAGYGFDASSTNPDVIVLTRDPRVVAGPAGSALAIGWTGDRNTEGFSG 95
Query: 90 GIELGHNIQLED---FVFGINCHTTAAKDDSTFYRLK----------------------- 123
G ++G+N Q V GI
Sbjct: 96 GGQIGYNYQFTPGAGVVVGIEADAQYVDFGRNRNAFSFAIPNQPGAQFNGANGLRLFDPR 155
Query: 124 --EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+G V + GY+ D +L YG GGF ++ D +
Sbjct: 156 GLSGLDYFGTVRGRLGYAFDRVLFYGTGGFAYGGGGGTNF----------GLPNTDDFQT 205
Query: 182 SVVLGIGLDYMV----------NYDISLSASYRYIPHHIHSVNNSNA 218
G G++Y + + ++L Y+ + N + A
Sbjct: 206 GWTAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNRRNGAYA 252
>gi|312115944|ref|YP_004013540.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC
17100]
gi|311221073|gb|ADP72441.1| hypothetical protein Rvan_3246 [Rhodomicrobium vannielii ATCC
17100]
Length = 292
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 72/253 (28%), Gaps = 72/253 (28%)
Query: 50 EYGIWSGNYVGLHISRL---------------------------YETHPLADTINRKTYN 82
W+G Y+G ++ + P++D +
Sbjct: 40 PVQTWTGFYLGGNVGGAFVDNNNKNRWDDGEGPWHNVWEKVDHKWTEVPVSDVDHFWGNR 99
Query: 83 SLLPNGL--GIELGHNIQL--EDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY 138
+ + G++ G N Q V G + + K G+
Sbjct: 100 NNNDSQFIGGVQAGFNWQRVGSPLVVGFEVDADFSDN----------VDYLVSARGKLGF 149
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESD---------------NSKNAKGRFDGHGSSV 183
++L+Y GG GA++ ++ K D ++ D + +
Sbjct: 150 GFQNVLLYATGG--GAWIGLNNDNKFGYDDTGWTSGWGDNVVDHTYTVSRRDNDKNFAGW 207
Query: 184 VLGIGLDY---------MVNYDISLSASYRYIPHHIH-----SVNNSNAKSDVERVDRKG 229
V+G G+D+ M+ ++S Y V N + +
Sbjct: 208 VVGGGIDFKPGSFGLLNMLGSNVSFGVLGLYYNFENANNRTWDVYNDDGQYWRYGNRDSL 267
Query: 230 NAHIASLGINMHF 242
+ + +N +F
Sbjct: 268 DFWTVTARLNWNF 280
>gi|289209494|ref|YP_003461560.1| OmpA domain protein transmembrane region-containing protein
[Thioalkalivibrio sp. K90mix]
gi|288945125|gb|ADC72824.1| OmpA domain protein transmembrane region-containing protein
[Thioalkalivibrio sp. K90mix]
Length = 215
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 16/159 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVF-GINCHTTA 112
G+YVG + + + L +GL G+ G L++ ++ G+
Sbjct: 31 GSYVGGQLGW-VGYDIDYREADDGGISGLSASGLTGGVMTGWGTVLDNGLYLGVEFDAQT 89
Query: 113 AKDDSTFYRLKEKYFI-----YGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
D T + + YG + + G +V DS+L+YG+ G+ S + +
Sbjct: 90 EDADLTVRIDDAELGVDSKYSYG-ITGRLGTTVNDSVLLYGLAGYQ-----RSRFDYRLT 143
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ ++ RF + +G+G++Y ++ + + A Y Y
Sbjct: 144 ETDEDLSLRFKDSINGARIGVGVEYQLDNRLFMRAEYSY 182
>gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 31/210 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G A + T +G G L + I +G+ +
Sbjct: 26 FYAGAKAG-------WASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS----------------- 159
+ + Y +G V ++ D GA++
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 160 ----SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHS 212
+ V+ K+++ + S++LG GL+Y + +++ Y+Y+ + +
Sbjct: 139 ALVRNDYYVQQHVDKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNVDKA 198
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V + + + H S G++ F
Sbjct: 199 VRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 31/210 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G A + T +G G L + I +G+ +
Sbjct: 26 FYAGAKAG-------WASFHDGLTQFDHEGDGGGFNLKYGINRNSVTYGVFGGYQILNQN 78
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS----------------- 159
+ + Y +G V ++ D GA++
Sbjct: 79 NFGLATELGYDYFGRVRGNTTFADDKERTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGV 138
Query: 160 ----SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHS 212
+ V+ K+++ + S++LG GL+Y + +++ Y+Y+ + +
Sbjct: 139 ALVRNDYYVQQHVDKDSRIKAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNVDKA 198
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V + + + H S G++ F
Sbjct: 199 VRKTVSIPTGTNFQYSPDIHSVSAGLSYRF 228
>gi|126735844|ref|ZP_01751589.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126715031|gb|EBA11897.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 200
Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 53/207 (25%), Gaps = 28/207 (13%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL---EDFVFGINCH 109
WS Y +S P + + + G +G ++ + VF +
Sbjct: 5 QWSEFYAFGQVSAPIGVQPEYTYVPVDSTTEVPMEGAAAVIGIGYEVARTGNVVFAVEAD 64
Query: 110 TTAAKDDSTFYRL--------------KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAY 155
+ DS + + + GY + Y GG A
Sbjct: 65 ISFGNYDSGQVLVDTTPCITNAPDEACRAEVSAIATGRALIGYKQGAFTPYITGGVAIAR 124
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
++ + FD + G+G+ Y +N +L A +
Sbjct: 125 AS----GHADTGACGGSDCDFDEALTGWTAGLGIIYDINETFALKADLLQYELEDPEFGS 180
Query: 216 SNAKSDVERVDRKGNAHIASLGINMHF 242
+ V +G F
Sbjct: 181 DS-------VTGSFRFGEIRIGAVYRF 200
>gi|149201160|ref|ZP_01878135.1| possible outer membrane protein [Roseovarius sp. TM1035]
gi|149145493|gb|EDM33519.1| possible outer membrane protein [Roseovarius sp. TM1035]
Length = 197
Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 29/158 (18%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTA 112
W+G Y G + D G+ G++ + +V G+
Sbjct: 47 WTGFYAGGQLGY-------GDVDTGAAGVDGDGLIGGLIAGYDYDYGNNWVVGLGLDYDF 99
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
A D E F + + GY V + L+YG GG+ A
Sbjct: 100 ADIDLGAAASLEDVF---RIKSRLGYKVGNGLLYGTGGYAW------------------A 138
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G + G G ++M++ ++SL Y
Sbjct: 139 DTDTLGDDNGYFFGAGYEHMISQNLSLGGEVLYHKFEN 176
>gi|328542550|ref|YP_004302659.1| Porin subfamily [polymorphum gilvum SL003B-26A1]
gi|326412296|gb|ADZ69359.1| Porin subfamily [Polymorphum gilvum SL003B-26A1]
Length = 276
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK-GRFDGHGSSVVLGIGLDYMVNYDI 197
+ ++ Y G G A+V S+++ + + G + L G Y V +
Sbjct: 148 TWYNITPYVGAGIGAAWVNVSNVKSTNPGAATTSYDGSHSQWNLAWALMAGASYAVTPNW 207
Query: 198 SLSASYRYIPHHI-HSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
S+ A YRY SV N + RV K AH LG+ +F
Sbjct: 208 SIDAGYRYKNLGDAKSVKLHNVGTGQSRVKYKDLTAHEIRLGVRYNF 254
>gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 19/202 (9%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
D+ Y SG +G+++ + + GL ELG++ + +
Sbjct: 45 DNTYDYGSGINLGINLGINRNSVTYG-VFGGYQILNQNNFGLATELGYD-----YFGRVR 98
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
+TT + DD + K+ +G + LK Y V +L +YG G + V+
Sbjct: 99 GNTTFSGDDKE--KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVD 156
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHSVNNSNAKSDV 222
D ++ + S++LG GL+Y + +++ Y+Y+ + +V +
Sbjct: 157 KD----SRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIP 212
Query: 223 ERVDRKG--NAHIASLGINMHF 242
+ + + H S G++ F
Sbjct: 213 RGTNFQYSPDIHSVSAGLSYRF 234
>gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305]
gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305]
Length = 372
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA- 112
W+ G +E+ +N + G+ G+ I L FG+
Sbjct: 34 WANFRDGF---TQFESSQENPKLNNGYGINKNTVTYGVFGGYQI-LNQNNFGLAAELGYD 89
Query: 113 ----AKDDSTFY-----RLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSL 161
A+ ++TF ++ K+ +G + LK Y V +L +YG G + +
Sbjct: 90 YFGRARGNTTFAGEDREKVAAKHTAHGAHLSLKPSYEVIPNLDVYGKVGVA----LIRND 145
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
V+S K + + S+ LG G++Y + +++ Y+Y+ + +++ + K+D
Sbjct: 146 YFVQSTPVKGKRTKVHTLKPSLTLGAGVEYAILPELAARIEYQYVN-KVGNLDKAARKAD 204
Query: 222 VERVDRKG--NAHIASLGINMHF 242
+ + + + H S G++ F
Sbjct: 205 KQGTNYQFSPDLHSVSAGLSYRF 227
>gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica]
gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 19/202 (9%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
D+ Y SG +G+++ + + GL ELG++ + +
Sbjct: 45 DNTYDYGSGINLGINLGINRNSVTYG-VFGGYQILNQNNFGLATELGYD-----YFGRVR 98
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
+TT + DD + K+ +G + LK Y V +L +YG G + V+
Sbjct: 99 GNTTFSGDDKE--KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVD 156
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHSVNNSNAKSDV 222
D ++ + S++LG GL+Y + +++ Y+Y+ + +V +
Sbjct: 157 KD----SRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIP 212
Query: 223 ERVDRKG--NAHIASLGINMHF 242
+ + + H S G++ F
Sbjct: 213 RGTNFQYSPDIHSVSAGLSYRF 234
>gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis]
Length = 378
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 24/191 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINC--HTTAA 113
YVG +D + + + G G+ G+ Q D++ +
Sbjct: 36 FYVGGKAGLT----QFSDECGANSLDCEEQSEGFGVYGGY--QALDWLAVEVGYDSLGKS 89
Query: 114 KDDSTFYRLKEKYFIYGDVV--LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
K D + + Y V ++ G D L G F A + +EK S+
Sbjct: 90 KADYSALMKPGEVAHYDATVQGIELGLKADYALTERAGLFAKAGTLLWQVEKSGSE-PGL 148
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ GSS++LG G++Y + + Y+Y SD+
Sbjct: 149 GSVNQEEDGSSLMLGAGVEYRLTEHWNTRLEYQYFNEVG---GEKTGGSDI--------- 196
Query: 232 HIASLGINMHF 242
H +G++ F
Sbjct: 197 HFIGVGLDYRF 207
>gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040805|gb|ACT57601.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 225
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDS------- 142
G+ +G + Q V+G + + +K + G ++ + G++ D+
Sbjct: 80 GVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDK--VAGTLLFRTGFTFDNNNSSILQ 137
Query: 143 -LLIYGMGGFGGAYVIDSSLEKVESDNSKN--AKGRFDGHGSSVVLGIGLDYMVNYDISL 199
LIYG GG ++ +N A G D V+G+G++ + +S+
Sbjct: 138 NTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDK-----VIGVGIEKKLASMLSI 192
Query: 200 SASYRYIPHHIHSVNNSNAKS 220
YRY+ + + S +
Sbjct: 193 RGEYRYVACYDQPWDVSKWRE 213
>gi|260574728|ref|ZP_05842731.1| putative outer membrane protein [Rhodobacter sp. SW2]
gi|259023145|gb|EEW26438.1| putative outer membrane protein [Rhodobacter sp. SW2]
Length = 213
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 18/155 (11%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
WSG Y G + + + T + +G+ +Q + V+G
Sbjct: 46 PTADWSGFYAG--LGYGVSSGDIDFTNPDVANKLDDGHAASAFVGYLVQRDALVYGAELA 103
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
T D +T ++ D+ K GY+ + L YG+ G+ A +
Sbjct: 104 YTGL-DKNTVTGFADEIDQTIDLKGKVGYAANRALFYGVLGYSVASFDTAG--------- 153
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ V G+G+DY+V +++ Y
Sbjct: 154 ------GSWDPAGVNYGLGMDYLVTDRMTVGLEYL 182
>gi|315121798|ref|YP_004062287.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495200|gb|ADR51799.1| outer membrane protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 231
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 23/158 (14%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA--------- 113
I Y + N + G + G+N+Q DF +G +
Sbjct: 59 IEGPYAGMSIFHERNFSGKDHNKDIGGSLFAGYNVQEGDFFYGAEADARYSHDIASKEHK 118
Query: 114 ------KDDSTFYRLKEKYFIYGDVVLKAGYSVDS-LLIYGMGGFGGAYVIDSSLEKVES 166
KDD+ ++ G + + GY + + +++YG G + + +
Sbjct: 119 AARLDQKDDAAVSKMYHAADFSGSLRFRGGYEIAAPVVVYGTVGVAAVHKASKAPADAAA 178
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+K G+G++ ++ +I YR
Sbjct: 179 SPAKAFY-------IGGTAGLGVESVLVDNIIGRVEYR 209
>gi|307246344|ref|ZP_07528422.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307255330|ref|ZP_07537142.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259780|ref|ZP_07541500.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852754|gb|EFM84981.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306861717|gb|EFM93699.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866170|gb|EFM98038.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 369
Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 79/200 (39%), Gaps = 22/200 (11%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
S + G++ + D + N G+ G+ I L FG+
Sbjct: 35 SSFHHGVNQLKSGHDDRYNDKTRKYGINR-NSVTYGVFGGYQI-LNQNNFGLAAELGY-- 90
Query: 115 DDSTFYRLKEKYFIYGDVV---------LKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKV 164
+ R++ + V LK Y V L +YG G V+ + +K
Sbjct: 91 --DYYGRVRGNVDEFRTVKHSAHGLNLALKPSYEVLPDLDVYGKVGIA---VVRNDYKKY 145
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
++N+ + +F +S +LG G++Y + +++ Y+Y+ + +N + +S +
Sbjct: 146 GAENTNESTTKFHKLKASTILGAGVEYAILPELAARVEYQYLNKAGN-LNKALVRSGTQD 204
Query: 225 VDRKG--NAHIASLGINMHF 242
VD + + H + G++ F
Sbjct: 205 VDFQYAPDIHSVTAGLSYRF 224
>gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 371
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 30/192 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 48 YAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSK 170
D+ K + + K GY + D L +Y +GG S++ ++K
Sbjct: 103 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLGGMVWRADTKSNVPGPGGASNK 159
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 160 DHDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN--- 205
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 206 -GLLSVGVSYRF 216
>gi|1136304|gb|AAB06592.1| tia invasion determinant [Escherichia coli ETEC H10407]
Length = 251
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SD S +D + + +G G+ Y V DI+L SYRY+ S++ + +
Sbjct: 170 NESGEISDISALHYSGYD-NNFAWSIGAGVRYDVTPDIALDLSYRYLDAGKSSLSYKDTE 228
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D + + +H LG+ HF
Sbjct: 229 GDKYKSEADVKSHDIMLGVTYHF 251
>gi|45758051|gb|AAO85784.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 19/202 (9%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
D+ Y SG G++ + + GL ELG++ + +
Sbjct: 45 DNTYDYGSGINFGINFGINRNSVTYG-VFGGYQILNQNNFGLATELGYD-----YFGRVR 98
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
+TT + DD + K+ +G + LK Y V +L +YG G + + V+
Sbjct: 99 GNTTFSGDDKE--KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVA----LVRNDYYVQ 152
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHSVNNSNAKSDV 222
K+++ + S++LG GL+Y + +++ Y+Y+ + +V +
Sbjct: 153 QHVDKDSRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIP 212
Query: 223 ERVDRKG--NAHIASLGINMHF 242
+ + + H S G++ F
Sbjct: 213 RGTNFQYSPDIHSVSAGLSYRF 234
>gi|33151318|ref|NP_872671.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
gi|1872470|gb|AAB49273.1| major outer membrane protein [Haemophilus ducreyi]
gi|33147538|gb|AAP95060.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
Length = 403
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVES-DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
+L +YG G G + ++S D + + S++LG G++Y + +++L
Sbjct: 153 NLDVYGKVGMGLVRNDYKFILDLQSKDQHVKDETKLHTLKPSLLLGTGVEYAITPELALR 212
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+Y+ + + K+ + + H S+G++ F
Sbjct: 213 TEYQYLNKAGNLYKAAKYKNISTSLAYAPDIHSVSVGLSYRF 254
>gi|254473179|ref|ZP_05086577.1| outer surface protein [Pseudovibrio sp. JE062]
gi|211957900|gb|EEA93102.1| outer surface protein [Pseudovibrio sp. JE062]
Length = 264
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 79/256 (30%), Gaps = 30/256 (11%)
Query: 6 YGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISR 65
+ L + ++V + + A DL P ++ E + + I G Y+ I
Sbjct: 4 FSNLLSLTAAALVTSSVAYAADLPAPVFVE---------EPELPQIQIGGGWYLRGDIGY 54
Query: 66 LYETHPLADTIN------------------RKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
P + + +N + + ++ + E V ++
Sbjct: 55 KVYKDPKVNFADIEFSNEKLDPTGVVGVGVGYRFNDYIRTDVTLDYEWDSDFEANVPCLS 114
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
D ++ + I + GY + Y G G +YV ++ +
Sbjct: 115 DCVGVTTDSLERAKIDV-WTILWNGYADLGY-FNGFTPYVGAGIGASYVRVKNVNYFNPN 172
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ S L G Y ++ + + A YRY+ + ++ + +
Sbjct: 173 GRAGKYPHGNKWNLSWALMAGTAYDIDENWRIDAGYRYLHIGEVQTKSFDSNGHITGIKY 232
Query: 228 KG-NAHIASLGINMHF 242
AH +G+ F
Sbjct: 233 DNLAAHEVRVGLRYEF 248
>gi|209886118|ref|YP_002289974.1| hypothetical protein OCAR_7002 [Oligotropha carboxidovorans OM5]
gi|209874314|gb|ACI94110.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 493
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 57/216 (26%), Gaps = 26/216 (12%)
Query: 50 EYGIWSGNYVGLHISRLYET-------HPLADTINRKTYNSLLPNGLGIELGHNIQLED- 101
W+G Y+ + T N I G++ Q+
Sbjct: 271 PAYNWTGFYLAGGGGYGMFSADQRSVDTTTGAITGIDTRNGGRGYFGTIAGGYDWQINPT 330
Query: 102 FVFGINCHT------TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGA 154
+V G+ + D + K ++ GY + + L Y GG+ A
Sbjct: 331 WVVGVFGDAQFGDIRGSLSDAGLGVTGRLKNDTNYAAGVRVGYLIAPNALSYVNGGYSHA 390
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPH 208
+ + + H +G G++ +N + YR +
Sbjct: 391 DFKGVT---LTDETGLAVGSTGKSHRDGWFIGGGVENDLNFFGINAPGWFMKTEYRVAEY 447
Query: 209 HIHSVNNSNAKSDVE--RVDRKGNAHIASLGINMHF 242
+ +A + + K + F
Sbjct: 448 SRKTSALYDAAGTLTTDGIAFKPYVQTVQTSLVYRF 483
Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 29/212 (13%)
Query: 50 EYGIWSGNYVGLHISRLY-ETHPLADTINRKTYNSLLPNGLG----IELGHNIQLED-FV 103
W+G YV E A T + G G + +G++ Q+ +V
Sbjct: 48 PVSNWTGFYVSGGFGYGIMEADQHATTSGVASVVDTRMGGRGYFGTVGVGYDYQITPSWV 107
Query: 104 FGINCHTTAAKDDSTFYRLKE------KYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYV 156
G+ + L K + GY V ++L Y G+ A
Sbjct: 108 VGVFGDAQWGDIRGSLMDLNNGITARLKNDAAYAAGARLGYLVAPNVLSYVNVGYSYASF 167
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYRYIPHHI 210
++ + S K+ + +G G++ +N + YR ++
Sbjct: 168 KGTTFDDGVSTIGKSHRD-------GWFIGGGVENDLNFFGINAPGWFMKTEYRVAEYNR 220
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
NS D++ + K S + F
Sbjct: 221 R---NSVYAGDIDGIAFKPYVQTVSTSLVYRF 249
>gi|46203394|ref|ZP_00051591.2| hypothetical protein Magn03005785 [Magnetospirillum magnetotacticum
MS-1]
Length = 299
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 50/188 (26%), Gaps = 57/188 (30%)
Query: 54 WSGNYVGLHISRLYETHP-----------------------LADTINRKTYNSLLPNGLG 90
W+G Y G++ + T + I NS G
Sbjct: 41 WTGFYAGINAGYGFNTRDNNSPTVIGVPASAGVFASSAPALTSGVIAFSNRNSNEGFVGG 100
Query: 91 IELGHNIQLED---FVFGINCHTTAAKDDSTFYRLK----------------------EK 125
++G+N Q FV G+ A R
Sbjct: 101 GQIGYNYQFTPGSGFVIGVEADAQYADFGRNRNRYAFATTTGTGGIIPGTLVYNPSGLSG 160
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+G V + GY+ D L+YG GGF S N +
Sbjct: 161 LDYFGTVRGRLGYAFDRTLVYGTGGFAYGSGGGREFGTGVSSNDFQ---------TGWAA 211
Query: 186 GIGLDYMV 193
G G++Y +
Sbjct: 212 GGGIEYAL 219
>gi|332561456|ref|ZP_08415769.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N]
gi|332273958|gb|EGJ19276.1| hypothetical protein RSWS8N_20484 [Rhodobacter sphaeroides WS8N]
Length = 160
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 48/153 (31%), Gaps = 25/153 (16%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
WSG YVG + + I+ N + G+ G+ V G
Sbjct: 4 PVTDWSGFYVGGQLGYG----DINTDIDGYDGNGAIG---GVHAGYRYDFGRAVVGAELA 56
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + ++ + L AG + L+Y G G + SS D
Sbjct: 57 YDISNIE--IGDADDELDNLATLKLMAGGKIGRGLLYATVG--GTWADVSSDAGDPDD-- 110
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
V GIG D+M+N S+ A
Sbjct: 111 ------------GYVYGIGYDHMLNDRWSIGAE 131
>gi|4579742|dbj|BAA75215.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans]
Length = 346
Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 11/189 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G H L + + G+ G+ I ++F
Sbjct: 28 FYAGAKAGWASSHHGLNQFKQKGVSINRNSEAYGVFGGYQI-TDNFAVEAGYEYFGRSKA 86
Query: 117 STFYRLKEKYFIYGDVVL-KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ ++ +G + KA Y V D+L +Y G GA +I S + N
Sbjct: 87 KVNGAQRFRHTAHGTTLALKASYPVLDNLDVY---GRVGAALIRSDYKV----GQANKPD 139
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERVDRKGNAHI 233
R+ S V G++Y + +++L A Y+++ A +D +
Sbjct: 140 RYHNLKVSPVFAGGVEYAILPELALRAEYQWVSRVGNLGRAEEKADRSARTIDYSPDIGS 199
Query: 234 ASLGINMHF 242
++G++ F
Sbjct: 200 VAVGLSYRF 208
>gi|293390286|ref|ZP_06634620.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290950820|gb|EFE00939.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 346
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 11/189 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G H L + + G+ G+ I ++F
Sbjct: 28 FYAGAKAGWASSHHGLNQFKQKGVSINRNSEAYGVFGGYQI-TDNFAVEAGYEYFGRSKA 86
Query: 117 STFYRLKEKYFIYGDVVL-KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ ++ +G + KA Y V D+L +Y G GA +I S + N
Sbjct: 87 KVNGAQRFRHTAHGTTLALKASYPVLDNLDVY---GRVGAALIRSDYKV----GQANKPD 139
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERVDRKGNAHI 233
R+ S V G++Y + +++L A Y+++ A +D +
Sbjct: 140 RYHNLKVSPVFAGGVEYAILPELALRAEYQWVSRVGNLGRAEEKADRSARTIDYSPDIGS 199
Query: 234 ASLGINMHF 242
++G++ F
Sbjct: 200 VAVGLSYRF 208
>gi|259415944|ref|ZP_05739864.1| putative outer membrane protein [Silicibacter sp. TrichCH4B]
gi|259347383|gb|EEW59160.1| putative outer membrane protein [Silicibacter sp. TrichCH4B]
Length = 198
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 45/159 (28%), Gaps = 26/159 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
W+G Y GL + L + +++ G+ G+N +V G
Sbjct: 44 TDWTGFYGGLQYGQGEADLSLGGASASEDFDAF-----GVHGGYNHDFGRYVLGGELMYN 98
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D + +AG + + Y G +
Sbjct: 99 DISGD------NGGDGDLTSLRARAGMDLGRFMPYVTAGVSHLSL--------------- 137
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
A G D + G+G +Y+V+ S+ Y
Sbjct: 138 ASGGADISENGFTYGVGAEYLVSERFSVGLEYTKSDFSD 176
>gi|309704068|emb|CBJ03414.1| heat resistant agglutinin 1 [Escherichia coli ETEC H10407]
Length = 248
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SD S +D + + +G G+ Y V DI+L SYRY+ S++ + +
Sbjct: 167 NESGEISDISALHYSGYD-NNFAWSIGAGVRYDVTPDIALDLSYRYLDAGKSSLSYKDTE 225
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D + + +H LG+ HF
Sbjct: 226 GDKYKSEADVKSHDIMLGVTYHF 248
>gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469]
gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC
35469]
Length = 375
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L IY G + V ++ KN
Sbjct: 108 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDT 167
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G+++ + +I+ Y++ + N +A + R D +
Sbjct: 168 -----GVSPVFAGGVEWAITPEIATRLEYQW------TNNIGDANTIGTRPDN----GLL 212
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 213 SLGVSYRF 220
>gi|261868235|ref|YP_003256157.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|2828561|gb|AAC00068.1| outer membrane protein 34 [Aggregatibacter actinomycetemcomitans]
gi|261413567|gb|ACX82938.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 346
Score = 48.3 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 11/189 (5%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G H L + + G+ G+ I ++F
Sbjct: 28 FYAGAKAGWASSHHGLNQFKQKGVSINRNSEAYGVFGGYQI-TDNFAVEAGYEYFGRSKA 86
Query: 117 STFYRLKEKYFIYGDVVL-KAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ ++ +G + KA Y V D+L +Y G GA +I S + N
Sbjct: 87 KVNGAQRFRHTAHGTTLALKASYPVLDNLDVY---GRVGAALIRSDYKV----GQANKPD 139
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERVDRKGNAHI 233
R+ S V G++Y + +++L A Y+++ A +D +
Sbjct: 140 RYHNLKVSPVFAGGVEYAILPELALRAEYQWVSRVGNLGRAEEKADRSARTIDYSPDIGS 199
Query: 234 ASLGINMHF 242
++G++ F
Sbjct: 200 VAVGLSYRF 208
>gi|209964175|ref|YP_002297090.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
gi|209957641|gb|ACI98277.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
Length = 356
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 27/204 (13%)
Query: 55 SGNYVGLHISRLYETH-PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
G Y+G+ + + + R L +E G+ +L + GI
Sbjct: 26 EGPYLGVQGGYTWAKDIEASLSTVRNDIELKDGYTLLVEGGY--RLGN---GIRAGVEIG 80
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ +ST I G + +AG + D MG + S + A
Sbjct: 81 RSESTI------GDIAGGLPGRAGGAGDVSAWTFMGVLYYEFAGMSRFRPYLGVGAGMAS 134
Query: 174 GRF---------------DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
D + L G+ Y ++ + L+ YR++ + + A
Sbjct: 135 VGLNDAGELFAPGLIVDEDDRAVAWQLAAGVSYALSPTLDLTLGYRFLDTGTVKIRAAGA 194
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
VD +H A +G+ F
Sbjct: 195 GLGSAPVDFDYQSHTALVGLRWTF 218
>gi|260431608|ref|ZP_05785579.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415436|gb|EEX08695.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 179
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 29/181 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
G W+G Y G I D + GI LG++ L D+V G
Sbjct: 27 GDWTGFYGGAQIGYA-------DIDTNLSGVDGDGVIGGIILGYDYDLGDWVVGGGFDYD 79
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+ D + E + + +AGY V+ L+YG+ G+
Sbjct: 80 WSDIDLSGAATVEDVW---RLKARAGYKVNPQGLLYGVAGYA------------------ 118
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
A G +G G + +V ++S++ Y + + + +V
Sbjct: 119 EAGTDTLGSDDGWFVGAGYEQIVAPNVSIAGEVLYHEFDDFNSTGVDVDATTIQVRAAYR 178
Query: 231 A 231
Sbjct: 179 F 179
>gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
Length = 375
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G + V ++ KN
Sbjct: 108 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKNHDT 167
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G+++ + +I+ Y++ + N +A + R D +
Sbjct: 168 -----GVSPVFAGGVEWAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GLL 212
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 213 SLGVSYRF 220
>gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia
fergusonii B253]
gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227]
Length = 359
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L IY G + V ++ KN
Sbjct: 92 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDT 151
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G+++ + +I+ Y++ + N +A + R D +
Sbjct: 152 -----GVSPVFAGGVEWAITPEIATRLEYQW------TNNIGDANTIGTRPDN----GLL 196
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 197 SLGVSYRF 204
>gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89]
gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89]
gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
Length = 375
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 58 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 112
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 113 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 161
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 162 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 211
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 212 LSLGVSYRF 220
>gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 369
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 48 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+T K + + K GY + D L +Y G +S+
Sbjct: 103 YKGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 153
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 154 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 203
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 204 GLLSVGVSYRF 214
>gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
Length = 344
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 20/165 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+ YVG+ Y + + + G G+ +G++I + + I
Sbjct: 30 TSIYVGIRAGYSYNEGSCSSNHLKCDKSD---TGYGLFIGYDI---NPRWAIETSFNDIG 83
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D + Y + + Y+ +L +YG G
Sbjct: 84 DTTATYSNAHLDGDLSQIDISVKYAYPIYQNLSLYGKVGAAYWDAKAKGQN--------- 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
F G S +LG GL+ +++ Y+YI +++
Sbjct: 135 --VSFSDTGVSPLLGAGLELIISEHWKGRIEYQYIDRIGNNLMGK 177
>gi|330809271|ref|YP_004353733.1| hypothetical protein PSEBR_a2449 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377379|gb|AEA68729.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 232
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 9/143 (6%)
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVI 157
Q + V+ ++ + ++ ++ Y GG G A +
Sbjct: 97 QFNNRVYEGGSSIEGKGEEEASSLMANLWYDVSNLPA----PFSRFTPYVGGGLGYAVLT 152
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
LE + + S+ LG G+ Y ++ S+S YRY +
Sbjct: 153 IKGLEAGGVEFGGTHRDTV----SAWQLGAGVAYELSDHWSMSLDYRYFKTGEANYGKIQ 208
Query: 218 AKSDVERVDRKGNAHIASLGINM 240
+ V + NA LG+
Sbjct: 209 GLVPAD-VKTEYNAQSLMLGLRY 230
>gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli]
Length = 346
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
+K Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVKNGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|86748435|ref|YP_484931.1| hypothetical protein RPB_1310 [Rhodopseudomonas palustris HaA2]
gi|86571463|gb|ABD06020.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 265
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 51/201 (25%), Gaps = 49/201 (24%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRK----------------------TYNSLLPNGLGI 91
W G YVG + +S G G
Sbjct: 43 WQGFYVGGQAGTGASDMDFTNATQGAVATLLTNTVIQNTMAVSDWPVLGKSSSRGQGWGG 102
Query: 92 ELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKYFIY---------------GD 131
+G+N Q +D V GI + Y G
Sbjct: 103 FVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRIFSTGGVTYDVDYNAAASIKVNDVGS 162
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-------SVV 184
L+AG+++ S L Y GG ++ A +
Sbjct: 163 ARLRAGWAIGSFLPYAFGGVALGQADIVRTARISGTQGGTAFTPLVSNLVQNSHFIYGYS 222
Query: 185 LGIGLDYMVNYDISLSASYRY 205
G+G+D M+ + + A + Y
Sbjct: 223 GGLGVDMMLYRGLFVRAEWEY 243
>gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1]
gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1]
Length = 370
Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 108 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 156
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 157 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 206
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 207 LSLGVSYRF 215
>gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 358
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 37 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+T K + + K GY + D L +Y G +S+
Sbjct: 92 YKGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 142
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 143 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GLLSVGVSYRF 203
>gi|45758061|gb|AAO85789.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 373
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 19/191 (9%)
Query: 60 GLHISRLYE---THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
G S Y + GL ELG++ + + +TT A DD
Sbjct: 50 GGEFSIQYGINRNSVTYGVFGGYQILNQNNFGLATELGYD-----YFGRVRGNTTFAGDD 104
Query: 117 STFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ K+ +G + LK Y V +L +YG G + + V+ +K+++
Sbjct: 105 KE--KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVA----LVRNDYYVQQRVAKDSRI 158
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHSVNNSNAKSDVERVDRKGNA 231
+ S++LG GL+Y + +++ Y+Y+ + +V + + +
Sbjct: 159 KAHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRKTVSLPTGTNFQYSPDI 218
Query: 232 HIASLGINMHF 242
H S G++ F
Sbjct: 219 HSVSAGLSYRF 229
>gi|126735685|ref|ZP_01751430.1| possible outer membrane protein [Roseobacter sp. CCS2]
gi|126714872|gb|EBA11738.1| possible outer membrane protein [Roseobacter sp. CCS2]
Length = 205
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 39/165 (23%), Gaps = 24/165 (14%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y G + + G G+ +V G
Sbjct: 51 DWTGFYAGAQLGYGV-------VEADALSDDGEDLTYGAHAGYLYDFGSWVLGGELDLDG 103
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + L+ GY L Y GG D A
Sbjct: 104 TEISQDGIDVDTVT----RAKLRLGYDAGDFLPYITGGVAQLRTSSDDDTFDGDDTGGFA 159
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
G+GL+Y V+ I + ++ + +
Sbjct: 160 -------------GLGLEYRVSPTIRVGGEVLQHQFEDYNGSGED 191
>gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 369
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 63/191 (32%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 48 YAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G +S+
Sbjct: 103 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 153
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 154 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 203
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 204 GLLSVGVSYRF 214
>gi|312270745|gb|ADQ55773.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAKAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736]
gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736]
Length = 370
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 108 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 156
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 157 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 206
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 207 LSLGVSYRF 215
>gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
Length = 351
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L IY G + V ++ KN
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDT 143
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G+++ + +I+ Y++ + N +A + R D +
Sbjct: 144 -----GVSPVFAGGVEWAITPEIATRLEYQW------TNNIGDANTIGTRPDN----GLL 188
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 189 SLGVSYRF 196
>gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280]
gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280]
Length = 370
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G G + D+ ++
Sbjct: 108 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNFDGKNHDT---- 162
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 163 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 207
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 208 SLGVSYRF 215
>gi|299773283|gb|ADJ38716.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 72/193 (37%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G + + K +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGPA----LVRNDYKRSTQTG 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++L Y+++ + + ++ +
Sbjct: 150 GAPPQKAHNLQTSLVLGAGVEYAILPELALRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5]
gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5]
Length = 358
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 62/191 (32%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G +S+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 142
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 143 ASTKDHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GMLSLGVSYRF 203
>gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1]
gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1]
Length = 353
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 36 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 90
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 91 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 139
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 140 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 189
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 190 LSLGVSYRF 198
>gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C]
Length = 365
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 48 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G G + D+ ++
Sbjct: 103 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNFDGKNHDT---- 157
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 158 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 202
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 203 SLGVSYRF 210
>gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146]
Length = 365
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 48 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 103 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 151
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 152 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 201
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 202 LSLGVSYRF 210
>gi|89052837|ref|YP_508288.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1]
gi|88862386|gb|ABD53263.1| hypothetical protein Jann_0346 [Jannaschia sp. CCS1]
Length = 196
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 14/164 (8%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
LP F G W+G ++G+ + + D+ + L
Sbjct: 4 FLLPLLAMAFASPVAAQSSLPSSEGGWAGGHLGIQLGMPISSSLTFDSAP-GIESELDGM 62
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK-----DDSTFYRLKEKYFIYGDVVLKAGYSVDS 142
G+++G Q FV+G ++ + ++ G +AGY +
Sbjct: 63 SGGVQIGFRRQTNAFVYGGEAAFLVSEPVIEQMGAPDVDVRVTTTRLG---AQAGYDLGR 119
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
L YG G V + + ++ G F G G LG
Sbjct: 120 FLPYGTLG-----VARMTFQDTVGFGDTSSFGTFAGLGVEYQLG 158
>gi|331685335|ref|ZP_08385921.1| adhesin/virulence factor Hek [Escherichia coli H299]
gi|323939576|gb|EGB35782.1| tia protein [Escherichia coli E482]
gi|331077706|gb|EGI48918.1| adhesin/virulence factor Hek [Escherichia coli H299]
Length = 248
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SD S +D + + +G G+ Y V DI+L SYRY+ S++ + +
Sbjct: 167 NESGEISDISALHYSGYD-NNFAWSIGAGVRYDVTPDIALDLSYRYLDAGKSSLSYKDTE 225
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D + + +H G+ HF
Sbjct: 226 GDKYKSEADVKSHDIMFGVTYHF 248
>gi|326387223|ref|ZP_08208833.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208404|gb|EGD59211.1| hypothetical protein Y88_1273 [Novosphingobium nitrogenifigens DSM
19370]
Length = 241
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 16/173 (9%)
Query: 79 KTYNSLLPNGLGIELGHNIQLEDF-VFGINCHTTAAKDD-------STFYRLKEKYFIYG 130
+NS G +G++ L V G T + D STF + +
Sbjct: 76 NFFNSANGVAYGGGIGYDYTLNPTMVLGAEFDVTGSTADWKNPNVSSTFNMTRMRVGRDI 135
Query: 131 DVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ + G+ ++ L Y GF + + + + +D + S + G G+
Sbjct: 136 FLGGRFGFLLNPKNLFYVKAGFA-------NTQFSITGENTGETLHYDSNSSGLRFGFGV 188
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + Y Y + N D K + H I F
Sbjct: 189 QHRLTKKTYAKIEYDYSHYGSGQFNYKGTTPDASYFALKNDRHQLMASIGFKF 241
>gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3]
gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1]
Length = 354
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G G + D+ ++
Sbjct: 92 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNFDGKNHDT---- 146
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 147 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 191
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 192 SLGVSYRF 199
>gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75]
gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75]
Length = 346
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 64/189 (33%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
+K Y G + K GY + D L +Y +GG +D N
Sbjct: 84 YKGSVKNGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|118588319|ref|ZP_01545728.1| probable heat resistant agglutinin 1 protein [Stappia aggregata IAM
12614]
gi|118439025|gb|EAV45657.1| probable heat resistant agglutinin 1 protein [Stappia aggregata IAM
12614]
Length = 256
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Query: 139 SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
+ + + Y G G +YV S++ V + + L G Y + +++
Sbjct: 130 TWNRITPYVGAGVGASYVTTSNINFVNPNGVAGTYEGDSKWNFAWALMAGASYDITPNLA 189
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKG-NAHIASLGINMHF 242
L A YRY+ + R++ + AH LG F
Sbjct: 190 LDAGYRYLNIGDAHSAKFSTAGQNTRIEYEDLQAHEFRLGARYTF 234
>gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 358
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G +S+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNTPGG 142
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 143 ASYKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GLLSVGVSYRF 203
>gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor
gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 350
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+T K + + K GY + D L +Y G +S+
Sbjct: 84 YKGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 135 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617]
gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae]
gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617]
Length = 351
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G + V ++ KN
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKNHDT 143
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G+++ + +I+ Y++ + N +A + R D +
Sbjct: 144 -----GVSPVFAGGVEWAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GLL 188
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 189 SLGVSYRF 196
>gi|148255369|ref|YP_001239954.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
BTAi1]
gi|146407542|gb|ABQ36048.1| putative outer-membrane immunogenic protein precursor
[Bradyrhizobium sp. BTAi1]
Length = 262
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 57/221 (25%), Gaps = 37/221 (16%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
L V + + A DL A W+G Y+
Sbjct: 4 LLLAVTAMAAMTGTASAADLAARPYTKAPIAAPLAPS--------WTGFYIFGGGGGGLW 55
Query: 69 THPLADT--------INRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAKDDSTF 119
I + G++ Q+ +V G T
Sbjct: 56 NADTTINSTATGAALIGLNQKQGGEGWFGTVGAGYDWQVNPTWVIGAFADGQFGSIKGTI 115
Query: 120 --------YRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGA-YVIDSSLEKVESDNS 169
+K Y V + GY V ++L Y G+ + + + L V S
Sbjct: 116 QDQGALIAGNIKNDYSW--AVGGRVGYLVAPNVLSYVNAGYSSSHWKGTTLLSTVTGGAS 173
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYR 204
FD S +G G++ +N + YR
Sbjct: 174 GLHTDGFD--RSGWFIGGGVENNLNIFGISAPGWFMKTEYR 212
>gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3]
Length = 354
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 92 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 140
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 141 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 190
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 191 LSLGVSYRF 199
>gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 374
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 80/202 (39%), Gaps = 23/202 (11%)
Query: 48 DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
D+ Y SG +G++ + + + GL ELG++ + +
Sbjct: 45 DNTYDYGSGINLGINRNSVTYG-----VFGGYQILNQNNFGLATELGYD-----YFGRVR 94
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
+TT + DD + K+ +G + LK Y V +L +YG G + V+
Sbjct: 95 GNTTFSGDDKE--KTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVD 152
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHSVNNSNAKSDV 222
D ++ + S++LG GL+Y + +++ Y+Y+ + +V +
Sbjct: 153 KD----SRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIP 208
Query: 223 ERVDRKG--NAHIASLGINMHF 242
+ + + H S G++ F
Sbjct: 209 RGTNFQYSPDIHSVSAGLSYRF 230
>gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82]
gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74]
Length = 351
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G + V ++ KN
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKNHDT 143
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G+++ + +I+ Y++ + N +A + R D +
Sbjct: 144 -----GVSPVFAGGVEWAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GLL 188
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 189 SLGVSYRF 196
>gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739]
gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B]
gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736]
gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli ATCC 8739]
gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101]
gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89]
gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW
07815]
Length = 365
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 48 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 103 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 151
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 152 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 201
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 202 LSLGVSYRF 210
>gi|148555704|ref|YP_001263286.1| opacity protein and related surface antigens-like protein
[Sphingomonas wittichii RW1]
gi|148500894|gb|ABQ69148.1| Opacity protein and related surface antigens-like protein
[Sphingomonas wittichii RW1]
Length = 188
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 15/135 (11%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-------- 141
G+ G++ Q+ V G+ + + S + Y
Sbjct: 52 GLGAGYDFQMGGAVLGVEAEASDSSAKSCIGSATAADPRLCAKAGRDLYVGGRVGTVVGG 111
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L+Y G+ A + + R G+ V +G G++Y + + + A
Sbjct: 112 KALLYAKAGYTNARAKATLDDG-------TTVLRDSGNYDGVRVGAGVEYALGTNAYVKA 164
Query: 202 SYRYIPHHIHSVNNS 216
YRY + N
Sbjct: 165 EYRYSNYEQGFSRNQ 179
>gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli]
Length = 354
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G G + D+ ++
Sbjct: 92 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNFDGKNHDT---- 146
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 147 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 191
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 192 SLGVSYRF 199
>gi|163854233|ref|YP_001642276.1| hypothetical protein Mext_4837 [Methylobacterium extorquens PA1]
gi|163665838|gb|ABY33205.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 287
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 56/194 (28%), Gaps = 27/194 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNS-----LLPNGLGIELGHNIQLEDFVFGINCHTT 111
++G + D + S G G+N+ F +
Sbjct: 92 YFIGGGVGYQINPWLRVDATGEYRFRSKWTFVAEDKTFGDTGGYNLTSGKF----DSIVG 147
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A G V A +S + G G + G Y I N
Sbjct: 148 LANGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGFGAYEGGYGI----------GRHN 197
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV---DRK 228
+ F + L GL Y V +I A+YRY+ + D + ++
Sbjct: 198 ERTNF-----AWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCPKTVYRVKE 252
Query: 229 GNAHIASLGINMHF 242
+AH +G+ F
Sbjct: 253 LDAHDVKVGLRYLF 266
>gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101]
gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101]
Length = 365
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 48 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G G + D+ ++
Sbjct: 103 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNFDGKNHDT---- 157
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 158 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 202
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 203 SLGVSYRF 210
>gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3]
gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1125]
Length = 354
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 92 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 140
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 141 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 190
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 191 LSLGVSYRF 199
>gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39]
gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605]
gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39]
gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605]
Length = 374
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 108 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 163
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 164 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 208
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 209 GMLSLGVSYRF 219
>gi|299773281|gb|ADJ38715.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTG 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|219872299|ref|YP_002476674.1| outer membrane protein P5 , heat-modifiable outer membrane protein
[Haemophilus parasuis SH0165]
gi|219692503|gb|ACL33726.1| outer membrane protein P5 precursor, heat-modifiable outer membrane
protein [Haemophilus parasuis SH0165]
gi|253807583|gb|ACT36164.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270777|gb|ADQ55789.1| OmpA [Haemophilus parasuis]
gi|312270779|gb|ADQ55790.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 14/197 (7%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
+ +S+VLG G++Y + +++ Y+++ ++ + + D
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 209
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 210 TYSPDAHSVSAGISYRF 226
>gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073]
gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073]
Length = 379
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 58 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 112
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 113 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 168
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 169 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 213
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 214 GMLSLGVSYRF 224
>gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1]
gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1]
Length = 354
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 92 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 140
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 141 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 190
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 191 LSLGVSYRF 199
>gi|224714275|gb|ACN62132.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQKFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|209968934|gb|ACJ02828.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831779|gb|ACJ23249.2| OmpA [Haemophilus parasuis]
gi|224714293|gb|ACN62141.1| outer membrane protein A [Haemophilus parasuis]
gi|224714317|gb|ACN62153.1| outer membrane protein A [Haemophilus parasuis]
gi|224714319|gb|ACN62154.1| outer membrane protein A [Haemophilus parasuis]
gi|224714321|gb|ACN62155.1| outer membrane protein A [Haemophilus parasuis]
gi|224714335|gb|ACN62162.1| outer membrane protein A [Haemophilus parasuis]
gi|299773259|gb|ADJ38704.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773265|gb|ADJ38707.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773271|gb|ADJ38710.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773273|gb|ADJ38711.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773275|gb|ADJ38712.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773279|gb|ADJ38714.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773287|gb|ADJ38718.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270747|gb|ADQ55774.1| OmpA [Haemophilus parasuis]
gi|312270749|gb|ADQ55775.1| OmpA [Haemophilus parasuis]
gi|312270753|gb|ADQ55777.1| OmpA [Haemophilus parasuis]
gi|312270755|gb|ADQ55778.1| OmpA [Haemophilus parasuis]
gi|312270757|gb|ADQ55779.1| OmpA [Haemophilus parasuis]
gi|312270759|gb|ADQ55780.1| OmpA [Haemophilus parasuis]
gi|312270761|gb|ADQ55781.1| OmpA [Haemophilus parasuis]
gi|312270763|gb|ADQ55782.1| OmpA [Haemophilus parasuis]
gi|312270765|gb|ADQ55783.1| OmpA [Haemophilus parasuis]
gi|312270767|gb|ADQ55784.1| OmpA [Haemophilus parasuis]
gi|312270769|gb|ADQ55785.1| OmpA [Haemophilus parasuis]
gi|312270771|gb|ADQ55786.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 356
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 55/191 (28%), Gaps = 32/191 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGI----NCHTT 111
Y+G +++ + N + G G G+ Q F +
Sbjct: 43 FYLGAKAGQMHYQNACESWSVSCDGNYV---GFGGFAGYQAWQYLGFETAYLDLGEAVSG 99
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ + V + G S D L G F + DN
Sbjct: 100 YSESAVNNTYVGSMKGWELSAVTRFGLSEDFELFAKAGSFYW-----------DGDNQGP 148
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
D G + +LG GL Y ++ Y+YI + N
Sbjct: 149 YSRNSD-SGWAPMLGAGLAYQISPSWVARLEYQYIDKLGSDLIGG------------SNG 195
Query: 232 HIASLGINMHF 242
H+ +LGI+ F
Sbjct: 196 HLTTLGISYRF 206
>gi|299773285|gb|ADJ38717.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 369
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 48 YAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 103 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 158
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 159 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 203
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 204 GLLSVGVSYRF 214
>gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536]
gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206]
gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536]
gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82]
gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206]
Length = 346
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G G + D+ ++
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNFDGKNHDT---- 138
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 139 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 183
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 184 SLGVSYRF 191
>gi|323969105|gb|EGB64410.1| tia protein [Escherichia coli TA007]
Length = 248
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
SD S +D + + +G G+ Y V DI+L SYRY+ S++ + + D +
Sbjct: 173 SDISALHYSGYD-NNFAWSIGAGVRYDVTPDIALDLSYRYLDAGKSSLSYKDTEGDKYKS 231
Query: 226 DRKGNAHIASLGINMHF 242
+ +H G+ HF
Sbjct: 232 EADVKSHDIMFGVTYHF 248
>gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 358
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YAGAKLG--WSQYHDTGFINNDGPTDENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GLLSVGVSYRF 203
>gi|27379465|ref|NP_770994.1| hypothetical protein bll4354 [Bradyrhizobium japonicum USDA 110]
gi|27352617|dbj|BAC49619.1| bll4354 [Bradyrhizobium japonicum USDA 110]
Length = 279
Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 63/220 (28%), Gaps = 38/220 (17%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
+ + + + A DL + A W+G Y+
Sbjct: 23 ILLALTAVAAMTGSASAADLAARPYVKAPMAA---------PVANWTGFYIFGGGGGGLS 73
Query: 69 THPLA----------DTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHTTAAKDDS 117
+ R+ + + LG++ Q +V G+ +
Sbjct: 74 NADQSVVDTVTGTPLTITQRQGGSGWFGT---VGLGYDWQFSGTWVAGVFADGQFGSIRA 130
Query: 118 T------FYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
T +K ++ G+ V ++L Y GG+ GA+ ++ +
Sbjct: 131 TIQDPIFGITGNQKLEDSWAAGVRLGWLVAPNVLSYVNGGYSGAHFGQTNFTDLAGVPVG 190
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYR 204
++ + +G G++ +N + YR
Sbjct: 191 AHLASYNRN--GWFIGGGVENSLNIFGITSPGWFMKTEYR 228
>gi|148253343|ref|YP_001237928.1| hypothetical protein BBta_1819 [Bradyrhizobium sp. BTAi1]
gi|146405516|gb|ABQ34022.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 302
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 67/267 (25%), Gaps = 75/267 (28%)
Query: 17 IVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTI 76
+ V + DL E + W G YVG + +
Sbjct: 15 MAVSVFGMVSAAQAADMPDLPVLRGGLTEGLNGARANWDGYYVGGQFGYGTSDMDFSRSA 74
Query: 77 NRKT--------------------YNSLLPNGLGIELGHNIQLEDFVFGINCH------- 109
T N + + G+ +G N Q ED V+GI +
Sbjct: 75 ASLTNFIFRNSVLQTPTSTWSVLNKNHVQGSSFGVYVGRNFQWEDTVWGIEVNYNYMNRM 134
Query: 110 TTAAKDDSTFYRLKEKYFIYG-----------------------DVVLKAGYSVDSLLIY 146
+++ + + + G++ D+ L Y
Sbjct: 135 VSSSGSSMALNIVNPSGETVAANETRTYSTSVQAAAALQIKDVVTLRGRVGWAADNFLPY 194
Query: 147 GMGGFG-------------------------GAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
GG GA + + + S + + R +
Sbjct: 195 VFGGLAVGRMETSRVATTNVYLTDTFVNQTTGAIISQTGPSYLPSVSRTYGESRTNSFVG 254
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPH 208
G+G +YM+ + + Y+
Sbjct: 255 GWTGGLGFEYMMWGGLFARGEWEYVKF 281
>gi|90408691|ref|ZP_01216841.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90310205|gb|EAS38340.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 415
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 60/192 (31%), Gaps = 38/192 (19%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVGL + + + G G G+ Q + F + T S
Sbjct: 87 YVGLRGGGANFEKACSS---GSSKCNDDTLGYGFYGGY--QFTSW-FALEAALTDYGSIS 140
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
Y K + + S L G + +S + S +
Sbjct: 141 ATYYGTNKVSVE---------TWGSEL----SGVFSYDLFESLDAYLRVGASYQHAHKES 187
Query: 178 GHGSSVVLG-------IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ ++G +GLDY ++ SL Y++I K+D+ V +
Sbjct: 188 IWPTEELVGDWGVVSAVGLDYRLSTSWSLRGEYQFID--------DTGKNDLTHV----D 235
Query: 231 AHIASLGINMHF 242
H SLG+ HF
Sbjct: 236 VHFVSLGLTYHF 247
>gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
Length = 342
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 20 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 74
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G + V ++ KN
Sbjct: 75 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADTKAHNNVTGESEKNHDT 134
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G+++ + +I+ Y++ + N +A + R D +
Sbjct: 135 -----GVSPVFAGGVEWAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GLL 179
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 180 SLGVSYRF 187
>gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88]
gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218]
gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88]
gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034]
gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli
H252]
gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli
H263]
Length = 346
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|330908612|gb|EGH37131.1| peptide transport periplasmic protein sapA [Escherichia coli AA86]
Length = 248
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SD S+ +D + + +G G+ Y V DI+L SYRY+ S++ +A+
Sbjct: 167 NESGEISDISELHYSGYD-NNFAWSIGAGVRYDVTPDIALDLSYRYLDAGKSSLSYKDAE 225
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D + + +H G+ +F
Sbjct: 226 EDKYKSEVDVKSHDIMFGVTYNF 248
>gi|299773261|gb|ADJ38705.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773267|gb|ADJ38708.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|307250689|ref|ZP_07532626.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857297|gb|EFM89416.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 368
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 17/198 (8%)
Query: 54 WSGNYVGL-HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT- 111
W+ + G+ + Y + + G+ G+ I L FG+
Sbjct: 34 WATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVTYGVFGGYQI-LNQNNFGLATELGY 92
Query: 112 -----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D F +K + + + +L +YG G +K E
Sbjct: 93 DYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRNDYKEYDK-EE 151
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
K K + +S +LG G++Y + +++ Y+Y+ + +N + +S + VD
Sbjct: 152 PTEKTHKLK-----ASTILGAGVEYAILPELAARVEYQYLNKAGN-LNKALVRSGTQDVD 205
Query: 227 RKG--NAHIASLGINMHF 242
+ + H + G++ F
Sbjct: 206 FQYAPDIHSVTAGLSYRF 223
>gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 358
Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GLLSVGVSYRF 203
>gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 356
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 67/218 (30%), Gaps = 32/218 (14%)
Query: 28 LYLPRKIDLFNEADNNVEYQD-DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLP 86
LYL E DN+ + D Y Y+G +++ + N +
Sbjct: 18 LYLSLGAVYAAETDNSEAANEFDPY-----FYLGAKAGQMHYQNACESWSISCDGNDV-- 70
Query: 87 NGLGIELGHN-IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY-GDVVLKAGYSVDSLL 144
G G +G+ Q G + Y Y G + G+ + ++
Sbjct: 71 -GFGGFVGYQAWQY----LGFETAYLDLGEAVAHYSESGVNNTYTGSMK---GWEISAVT 122
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ + + S+ + ++ +LG G++Y ++ Y+
Sbjct: 123 RFSLSESFELFAKAGSVYWDGDNRGPQSRNSDSDWAP--MLGAGVEYQLSPSWVARLEYQ 180
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI + N H+ +LGI+ F
Sbjct: 181 YIDSLGSDLIGG------------SNGHLTTLGISYRF 206
>gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1]
gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591]
gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1]
gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591]
Length = 374
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 108 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 163
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 164 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 208
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 209 GLLSLGVSYRF 219
>gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii]
Length = 346
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407]
Length = 346
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|165976856|ref|YP_001652449.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303253773|ref|ZP_07339908.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248471|ref|ZP_07530491.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307257499|ref|ZP_07539265.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|165876957|gb|ABY70005.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302647357|gb|EFL77578.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855039|gb|EFM87222.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306864011|gb|EFM95928.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 368
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 17/198 (8%)
Query: 54 WSGNYVGL-HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT- 111
W+ + G+ + Y + + G+ G+ I L FG+
Sbjct: 34 WATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVTYGVFGGYQI-LNQNNFGLATELGY 92
Query: 112 -----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D F +K + + + +L +YG G +K E
Sbjct: 93 DYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRNDYKEYDK-EE 151
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
K K + +S +LG G++Y + +++ Y+Y+ + +N + +S + VD
Sbjct: 152 PTEKTHKLK-----ASTILGAGVEYAILPELAARIEYQYLNKAGN-LNKALVRSGTQDVD 205
Query: 227 RKG--NAHIASLGINMHF 242
+ + H + G++ F
Sbjct: 206 FQYAPDIHSVTAGLSYRF 223
>gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933]
gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai]
gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046]
gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. W3110]
gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS]
gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11]
gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989]
gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606]
gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359]
gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000]
gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966]
gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70]
gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str.
EDL933]
gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli]
gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12
substr. W3110]
gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai]
gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei]
gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046]
gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS]
gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli]
gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli]
gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli]
gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli]
gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli]
gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11]
gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989]
gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)]
gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str.
REL606]
gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)]
gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7
str. TW14359]
gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli DH1]
gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70]
gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W]
gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli DH1]
gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687]
gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905]
gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61]
gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14]
gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010]
gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68]
gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180]
gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357]
gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1520]
gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli
E482]
gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli
H120]
gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli
H489]
gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli
TA007]
gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1167]
Length = 346
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 358
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 37 YAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GLLSVGVSYRF 203
>gi|126208885|ref|YP_001054110.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae L20]
gi|126097677|gb|ABN74505.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 368
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 17/198 (8%)
Query: 54 WSGNYVGL-HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT- 111
W+ + G+ + Y + + G+ G+ I L FG+
Sbjct: 34 WATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVAYGVFGGYQI-LNQNNFGLATELGY 92
Query: 112 -----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D F +K + + + +L +YG G +K E
Sbjct: 93 DYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRNDYKEYDK-EE 151
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
K K + +S +LG G++Y + +++ Y+Y+ + +N + +S + VD
Sbjct: 152 PTEKTHKLK-----ASTILGAGVEYAILPEVAARVEYQYLNKAGN-LNKALVRSGTQDVD 205
Query: 227 RKG--NAHIASLGINMHF 242
+ + H + G++ F
Sbjct: 206 FQYAPDIHSVTAGLSYRF 223
>gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143]
gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299]
gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143]
gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299]
Length = 346
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L +Y G G + D+ ++
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNFDGKNHDT---- 138
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 139 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 183
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 184 SLGVSYRF 191
>gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi]
gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi]
gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi]
gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi]
Length = 360
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 15/193 (7%)
Query: 54 WSGNYVGL----HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
W+ + G+ H + + + L E+G+ V G+
Sbjct: 35 WASFHDGISQIDHKNGGKYGINKNSVTYGAFVGYQIIDNLAAEVGYEY-FGR-VRGLEQT 92
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ ++ +G + G + +I G+ + A + + +
Sbjct: 93 KAG------GSKKTFRHSAHGTTIALKG---NYEVISGLDTYAKAGIALVNNSYKTVNVD 143
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ SS++LG G++Y + + Y+++ + + + + VE D +
Sbjct: 144 TKVPTKTSRFQSSLILGAGVEYAITPSLGARIEYQWLNNAGKASYATLRRMGVEGSDYRP 203
Query: 230 NAHIASLGINMHF 242
+ S G+ F
Sbjct: 204 DISSVSAGLTYRF 216
>gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026]
gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302]
gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli]
gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026]
gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302]
Length = 346
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|39937375|ref|NP_949651.1| hypothetical protein RPA4315 [Rhodopseudomonas palustris CGA009]
gi|39651233|emb|CAE29756.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 275
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 61/205 (29%), Gaps = 48/205 (23%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINR----------------------KTYNSLLP 86
W G YVG ++ +S
Sbjct: 49 PRVINWEGFYVGGQGGYGTSDMDFTNSTQGIVSNLLVNTAVQGALGVSSWPVLGKSSSHG 108
Query: 87 NGLGIELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKYFIYGDV--------- 132
G G +G+N Q +D V GI + + S ++ YG +
Sbjct: 109 QGWGGFVGYNAQWDDVVLGIEANYMHGNFGGSTSGSMARQISSGGVNYGAIYGASAGINV 168
Query: 133 ------VLKAGYSVDSLLIYGMGGFG-GAYVIDSSLEKVESDNSKN-----AKGRFDGHG 180
L+AGY+ S L Y GG G I S + +D ++ +
Sbjct: 169 HDVGSARLRAGYAFGSFLPYAFGGVALGQADIVQSASVIGTDAGGTWVLSGSQVQNSHFI 228
Query: 181 SSVVLGIGLDYMVNYDISLSASYRY 205
G+G+D M+ + + A + Y
Sbjct: 229 YGYSGGVGMDMMLYRGLFVRAEWEY 253
>gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86]
Length = 358
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GMLSLGVSYRF 203
>gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9]
gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9]
Length = 374
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 53 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 108 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 163
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 164 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 208
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 209 GMLSLGVSYRF 219
>gi|190150781|ref|YP_001969306.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264101|ref|ZP_07545698.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915912|gb|ACE62164.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870579|gb|EFN02326.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 369
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 75/196 (38%), Gaps = 14/196 (7%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT--- 111
S + G++ + D + N G+ G+ I L FG+
Sbjct: 35 SSFHHGVNQLKSGHDDRYNDKTRKYGINR-NSVTYGVFGGYQI-LNQNNFGLATELGYDY 92
Query: 112 ---AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+D F +K + + + L +YG G V+ + + ++N
Sbjct: 93 YGRVRGNDGEFRAMKHSAHGLNFALKPSYEVLPDLDVYGKVGVA---VVRNDYKSYGAEN 149
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ +F +S +LG G++Y + +++ Y+Y+ + +N + +S + VD +
Sbjct: 150 TNEPTEKFHKLKASTILGAGVEYAILPELAARVEYQYLNKAGN-LNKALVRSGTQDVDFQ 208
Query: 229 G--NAHIASLGINMHF 242
+ H + G++ F
Sbjct: 209 YAPDIHSVTAGLSYRF 224
>gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
Length = 346
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENKLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTYSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|323160774|gb|EFZ46709.1| ompA-like transmembrane domain protein [Escherichia coli E128010]
Length = 251
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SD S+ +D + + +G G+ Y V DI+L SYRY+ S++ +A+
Sbjct: 170 NESGEISDISELHYSGYD-NNFAWSIGAGVRYDVTPDIALDLSYRYLDAGKFSLSYKDAE 228
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
D + + +H G+ +F
Sbjct: 229 EDKYKSEVDVKSHDIMFGVTYNF 251
>gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 350
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|254693693|ref|ZP_05155521.1| porin [Brucella abortus bv. 3 str. Tulya]
Length = 81
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ G G+DY ++ + YRY + + + VE K H LG+
Sbjct: 21 TGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNKFKTHDIRLGVAY 79
Query: 241 HF 242
F
Sbjct: 80 KF 81
>gi|209966189|ref|YP_002299104.1| outer membrane protein, putative [Rhodospirillum centenum SW]
gi|209959655|gb|ACJ00292.1| outer membrane protein, putative [Rhodospirillum centenum SW]
Length = 219
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 53/200 (26%), Gaps = 25/200 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNS---LLPNGLGIELGHNIQLEDFVFGINCH--T 110
G Y+G + T+ T G G+ + L G+
Sbjct: 32 GPYIGAFFAYADLDVDARATVGSVTTTGDGSGDGWTFGAYAGYGMSLGPVYAGLEAEYGL 91
Query: 111 TAAKDDSTFYRLKEKYFIYGD--VVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
+ ++ + V + G +D +L+YG G + +
Sbjct: 92 NGSSIGVRAGNIRTSFDAQDSYGVSARLGTVVMDRILVYGRFGRQWT-------QFDVKN 144
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVN-----YDISLSASYRYIPHHIHSVNNSNAKSDV 222
D G G++Y + ++ + Y Y + + A +
Sbjct: 145 TLGTVAIGSDDRLDGWRYGGGVEYALAGPGKGDNMLVRLEYSYFDYDDLATTAQLASTAA 204
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + +G F
Sbjct: 205 Q-----VDESQIRVGFAYRF 219
>gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2]
Length = 354
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 92 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 140
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 141 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 190
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 191 LSLGVSYRF 199
>gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1]
gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1]
Length = 358
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GMLSLGVSYRF 203
>gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431]
Length = 346
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 64/189 (33%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
+ Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVANGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|312270751|gb|ADQ55776.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYAKDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1]
gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1]
Length = 358
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GLLSLGVSYRF 203
>gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9]
Length = 369
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 48 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 103 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 158
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 159 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 203
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 204 GMLSLGVSYRF 214
>gi|71281689|ref|YP_269451.1| putative outer membrane protein [Colwellia psychrerythraea 34H]
gi|71147429|gb|AAZ27902.1| putative outer membrane protein [Colwellia psychrerythraea 34H]
Length = 200
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 67/191 (35%), Gaps = 29/191 (15%)
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY---- 120
+ L ++ Y S G G+ I + +F I +F
Sbjct: 26 NGWYIGALYNSQTISIYQSREFKSAGAIAGYKI---NDIFSIETRLHKGTSGYSFNLLEP 82
Query: 121 -----RLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK---VESDNSKN 171
+ K+ G ++ KA YS+ +Y + G+ ++LE + + S
Sbjct: 83 GFEDKKYKQDLDYQGHILAKASYSITEAFNVYALAGYTKTKTEITTLEFHTDLSGNTSVT 142
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
++ + G+GL+Y + S+ Y+ +P D ++ + G+
Sbjct: 143 YPHQYSENTDGFSYGVGLNYQIYNQFSVFVDYQVLP-------------DFDKYQKSGSW 189
Query: 232 HIASLGINMHF 242
+LG+N F
Sbjct: 190 DSLNLGVNYSF 200
>gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 350
Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YAGAKLG--WSQYHDTGFINNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1]
Length = 358
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GMLSLGVSYRF 203
>gi|163853839|ref|YP_001641882.1| porin [Methylobacterium extorquens PA1]
gi|218532784|ref|YP_002423600.1| porin [Methylobacterium chloromethanicum CM4]
gi|240141293|ref|YP_002965773.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254563802|ref|YP_003070897.1| 31 kDa outer-membrane immunogenic protein [Methylobacterium
extorquens DM4]
gi|163665444|gb|ABY32811.1| porin [Methylobacterium extorquens PA1]
gi|218525087|gb|ACK85672.1| porin [Methylobacterium chloromethanicum CM4]
gi|240011270|gb|ACS42496.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens AM1]
gi|254271080|emb|CAX27087.1| putative 31 kDa outer-membrane immunogenic protein precursor
(omp31) [Methylobacterium extorquens DM4]
Length = 296
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 61/227 (26%), Gaps = 62/227 (27%)
Query: 35 DLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA--DTINRKTYNSLLPNGL--- 89
DL A + W+G Y G + + + + L+ G
Sbjct: 22 DLPRRAAPPPVFTPIPVFTWTGFYAGFNAGYGFGVDDNGAAPVVGVNSLTGLVRPGQTAV 81
Query: 90 --------------GIELGHNIQLED---FVFGINCH---TTAAKDDSTFYRLKE----- 124
G ++G+N Q V GI +D + F
Sbjct: 82 IAFGGNSRSDGFVGGGQIGYNYQFTPGSGVVIGIEADAQYVDFGRDRNQFAVANSNPAFP 141
Query: 125 --------------KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+G V + GY+ D +L YG GGF S +
Sbjct: 142 GVAAQQVFNPNGLSSLDFFGTVRGRLGYAFDRVLFYGTGGFAYGAGGGRQFGLPNSSS-- 199
Query: 171 NAKGRFDGHGSSVVLGIGLDYMV----------NYDISLSASYRYIP 207
D + G G++Y + + ++L Y+
Sbjct: 200 ------DDFRTGYAAGGGVEYALPTDSFLNFFRSSAVTLKVEGLYVN 240
>gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli]
gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli]
gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GLLSLGVSYRF 203
>gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7]
gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7]
Length = 358
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GLLSLGVSYRF 203
>gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69]
gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6
str. E2348/69]
Length = 346
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|260431177|ref|ZP_05785148.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415005|gb|EEX08264.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 254
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 17/152 (11%)
Query: 101 DFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------DVVLKAGYS--VDSLLIYGMGG 150
D+V+G D T R + G V K G + S+L + G
Sbjct: 110 DYVYGFEIGYDFVSMDDTVTREISGTTVRGGSEISDIAAVRFKNGLTNPSGSVLYFVTLG 169
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ +S + ++ D + IG ++ ++ + S++ Y+
Sbjct: 170 LVQGDIKTTSSI---ASSATTTSVENDDRRTGFSASIGAEHQLSENWSITGELEYVQFQS 226
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + S + G+N F
Sbjct: 227 EVIDFGSGIS----TKSTPSYRSLRFGLNYRF 254
>gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
EC1212]
gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B]
gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G]
Length = 337
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 20 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 74
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 75 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 123
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 124 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 173
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 174 LSLGVSYRF 182
>gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 360
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 36/195 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV--------FGINCH 109
Y G + + IN G G G+ Q+ +V G +
Sbjct: 37 YAGAKLGWSQYHDIGNNQINNAGPTHESQLGAGAFGGY--QVNPYVGFEMGYDWLGRMPY 94
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESD 167
+ K + + K GY + D L +Y +GG ++ + D
Sbjct: 95 KGYTDETHNNGAFKAQGV---QLTAKLGYPITDDLDVYTRLGGMVWRADAKNNTGFKDHD 151
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
G S V G++Y + +I+ Y++ + N +A + V
Sbjct: 152 T-----------GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANT----VGG 190
Query: 228 KGNAHIASLGINMHF 242
+ + + S+G++ F
Sbjct: 191 RPDNGLLSVGVSYRF 205
>gi|126090250|ref|YP_001041705.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125999881|gb|ABN63950.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 333
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 32/187 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKD 115
++ + + N K + +GL + + + + T+
Sbjct: 24 FFIEAKGGYQWASDDSYKHSNPKGAIFGVSSGLQFSPAWSWDVGYQYHDDLKADATSVNV 83
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ +Y Y D+L +YG G + + L + +
Sbjct: 84 KAGLIESALRYDW---------YLQDNLSVYGRLGVAYWDMEKTHL----------SSDK 124
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D G S + +G++Y ++ LSA Y+YI S+ SN K ++H
Sbjct: 125 LDATGLSPLGEVGVNYNFTPNVRLSAGYQYID----SIGESN--------TGKYDSHGFL 172
Query: 236 LGINMHF 242
+G+ F
Sbjct: 173 VGLTYAF 179
>gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli
M863]
gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli
TW10509]
gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v]
Length = 350
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GLLSLGVSYRF 195
>gi|312270773|gb|ADQ55787.1| OmpA [Haemophilus parasuis]
gi|312270775|gb|ADQ55788.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 73/197 (37%), Gaps = 14/197 (7%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K + G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G + + K+ S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAA----LVRNDYKLYSQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
+ +S+VLG G++Y + +++ Y+++ ++ + + D
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 209
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 210 TYSPDAHSVSAGISYRF 226
>gi|146340512|ref|YP_001205560.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp.
ORS278]
gi|146193318|emb|CAL77334.1| conserved hypothetical protein; putative outer-membrane immunogenic
protein precursor; putative exported protein
[Bradyrhizobium sp. ORS278]
Length = 259
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 63/218 (28%), Gaps = 22/218 (10%)
Query: 47 QDDEYGIWSGNYV-GLHISRLYETHPLADTIN-----RKTYNSLLPNGLGIELGHNIQL- 99
W+G Y+ G L+ T+ R + G++ Q
Sbjct: 33 MAPVAPSWTGFYIFGGGGGGLWNADSNVKTVGGLAITRDQRLGGNGWFGTVGAGYDWQFN 92
Query: 100 EDFVFGINCHTTAAKDDSTF------YRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFG 152
++ G+ + +EK ++ GY V ++L Y GG+
Sbjct: 93 GSWLAGVFADGQFGDIRGSLTDPNFALEGREKLRTSYAAGIRVGYLVAPNVLSYVNGGYS 152
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYR-- 204
G+ ++L + + H +G G++ +N + YR
Sbjct: 153 GSDWSGTNLSTLAAGGGATVATTPSFHRDGWFIGGGVENNLNIFGISAPGWFMKTEYRSA 212
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y A + + V K S + F
Sbjct: 213 YYSRVTLPETAVGAAAPFQTVTFKPWVQTISTSLVYRF 250
>gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15]
gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1]
Length = 350
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GMLSLGVSYRF 195
>gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1]
Length = 358
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GMLSLGVSYRF 203
>gi|299773231|gb|ADJ38690.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 370
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 12/224 (5%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLH-ISRLYETHPLADTINRKTY 81
+LAV + R N A + W+ + ++ ++ Y+ T
Sbjct: 7 ALAVSVSSVRSCISSNAAPQADSFYVGAKAGWATFHNDINQLNSKYKNDARYATSANGYG 66
Query: 82 NSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYS 139
+ G+ G+ I V G + + F K +G + LK Y
Sbjct: 67 INRNSVTYGVFGGYQIIDNLAVELGYDYFGRVRGNKQEFREFKHSA--HGTHLSLKPSYE 124
Query: 140 VDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
V S L +YG G + K+ + +S+++G G++Y + +++
Sbjct: 125 VLSGLDVYGKVGAALVRNDYKRY-FQTREPVKSHNLK-----TSLIVGAGVEYAILPELA 178
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+++ + + ++ + ++H + GI+ F
Sbjct: 179 FRVEYQWLSNVGNFTKAEMKENRRATYNYSPDSHSVTAGISYRF 222
>gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017]
Length = 356
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GLLSLGVSYRF 203
>gi|299773253|gb|ADJ38701.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|146342779|ref|YP_001207827.1| putative outer membrane protein (OMPA-like), hemin-binding protein
[Bradyrhizobium sp. ORS278]
gi|146195585|emb|CAL79612.1| conserved hypothetical protein; putative outer membrane protein
(OMPA-like), hemin-binding protein [Bradyrhizobium sp.
ORS278]
Length = 266
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 57/222 (25%), Gaps = 60/222 (27%)
Query: 54 WSGNYVGLHISRLYETHPLADTIN-----------------------RKTYNSLLPNGLG 90
W G Y G+ + + S +G G
Sbjct: 34 WDGYYAGVQGGYGSSDENFNGSTSTMTAAVLANTLIESQMQVSSWNMNLGKQSSRSSGFG 93
Query: 91 IELGHNIQLEDFVFGINCH-----------------TTAAKDDSTFYRLKEKYFIY---- 129
+G+N Q +D V G+ + A D ++ +
Sbjct: 94 GFVGYNSQWDDVVLGVEASYLHGKFGGMTSSTRALVSGTALTDGNYHSVTSTQSSQISIK 153
Query: 130 --GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS------ 181
+ +AGY++ L Y G V+ S G +
Sbjct: 154 DMATIRGRAGYALGCFLPYAFFGLALGNADIGQTVTVQDSVSATQLGAYTALQPLSANNI 213
Query: 182 -------SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
G+G+D + + A Y YI +V+ S
Sbjct: 214 QHNHLIYGYSAGLGVDVNLVGGLFARAEYEYIRFT-STVDTS 254
>gi|119387700|ref|YP_918734.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222]
gi|119378275|gb|ABL73038.1| hypothetical protein Pden_4978 [Paracoccus denitrificans PD1222]
Length = 416
Score = 45.6 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 51/165 (30%), Gaps = 37/165 (22%)
Query: 83 SLLPNGLGIELGH--NIQLEDFVFGINCHTTAAKDD-----STFYRLKEKYFIYGDVVLK 135
S N G+ G+ Q +FV GI H + ++ YG L+
Sbjct: 282 SEDGNSYGLFAGYRRQWQ-NNFVGGIEVHYGRNGSNRFNLAELGGTVQFGKDTYGA-ELQ 339
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
AGY++ L Y G+ D+ + + +GLDY V
Sbjct: 340 AGYAIKRALPYIAVGYANILDQDA-----------------------MTVSLGLDYAVTD 376
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ + A Y + S + R + GN I
Sbjct: 377 RLIVGAKYTHYDIGDIS-----GIDSIHRFEGDGNMVSLRAAIKF 416
>gi|27382516|ref|NP_774045.1| hypothetical protein bll7405 [Bradyrhizobium japonicum USDA 110]
gi|27355688|dbj|BAC52670.1| bll7405 [Bradyrhizobium japonicum USDA 110]
Length = 298
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 55/236 (23%), Gaps = 80/236 (33%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKT--------------------YNSLLPNGLGIEL 93
W G YVG++ + + ++ T + G +
Sbjct: 43 WDGAYVGVNGGYTADATDFSQSVVGLTNFIFRDSVLQQPTANWSLMNKTNTQSTNFGAFV 102
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG----------------------- 130
G N Q D + G+ + + ST I
Sbjct: 103 GRNWQWYDAILGLEGTYSYFNNLSTLTSGTNSLTIVNPPGDAHAANVTDNYDVTLTGTAA 162
Query: 131 -------DVVLKAGYSVDSLLIYG------------------------------MGGFGG 153
+ + G+ + Y +GG
Sbjct: 163 AKVKDMITLRGRVGWDGGDFMPYAFMGAAVGRMDVSRSVTSIVDLRQDVTNTIVVGGATL 222
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+ + V + + + R + G+G++Y + + Y Y+
Sbjct: 223 TTTTFGAPQAVPAQSQSQTQRRTNAFAVGWTAGLGVEYCIWDGLFARVEYEYVKFS 278
>gi|241761569|ref|ZP_04759656.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373877|gb|EER63410.1| hypothetical protein ZmobDRAFT_0733 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 270
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 131 DVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
D L+ G+ LLIY GG+ + S+ ++ G + +G G+
Sbjct: 177 DATLRMGFLPTKDLLIYMAGGYASGKQRNVSVNGA---GVAAPNSKYVGWSNGYSVGGGI 233
Query: 190 DYMVNYDISLSASYRYIPHHIHS 212
+Y + + ++A YR+ H+
Sbjct: 234 EYSITKNFFMNAQYRWTQFGNHT 256
>gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli]
gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli]
gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli]
gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli]
gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli]
gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GMLSLGVSYRF 203
>gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
Length = 350
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GLLSLGVSYRF 195
>gi|209968936|gb|ACJ02829.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968942|gb|ACJ02832.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968946|gb|ACJ02834.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968956|gb|ACJ02839.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968958|gb|ACJ02840.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714295|gb|ACN62142.1| outer membrane protein A [Haemophilus parasuis]
gi|312270743|gb|ADQ55772.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|22126613|ref|NP_670036.1| outer membrane protein A [Yersinia pestis KIM 10]
gi|45441153|ref|NP_992692.1| outer membrane protein A [Yersinia pestis biovar Microtus str.
91001]
gi|21959622|gb|AAM86287.1|AE013876_5 outer membrane porin A [Yersinia pestis KIM 10]
gi|45436013|gb|AAS61569.1| putative outer membrane porin A protein [Yersinia pestis biovar
Microtus str. 91001]
Length = 363
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 70/241 (29%), Gaps = 43/241 (17%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
++ ++ + +LAV L + DN W Y G +
Sbjct: 3 IWMIMRRKMKKTAIALAVALVGFATVAQAAPKDNT----------W---YTGGKLGWSQY 49
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-----DDSTFYRLK 123
IN G G G+ Q + G D K
Sbjct: 50 -QDTGSIINNDGPTHKDQLGAGAFFGY--QANQY-LGFEMGYDWLGRMPYKGDINNGAFK 105
Query: 124 EKYFIYGDVVLKAGYSVDSLL-IYG-MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ + K Y V L +Y +GG S + S + G
Sbjct: 106 AQGV---QLAAKLSYPVAQDLDVYTRLGGLVWRADAKGSFDGGLDRASGHDT------GV 156
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
S ++ +G +Y + + Y+++ N D E V + + + S+G++
Sbjct: 157 SPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPDNGLLSVGVSYR 206
Query: 242 F 242
F
Sbjct: 207 F 207
>gi|224714291|gb|ACN62140.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 45.6 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a]
gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a]
Length = 346
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L +Y +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDVYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627]
gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627]
Length = 358
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + I+ G G G+ Q+ +V G
Sbjct: 37 YTGAKLG--WSQFHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 193 GLLSLGVSYRF 203
>gi|218533179|ref|YP_002423995.1| hypothetical protein Mchl_5305 [Methylobacterium chloromethanicum
CM4]
gi|218525482|gb|ACK86067.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 287
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 55/194 (28%), Gaps = 27/194 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNS-----LLPNGLGIELGHNIQLEDFVFGINCHTT 111
++G + D + S G G+N+ F +
Sbjct: 92 YFIGGGVGYQINPWLRVDATGEYRFRSKWTFVAEDKTFGDTGGYNVTSGKF----DSIVG 147
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A G V A +S + G G + G Y I N
Sbjct: 148 LANGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGFGAYEGGYGI----------GRHN 197
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV---DRK 228
+ F + L GL Y V +I A+YRY+ + D + ++
Sbjct: 198 ERTNF-----AWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCPKTVYRVKE 252
Query: 229 GNAHIASLGINMHF 242
AH +G+ F
Sbjct: 253 LEAHDVKVGLRYLF 266
>gi|299773257|gb|ADJ38703.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|261213963|ref|ZP_05928244.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
gi|260915570|gb|EEX82431.1| outer membrane protein [Brucella abortus bv. 3 str. Tulya]
Length = 62
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ G G+DY ++ + YRY + + + VE K H LG+
Sbjct: 2 TGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVE-ARNKFKTHDIRLGVAY 60
Query: 241 HF 242
F
Sbjct: 61 KF 62
>gi|240141694|ref|YP_002966174.1| hypothetical protein MexAM1_META1p5295 [Methylobacterium extorquens
AM1]
gi|240011671|gb|ACS42897.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 287
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 55/194 (28%), Gaps = 27/194 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNS-----LLPNGLGIELGHNIQLEDFVFGINCHTT 111
++G + D + S G G+N+ F +
Sbjct: 92 YFIGGGVGYQINPWLRVDATGEYRFRSKWTFVAEDKTFGDTGGYNVTSGKF----DSIVG 147
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A G V A +S + G G + G Y I N
Sbjct: 148 LANGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGFGAYEGGYGI----------GRHN 197
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV---DRK 228
+ F + L GL Y V +I A+YRY+ + D + ++
Sbjct: 198 ERTNF-----AWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCPKTVYRVKE 252
Query: 229 GNAHIASLGINMHF 242
AH +G+ F
Sbjct: 253 LEAHDVKVGLRYLF 266
>gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354]
gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354]
Length = 350
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GMLSLGVSYRF 195
>gi|117625198|ref|YP_854245.1| tia invasion determinant [Escherichia coli APEC O1]
gi|218559962|ref|YP_002392875.1| Tia invasion determinant [Escherichia coli S88]
gi|218702439|ref|YP_002410068.1| Tia invasion determinant [Escherichia coli IAI39]
gi|218702831|ref|YP_002410460.1| Tia invasion determinant [Escherichia coli IAI39]
gi|300824790|ref|ZP_07104894.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7]
gi|70608343|gb|AAZ04415.1| Tia invasion determinant [Escherichia coli]
gi|115514322|gb|ABJ02397.1| Tia invasion determinant [Escherichia coli APEC O1]
gi|218366731|emb|CAR04490.1| Tia invasion determinant [Escherichia coli S88]
gi|218372425|emb|CAR20299.1| Tia invasion determinant [Escherichia coli IAI39]
gi|218372817|emb|CAR20696.1| Tia invasion determinant [Escherichia coli IAI39]
gi|300522697|gb|EFK43766.1| OmpA-like transmembrane domain protein [Escherichia coli MS 119-7]
gi|315286986|gb|EFU46401.1| OmpA-like transmembrane domain protein [Escherichia coli MS 110-3]
Length = 251
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
SD S +D + + +G G+ Y + DI+L SYRY+ S++ +A+ D +
Sbjct: 176 SDISALHYSGYD-NNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKS 234
Query: 226 DRKGNAHIASLGINMHF 242
+ +H G+ +F
Sbjct: 235 EADVKSHDIMFGVTYNF 251
>gi|46397593|gb|AAS91729.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 21/198 (10%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI------QLEDFVFG- 105
W+ + ++ + Y + G+ G+ I +L FG
Sbjct: 35 WATFHNDVNQFNSKYALDERYAGGPTAYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 94
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKV 164
+ + + DS + + LK Y V S L +YG G A V + V
Sbjct: 95 VRGNVQVDEQDSKAVKHTAHGT---HLSLKPSYEVVSGLDVYGKVG--AALVRNDYKNYV 149
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + S N +S++LG GL+Y + ++ Y+++ + + + ++ +
Sbjct: 150 DQEKSHN-------LKTSLLLGAGLEYAITPALAARLEYQWLSNVGNFNKAESKENRLRN 202
Query: 225 VDRKGNAHIASLGINMHF 242
V + + H S G+ F
Sbjct: 203 VTYRPDIHSVSAGLVYRF 220
>gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 350
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 28/190 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D+ K + + K GY + L + G + D+ ++K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDFYTRLGGMVWRADTKSNVPGGPSTKDH 140
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 141 DT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN----G 185
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 186 LLSVGVSYRF 195
>gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A]
gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271]
gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli]
gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A]
gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271]
Length = 350
Score = 45.2 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GLLSLGVSYRF 195
>gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 369
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 48 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 102
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 103 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 158
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 159 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 203
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 204 GLLSVGVSYRF 214
>gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972]
Length = 350
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GMLSLGVSYRF 195
>gi|126734487|ref|ZP_01750234.1| outer membrane protein, putative [Roseobacter sp. CCS2]
gi|126717353|gb|EBA14217.1| outer membrane protein, putative [Roseobacter sp. CCS2]
Length = 175
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 26/150 (17%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G Y G I ++ + GI G+N+Q V+G
Sbjct: 23 DWTGPYAGFQIGGS------DIDVDGAAELTGDGPSYGIFAGYNVQNGAIVYGGEIDYDV 76
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + + + + G + L YG G A + + DN
Sbjct: 77 TEYEIAGGAQEVDSTTR--LKGRIGTELGGGLAYGTAGVVWA-----TSPGLGDDN---- 125
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
++G+G D V ++++ A
Sbjct: 126 ---------GYLVGVGYDLPVTQNMTVGAE 146
>gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401]
gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401]
Length = 348
Score = 45.2 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GLLSLGVSYRF 195
>gi|223041685|ref|ZP_03611882.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
gi|223017549|gb|EEF15963.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
Length = 344
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 30/201 (14%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPN--------GLGIELGHNIQLEDFVFG 105
W+ + GL + N TY GL ELG++ V G
Sbjct: 18 WASFHDGLTQFDSKDGGAFGINRNSVTYGVFGGYQILNQNNFGLAAELGYDY-FGR-VRG 75
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG---GAYVIDSSLE 162
AAK + L K + +L +YG G Y +++
Sbjct: 76 NEGERRAAKHTAHGAHLSLKPSYE---------VIPNLDVYGKVGVALVRNDYWTQATVV 126
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSD 221
K + + + N K +LG G++Y + +++ Y+Y+ A
Sbjct: 127 KADREKAHNLKPSL-------LLGAGVEYAILPELAARVEYQYLNRVGNLDKAIEKANGA 179
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ H S G++ F
Sbjct: 180 WRNTQYSPDIHSVSAGLSYRF 200
>gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301]
gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227]
gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str.
2457T]
gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301]
gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227]
gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70]
gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71]
gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671]
gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71]
gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6]
gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218]
gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272]
gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304]
gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227]
Length = 348
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GLLSLGVSYRF 195
>gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 358
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 37 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 92 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 148 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 GLLSVGVSYRF 203
>gi|237706374|ref|ZP_04536855.1| tia invasion determinant [Escherichia sp. 3_2_53FAA]
gi|226899414|gb|EEH85673.1| tia invasion determinant [Escherichia sp. 3_2_53FAA]
gi|323951592|gb|EGB47467.1| tia protein [Escherichia coli H252]
gi|323957516|gb|EGB53235.1| tia protein [Escherichia coli H263]
Length = 248
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
SD S +D + + +G G+ Y + DI+L SYRY+ S++ +A+ D +
Sbjct: 173 SDISALHYSGYD-NNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKS 231
Query: 226 DRKGNAHIASLGINMHF 242
+ +H G+ +F
Sbjct: 232 EADVKSHDIMFGVTYNF 248
>gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197]
gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197]
Length = 350
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 65/188 (34%), Gaps = 24/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L IY G G + D+ + K+
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKDHDT 142
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 143 -----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GLL 187
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 188 SLGVSYRF 195
>gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88]
Length = 350
Score = 44.8 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ + K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKANVPGGASFKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GMLSLGVSYRF 195
>gi|91978374|ref|YP_571033.1| hypothetical protein RPD_3911 [Rhodopseudomonas palustris BisB5]
gi|91684830|gb|ABE41132.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 264
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 49/201 (24%), Gaps = 49/201 (24%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRK----------------------TYNSLLPNGLGI 91
W G YVG D+ S G G
Sbjct: 42 WQGFYVGGQAGTGASDMDFTDSTRGAAANLLVNTVIENTMSVSGWPVLGTTSSRGQGYGG 101
Query: 92 ELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKYFIY---------------GD 131
+G+N Q +D V GI + Y G
Sbjct: 102 FVGYNAQWDDVVLGIEANYMHGSFGGSTSGYMGRMFSSNNVPYDVDYTASASIKVNDVGS 161
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-------SVV 184
L+AG++ S L Y GG + + +
Sbjct: 162 ARLRAGWAFGSFLPYAFGGVALGQADIIRTAMISGTQNGVRFTPLVSNQIQNGHFIYGYS 221
Query: 185 LGIGLDYMVNYDISLSASYRY 205
G+G+D MV + + A + Y
Sbjct: 222 GGLGIDMMVYRGLFVRAEWEY 242
>gi|89052836|ref|YP_508287.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1]
gi|88862385|gb|ABD53262.1| hypothetical protein Jann_0345 [Jannaschia sp. CCS1]
Length = 206
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 49/183 (26%), Gaps = 22/183 (12%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
+ A + W+G Y G + + + + S G+ G+
Sbjct: 24 DPAPLDPVIISQPDHDWTGFYAGAQLDLVANAETTLEPFGQ--LMSFNGELAGLFAGYRY 81
Query: 98 QLEDFVFGINCHT-----TAAKDDSTFYRLKEKYFIYGDVVL-KAGYSVDSLLIYGMGGF 151
D V G + L + + + GY + L Y G+
Sbjct: 82 DFGDIVLGGEIDYMRGTYDVDEIAPNILLLSPEVDVELLRAGIEVGYDLGDFLPYATAGY 141
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ + D GIG DY V+ ++++ A + +
Sbjct: 142 AHLTLDYGGFGEDSGD--------------GWFAGIGADYRVSENVTVGAELLHHQFEFN 187
Query: 212 SVN 214
Sbjct: 188 DFG 190
>gi|115526159|ref|YP_783070.1| hypothetical protein RPE_4165 [Rhodopseudomonas palustris BisA53]
gi|115520106|gb|ABJ08090.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 263
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 54/203 (26%), Gaps = 48/203 (23%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRK----------------------TYNSLLPNGLGI 91
W G YVG H + S +G G
Sbjct: 42 WEGFYVGGHAGYGTSDMNFTNATEGVVAKLLDNTVVESLLGVSSWPVLDKRSAHGHGYGG 101
Query: 92 ELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKYFIYGD--------------- 131
+G+N Q + V GI + A S L YG
Sbjct: 102 FVGYNAQWDSVVLGIEANYLHGNFGGATTGSMARELISGGINYGATNTSSASINVRDVGS 161
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVI------DSSLEKVESDNSKNAKGRFDGHGSSVVL 185
L+AGY+ L Y GG + + A+ +
Sbjct: 162 ARLRAGYAWKGFLPYMFGGVSLGQADIIRAATIRGRDAGGTWVLSAAQAQHGHFIYGYAG 221
Query: 186 GIGLDYMVNYDISLSASYRYIPH 208
G+G+D M+ + L A + Y+
Sbjct: 222 GVGIDMMLVGGLFLRAEWEYLKF 244
>gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042]
Length = 350
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGVSTKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GMLSLGVSYRF 195
>gi|85715276|ref|ZP_01046259.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A]
gi|85697922|gb|EAQ35796.1| hypothetical protein NB311A_05248 [Nitrobacter sp. Nb-311A]
Length = 283
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 39/235 (16%), Positives = 64/235 (27%), Gaps = 59/235 (25%)
Query: 33 KIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLA------------------- 73
DL + +W G Y+G S
Sbjct: 30 PDDLPFLRGSQPAGLSTVRTVWQGFYIGGQASYGSADMDFKNSGKDLLERLLNNLDVEGQ 89
Query: 74 ---DTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT-----AAKDDSTFYRLKEK 125
T +S +G G LG+N+Q+ED VFG+ + T A S
Sbjct: 90 YHLSTWPLGGTSSNRSSGFGGFLGYNVQMEDAVFGVEANYTHGKFFGASSGSQGRSFNYP 149
Query: 126 YFI----------------YGDVVLKAGYSVDSLLIYGMGG---------------FGGA 154
+G + ++ GYS L Y G
Sbjct: 150 TNYLTSAFVQSNASMQITDFGSLRVRGGYSFGCFLPYAFAGVAMGRADIRRNASYSLYYQ 209
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGS-SVVLGIGLDYMVNYDISLSASYRYIPH 208
Y+ + S + + H G+G+D M+ + L A + ++
Sbjct: 210 YIGTQIPPLPDLSGSSSLSDNANAHFIYGYAAGLGIDMMIFDSLFLRAEWEFLRF 264
>gi|209968926|gb|ACJ02824.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714285|gb|ACN62137.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TIEPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895]
gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 34/192 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + I+ G G G+ Q+ +V G
Sbjct: 37 YTGAKLGWSQFHDVGNNQIDNNGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 93
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSK 170
++ K + + K GY + D L +Y +GG ++ + D
Sbjct: 94 YKGNTQNGAFKAQGV---QLTAKLGYPITDDLDVYTRLGGMVWRADAQNNTGFKDHDT-- 148
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G S V G++Y V DI+ Y++ + N +A + V + +
Sbjct: 149 ---------GVSPVFAGGVEYAVTRDIATRLEYQW------TNNIGDANT----VGGRPD 189
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 190 NGLLSVGVSYRF 201
>gi|291086630|ref|ZP_06356308.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291067496|gb|EFE05605.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 341
Score = 44.8 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 67/188 (35%), Gaps = 29/188 (15%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y G ++ + N N +G+ QL + F +
Sbjct: 32 GLYAGANMGWSQYYN------NNDFTRGHENNDIGVGGYIGYQLNPY-FSLENGILILG- 83
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAKG 174
D+ + + K Y V + IY +GG S + ++++SK
Sbjct: 84 DAEGDKNSSMTVQGYQLSGKISYPVSNTDIYTRLGGMWY----RSDYTRDDTNDSK---- 135
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G G + ++ +G++Y NY+I+ Y+++ + + S + +
Sbjct: 136 --VGTGIAPLISLGIEYAWNYNITSRVEYQWVGNIKNDAATS----------ANVDNGLL 183
Query: 235 SLGINMHF 242
S+G + HF
Sbjct: 184 SVGFSYHF 191
>gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane major heat-modifiable protein; AltName:
Full=Outer membrane protein 33K; Flags: Precursor
gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 350
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|325265458|ref|ZP_08132181.1| hypothetical protein HMPREF0240_04472 [Clostridium sp. D5]
gi|324029316|gb|EGB90608.1| hypothetical protein HMPREF0240_04472 [Clostridium sp. D5]
Length = 3306
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 57/180 (31%), Gaps = 16/180 (8%)
Query: 30 LPRKIDLFNEADNNVEYQ--DDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPN 87
+ F+ N+V + D +YG + Y+ +I +E +
Sbjct: 1614 GNSMSEKFDNKINSVMNKPGDTDYGARAAGYMAGNIVFNWENLQDPSKGVWDFVITDSGL 1673
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK--DDSTFYRLKEKYFIYGD-----------VVL 134
LG +LG++ + F AA D E YG +
Sbjct: 1674 TLGGKLGYHWTFNAYGFTTEFALGAAAEVDLKAIASYAEDVDAYGSDLLTTLRASGYIRA 1733
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK-GRFDGHGSSVVLGIGLDYMV 193
AG+ D ++ G G +D + + + + H + + G++++
Sbjct: 1734 FAGFGFDVAIVALKVGLFGQVNLDHYTQFLNREYRGAGNDDKLIRHATKLTGTAGVEFIF 1793
>gi|85860266|ref|YP_462468.1| outer membrane protein [Syntrophus aciditrophicus SB]
gi|85723357|gb|ABC78300.1| outer membrane protein [Syntrophus aciditrophicus SB]
Length = 199
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 28/158 (17%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAA---KDDSTFYRLKEKY-FIYGDVVLKAGYSVDSLL 144
LG + G+ + + G D ++K + + +L+ Y +
Sbjct: 66 LGAKKGYVVPAARW-LGAEVEYAFLEKHDIDEPEADFRDKTHNVMANFLLR--YPRGRIY 122
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+ G G ++ ++ ESDN + L G++Y + + S +YR
Sbjct: 123 PFAGVGIGFSWAEINANVLEESDN-----------ALAWQLITGINYEILPNWSADLAYR 171
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ N++ + E VD K H LG+N HF
Sbjct: 172 YL----------NSRYENENVDAKDENHAIVLGVNYHF 199
>gi|299773289|gb|ADJ38719.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRAAYNYSQ 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|213419602|ref|ZP_03352668.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 287
Score = 44.4 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 53 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+T K + + K GY + D L +Y G +S+
Sbjct: 108 YKGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 158
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 159 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 208
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 209 GLLSVGVSYRF 219
>gi|299773277|gb|ADJ38713.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 70/193 (36%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG A V + ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGK--VAAALVRNDYKRPPQTGGV 151
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 152 PTQPAH--NLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKGEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a]
Length = 327
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 8 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 62
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G G + D+ + K+
Sbjct: 63 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADTKANVPGGASFKD 118
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 119 HDT-----GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 163
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 164 GLLSLGVSYRF 174
>gi|299773291|gb|ADJ38720.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K + G+ G+ I V G +
Sbjct: 36 WATFHNDINQIDSKYANDARYDATNLKYGIARNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TIEPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|90425585|ref|YP_533955.1| hypothetical protein RPC_4110 [Rhodopseudomonas palustris BisB18]
gi|90107599|gb|ABD89636.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 274
Score = 44.4 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 57/225 (25%), Gaps = 63/225 (28%)
Query: 54 WSGNYVGLHISRLYETHPLADTI----------------------NRKTYNSLLPNGLGI 91
W G Y+G S D S G G
Sbjct: 39 WEGFYIGGQASYGTSDMNFTDATRGLAEQAMTNTLVNSAMQVSDWPTLGKQSAHGQGYGG 98
Query: 92 ELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK------------------------YF 127
+G+N Q D V G+ + K D + +
Sbjct: 99 FVGYNWQWTDVVLGLEANYIHGKFDGSDSNVANPMTRCMGLSDSLYHCAGYRSAASIVIN 158
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES---------DNSKNAKGRFDG 178
G +AG+SV S L Y GG + + +FD
Sbjct: 159 DLGSARARAGWSVGSFLPYMFGGVSLGQADIVRSASIRDTLYTASPALGGTYVGYNQFDR 218
Query: 179 HGS-------SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
G+G+D MV + + A + Y+ V+ S
Sbjct: 219 AKVQNGHFIYGYGGGLGVDMMVFGGLFVRAEWEYLKFA-APVDTS 262
>gi|307261911|ref|ZP_07543571.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306868382|gb|EFN00199.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 339
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 17/198 (8%)
Query: 54 WSGNYVGL-HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT- 111
W+ + G+ + Y + + G+ G+ I L FG+
Sbjct: 34 WATFHEGVRQFNDKYSNDARYNQDTTNLGINRNSVTYGVFGGYQI-LNQNNFGLATELGY 92
Query: 112 -----AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVES 166
+D F +K + + + +L +YG G +K E
Sbjct: 93 DYYGRVRGNDGEFRAMKHSAHGLNLALKPSYEVLPNLDVYGKVGVAVVRNDYKEYDK-EE 151
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
K K + +S +LG G++Y + +++ Y+Y+ + +N + +S + VD
Sbjct: 152 PTEKTHKLK-----ASTILGAGVEYAILPELAARIEYQYLNKAGN-LNKALVRSGTQDVD 205
Query: 227 RKG--NAHIASLGINMHF 242
+ + H + G++ F
Sbjct: 206 FQYAPDIHSVTAGLSYRF 223
>gi|254564202|ref|YP_003071297.1| hypothetical protein METDI5895 [Methylobacterium extorquens DM4]
gi|254271480|emb|CAX27495.1| conserved hypothetical protein; omp like [Methylobacterium
extorquens DM4]
Length = 287
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 27/194 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNS-----LLPNGLGIELGHNIQLEDFVFGINCHTT 111
++G + D + S G G+N+ F +
Sbjct: 92 YFIGGGVGYQINPWLRVDATGEYRFRSKWTFVAEDKTFGDTGGYNVTSGKF----DSIVG 147
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
G V A +S + G G + G Y I N
Sbjct: 148 LVNGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDKGFGAYEGGYGI----------GRHN 197
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV---DRK 228
+ F + L GL Y V +I A+YRY+ + D + ++
Sbjct: 198 ERTNF-----AWALHAGLGYAVTQNIRFEAAYRYLNMGEATTGVVTCAPDCPKTVYRVKE 252
Query: 229 GNAHIASLGINMHF 242
AH +G+ F
Sbjct: 253 LEAHDVKVGLRYLF 266
>gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74]
Length = 346
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNTYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GM 182
Query: 234 ASLGINMHF 242
SLG++ F
Sbjct: 183 LSLGVSYRF 191
>gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 356
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 32/191 (16%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + I+ G G G+ Q+ +V G
Sbjct: 37 YTGAKLGWSQFHDIGNNRIDNNGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLG--R 91
Query: 118 TFYRLKEKYFIYGD----VVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKN 171
Y+ E+ + + K GY + D L +Y +GG ++ + D
Sbjct: 92 MPYKGSEQNGAFKAQGVQLTAKLGYPITDDLDVYTRLGGMVWRADAKNNDGFKDHDT--- 148
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + V + +
Sbjct: 149 --------GVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANT----VGGRPDN 190
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 191 GLLSVGVSYRF 201
>gi|289809683|ref|ZP_06540312.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 264
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 5 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 59
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+T K + + K GY + D L +Y G +S+
Sbjct: 60 YKGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 110
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 111 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 160
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 161 GLLSVGVSYRF 171
>gi|56552387|ref|YP_163226.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753934|ref|YP_003226827.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543961|gb|AAV90115.1| hypothetical protein ZMO1491 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258553297|gb|ACV76243.1| hypothetical protein Za10_1709 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 267
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 131 DVVLKAGYS-VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
D L+ G+ LLIY GG+ + + + S ++ G + +G G+
Sbjct: 176 DATLRMGFLPTKDLLIYMAGGYASGKQRNLYMNGAGAPTS-----KYVGWSNGYSVGGGI 230
Query: 190 DYMVNYDISLSASYRYIPHHIHS 212
+Y + + ++A YR+ H+
Sbjct: 231 EYSITKNFFMNAQYRWTQFGNHT 253
>gi|238919302|ref|YP_002932817.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
gi|238868871|gb|ACR68582.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
Length = 353
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 22/187 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + ++++ PN LG Q + G S
Sbjct: 29 YVGGKLGWSHF---ISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRMS 84
Query: 118 TFYRLKEKYFIYG-DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ K+ G + K Y +D+L +Y G + +
Sbjct: 85 YTGDVNAKFKSQGVQLAAKLSYPLMDNLDVYTRLG------GMVWRSDIHGAANGGEYTS 138
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G S + IG++Y +N D + Y+Y+ + V S+ + + + S
Sbjct: 139 SHDTGVSPLAAIGVEYALNKDWATRLDYQYV----NKVGTSS------ETGARPDNTMLS 188
Query: 236 LGINMHF 242
LG+ F
Sbjct: 189 LGVVYRF 195
>gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168]
gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168]
Length = 351
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 23/188 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIDNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L IY G G + D+ +N A
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLG-GMVWRADTK----SHNNLTGAST 138
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ G S V G+++ + DI+ Y++ + N +A + R D +
Sbjct: 139 KDHDTGVSPVFAGGIEWAMTRDIATRLEYQW------TNNIGDANTIGTRPDN----GLL 188
Query: 235 SLGINMHF 242
S+G++ F
Sbjct: 189 SVGVSYRF 196
>gi|188584565|ref|YP_001928010.1| hypothetical protein Mpop_5383 [Methylobacterium populi BJ001]
gi|179348063|gb|ACB83475.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 288
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 27/194 (13%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNS-----LLPNGLGIELGHNIQLEDFVFGINCHTT 111
++G + D + S G G+N+ F +
Sbjct: 93 YFIGGGVGYQINPWLRVDATGEYRFRSKWSFVAEDKTFGDTGGYNVTSGKF----DSIVG 148
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A G V A +S + G G + G Y I +N
Sbjct: 149 LANGYVDLGTWYGVTPFVGAGVGVAHHSFGGVTDSGFGAYEGGYGI----------GRRN 198
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV---DRK 228
+ F + L GL Y V ++ A+YRY+ + D + +
Sbjct: 199 ERTNF-----AWALHAGLGYAVTENVRFEAAYRYLNMGEATTGVVTCAPDCPKTVYRVKD 253
Query: 229 GNAHIASLGINMHF 242
AH +G+ F
Sbjct: 254 LEAHDVKVGLRYLF 267
>gi|90578366|ref|ZP_01234177.1| outer membrane protein, putative [Vibrio angustum S14]
gi|90441452|gb|EAS66632.1| outer membrane protein, putative [Vibrio angustum S14]
Length = 189
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 60/189 (31%), Gaps = 24/189 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVG + + N + G+ G+N G+
Sbjct: 24 TGPYVGASLGNATTDLKADHWEHNYDENVV---AYGLYGGYNFNEN---LGLEATLGQTG 77
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + Y + + + D L ++ G +D + + + N +
Sbjct: 78 EQDNIKK------GYATLTPRVMMPLNDQLSLFAKAGVAYV-AVDGDYDGIGNMN----R 126
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D G G G+++ V I L A Y+ + +N + ++ +
Sbjct: 127 HDIDVDGFGWTAGAGVNFAVAEHIDLRAGIDYLSTDLEKADND------KDLNIDSETTM 180
Query: 234 ASLGINMHF 242
+G+N +F
Sbjct: 181 YYVGVNYNF 189
>gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
Length = 353
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 58/186 (31%), Gaps = 22/186 (11%)
Query: 58 YVGLHISRLYETHP-LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + L T + G G G+ Q+ + G
Sbjct: 29 YAGAKLGWSQYHDTGLTGNGYNVTNAAQNQLGAGAFGGY--QVNPY-LGFEMGYDWLG-- 83
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
R+K G + G + + L Y + Y + +
Sbjct: 84 ----RMKYNGGNQGSFKAQ-GVQLSAKLSYPIVDDLDIYTRLGGFVSRTDSHDNSGLNDH 138
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D G S + +G++Y + + + Y+++ N +A + V + + + S+
Sbjct: 139 D-TGVSPLAAVGVEYAITKNWATRLDYQWVN------NIGDAST----VGGRPDNGLLSV 187
Query: 237 GINMHF 242
G++ F
Sbjct: 188 GVSYRF 193
>gi|46251212|gb|AAS84577.1| truncated Omp25b [Brucella canis]
Length = 120
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLE-DFVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + +FV G+
Sbjct: 38 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 94
Query: 107 NCHTTAAKDDST 118
+ T D++
Sbjct: 95 DGDITYNDLDAS 106
>gi|301049231|ref|ZP_07196205.1| OmpA-like transmembrane domain protein [Escherichia coli MS 185-1]
gi|300298964|gb|EFJ55349.1| OmpA-like transmembrane domain protein [Escherichia coli MS 185-1]
Length = 251
Score = 43.6 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 155 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 214
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 215 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|153947861|ref|YP_001401507.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
gi|152959356|gb|ABS46817.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
Length = 357
Score = 43.6 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 56/192 (29%), Gaps = 30/192 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + IN G G G+ Q + G
Sbjct: 33 YTGGKLGWSQY-QDTGSIINNDGPTHKDQLGAGAFFGY--QANQY-LGFEMGYDWLGRMP 88
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYG-MGGFGGAYVIDSSLEKVESDNSK 170
D K + + K Y V L +Y +GG S + S
Sbjct: 89 YKGDINNGAFKAQGV---QLAAKLSYPVAQDLDVYTRLGGLVWRADAKGSFDGGLDRASG 145
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S ++ +G +Y + + Y+++ N D E V + +
Sbjct: 146 HDT------GVSPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPD 189
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 190 NGLLSVGVSYRF 201
>gi|312270717|gb|ADQ55759.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|312270741|gb|ADQ55771.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W + ++ I Y + D N K + G+ G+ I V G +
Sbjct: 36 WVSFHNDINQIDSKYASDARYDATNLKYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TTEPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|170750729|ref|YP_001756989.1| porin [Methylobacterium radiotolerans JCM 2831]
gi|170657251|gb|ACB26306.1| porin [Methylobacterium radiotolerans JCM 2831]
Length = 314
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 52/211 (24%), Gaps = 74/211 (35%)
Query: 81 YNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS---------------------TF 119
G G N+Q + V GI T +S
Sbjct: 94 GTRTRGASFGAFAGFNVQFDGIVLGIEADYTHTDQNSWSTNGINRIMTTAAGNSESVNLS 153
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV----------------------- 156
+ YG + +AGY+ +LL Y G V
Sbjct: 154 GTSNTRIEDYGTIRGRAGYAFGNLLPYVTAGAAIGRVTINDTVSVQNYGYSATTYAANQA 213
Query: 157 -----------------------IDSSLEKVESDNSKNAKGRFDGHGSSVVLGI-----G 188
+S+ + A + + +G G
Sbjct: 214 LTTGQPAAVYQHGYASFNPNFPLNNSTPAGQGAQTVPYAPTPLTANARTKTIGGVALGFG 273
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
L+Y + +I + Y+Y+ N NA+
Sbjct: 274 LEYAITPNILVRGEYQYVRF--QDFNGHNAQ 302
>gi|260769108|ref|ZP_05878041.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260614446|gb|EEX39632.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 189
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 22/194 (11%)
Query: 58 YVGLHISRLYETHPL-------ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
YVG + + T T I G+ Q + F +
Sbjct: 8 YVGGALGQARFDDASVSGTVMGYSTTQDLTLEDDKSTIASIFGGY--QFNRY-FALEGSV 64
Query: 111 TAAKDDSTFYRLKEKYFI-YGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDN 168
T D+ + + Y + K V D + ++ G V
Sbjct: 65 TG--IDALDGSVVTVGDMSYIAIQPKVSLPVTDHVSLFAKAGVAYFNAEIKVSNAVAG-- 120
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ F + +LG+G++ + + AS+ Y+ + VN A + VE
Sbjct: 121 -YSGYSTFSDSDVTGILGLGVEVAATDNWHIRASWDYLRPELDVVNVGYANASVE----- 174
Query: 229 GNAHIASLGINMHF 242
+ ++ SLG++ HF
Sbjct: 175 TDINVFSLGVSYHF 188
>gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032]
gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032]
Length = 355
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 34/191 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + I G G G+ Q+ +V G
Sbjct: 37 YAGGKLG--WSQFHDTGFIPNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 91
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY V D L +Y G G + DSS D+
Sbjct: 92 YKGDTVNGAFKAQGV---QLTAKLGYPVTDDLDVYTRLG-GMVWRADSSSNIGGDDHDT- 146
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G+++ + DI+ Y+++ N +A++ V + +
Sbjct: 147 --------GVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDAQT----VGARPDN 188
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 189 GMLSVGVSYRF 199
>gi|268592764|ref|ZP_06126985.1| adhesin/virulence factor Hek [Providencia rettgeri DSM 1131]
gi|291311541|gb|EFE51994.1| adhesin/virulence factor Hek [Providencia rettgeri DSM 1131]
Length = 244
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 75/234 (32%), Gaps = 34/234 (14%)
Query: 41 DNNVEYQDDEYGIWSGNYVGLHIS--------RLYETHPLADTINRKTYNS----LLPNG 88
++ + I +G YV + + + AD + T N G
Sbjct: 13 CVSLPAFANAGDIKTGLYVTGKMGASIVQLSGQQFIYSGYADAGDNGTKNGDSHRTSVFG 72
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRL----KEKYFIYGDVVLKAGYSVDSLL 144
G+ LG++ F + D + + ++ +K +++L+
Sbjct: 73 GGLALGYDF-SSQFDVPVRAELEFTARDKANSAYNIRDRVRNGVHQTRDIKNQVKLNTLM 131
Query: 145 I--------------YGMGGFGGAYV--IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ Y G G A V + + S++ + + +G G
Sbjct: 132 VNGYYDIKNSSNFTPYVSVGLGYAAVDFKTTRADAYTPGLSQHDTHTHTANNFAWSVGAG 191
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++Y +N D + SYRY+ + + + K A+ LG+ F
Sbjct: 192 VNYAINDDWDMGLSYRYLDAGKADITTTVGDGENTS-KVKVKANDILLGLTYRF 244
>gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894]
gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894]
Length = 358
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 34/191 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + I G G G+ Q+ +V G
Sbjct: 40 YAGGKLG--WSQFHDTGFIPNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 94
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY V D L +Y G G + DSS D+
Sbjct: 95 YKGDTVNGAFKAQGV---QLTAKLGYPVTDDLDVYTRLG-GMVWRADSSSNIGGDDHDT- 149
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G+++ + DI+ Y+++ N +A++ V + +
Sbjct: 150 --------GVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDAQT----VGARPDN 191
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 192 GMLSVGVSYRF 202
>gi|89056585|ref|YP_512036.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1]
gi|88866134|gb|ABD57011.1| hypothetical protein Jann_4094 [Jannaschia sp. CCS1]
Length = 245
Score = 43.6 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 31/220 (14%)
Query: 54 WSGNYVGLHISRLYETHPLADTINR-KTYNSLLPNGLG---IELGHNIQLEDFVFGINCH 109
++G YVG+ ++ R + L P+ G + G+ L +V G
Sbjct: 24 FTGFYVGVGADTGLHQETSSNLSARVNGADVLDPHATGATNLFAGYTTDLGIWVVGGEAE 83
Query: 110 TTAAKDDST----FYRLKEKYFIYGD------VVLKAGYSV-DSLLIYGMGGFGGAYVID 158
+ D + L +I G V AG ++ + L++ G +
Sbjct: 84 LSLFSIDFSEADCRPPLCADAYIIGTRDNAIRVRAIAGQALTEDTLLFATAGLTASQYTY 143
Query: 159 SSLEKVES-----DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS----LSASYRYIPHH 209
+ V + + N G +G+G ++ V S +S Y+
Sbjct: 144 RGVRAVTNLGMGLGGASNTGPEETGMAYGFNIGVGAEHRVTERFSFRGDVSFERVYVTGV 203
Query: 210 IHSVNNSNAKSDVERV-------DRKGNAHIASLGINMHF 242
+ S+ V D G++ F
Sbjct: 204 TPQLAGSSGSVAGNTVAARAFLTDGSYQMESVRFGVSAVF 243
>gi|257465745|ref|ZP_05630116.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
gi|257451405|gb|EEV25448.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
Length = 212
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 73/205 (35%), Gaps = 28/205 (13%)
Query: 54 WSGNYVGL-HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+ + G+ + + + IN+ + G G+ I L FG+
Sbjct: 18 WASFHDGIKQLDATHYNNEAGYGINKNSVT------YGAFAGYQI-LNQNKFGLATEVGY 70
Query: 113 ---------AKDDSTFYRLKEKYFIYGDVVL-KAGYSVDSLL-IYGMGGFGGAYVIDSSL 161
+ + K+ +G + K Y V L +YG G +
Sbjct: 71 EQFGRVRGHQNTQAGSEKQTFKHSAHGTTIALKPSYEVLPDLDVYGKVGIA-----LVNN 125
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH----HIHSVNNSN 217
D + SS++LG+G++Y + +++ Y+++ + +++
Sbjct: 126 RYKTVDVQTKEPTKTSRFQSSLILGVGVEYAITPELAARVEYQWLNNAGKASQATLDRMA 185
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+SD + D + + S G++ F
Sbjct: 186 RQSDAQVTDYRPDISSVSAGLSYRF 210
>gi|213950522|gb|ACJ54534.1| outer membrane protein A [Haemophilus parasuis]
Length = 305
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ I Y D N K S G+ G+ I V G +
Sbjct: 11 WATFHNDINQIDSKYANDARYDATNLKYGISRNSVTYGVFGGYQIIDNLAVELGYDYFGR 70
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 71 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 124
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 125 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 184
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 185 DSHSVTAGISYRF 197
>gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
Length = 356
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 19/155 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + ++ PN LG Q + G
Sbjct: 35 YVGGKLGWSHY---IGNSFENMDSTKSHPNQLGAGAFFGYQANPY-LGFEM--------- 81
Query: 118 TFYRLKEKYFIYGDVVLKA---GYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
Y + GDV K G + + L Y + Y + ++ +A
Sbjct: 82 -GYDWLGRMGYTGDVNGKFKAQGIQLAAKLSYPLMDNLDVYTRLGGMVWRADAHASDATD 140
Query: 175 RFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIP 207
GH + V + IG++Y +N D + Y+Y+
Sbjct: 141 YVSGHDTGVSPLAAIGVEYALNKDWATRLDYQYVN 175
>gi|224714311|gb|ACN62150.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|183601209|ref|ZP_02962702.1| hypothetical protein PROSTU_04842 [Providencia stuartii ATCC 25827]
gi|188019557|gb|EDU57597.1| hypothetical protein PROSTU_04842 [Providencia stuartii ATCC 25827]
Length = 244
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 34/220 (15%)
Query: 55 SGNYVGLHISRLYETHP--------LADTINRKTYNSLLP----NGLGIELGHNIQLEDF 102
+G YV + E AD + T N G G+ LG++ F
Sbjct: 27 TGLYVTGKMGASIEQMSGQQFVYSGYADAGDNGTKNGDNHRTGVFGGGLALGYDF-SNQF 85
Query: 103 VFGINCHTTAAKDDSTFYRL----KEKYFIYGDVVLKAGYSVDSLLI------------- 145
+ D + + ++ +K +++L++
Sbjct: 86 DIPVRAELEFMARDKANSTYNIRDRVRNGVHQTRDIKNQIKLNTLMVNGYYDIKNSSDFT 145
Query: 146 -YGMGGFGGAYV--IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
Y G G A V + + S + + + +G G++Y +N D + S
Sbjct: 146 PYISVGLGYAAVDFKTTRADAYTPGLSLHDTHTHTANNFAWSVGAGVNYAINDDWDMGLS 205
Query: 203 YRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YRY+ + + + K A+ LG+ F
Sbjct: 206 YRYLDAGKADITTAVGDGENTS-KIKVKANDIMLGLTYRF 244
>gi|254361457|ref|ZP_04977597.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
gi|153092967|gb|EDN73993.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
Length = 230
Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP---HHIHSVNNSNAK 219
V+ K+++ + S++LG GL+Y + +++ Y+Y+ + +V +
Sbjct: 2 YVQQHVDKDSRIKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGY 61
Query: 220 SDVERVDRKG--NAHIASLGINMHF 242
+ + + H S G++ F
Sbjct: 62 LIPRGTNFQYSPDIHSVSAGLSYRF 86
>gi|312270721|gb|ADQ55761.1| OmpA [Haemophilus parasuis]
gi|312270723|gb|ADQ55762.1| OmpA [Haemophilus parasuis]
Length = 366
Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|299773255|gb|ADJ38702.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|299773235|gb|ADJ38692.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|238752400|ref|ZP_04613878.1| Opacity protein and surface antigens-like protein [Yersinia rohdei
ATCC 43380]
gi|238709441|gb|EEQ01681.1| Opacity protein and surface antigens-like protein [Yersinia rohdei
ATCC 43380]
Length = 227
Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
IYG G G A V S + N+ + +G G+ Y V ++S+ YR
Sbjct: 130 IYGTLGLGLAKVESSGWQG----NTSRQYTENTQTNLAYSVGAGVSYAVMNNLSIDLGYR 185
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
Y+ +N + D + AH+ S
Sbjct: 186 YVDMGNVESGYNNFTNARRLQDEQMKAHLIS 216
>gi|167856409|ref|ZP_02479133.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|167852469|gb|EDS23759.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|209968896|gb|ACJ02809.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968900|gb|ACJ02811.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968904|gb|ACJ02813.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968916|gb|ACJ02819.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968932|gb|ACJ02827.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968960|gb|ACJ02841.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968964|gb|ACJ02843.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831781|gb|ACJ23250.2| OmpA [Haemophilus parasuis]
gi|224714297|gb|ACN62143.1| outer membrane protein A [Haemophilus parasuis]
gi|224714299|gb|ACN62144.1| outer membrane protein A [Haemophilus parasuis]
gi|224714301|gb|ACN62145.1| outer membrane protein A [Haemophilus parasuis]
gi|224714309|gb|ACN62149.1| outer membrane protein A [Haemophilus parasuis]
gi|224714313|gb|ACN62151.1| outer membrane protein A [Haemophilus parasuis]
gi|224714315|gb|ACN62152.1| outer membrane protein A [Haemophilus parasuis]
gi|224714323|gb|ACN62156.1| outer membrane protein A [Haemophilus parasuis]
gi|224714325|gb|ACN62157.1| outer membrane protein A [Haemophilus parasuis]
gi|224714327|gb|ACN62158.1| outer membrane protein A [Haemophilus parasuis]
gi|224714329|gb|ACN62159.1| outer membrane protein A [Haemophilus parasuis]
gi|224714331|gb|ACN62160.1| outer membrane protein A [Haemophilus parasuis]
gi|224714333|gb|ACN62161.1| outer membrane protein A [Haemophilus parasuis]
gi|299773239|gb|ADJ38694.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773269|gb|ADJ38709.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270735|gb|ADQ55768.1| OmpA [Haemophilus parasuis]
gi|312270737|gb|ADQ55769.1| OmpA [Haemophilus parasuis]
gi|312270739|gb|ADQ55770.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 43.6 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|316935831|ref|YP_004110813.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris DX-1]
gi|315603545|gb|ADU46080.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris DX-1]
Length = 263
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 50/204 (24%), Gaps = 49/204 (24%)
Query: 54 WSGNYVGLHISRLYETHPLADTI----------------------NRKTYNSLLPNGLGI 91
W G YVG ++ S G G
Sbjct: 41 WEGFYVGGQAGYGTSDMNFTNSTSDIASNLLANTVIESQMGVSSWPVLGKTSSHGQGWGA 100
Query: 92 ELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKYFIY---------------GD 131
G+N Q +D V G+ + S ++ Y G
Sbjct: 101 FAGYNAQWDDVVLGVEANYMHGSFGGSAIGSMGRQITYNNVNYSATYTSSAAINVNDIGS 160
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-------SVV 184
L+AGY+ S L Y G + +
Sbjct: 161 ARLRAGYAFGSFLPYAFIGASLGQADIVRTATITGTQGGSTVMPLSATRVQNGHFIYGYA 220
Query: 185 LGIGLDYMVNYDISLSASYRYIPH 208
G+G+D M+ + L A + Y+
Sbjct: 221 GGLGMDMMLYRGLFLRAEWEYLKF 244
>gi|254501451|ref|ZP_05113602.1| Porin subfamily [Labrenzia alexandrii DFL-11]
gi|222437522|gb|EEE44201.1| Porin subfamily [Labrenzia alexandrii DFL-11]
Length = 264
Score = 43.3 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 59/212 (27%), Gaps = 27/212 (12%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTY-----NSLLPNGLGIELGHNIQLEDF-------- 102
G Y+ I P + L N I G Q +
Sbjct: 36 GFYLRGDIGYKVYGDPSGSFNDSAIGGLRYERESLDNTWMIGAGVGYQFNRYFRSDVTVD 95
Query: 103 -----VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGG 153
F K ++ ++ GY + + + Y G G
Sbjct: 96 YEAKATATGYAPCGGCAAAGQFSTEKADIDVWTVMLN--GYVDLATWNRITPYVGAGIGA 153
Query: 154 AYVIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+YV S+ + D + ++ +G + L G +Y V + S+ A YRY
Sbjct: 154 SYVSASNKTSLNPDGTFSSYDGSNGDWNFAWALMAGAEYAVTPNWSIDAGYRYKDLGEAK 213
Query: 213 VNN--SNAKSDVERVDRKGNAHIASLGINMHF 242
+ + V AH +G F
Sbjct: 214 TVKLYNVGTGESREVWEDLTAHEFRIGARYTF 245
>gi|213580658|ref|ZP_03362484.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 296
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 53 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 107
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+T K + + K GY + D L +Y G +S+
Sbjct: 108 YKGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 158
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 159 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 208
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 209 GLLSVGVSYRF 219
>gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 66/192 (34%), Gaps = 36/192 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + I G G G+ Q+ +V G
Sbjct: 29 YAGGKLG--WSQFHDTGFIPNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSK 170
D+ K + + K GY V D L +Y +GG +D+S
Sbjct: 84 YKGDTVNGAFKAQGV---QLTAKLGYPVTDDLDVYTRLGGMVW-----------RADSSS 129
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
N G G S V G+++ + DI+ Y+++ N +A++ V + +
Sbjct: 130 NIAGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDAQT----VGARPD 179
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 180 NGMLSVGVSYRF 191
>gi|192293155|ref|YP_001993760.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
gi|192286904|gb|ACF03285.1| outer membrane insertion C-terminal signal [Rhodopseudomonas
palustris TIE-1]
Length = 263
Score = 43.3 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 35/212 (16%), Positives = 60/212 (28%), Gaps = 55/212 (25%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINR----------------------KTYNSLLP 86
W G YVG +++ + S
Sbjct: 36 PRVINWEGFYVGGQGGYGTSDMDFSNSTSGIASNLLVNTVIENQMSVSSWPVLGKASSHG 95
Query: 87 NGLGIELGHNIQLEDFVFGINCH------------TTAAKDDSTFYRLKEKYFI------ 128
G G G+N Q +D V G+ + + + D + Y
Sbjct: 96 QGWGAFAGYNAQWDDVVLGVEANYMHGSFGGGATGSMGRQIDYNNVNYRAIYTSSAAINV 155
Query: 129 --YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS----- 181
G L+AGY+ S L Y F GA + + + + + F +
Sbjct: 156 NDIGSARLRAGYAFGSFLPYA---FIGASLGQADIVRTATITGTQGGVPFTPLSATQVQN 212
Query: 182 -----SVVLGIGLDYMVNYDISLSASYRYIPH 208
G+G+D M+ + L A + Y+
Sbjct: 213 GHFIYGYAGGLGMDVMLYRGLFLRAEWEYLKF 244
>gi|299773263|gb|ADJ38706.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|91213830|ref|YP_543816.1| adhesin/virulence factor Hek [Escherichia coli UTI89]
gi|14993800|gb|AAK73174.1| adhesin/virulence factor Hek [Escherichia coli]
gi|91075404|gb|ABE10285.1| adhesin/virulence factor Hek [Escherichia coli UTI89]
gi|307629349|gb|ADN73653.1| OmpA family protein [Escherichia coli UM146]
Length = 251
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 155 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 214
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 215 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|312270715|gb|ADQ55758.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 43.3 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 72/193 (37%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANRYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
++ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNNQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|299773229|gb|ADJ38689.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|312270727|gb|ADQ55764.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 43.3 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|300903858|ref|ZP_07121762.1| OmpA-like transmembrane domain protein [Escherichia coli MS 84-1]
gi|300404154|gb|EFJ87692.1| OmpA-like transmembrane domain protein [Escherichia coli MS 84-1]
gi|315256867|gb|EFU36835.1| OmpA-like transmembrane domain protein [Escherichia coli MS 85-1]
Length = 251
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 155 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 214
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 215 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|296282167|ref|ZP_06860165.1| hypothetical protein CbatJ_01035 [Citromicrobium bathyomarinum
JL354]
Length = 203
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 57/174 (32%), Gaps = 17/174 (9%)
Query: 46 YQDDEY-GIWSGNYVGLHISRLYETHPLADT-INRKTYNSLLPNGLGIELGHNIQLEDFV 103
QD + G ++G VG+ Y A T Y G G G++I + D V
Sbjct: 29 AQDVPFDGAYAGPLVGVLEHHFYIEQTDAQTGATDGAYTRDWDIGGGAMAGYDIAVGDRV 88
Query: 104 -FGINCHT-TAAKDDSTF---YRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVI 157
G TF R ++ + G + D L + GGFGG
Sbjct: 89 RIGAEVSLLKGGGSPETFVGGARYQQNERFGYRATGRIGVVAADRALFFVKGGFGGDRYA 148
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
+ VE +S V+G G ++ I L Y ++ H
Sbjct: 149 IDNAAGVE---------DAREWRTSFVVGAGAQVRLDERIDLRFEYEHLDSSAH 193
>gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 355
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 67/218 (30%), Gaps = 38/218 (17%)
Query: 30 LPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHIS---RLYETHPLADTINRKTYNSLLP 86
LP + + + G + YVG + Y + +R
Sbjct: 25 LPTSTQSNINTEFSNSTLLPDNGDY--WYVGTKLGLSVYQYGCEEWSIDCDR------TD 76
Query: 87 NGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIY 146
G G +G+ I + +GI T Y ++ + L Y+ +
Sbjct: 77 LGGGFFVGYQI---NESWGIELGKTFLGAAKAEYFSRKVTGDMETIDLFGKYTYGLTDRF 133
Query: 147 GMGGFGG--AYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
G G G + + + VE+ G + +G G Y +N Y+
Sbjct: 134 GFFGKAGLANWNGKTKSDYVETTT----------FGHDLSVGFGAQYALNKRWLTQLEYQ 183
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
YI NS V + + H+ S+GI F
Sbjct: 184 YI--------NSIGDDTV----GESDYHLMSIGIIYRF 209
>gi|227886672|ref|ZP_04004477.1| heat resistant agglutinin 1 [Escherichia coli 83972]
gi|23954223|emb|CAD42020.1| adhesin/virulence factor Hek [Escherichia coli]
gi|227836245|gb|EEJ46711.1| heat resistant agglutinin 1 [Escherichia coli 83972]
gi|315293642|gb|EFU52994.1| OmpA-like transmembrane domain protein [Escherichia coli MS 153-1]
gi|324014420|gb|EGB83639.1| OmpA-like transmembrane domain protein [Escherichia coli MS 60-1]
Length = 251
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 155 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 214
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 215 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976]
gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976]
Length = 383
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 36/181 (19%)
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGY---------------- 138
+ I +G+ ++ + Y YG V G
Sbjct: 61 YGINRNSVTYGVFGGYQILNQNNFGLAAELGYDYYGRVRGNKGEFRSFKHSAHGLNFALK 120
Query: 139 ----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ +L +YG G V+ + + ++N+ +F +S +LG G++Y++
Sbjct: 121 PSYEVLPNLDVYGKVGVA---VVRNDYKFYSAENTNEPTEKFHKLKASTILGAGVEYVIL 177
Query: 195 YDISLSASYRY------IPHHIHSVNNSNAKSDVERVDRKG-------NAHIASLGINMH 241
+++ Y+Y + + N + R + + H ++G++
Sbjct: 178 PELAARVEYQYLNKAGNLNKAGNFNKAGNFNKALVRSGGQDVSYQYAPDIHSVTVGLSYR 237
Query: 242 F 242
F
Sbjct: 238 F 238
>gi|260777303|ref|ZP_05886197.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606969|gb|EEX33243.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 196
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 61/197 (30%), Gaps = 29/197 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSL--------LPNGLGIELGHNIQLEDFVFGI 106
+ Y+G+ + + + N + +G+ Q D+ F I
Sbjct: 20 ANPYLGVAVGQAKFKDTYSSYNTTLFGNGSYKLDLEDDDSTAAKLFVGY--QFNDY-FAI 76
Query: 107 NCHTTAAK-DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
D ++ + + F+ D ++ GG
Sbjct: 77 EGSLGGYDAIDGSYVSIGDMTFLATQAKGILPIG-DRFNLFVKGGIAYFGAEF------- 128
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
K + + + G G ++ ++ +I LSA + YI + V N VE
Sbjct: 129 ----KTSYATVSDEAITGMYGAGAEFAISKNIKLSAEFDYIRPELEVVKIGNETLSVE-- 182
Query: 226 DRKGNAHIASLGINMHF 242
+ SLG++ HF
Sbjct: 183 ---SDITTLSLGLSYHF 196
>gi|300922124|ref|ZP_07138263.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
gi|300421526|gb|EFK04837.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
Length = 249
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+ Y V DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 190 WSLGAGVRYDVTPDIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 249
>gi|300974880|ref|ZP_07172763.1| OmpA-like transmembrane domain protein [Escherichia coli MS 200-1]
gi|300308841|gb|EFJ63361.1| OmpA-like transmembrane domain protein [Escherichia coli MS 200-1]
Length = 251
Score = 43.3 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 155 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 214
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 215 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 251
>gi|299134299|ref|ZP_07027492.1| porin [Afipia sp. 1NLS2]
gi|298591046|gb|EFI51248.1| porin [Afipia sp. 1NLS2]
Length = 275
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 53/217 (24%), Gaps = 60/217 (27%)
Query: 54 WSGNYVGLHISRLYETHPLADTINR-----------------------KTYNSLLPNGLG 90
W G Y G + + + + + +G
Sbjct: 41 WQGFYAGGQAGYGSADMNFSSSNSAMIAQLLANTNIENEMNVSSWPLLGGKTNTHQSQVG 100
Query: 91 IELGHNIQLEDFVFGIN-------CHTTAAKDDSTFYRLKEKYFIY-------------- 129
+G+N Q +D V G+ + + L +Y
Sbjct: 101 GFVGYNSQWDDVVLGVEANYMHGTFSGASVSAPVSRGMLLTSDSLYHIVTVNSSKSISIS 160
Query: 130 --GDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD--------------NSKNAK 173
G + +AGY + + Y GG S V +
Sbjct: 161 DMGTIRARAGYVWGNFMPYVFGGAALGRGNIYSAVSVSDQKGADSAAAQAATPVTLSASD 220
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
G G+G + M+ ++ A + YI
Sbjct: 221 GISGKMLYGYTAGLGTEVMLFGNVFARAEWEYIRFVN 257
>gi|331650258|ref|ZP_08351330.1| adhesin/virulence factor Hek [Escherichia coli M605]
gi|331040652|gb|EGI12810.1| adhesin/virulence factor Hek [Escherichia coli M605]
Length = 263
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSASY 203
G G A + + D + GR S LG G+ Y V DI+L SY
Sbjct: 165 GIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSY 224
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY+ SV+ + D + + +H LG+ +F
Sbjct: 225 RYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 263
>gi|51595793|ref|YP_069984.1| outer membrane protein A [Yersinia pseudotuberculosis IP 32953]
gi|108806724|ref|YP_650640.1| outer membrane protein A [Yersinia pestis Antiqua]
gi|108812705|ref|YP_648472.1| outer membrane protein A [Yersinia pestis Nepal516]
gi|145598823|ref|YP_001162899.1| outer membrane protein A [Yersinia pestis Pestoides F]
gi|149366590|ref|ZP_01888624.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162418551|ref|YP_001607555.1| outer membrane protein A [Yersinia pestis Angola]
gi|165924613|ref|ZP_02220445.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165940134|ref|ZP_02228667.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011945|ref|ZP_02232843.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211728|ref|ZP_02237763.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402334|ref|ZP_02307802.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419876|ref|ZP_02311629.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424140|ref|ZP_02315893.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170024855|ref|YP_001721360.1| outer membrane protein A [Yersinia pseudotuberculosis YPIII]
gi|186894876|ref|YP_001871988.1| outer membrane protein A [Yersinia pseudotuberculosis PB1/+]
gi|218928581|ref|YP_002346456.1| outer membrane protein A [Yersinia pestis CO92]
gi|229841410|ref|ZP_04461569.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843520|ref|ZP_04463663.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894379|ref|ZP_04509562.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|270486903|ref|ZP_06203977.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294503419|ref|YP_003567481.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|55976558|sp|Q8ZG77|OMPA_YERPE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|55977792|sp|P38399|OMPA_YERPS RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|51589075|emb|CAH20693.1| putative outer membrane porin A protein [Yersinia
pseudotuberculosis IP 32953]
gi|108776353|gb|ABG18872.1| outer membrane porin A protein [Yersinia pestis Nepal516]
gi|108778637|gb|ABG12695.1| putative outer membrane porin A protein [Yersinia pestis Antiqua]
gi|115347192|emb|CAL20086.1| putative outer membrane porin A protein [Yersinia pestis CO92]
gi|145210519|gb|ABP39926.1| outer membrane porin A protein [Yersinia pestis Pestoides F]
gi|149290964|gb|EDM41039.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162351366|gb|ABX85314.1| outer membrane protein A [Yersinia pestis Angola]
gi|165911957|gb|EDR30601.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923673|gb|EDR40805.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989112|gb|EDR41413.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207499|gb|EDR51979.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962617|gb|EDR58638.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048300|gb|EDR59708.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056989|gb|EDR66752.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169751389|gb|ACA68907.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis YPIII]
gi|186697902|gb|ACC88531.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis PB1/+]
gi|229689128|gb|EEO81191.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697776|gb|EEO87823.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703777|gb|EEO90793.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|262361462|gb|ACY58183.1| putative outer membrane porin A protein [Yersinia pestis D106004]
gi|262365389|gb|ACY61946.1| putative outer membrane porin A protein [Yersinia pestis D182038]
gi|270335407|gb|EFA46184.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294353878|gb|ADE64219.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|320015699|gb|ADV99270.1| outer membrane protein A [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 353
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 56/192 (29%), Gaps = 30/192 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + IN G G G+ Q + G
Sbjct: 29 YTGGKLGWSQY-QDTGSIINNDGPTHKDQLGAGAFFGY--QANQY-LGFEMGYDWLGRMP 84
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYG-MGGFGGAYVIDSSLEKVESDNSK 170
D K + + K Y V L +Y +GG S + S
Sbjct: 85 YKGDINNGAFKAQGV---QLAAKLSYPVAQDLDVYTRLGGLVWRADAKGSFDGGLDRASG 141
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S ++ +G +Y + + Y+++ N D E V + +
Sbjct: 142 HDT------GVSPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPD 185
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 186 NGLLSVGVSYRF 197
>gi|299773247|gb|ADJ38698.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 369
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 16/197 (8%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGKEQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
K+ + +S+++G G++Y + +++ Y+++ ++ + + D
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 207
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 208 TYSPDAHSVSAGISYRF 224
>gi|300815558|ref|ZP_07095782.1| porin protein, opacity family [Escherichia coli MS 107-1]
gi|300531487|gb|EFK52549.1| porin protein, opacity family [Escherichia coli MS 107-1]
Length = 249
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+ Y V DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 190 WSLGAGVRYDVTPDIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 249
>gi|209968906|gb|ACJ02814.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968938|gb|ACJ02830.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968940|gb|ACJ02831.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968948|gb|ACJ02835.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968950|gb|ACJ02836.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968952|gb|ACJ02837.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270695|gb|ADQ55748.1| OmpA [Haemophilus parasuis]
gi|312270697|gb|ADQ55749.1| OmpA [Haemophilus parasuis]
gi|312270699|gb|ADQ55750.1| OmpA [Haemophilus parasuis]
gi|312270701|gb|ADQ55751.1| OmpA [Haemophilus parasuis]
gi|312270703|gb|ADQ55752.1| OmpA [Haemophilus parasuis]
gi|312270705|gb|ADQ55753.1| OmpA [Haemophilus parasuis]
gi|312270707|gb|ADQ55754.1| OmpA [Haemophilus parasuis]
gi|312270709|gb|ADQ55755.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 43.3 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|315181647|gb|ADT88560.1| Outer membrane protein [Vibrio furnissii NCTC 11218]
Length = 189
Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 22/194 (11%)
Query: 58 YVGLHISRLYETHPL-------ADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
YVG + + T + I G+ Q + F +
Sbjct: 8 YVGGALGQARFDDASVSGTVMGYSTTQDLSLEDDKSTIASIFGGY--QFNRY-FALEGSV 64
Query: 111 TAAKDDSTFYRLKEKYFI-YGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDN 168
T D+ + + Y + K V D + ++ G V
Sbjct: 65 TG--IDALDGSVVTVGDMSYIAIQPKVSLPVTDHVSLFAKAGVAYFNAEIKVSNAVAG-- 120
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+ F + +LG+G++ + + AS+ Y+ + VN A + +E
Sbjct: 121 -YSGYSTFSDSDVTGILGLGVEVAATDNWHIRASWDYLRPELDVVNVGYANASIE----- 174
Query: 229 GNAHIASLGINMHF 242
+ ++ SLG++ HF
Sbjct: 175 TDINVFSLGVSYHF 188
>gi|271501514|ref|YP_003334540.1| OmpA domain-containing protein transmembrane region-containing
protein [Dickeya dadantii Ech586]
gi|270345069|gb|ACZ77834.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech586]
Length = 354
Score = 43.3 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 22/186 (11%)
Query: 58 YVGLHISRLYETHP-LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + L T + G G G+ Q + G
Sbjct: 29 YAGGKLGWSQYHDTNLTGNGYNATNAAQNQLGAGAFGGY--QANQY-LGFEMGYDWLG-- 83
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
R+K G + G + + L Y + Y +D+ N+
Sbjct: 84 ----RMKYNGGNQGSFKAQ-GIQLAAKLSYPIVDDLDVYTRLGGFVW-RADSHDNSGRND 137
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+ G S + +G++Y + + + Y+++ N +A + V + + + S+
Sbjct: 138 NDTGVSPLAAVGVEYAITKNWATRLDYQWVN------NIGDAAT----VGGRPDNGLLSV 187
Query: 237 GINMHF 242
G++ F
Sbjct: 188 GVSYRF 193
>gi|209968920|gb|ACJ02821.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 43.3 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|209968912|gb|ACJ02817.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714271|gb|ACN62130.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 43.3 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 34/191 (17%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + I G G G+ Q+ +V G
Sbjct: 29 YAGGKLG--WSQFHDTGFIPNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY V D L +Y G G + DSS D+
Sbjct: 84 YKGDTVNGAFKAQGV---QLTAKLGYPVTDDLDVYTRLG-GMVWRADSSSNIGGDDHDT- 138
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G+++ + DI+ Y+++ N +A++ V + +
Sbjct: 139 --------GVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDAQT----VGARPDN 180
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 181 GMLSVGVSYRF 191
>gi|209968914|gb|ACJ02818.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANRYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591]
gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein
[Dickeya zeae Ech1591]
Length = 355
Score = 42.9 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 58/186 (31%), Gaps = 22/186 (11%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G + Y L T + G G G+ Q + G
Sbjct: 29 YAGGKLGWSQYHDSGLNGNGYNVTNAAQNQLGAGAFGGY--QANPY-LGFEMGYDWLG-- 83
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
R+K G + G + + L Y + Y + +
Sbjct: 84 ----RMKYNGGNQGSFKAQ-GIQLAAKLSYPIVDDVDVYTRLGGFVWRADSHDNSGLNDH 138
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
D G S + +G++Y + + + Y+++ N +A + V + + + S+
Sbjct: 139 D-TGVSPLAAVGVEYAITKNWATRLDYQWVN------NIGDAST----VGGRPDNGLLSV 187
Query: 237 GINMHF 242
G++ F
Sbjct: 188 GVSYRF 193
>gi|299773237|gb|ADJ38693.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 362
Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANRYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|261345491|ref|ZP_05973135.1| adhesin/virulence factor Hek [Providencia rustigianii DSM 4541]
gi|282566541|gb|EFB72076.1| adhesin/virulence factor Hek [Providencia rustigianii DSM 4541]
Length = 244
Score = 42.9 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 26/203 (12%)
Query: 64 SRLYETHPLADTINRKTYNS----LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
+ + AD + T N G G+ LG++ F + D
Sbjct: 44 GQQFVYSGYADAGDNGTKNGDSHRTGVFGGGLALGYDF-SNQFDIPVRAELEFMARDKAN 102
Query: 120 YRL----KEKYFIYGDVVLKAGYSVDSLLI--------------YGMGGFGGAYV--IDS 159
+ + ++ +K +++L++ Y G G A V +
Sbjct: 103 STYNIRDRVRNGVHQTRDIKNQIKLNTLMVNGYYDIKNSSNFTPYISVGLGYAAVDFKTT 162
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ S + + + +G G++Y +N D + SYRY+ + +
Sbjct: 163 RADSYTPGLSLHDTHTHTANNFAWSVGAGVNYAINDDWDMGLSYRYLDAGKADITTAVGD 222
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ K A+ LG+ F
Sbjct: 223 GENTS-KIKVKANDIMLGLTYRF 244
>gi|323970364|gb|EGB65633.1| OmpA family protein [Escherichia coli TA007]
Length = 238
Score = 42.9 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 142 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 201
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 202 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 238
>gi|170680671|ref|YP_001746676.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5]
gi|218698021|ref|YP_002405688.1| exported surface protein precursor [Escherichia coli 55989]
gi|170518389|gb|ACB16567.1| heat resistant agglutinin 1 [Escherichia coli SMS-3-5]
gi|218354753|emb|CAV01825.1| exported surface protein precursor [Escherichia coli 55989]
gi|324019247|gb|EGB88466.1| OmpA-like transmembrane domain protein [Escherichia coli MS 117-3]
Length = 263
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSASY 203
G G A + + D + GR S LG G+ Y V DI+L SY
Sbjct: 165 GIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSY 224
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY+ SV+ + D + + +H LG+ +F
Sbjct: 225 RYLDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 263
>gi|331678985|ref|ZP_08379657.1| adhesin/virulence factor Hek [Escherichia coli H591]
gi|331073050|gb|EGI44373.1| adhesin/virulence factor Hek [Escherichia coli H591]
Length = 245
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+ Y V DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 186 WSLGAGVRYDVTPDIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 245
>gi|299773233|gb|ADJ38691.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 368
Score = 42.9 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|299773241|gb|ADJ38695.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773245|gb|ADJ38697.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 19/197 (9%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG GA ++ + + ++++
Sbjct: 96 VRGKEQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGK---VGAALVRNDYKFYDTEDK 150
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
+ +S++LG G++Y + +++ Y+++ ++ + + D
Sbjct: 151 AHNL------KTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 204
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 205 TYSPDAHSVSAGISYRF 221
>gi|209968918|gb|ACJ02820.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968922|gb|ACJ02822.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714277|gb|ACN62133.1| outer membrane protein A [Haemophilus parasuis]
gi|224714281|gb|ACN62135.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 42.9 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 19/197 (9%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG GA ++ + + ++++
Sbjct: 96 VRGKEQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGK---VGAALVRNDYKFYDTEDK 150
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
+ +S++LG G++Y + +++ Y+++ ++ + + D
Sbjct: 151 AHNL------KTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 204
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 205 TYSPDAHSVSAGISYRF 221
>gi|260775745|ref|ZP_05884641.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608161|gb|EEX34330.1| putative outer membrane protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 195
Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 65/196 (33%), Gaps = 28/196 (14%)
Query: 55 SGNYVGLHISRL-------YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN 107
+ Y+GL + + + P+ T + + + G+ + ++ I
Sbjct: 20 ANGYLGLSAGQARFDNIQGHLSSPIYSTSQSLEISDDDSPAIKLFGGY--EFNQYIA-IE 76
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
D + + V K + ++ GGF S S
Sbjct: 77 GSIGGY-DALDGQTVSVGDMKFAAVQAKGMLPIGEQFNLFAKGGFAYFGAEFKSNLYTVS 135
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D + K G+G +Y + ++ + A + Y+ + + +A + ++
Sbjct: 136 DETVTGK-----------FGLGAEYALTPNVRVMAEWEYMKPELDLLKAGSATASID--- 181
Query: 227 RKGNAHIASLGINMHF 242
++ SLG++ HF
Sbjct: 182 --AEINVLSLGVSYHF 195
>gi|209968908|gb|ACJ02815.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714283|gb|ACN62136.1| outer membrane protein A [Haemophilus parasuis]
Length = 369
Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 16/197 (8%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGKEQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
K+ + +S+++G G++Y + +++ Y+++ ++ + + D
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 207
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 208 TYSPDAHSVSAGISYRF 224
>gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 368
Score = 42.9 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 33/178 (18%)
Query: 78 RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVL--- 134
+ T S GLG G+ + G ++ L + G+
Sbjct: 56 QNTGTSKDALGLGAFAGYQLNPN---LGFEFGYDWLGKYTSSGELS-GVRVEGEAKSQMI 111
Query: 135 ----KAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF-----DGHGSSVV 184
K G+ V+ L +YG G G A+ +S+ S F D HG+ V
Sbjct: 112 QATMKIGFPVNDALDLYGRIGGGYAWT--------DSELSARTATDFIKETGDKHGAVFV 163
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+G +Y ++ D + Y+Y + ++R + + + S+G+ F
Sbjct: 164 GALGAEYAIDRDWAARLEYQY--------TTPLGDASLDRSGIEMDNGLLSVGMLYRF 213
>gi|15420182|gb|AAK97313.1|AF308171_1 Pap31 [Bartonella quintana phage]
Length = 228
Score = 42.9 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 52/200 (26%), Gaps = 49/200 (24%)
Query: 50 EYGIWSGNYVGLHISRLYETHPL------ADTINRKTYNSLLPNGLGIELGHNIQLED-F 102
W+G Y+G I + + ++ L GI G NI L
Sbjct: 28 PNFSWTGFYIGGQIGNFTSDNKIKGLGKETSIFTKELTPQLSGIVGGIYAGSNIDLGSGL 87
Query: 103 VFGINCHT-------------------------------------TAAKDDSTFYRLKEK 125
+ G+ +++D+ K
Sbjct: 88 ILGVETDAIWADCEATKTSAIRTLSVPQANSLNDEFKAAGITLKDKFSENDTMSDHYTYK 147
Query: 126 YFIYGDVVLKAGYS-VDSLLIYGMGGFGGAYV----IDSSLEKVESDNSKNAKGRFDGHG 180
G + G+S D ++ Y GG A + S + ++
Sbjct: 148 AKWSGATRARIGFSAFDRVMPYFAGGVAYARMQGMKSVSGMNAAKNKKLGGGLYDETKMM 207
Query: 181 SSVVLGIGLDYMVNYDISLS 200
+ G+D + ++ L
Sbjct: 208 VGFTVSGGVDVAMTGNVLLR 227
>gi|298292960|ref|YP_003694899.1| porin opacity type [Starkeya novella DSM 506]
gi|296929471|gb|ADH90280.1| porin opacity type [Starkeya novella DSM 506]
Length = 222
Score = 42.9 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 36/243 (14%)
Query: 7 GALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRL 66
G L V+F ++ + +D+ + + ++ + + SG Y+ + +
Sbjct: 4 GLLAAVMFPAVTAKAADVGLDMGA-------DMSAEDLLAKAPKLEETSGWYLRGDVGYV 56
Query: 67 YETHP-LADTI-------NRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDS 117
+ P A+ + G G+ L +++ + A +
Sbjct: 57 FNELPDWAEVPIFPVILSPELDDAWMFGIGAGVRLNDVWRIDVTADYRTKADYAALGLSA 116
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ +Y D+ + +L Y G GG Y+ S +E + + G D
Sbjct: 117 DYSTTTILANVYADLG-----TWSNLTPYVGAGIGGGYISASDIEALGV-----SVGDID 166
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G G + L G+ + + L YRY+ + ++ +AH +G
Sbjct: 167 GWGFAWALMGGVAVNLAPNWQLDLGYRYVNLDDVTNT----------LNFHQSAHEVRVG 216
Query: 238 INM 240
+
Sbjct: 217 VRY 219
>gi|301306585|ref|ZP_07212647.1| hypothetical protein HMPREF9347_05194 [Escherichia coli MS 124-1]
gi|300838203|gb|EFK65963.1| hypothetical protein HMPREF9347_05194 [Escherichia coli MS 124-1]
Length = 235
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 139 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 198
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 199 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 235
>gi|300977693|ref|ZP_07174016.1| conserved domain protein [Escherichia coli MS 45-1]
gi|300409817|gb|EFJ93355.1| conserved domain protein [Escherichia coli MS 45-1]
Length = 158
Score = 42.5 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 62 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 121
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 122 LDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 158
>gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12]
gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12]
Length = 335
Score = 42.5 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 14/88 (15%)
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ +L ++ + DG ++GIGL+Y + Y+Y
Sbjct: 111 FGKAGTLRWDGENSGPFSYDSDDGWSP--MVGIGLEYKLTPSWVARVEYQYFD------- 161
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
S + N H SLG++ F
Sbjct: 162 -SVGSDKLGG----SNMHFTSLGLSYRF 184
>gi|323971797|gb|EGB67023.1| heat resistant agglutinin 1 [Escherichia coli TA007]
Length = 242
Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
LG G+ Y V DI+L SYRYI SV+ + D + + +H LG+ +F
Sbjct: 183 WSLGAGVRYDVTPDIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 242
>gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 326
Score = 42.5 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 22/154 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC---HTTAAK 114
Y+G + T+ + G G+ G+ Q+ + F + H AK
Sbjct: 27 YIGARAGASFLTNMDDAVTSVSEIQDTNFTG-GVFAGY--QVTPW-FALETGYTHLGNAK 82
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D+ + + D+V K Y++ D++ I+ G ++SDN
Sbjct: 83 LDNKQGSYEAQG---ADLVTKFSYAISDNVDIFAKAGAFYYDWNAIGSGVIKSDN----- 134
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G S G GL+Y +N S Y+Y
Sbjct: 135 ----GWSS--TAGAGLEYFINKSFSTRLEYQYYN 162
>gi|331654483|ref|ZP_08355483.1| adhesin/virulence factor Hek [Escherichia coli M718]
gi|331047865|gb|EGI19942.1| adhesin/virulence factor Hek [Escherichia coli M718]
Length = 246
Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 150 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWNLGAGVRYDVTPDIALDLSYRY 209
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 210 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 246
>gi|301020993|ref|ZP_07185044.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1]
gi|300398367|gb|EFJ81905.1| OmpA-like transmembrane domain protein [Escherichia coli MS 69-1]
Length = 251
Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
SD S +D + + +G G+ Y + DI+L SYRY+ S++ +A+ D +
Sbjct: 176 SDISALHYSGYD-NNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKS 234
Query: 226 DRKGNAHIASLGINMHF 242
+ + G+ +F
Sbjct: 235 EADVKSRDIMFGVTYNF 251
>gi|299773249|gb|ADJ38699.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYANDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|209968928|gb|ACJ02825.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714287|gb|ACN62138.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYANDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|110644632|ref|YP_672362.1| OmpA family protein [Escherichia coli 536]
gi|191170621|ref|ZP_03032173.1| heat resistant agglutinin 1 [Escherichia coli F11]
gi|110346224|gb|ABG72461.1| OmpA family protein [Escherichia coli 536]
gi|190908845|gb|EDV68432.1| heat resistant agglutinin 1 [Escherichia coli F11]
gi|307556443|gb|ADN49218.1| adhesin/virulence factor Hek [Escherichia coli ABU 83972]
Length = 246
Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 150 GYARIHQKTTGISTWDYEYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 209
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 210 LDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGMTYNF 246
>gi|209968924|gb|ACJ02823.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 42.5 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 76/197 (38%), Gaps = 19/197 (9%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG GA ++ + + ++++
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLNGLDVYGK---VGAALVRNDYKFYDTEDK 150
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
+ +S++LG G++Y + +++ Y+++ ++ + + D
Sbjct: 151 AHNL------KTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 204
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 205 TYSPDAHSVSAGISYRF 221
>gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 326
Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC---HTTAAK 114
YVG + T+ + D + T G+ G+ Q+ + F + H A+
Sbjct: 27 YVGARAGASHITN-MDDAVTSVTKLEDTNFAGGVFAGY--QVTPW-FALETGYTHLGNAE 82
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D+ + + D+V K Y++ DS+ I+ G A+ D + NS N
Sbjct: 83 LDNKQGSYEAQG---ADLVTKFSYAISDSVDIFAKAG---AFYYDWNAIGSGVSNSDN-- 134
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G G G++Y +N ++S Y+Y
Sbjct: 135 ----GWSP--TAGAGIEYFINKNVSTRLEYQYYN 162
>gi|92116695|ref|YP_576424.1| hypothetical protein Nham_1117 [Nitrobacter hamburgensis X14]
gi|91799589|gb|ABE61964.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
Length = 274
Score = 42.5 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 39/224 (17%), Positives = 62/224 (27%), Gaps = 58/224 (25%)
Query: 52 GIWSGNYVGLHISRLYETHPLA----------------------DTINRKTYNSLLPNGL 89
+W G YVG + S+ +G
Sbjct: 41 TVWQGYYVGGQAGVGESDMNFTGATRNVAARLLSGTAIENSGQVSSWPLGGKASVRGDGW 100
Query: 90 GIELGHNIQLEDFVFGIN-----CHTTAAKDDSTFYRLKEKYFI---------------- 128
G +G+N Q +D V G+ ++ DS +
Sbjct: 101 GGFVGYNSQWDDVVIGVEANYMHGKFGGSRSDSMSRFFTDSLGYTDGVTYQSTATMSISD 160
Query: 129 YGDVVLKAGYSVDSLLIYGMGG--FGGAYVIDSSLEKVESDNSKNA-------------K 173
G + +AGY V + L Y GG G A ++ S+ N A
Sbjct: 161 MGTLRARAGYVVGAFLPYMFGGVALGQADIVRSAHIFGTQVNPAAAPGFTNVPFNVSGTD 220
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
G++ G+GLD + + + YI N N
Sbjct: 221 GKYSHLIYGYSAGVGLDVNLIGGLFARVEWEYIRFTSSIDTNVN 264
>gi|224714303|gb|ACN62146.1| outer membrane protein A [Haemophilus parasuis]
gi|224714305|gb|ACN62147.1| outer membrane protein A [Haemophilus parasuis]
gi|224714307|gb|ACN62148.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 42.5 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|49182350|gb|AAT57677.1| OmpA [Pasteurella multocida]
Length = 351
Score = 42.5 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 63/196 (32%), Gaps = 17/196 (8%)
Query: 57 NYVGLHISRLYETHP---LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
YVG D T G+ G+ I V A
Sbjct: 28 FYVGAKAGWASFHDSLNQFNDITEPATGFKRNSVTYGVFGGYQITDNFAVELGYDDFGRA 87
Query: 114 KDDSTFYRLKEKYFI-----YGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
K +T + KE +G + LKA Y V D L +Y G +K +
Sbjct: 88 KARATDPKTKETVDAAKHTNHGAHLSLKASYPVLDGLDVYARVGAALVRSDYKVYDKEPA 147
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D S + V GL+Y +++L Y+++ + + ERVD
Sbjct: 148 DLSFLKRTHSTQVSP--VFAGGLEYAFMPELALRVEYQWLNNVGKLKDAKG-----ERVD 200
Query: 227 RKGNAHIASLGINMHF 242
+ + + G++ F
Sbjct: 201 YRPDIGSVTAGLSYRF 216
>gi|299773243|gb|ADJ38696.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 42.5 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 17/224 (7%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYGI-----WSGNYVGLH-ISRLYETHPLADTINRKTY 81
L L + +N Q D + + W+ + ++ ++ Y+ T
Sbjct: 5 LIALAVSGLAVASVSNAAPQADSFYVGAKAGWATFHNDINQLNFKYKNDARYATSANGYG 64
Query: 82 NSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFYRLKEKYFIYGD-VVLKAGYS 139
+ G+ G+ I V G + + F K +G + LK Y
Sbjct: 65 INRNSVTYGVFGGYQIIDNLAVELGYDYFGRVRGNKQEFREFKHSA--HGTHLSLKPSYE 122
Query: 140 VDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDIS 198
V S L +YG G + K+ + +S+++G G++Y + +++
Sbjct: 123 VLSGLDVYGKVGAALVRNDYKRY-FQTREPVKSHNLK-----TSLIVGAGVEYAILPELA 176
Query: 199 LSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+++ + + ++ + ++H + GI+ F
Sbjct: 177 FRVEYQWLSNVGNFTKAEMKENRRATYNYSPDSHSVTAGISYRF 220
>gi|209968910|gb|ACJ02816.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968944|gb|ACJ02833.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714273|gb|ACN62131.1| outer membrane protein A [Haemophilus parasuis]
gi|224714279|gb|ACN62134.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 42.5 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|209968962|gb|ACJ02842.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 42.5 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|463911|gb|AAC13751.1| heat resistant agglutinin 1 [Escherichia coli]
Length = 264
Score = 42.5 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S ++ + LG G+ Y V DI+L SYRY+ SV+ + D
Sbjct: 185 GYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEWGDK 244
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + +H LG+ +F
Sbjct: 245 YKSEVDVKSHDIMLGVTYNF 264
>gi|209968954|gb|ACJ02838.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 42.5 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 351
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 27/190 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + ++IN ++ P+ G Q + G
Sbjct: 29 YVGGKLGWSHYYD---NSINHFGSTNVRPDQFGGGAFFGYQANPY-LGFEMGYDWLG--- 81
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR-- 175
R++ + G + G + + L Y + Y + +D S N+ +
Sbjct: 82 ---RMEYRGDNNGAFKSQ-GVQLAAKLSYPIADDLDIYTRLGGMVW-RADGSANSATKGR 136
Query: 176 -FDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D + + V + IG++Y +N D + Y+++ N +A R D
Sbjct: 137 YIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFVS------NIGDANETAARPDNT---- 186
Query: 233 IASLGINMHF 242
+ S+G+ F
Sbjct: 187 LLSVGVTYRF 196
>gi|254474292|ref|ZP_05087682.1| hypothetical protein PJE062_2423 [Pseudovibrio sp. JE062]
gi|211956666|gb|EEA91876.1| hypothetical protein PJE062_2423 [Pseudovibrio sp. JE062]
Length = 219
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 7/127 (5%)
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE--KVESDNSKNAKGRFDGHG 180
K K + V A D L F G +S + KV DN+
Sbjct: 93 KVKKGSFSAVHASASVYFDYSLTESFTPFIGIGAGLASFDMGKVTIDNAHWGYPSETYEV 152
Query: 181 SSVV-----LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
V L G Y + ++S+ Y ++ + NA + + +HIA
Sbjct: 153 QESVTPFLKLNAGAAYKLTDNLSVVGEYNFMQSADFEFSAKNAPAGSPDITTSFQSHIAQ 212
Query: 236 LGINMHF 242
+G+ +F
Sbjct: 213 VGLRYNF 219
>gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 335
Score = 42.1 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 48/151 (31%), Gaps = 15/151 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + D ++ + G G+ G+N + + F + T
Sbjct: 27 YAGFRVGATHYNDISVDGVDSNSAFDRDDMGGGLFAGYN--VTPW-FAVETGYTWLGRAE 83
Query: 118 TFYRLKEKYFIYG-DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
K + D+V K + + D + +Y G + +
Sbjct: 84 FNNDYKMRVDQQAIDLVGKFTWHATDYMGLYAKLGGAYYFSEAKGF----------GAEK 133
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ G G GL++ ++ +S Y+Y
Sbjct: 134 YKDDGVVGTAGAGLEFFLDDHLSARLEYQYY 164
>gi|294851522|ref|ZP_06792195.1| predicted protein [Brucella sp. NVSL 07-0026]
gi|294820111|gb|EFG37110.1| predicted protein [Brucella sp. NVSL 07-0026]
Length = 87
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 12/97 (12%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG A+ + ++ + S +K + + +G G+DY ++ L YRY
Sbjct: 3 YIAGGV--AFGGIKNSLRIGGEESSKSKTQ-----TGWTVGAGIDYAATDNVLLRLEYRY 55
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N + + LG+ F
Sbjct: 56 TDY-----GKKNFGLNDLDTRGSFKTNDIRLGVAYKF 87
>gi|312270711|gb|ADQ55756.1| OmpA [Haemophilus parasuis]
gi|312270713|gb|ADQ55757.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 42.1 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|299134642|ref|ZP_07027834.1| conserved hypothetical protein [Afipia sp. 1NLS2]
gi|298590452|gb|EFI50655.1| conserved hypothetical protein [Afipia sp. 1NLS2]
Length = 486
Score = 42.1 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 27/175 (15%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-----LGIELGHNIQLED-FV 103
W+G YV + T + G + LG++ QL +V
Sbjct: 35 PVSNWTGFYVTGGFGYGLMSSDQHSTTGGAATSVDTRTGGRGYFGTVGLGYDYQLTPAWV 94
Query: 104 FGINCH-------TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAY 155
G+ + + K + GY V ++L Y G+
Sbjct: 95 VGVFGDAQWGDIRGDLIDITTPGISGRLKNDAAYSAGARLGYLVAPNVLSYVNAGYSYGQ 154
Query: 156 VIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN------YDISLSASYR 204
S+ + K+ + +G G++ +N + YR
Sbjct: 155 FKGSTFSDGVTAIDKSHRD-------GWFIGGGVENDLNFFGIKAPGWFMKTEYR 202
>gi|209968898|gb|ACJ02810.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 42.1 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATSANRYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V S L +YG G +
Sbjct: 96 VRGNKQEFREFKHSA--HGTHLSLKPSYEVLSGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|262403402|ref|ZP_06079961.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262350394|gb|EEY99528.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 332
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 34/188 (18%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
+VG+ + + N ++ L GL + L + + A +
Sbjct: 24 IFVGVKGGYQWVLDENYNHSNPESAILGLYGGLQFTPSWSWDLG-YQYHDELKADATSVN 82
Query: 117 STFYRLKE--KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ ++ +Y Y D+L +YG G + + L +SK+
Sbjct: 83 VKTWLIESALRYDW---------YLRDNLSLYGRLGAAYWDMEKTKL-----SSSKSDAT 128
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
F G IG++Y N ++ LS Y+YI S+ SN K ++H
Sbjct: 129 GFSPLGE-----IGINYHFNPNVRLSTGYQYID----SIGKSN--------TGKYDSHGL 171
Query: 235 SLGINMHF 242
+ + F
Sbjct: 172 LVSLTYTF 179
>gi|299773251|gb|ADJ38700.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|209968902|gb|ACJ02812.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968930|gb|ACJ02826.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714289|gb|ACN62139.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLKTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|94266061|ref|ZP_01289780.1| Twin-arginine translocation pathway signal [delta proteobacterium
MLMS-1]
gi|93453383|gb|EAT03811.1| Twin-arginine translocation pathway signal [delta proteobacterium
MLMS-1]
Length = 234
Score = 42.1 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 59/198 (29%), Gaps = 15/198 (7%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YV +I A + + G+ LG + + + K
Sbjct: 41 GYYVSGNIGVAMPRDSTATYPDTPGLSQKYDFDSGLALGLALGYKLGPARVEGEIAYQKS 100
Query: 116 DSTFYRLK----------EKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
D + GD + + F L KV+
Sbjct: 101 DIDDITVSQAGTSTSLSAAGVQFSGDAKATSFLLNGYYDFHNNSAFTPYLTAGLGLAKVK 160
Query: 166 SDNSKNAKGRFDGHGS-SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ + D + +G+G +Y +N +SL A YRY+ S + +
Sbjct: 161 VSQTVVGQPWSDSDTVFAYQVGVGTEYALNQTVSLDARYRYLATADPSFSADDGSP---- 216
Query: 225 VDRKGNAHIASLGINMHF 242
+D + +H G+ + F
Sbjct: 217 IDAEFASHNLLFGVRVSF 234
>gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
Length = 356
Score = 42.1 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 25/191 (13%)
Query: 58 YVGLHISRLYETHPLADTI---NRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N G G +G+ Q + G
Sbjct: 29 YTGAKLGWSQYHDTGYYGHGYENNDGPTHESQLGAGAFVGY--QANPY-LGFEMGYDWLG 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ F V L A S D L +Y G N
Sbjct: 86 RMPNKGNVTNGAFKAQGVQLAAKLSYPINDDLDVYTRLG------GMVWRADATQTNQTT 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S + +G++Y + + + Y+++ N +A++ V + +
Sbjct: 140 GRISDHDTGVSPLAAVGVEYALTQNWATRLDYQWVN------NIGDAQT----VGARPDN 189
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 190 GMLSVGVSYRF 200
>gi|120599910|ref|YP_964484.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146292153|ref|YP_001182577.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560003|gb|ABM25930.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145563843|gb|ABP74778.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425449|gb|ADV53523.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 366
Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 15/178 (8%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + H + P I G+ D+ + D
Sbjct: 29 YVGAGLGVNNYEHIATQNGDD------NPYAWDIFAGY--MFNDYFGAEIGYRDLGNADW 80
Query: 118 TFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + G + G + + G + +S + + S +
Sbjct: 81 TTSGISNDADVKGATLGLVGLWPLANRWSLSAEAGAMYYTLENSQRDTISGARSSYSSDD 140
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
F + G G+ Y ++ L A YR + N A S+ ++
Sbjct: 141 FAPY-----FGAGIGYNFTDNLKLQAKYRRYENLDDKYNIVEADSNYWGLELSYRFGT 193
>gi|262368825|ref|ZP_06062154.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316503|gb|EEY97541.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 426
Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 9/140 (6%)
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ A F +E G YSV +L GF S+ VE
Sbjct: 215 VRYGFNLAPATKLFIAAEEGNSNSGSSDAAIKYSVPNLTAKLTQGFADGKGSVSARALVE 274
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+ S N + + G++Y V + LSA Y+ + + ++ SN+ V
Sbjct: 275 NYKSANDS------DTGWGVAAGVNYQVMDPLKLSADVSYVDGNSNYLHGSNSAYVVNTS 328
Query: 226 DRK---GNAHIASLGINMHF 242
+ K A +G F
Sbjct: 329 NGKIAQNEAFGVQVGGTYKF 348
>gi|463912|gb|AAC13752.1| heat resistant agglutinin 1 [Escherichia coli]
Length = 250
Score = 42.1 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S ++ + LG G+ Y V DI+L SYRY+ SV+ + D
Sbjct: 171 GYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEWGDK 230
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + +H LG+ +F
Sbjct: 231 YKSEVDVKSHDIMLGVTYNF 250
>gi|317407227|gb|EFV87210.1| TPR repeat-containing protein [Achromobacter xylosoxidans C54]
Length = 778
Score = 42.1 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 25/173 (14%)
Query: 28 LYLPRKIDLF---NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSL 84
+ PR D F N A+ Y+ D S + + T
Sbjct: 569 ILTPRSTDTFCGLNSANQTAHYKADA------------GSGGWLAYVTYGLYEGTTLRID 616
Query: 85 LPNGLG----IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV 140
P+ ++ G++ Q F + + T DS +LK +G L+ G S
Sbjct: 617 RPDWFTMEGYVQAGYSWQDMPARFWLRDNATGKDSDSVRGKLKRDQA-FGAGELRIGRSY 675
Query: 141 -----DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
L++ G GA + ++ + ++ G+GSS LG G
Sbjct: 676 RLDAISEKLVFFPYGVIGADWLWTNNKVTGVQLGDSSTHPLQGNGSSWSLGAG 728
>gi|312270719|gb|ADQ55760.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 42.1 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNSKYENDVRYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|56552386|ref|YP_163225.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260753935|ref|YP_003226828.1| outer-membrane immunogenic protein precursor; secreted protein
[Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56543960|gb|AAV90114.1| hypothetical protein ZMO1490 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258553298|gb|ACV76244.1| putative outer-membrane immunogenic protein precursor; putative
secreted protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 204
Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 17/149 (11%)
Query: 78 RKTYNSLLPNGLGIELGHNIQLED-FVFGINC----------HTTAAKDDSTFY--RLKE 124
R G G G + Q+ FV G +T +
Sbjct: 45 RANGVGQNNMGYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATTGNGGSVST 104
Query: 125 KYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K F D ++ G+ +L+Y +GG+ + R G
Sbjct: 105 KAFQEWDASIRMGFLAQPDILLYAVGGYA---TTRERTLYTGVGGTGVGGYRNVGWSDGY 161
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+G G++Y ++ ++A YRY H+
Sbjct: 162 SVGGGVEYSISKMFFMNAQYRYSQFSNHT 190
>gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 356
Score = 42.1 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 31/185 (16%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + D T G GI G+N + FGI + D
Sbjct: 28 YVGAKVGMGWLDSACVD----GTKCDDDAIGAGIYSGYNFSDK---FGIELSSDFLGDYK 80
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T + + D + ++ +Y + V ++ + + G D
Sbjct: 81 TSFTKNGTTSQFSDPI----IAISLTPMYRLA------VQQEFDVFFKAGPAYISHGGED 130
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ GIGL+ ++ D ++ Y+Y N D+ N+++ S+G
Sbjct: 131 --DVVLSAGIGLEKQLSSDWAVRVEYQYFDDFDD-----NYVQDL-------NSNLLSVG 176
Query: 238 INMHF 242
++ +F
Sbjct: 177 VSYNF 181
>gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36]
gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36]
Length = 327
Score = 41.7 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 49/180 (27%), Gaps = 31/180 (17%)
Query: 57 NYVGLHISRLYET---HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y+G + + P + ++ G+ G+ Q + F +
Sbjct: 27 FYLGAKLGVNHYQNGCQPWNVSCDKTDEAG------GVYGGY--QFNQY-FALEAAYLHL 77
Query: 114 KDDSTFYRL-----KEKYFIYGDVVLKAGYS--VDSLLIYGMGGFGGAYVIDSSLEKVES 166
D Y + + G + G D ++ GG + +
Sbjct: 78 GDAVAVYPVNGLNQTYTGTMQGLELSALGLLPITDRFSLFAKGGVYNWHATNDG------ 131
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERV 225
R G S G+GL Y ++ Y+Y V S+ + +
Sbjct: 132 -----PHQRIKESGLSPTAGLGLSYQLSISWQARLEYQYFYELGNEEVGGSHGQLTTLGI 186
>gi|157164523|ref|YP_001467011.1| putative outer membrane protein [Campylobacter concisus 13826]
gi|112800041|gb|EAT97385.1| putative outer membrane protein [Campylobacter concisus 13826]
Length = 199
Score = 41.7 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 55/145 (37%), Gaps = 16/145 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL----EDFVFGINCHTTAA 113
+VG+ + ++ A + N K+ GLGI+ G++ + +++ +
Sbjct: 25 FVGVEGDYSFNSNLTAKSDNGKSKAKKAQPGLGIKAGYDFDVARVYGAYIYDFQAKKSLG 84
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+D T + FI G + D LI G + K++ D
Sbjct: 85 DEDGTVVKWNTHKFIVGA-DYTPSVAKDLKLILG---------GYTGFSKLKLDVFDTHD 134
Query: 174 GRFDGHGSSVVLGI--GLDYMVNYD 196
G G+ + +LG G +Y +N +
Sbjct: 135 GSEKGNATGWILGARVGAEYSINEN 159
>gi|284922912|emb|CBG36001.1| heat resistant agglutinin 1 [Escherichia coli 042]
Length = 263
Score = 41.7 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSASY 203
G G A + + D + GR S G G+ Y V DI+L SY
Sbjct: 165 GIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSFGAGVRYDVTPDIALDLSY 224
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY+ SV+ + D + + +H LG+ +F
Sbjct: 225 RYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 263
>gi|89074664|ref|ZP_01161129.1| outer membrane protein, putative [Photobacterium sp. SKA34]
gi|89049602|gb|EAR55162.1| outer membrane protein, putative [Photobacterium sp. SKA34]
Length = 189
Score = 41.7 bits (96), Expect = 0.082, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 57/189 (30%), Gaps = 24/189 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G Y+G + N L G+ G+N G+
Sbjct: 24 TGPYIGASVGNATTDLKADHWEYNYDENVL---AYGVYGGYNFTEN---LGLEATLGQTG 77
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + Y + + + D L ++ G +D + N +
Sbjct: 78 EQDNIKK------GYATLTPRLMMPINDQLSLFAKAGVAYV-AVDGDYDGAGDIN----R 126
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D G G G+++ V + L A Y+ + +N + ++ +
Sbjct: 127 HDIDVDGFGWTAGAGVNFAVAEHVDLRAGIDYLSTDLEKADND------KDLNIDSETTM 180
Query: 234 ASLGINMHF 242
+G+N +F
Sbjct: 181 YYVGVNYNF 189
>gi|86553066|gb|ABC72124.2| heme-binding phage-associated protein [Bartonella henselae phage
60457]
Length = 171
Score = 41.7 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 17/112 (15%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 1 IALISASAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 52
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
N+K ++ P+G GI G N+ L + + G+ A +
Sbjct: 53 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDA 103
>gi|39995873|ref|NP_951824.1| tia invasion determinant-related protein [Geobacter sulfurreducens
PCA]
gi|39982637|gb|AAR34097.1| tia invasion determinant-related protein [Geobacter sulfurreducens
PCA]
Length = 224
Score = 41.7 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 22/203 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPN-------GLGIELGHNIQLEDFVFGINC 108
G YV + +I+ + + +G G++ F
Sbjct: 28 GGYVSGFFGVSAASDADVTSIDNQFGDVFNDRVEYDPNIYVGGTGGYD--FGHFRLEGEL 85
Query: 109 HTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSL 161
A+ D T +R + G + A VD + + G G + + S
Sbjct: 86 SYKHAEISSITDDTGFRFRGVDGNLGALAFMANAFVDLHNNTPVTPYFGGGIGFAVLSLS 145
Query: 162 EKVESDNSKNA--KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ SD S D + G G++ +N +SL YRY + +
Sbjct: 146 DTYGSDTSGRLLLYPEDDTTVFAYQAGGGVEIAINPSLSLDLGYRYFGTTKGTFD----S 201
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ K +H +G + F
Sbjct: 202 DWITTTKLKYESHNGMVGFRVKF 224
>gi|330447676|ref|ZP_08311324.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491867|dbj|GAA05821.1| ompA-like transmembrane domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 186
Score = 41.7 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 56/189 (29%), Gaps = 27/189 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVG + + N + G+ G+N G+
Sbjct: 24 TGPYVGASLGNATTDLKAENWNYNYDENVV---AYGLYGGYNFTEN---LGLEATLGQTG 77
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
+ + Y + + + D ++ G + + +
Sbjct: 78 EKDNIKK------GYATLTPRVMLPLNDQFSLFAKAGVA--------YVAADGNWQDIKR 123
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D G G G+++ V + + A Y+ + + +N + ++ +
Sbjct: 124 AHIDVDGWGWTAGAGVNFAVAEHVDIRAGIDYLSTDLKNADND------KDLNLDSETTM 177
Query: 234 ASLGINMHF 242
+G+N +F
Sbjct: 178 YYVGVNYNF 186
>gi|183601089|ref|ZP_02962582.1| hypothetical protein PROSTU_04716 [Providencia stuartii ATCC 25827]
gi|188019431|gb|EDU57471.1| hypothetical protein PROSTU_04716 [Providencia stuartii ATCC 25827]
Length = 244
Score = 41.7 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
G+ + + S + + + +G G++Y +N D + SYRY+
Sbjct: 153 GYAAVDFKTTRADAYTPGLSLHDTHTHTANNFAWSVGAGVNYALNDDWDMGLSYRYLDAG 212
Query: 210 IHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + + K A+ LG+ F
Sbjct: 213 KADITTAVGDGENTS-KIKVKANDIMLGLTYRF 244
>gi|463913|gb|AAC13753.1| heat resistant agglutinin 1 [Escherichia coli]
Length = 247
Score = 41.7 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
S ++ + LG G+ Y V DI+L SYRY+ SV+ + D
Sbjct: 168 GYGSSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRYLDAGDSSVSYKDEWGDK 227
Query: 223 ERVDRKGNAHIASLGINMHF 242
+ + +H LG+ +F
Sbjct: 228 YKSEVDVKSHDIMLGVTYNF 247
>gi|298504885|gb|ADI83608.1| porin, putative [Geobacter sulfurreducens KN400]
Length = 224
Score = 41.7 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 62/203 (30%), Gaps = 22/203 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPN-------GLGIELGHNIQLEDFVFGINC 108
G YV + +I+ + + +G G++ F
Sbjct: 28 GGYVSGFFGVSAASDADVTSIDNQFGDVFNDRVEYDPNIYVGGTGGYD--FGHFRLEGEL 85
Query: 109 HTTAAKD----DSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYGMGGFGGAYVIDSSL 161
A+ D T +R + G + A VD + + G G + + S
Sbjct: 86 SYKHAEISSITDDTGFRFRGVDGNLGALAFMANAFVDLHNNTPVTPYFGGGIGFAVLSLS 145
Query: 162 EKVESDNSKNA--KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
+ +D S D + G G++ +N +SL YRY + +
Sbjct: 146 DTYGNDTSGRLLLYPEDDTTVFAYQAGGGVEIAINPSLSLDLGYRYFGTTKGTFD----S 201
Query: 220 SDVERVDRKGNAHIASLGINMHF 242
+ K +H +G + F
Sbjct: 202 DWITTTKLKYESHNGMVGFRVKF 224
>gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
Length = 356
Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 54/191 (28%), Gaps = 25/191 (13%)
Query: 58 YVGLHISRLYETHPLAD---TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N G G +G+ Q + G
Sbjct: 29 YTGAKLGWSQYHDTGYYGNGYENNNGPTHESQLGAGAFVGY--QANPY-LGFELGYDWLG 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ F V L A S D L +Y G N
Sbjct: 86 RMPNKGTVTNGAFKAQGVQLAAKLSYPIYDDLDVYTRLG------GMVWRADATQTNPTT 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S + +G++Y + + + Y+++ N +A++ R D
Sbjct: 140 GRISDHDTGVSPLAAVGVEYALTKNWATRLDYQWVN------NIGDAQTVGTRPDN---- 189
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 190 GMLSVGVSYRF 200
>gi|213027149|ref|ZP_03341596.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 236
Score = 41.7 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+T K + + K GY + D L +Y G +S+
Sbjct: 84 YKGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYTRLG------GMVWRADTKSNVPGG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 135 ASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 357
Score = 41.7 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 58/202 (28%), Gaps = 45/202 (22%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + Y+ + + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEM----- 80
Query: 114 KDDSTFYRLKEKYFIYGDVV------------LKAGYSVDSLL-IYGMGGFGGAYVIDSS 160
Y + GDV K Y + L +Y G S+
Sbjct: 81 -----GYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGMVWRADSSA 135
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ D N G S ++ +G +Y + + Y+++ +
Sbjct: 136 FDAATGDRQNNHDT-----GVSPLVALGAEYAWTKNWATRMEYQWVSNI----------G 180
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 181 DKATVGARPDNGMLSVGVSYRF 202
>gi|253720368|gb|ACT33424.1| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 12/152 (7%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + ++++ PN LG Q + G
Sbjct: 29 YVGGKLGWSHF---ISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRMG 84
Query: 118 TFYRLKEKYFIYG-DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ K+ G + K Y +D L +Y G G + D D + +
Sbjct: 85 YTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG-GMVWRSDIHGAADGGDYTSSHDT- 142
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G S + IG++Y +N D + Y+Y+
Sbjct: 143 ----GVSPLAAIGVEYALNKDWATRLDYQYVN 170
>gi|269138621|ref|YP_003295321.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|267984281|gb|ACY84110.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|304558635|gb|ADM41299.1| Outer membrane protein A precursor [Edwardsiella tarda FL6-60]
Length = 351
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 12/152 (7%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + ++++ PN LG Q + G
Sbjct: 29 YVGGKLGWSHF---ISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRMG 84
Query: 118 TFYRLKEKYFIYG-DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ K+ G + K Y +D L +Y G G + D D + +
Sbjct: 85 YTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG-GMVWRSDIHGAADGGDYTSSHDT- 142
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G S + IG++Y +N D + Y+Y+
Sbjct: 143 ----GVSPLAAIGVEYALNKDWATRLDYQYVN 170
>gi|149185443|ref|ZP_01863759.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
gi|148830663|gb|EDL49098.1| outer membrane protein-like protein [Erythrobacter sp. SD-21]
Length = 200
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 48/167 (28%), Gaps = 5/167 (2%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG AD S GI G+++ L GI + +
Sbjct: 28 GLYVGAIGGYEGVDVESAD---GTATASADSAVYGINAGYDLSLGGAFVGIEGELSTSNG 84
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D++F G Y G + + + S + G
Sbjct: 85 DTSF-PDSFGGAREGLETGGQYYIGARAGFALTPGIAAYGKVGYTALDTTAFTSSGSLGD 143
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI-HSVNNSNAKSD 221
+ + G GL + + YR ++ V+ +A +D
Sbjct: 144 LKENADGLRYGAGLQVALPGPLEARLEYRRSKYNDLADVDQGDAMTD 190
>gi|239758178|gb|ACN65406.2| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 12/152 (7%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + ++++ PN LG Q + G
Sbjct: 29 YVGGKLGWSHF---ISNSFEDMGTTKSHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRMG 84
Query: 118 TFYRLKEKYFIYG-DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ K+ G + K Y +D L +Y G G + D D + +
Sbjct: 85 YTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG-GMVWRSDIHGAADGGDYTSSHDT- 142
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G S + IG++Y +N D + Y+Y+
Sbjct: 143 ----GVSPLAAIGVEYALNKDWATRLDYQYVN 170
>gi|255262225|ref|ZP_05341567.1| outer membrane protein [Thalassiobium sp. R2A62]
gi|255104560|gb|EET47234.1| outer membrane protein [Thalassiobium sp. R2A62]
Length = 194
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 48/182 (26%), Gaps = 11/182 (6%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
E W+G Y GL + L + + +G+ + ++ G
Sbjct: 24 EVSDWTGFYAGLQFDAVAGKTERDSL--SSFKADLEGSIVSGFVGYRWAVGRYIVGAELD 81
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D Y G + + Y ++S L +G G + + +
Sbjct: 82 IALNGDGRMIYT-------EGGLGPERPYDINSALRFGGEFGGELGGGLAYMGLGFTMLD 134
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
FD +GIG DY V I + Y + +
Sbjct: 135 VKLDSEFD--DQGYYVGIGYDYFVTDSIMVGVEINYHDFGELDGASDRVTPITLGMSAAY 192
Query: 230 NA 231
Sbjct: 193 KF 194
>gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 331
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 26/184 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + A+ I GI LG+N + ++ +T +
Sbjct: 30 YTGARLGGAHYSD-FAENIWTPDNQDQNDLAGGIFLGYNYK--PWLAVETGYTYLGEAQF 86
Query: 118 TFYRLKEKYFIYGDVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
R E+ I D+V K + + DSL ++ G + + + + +
Sbjct: 87 GNNRSVEQQGI--DLVGKFTWQATDSLDVFAKAGGFYYFA------DGKGEFNTSHDRGL 138
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
G G++Y N ++S Y+Y H ++ + VD N H +
Sbjct: 139 IP-----TTGAGVEYFFNKNVSARLEYQYY----HDIDLKD-----SGVDTSWNTHFYGV 184
Query: 237 GINM 240
+
Sbjct: 185 SLVY 188
>gi|260772262|ref|ZP_05881178.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260611401|gb|EEX36604.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 327
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 39/185 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + + L D+ +G LG+N+ +++
Sbjct: 24 YLGGKLGQTW----LNDSCRAGEVCEDRDTSMGAFLGYNL--NEWLA------------- 64
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
++ Y + G G + D + + + S + D
Sbjct: 65 ----VEAGYDMLGKFTG-IGLADDR--VKAITLAPKFTLSLSPSVGAYAKLGGAYVDYGD 117
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + GL++ V+ ++SL Y+ + +D+ + A+ SLG
Sbjct: 118 ESDYSFLAAAGLEFNVSPNVSLRTEYQVL-------------TDINNDQTRAEANTVSLG 164
Query: 238 INMHF 242
++ F
Sbjct: 165 VSYRF 169
>gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
Length = 355
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 28/192 (14%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-- 114
Y G + + I+ G G +G+ Q + G
Sbjct: 29 YTGGKLGWSQFHDVGTGSDISNDGPTHKSQLGAGAFVGY--QANQY-LGFEMGYDWLGRM 85
Query: 115 ---DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSK 170
D+ K + + K Y + L +Y G G + D+S+ ++ S
Sbjct: 86 PYKGDTVNGAFKAQGV---QLAAKLSYPIAQDLDLYTRLG-GMVWRADASV----NEPST 137
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
N+ G S + +GL+Y V + + Y+++ +I A+ D
Sbjct: 138 NSHASAHDTGVSPLAAVGLEYAVTKNWATRLDYQWVN-NIGDRGTVGARPD--------- 187
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 188 NGMLSVGVSYRF 199
>gi|312270725|gb|ADQ55763.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G ++
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY------ST 147
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 148 TREPVKSHNLNTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|331671036|ref|ZP_08371869.1| adhesin/virulence factor Hek [Escherichia coli TA271]
gi|331061625|gb|EGI33551.1| adhesin/virulence factor Hek [Escherichia coli TA271]
Length = 246
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSASY 203
G G A + + D + GR S G G+ Y V DI+L SY
Sbjct: 148 GIGYARIHQKTTGISTWDYGYGSSGRESLSRSGSADNFAWSFGAGVRYDVTPDIALDLSY 207
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY+ SV+ + D + + +H LG+ +F
Sbjct: 208 RYLDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTYNF 246
>gi|114776382|ref|ZP_01451427.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1]
gi|114553212|gb|EAU55610.1| hypothetical protein SPV1_01642 [Mariprofundus ferrooxydans PV-1]
Length = 251
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 19/184 (10%)
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG-INCHTTAAKDDSTF 119
S Y + G ++LG + +++ G + TT +
Sbjct: 85 AQASEPYVGLGVGAFNLGSGVTKKAVAGGYLQLGDD--FSEYLGGEVRIGTTGKSGEELT 142
Query: 120 YRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ + K +G LK Y D + Y + G + S S+
Sbjct: 143 LQPRMKIEYFGAAYLKPKYQFNDQWMGYALLGIAT----------LRSSYSETGLAVQKK 192
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ G+G+ Y + + S+ Y ++ + N + K++ + ++ SL
Sbjct: 193 TRTGYAYGLGVQYRLADEYSIGLEYSHMLSKPKT-NATAIKTNFQGLEASS----LSLSA 247
Query: 239 NMHF 242
HF
Sbjct: 248 KYHF 251
>gi|238757655|ref|ZP_04618839.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
gi|238704160|gb|EEP96693.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
Length = 350
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 59/192 (30%), Gaps = 32/192 (16%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + IN G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQY-QNSGSIINNDGPTHKDQLGAGAFLGY--QANQY-LGFEMGYDWLGRMP 84
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYG-MGGFGGAYVIDSSLEKVESDNSK 170
D+ K + + K Y V L +Y +GG D S+ V + N
Sbjct: 85 YKGDTNNGAFKAQGV---QLAAKLSYPVAQDLDVYTRLGGMVWRADADGSIGGVRNSNHD 141
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
G S ++ +G +Y + + Y++I N D V + +
Sbjct: 142 T--------GVSPLVALGAEYAWTKNWATRMEYQWI----------NNIGDRATVGARPD 183
Query: 231 AHIASLGINMHF 242
+ S+G++ F
Sbjct: 184 NGMLSVGVSYRF 195
>gi|209964174|ref|YP_002297089.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
gi|209957640|gb|ACI98276.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
Length = 355
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 10/193 (5%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
G YVG + D R T IE G+ + F FG T
Sbjct: 28 EGFYVGAQTGINWLQDTEFDGAIRNTATFDGAWTGVIEGGYRLGNG-FRFGAEVGYTDHT 86
Query: 115 DDSTFYRLKEKYFIYGDV-----VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D + GD+ + A Y +D+ + G VI + ++ +
Sbjct: 87 IDEIKGGAAGRAGGAGDINAWTFMATAYYDIDTGTAFRPYIGLGGGVIRAKVDGAADVFA 146
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ + + G+ Y V+ ++ L+ YR++ + + + D
Sbjct: 147 AGNRVSDSDSALAYQVAAGVAYAVSPNLDLTLGYRFLGSEDLDIRPTGG----TQFDTDY 202
Query: 230 NAHIASLGINMHF 242
+H +G+ F
Sbjct: 203 QSHSVLVGVRWTF 215
>gi|193213486|ref|YP_001999439.1| surface antigen msp4 family protein [Chlorobaculum parvum NCIB
8327]
gi|193086963|gb|ACF12239.1| surface antigen msp4 family protein [Chlorobaculum parvum NCIB
8327]
Length = 229
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 68/176 (38%), Gaps = 17/176 (9%)
Query: 55 SGNYVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFV----FGINC 108
+GNYV + + + + + + L +G+ + + D+ G
Sbjct: 25 AGNYVSANAGISWFGDAKLTDNADDEENFCVDLDSGIALTGAYGHDYGDYRIEAELGYQR 84
Query: 109 HTTAAKDDSTFYRLKEKYFIYG--DVVLKAGYSV------DSLLIYGMGGFGGAYVIDSS 160
+ A D + + ++Y + G V+ G + D L ++ G G A+V +
Sbjct: 85 NDIAKSIDYLYGSVYDEYSMTGNMSVISLMGNAYYDINLTDDLELFLTAGAGAAFVSFND 144
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ V+ D + + LG GL Y V ++ L A YRY +++++
Sbjct: 145 VGDVDDDFR---YDKVTATAFAYQLGAGLSYKVAENLRLEARYRYFATADFTIDDT 197
>gi|3282021|emb|CAA07454.1| outer membrane protein [Haemophilus sp.]
Length = 360
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 69/201 (34%), Gaps = 35/201 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + + + NS + + LG++ + F +G+ D
Sbjct: 28 FYAGVKAGQA-------SFHDGISKNSFIADILGLD-NYGYNRNSFTYGVFGGYQILNRD 79
Query: 117 STFYRLKEKYFIYGDVVLK---------------------AGYSVDSLL-IYGMGGFGGA 154
+ ++ Y +G V K Y V + L +YG G
Sbjct: 80 NLGLAVELGYDDFGRVKFKEPSPGKTSIKHTNHGAHLSFKGSYEVLNGLDVYGKAGVA-- 137
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHS 212
++ S + +++ ++ +S + +G +Y V ++++ Y+++ + +
Sbjct: 138 -LVRSDYKFYDANGARKRANSRHSLRTSGLFAVGAEYAVLPELAVRLEYQWLTRVGKLRT 196
Query: 213 VNNSNAKSDVERVDRKGNAHI 233
N+ D NA +
Sbjct: 197 QETHNSSVDYNPWIGSINAGV 217
>gi|145688456|gb|ABP88969.1| outer membrane protein A [Edwardsiella tarda]
Length = 351
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 12/152 (7%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + ++++ PN LG Q + G
Sbjct: 29 YVGGKLGWSHF---ISNSFEDMGTTKPHPNQLGAGAFFGYQANPY-LGFEMGYDWLGRMG 84
Query: 118 TFYRLKEKYFIYG-DVVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ K+ G + K Y +D L +Y G G + D D + +
Sbjct: 85 YTGDVNAKFKSQGVQLAAKLSYPLMDDLDVYTRLG-GMVWRSDIHGAADGGDYTSSHDT- 142
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G S + IG++Y +N D + Y+Y+
Sbjct: 143 ----GVSPLAAIGVEYALNKDWATRLDYQYVN 170
>gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541]
gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541]
Length = 353
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 25/189 (13%)
Query: 58 YVGLHISRLYETHP-LADTIN---RKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + H D + G G+ G+ Q ++ G
Sbjct: 29 YTGGKLGWSHYEHAKFTDEAGDTVGTGKKTRDQLGAGLYAGY--QYNQYM-GFEMGYDW- 84
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
F ++K K G V G S+ + L Y + Y + ++ N
Sbjct: 85 -----FGKMKYKGTNPGSVSS-MGVSLTTKLSYPIMEDLDVYTRLGGMVY-RTEAKVNNS 137
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ G S V +G++Y + +++ Y+++ + D + + + +
Sbjct: 138 GKETDTGVSPVYALGVEYAITPELATRLDYQWV----------SGMGDKDNIGVSPDNGM 187
Query: 234 ASLGINMHF 242
S+G+ F
Sbjct: 188 LSVGLAYRF 196
>gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3]
gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3]
Length = 318
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 22/186 (11%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
YVG +S + + + G G+ Q + + K D
Sbjct: 23 AYVGAKLSVNHYQNACQSWAIDCDATDIAG---GFYAGY--QFNKYFALEAAYLNLGKVD 77
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ + + + G + G + +L +Y + A+ S+
Sbjct: 78 AIYPINEAEKNFTGSMQ---GIEISALALYPLSNDFNAFAKAGVFNWQAK--SEGGPLTQ 132
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASL 236
+G S +G+GL Y ++ Y+Y + +++ NAH++SL
Sbjct: 133 KDYGLSPTIGLGLSYQISKQWQARLEYQYF--------ANIGSAEIGG----ANAHLSSL 180
Query: 237 GINMHF 242
GI+ F
Sbjct: 181 GISYQF 186
>gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 368
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 15/162 (9%)
Query: 63 ISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
+ L T DT+ + N LG E G++ + + ++
Sbjct: 52 LGALQNTSTSKDTLGLGAFAGYQLNPNLGFEFGYDW-FGKYTSSGELSGVRVEGEAKSQM 110
Query: 122 LKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
++ +K G+ V+ L +YG G G A+ + +D K+ + HG
Sbjct: 111 IQT--------TMKIGFPVNDALDLYGRIGGGYAWTNSELSAQTATDFIKDTGNK---HG 159
Query: 181 SSVVLGIGLDYMVNYDISLSASYRY-IPHHIHSVNNSNAKSD 221
+ V +G +Y ++ D + Y+Y P S++ S + D
Sbjct: 160 AVFVGALGAEYAIDRDWAARLEYQYTTPLGDTSLDRSGIEMD 201
>gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99]
gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 25/191 (13%)
Query: 58 YVGLHISRLYETHPLAD---TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N G G LG+ Q ++ G
Sbjct: 29 YTGGKLGWSQYHDTGYYGNGYQNNNGPTHESQLGAGAFLGY--QANQYL-GFELGYDWLG 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN-AK 173
R+ K + G + + L Y + Y + N
Sbjct: 86 ------RMPNKGSVTNGAFKAQGVQLAAKLSYPIADDLDVYTRLGGMVWRADSTQTNPTY 139
Query: 174 GRFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
GR H + V + +G++Y + + + Y+++ N +A + R D
Sbjct: 140 GRISNHDTGVSPLAAVGVEYALTKNWATRLDYQWVN------NIGDAGTVGTRPDNS--- 190
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 191 -MLSVGVSYRF 200
>gi|322832273|ref|YP_004212300.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321167474|gb|ADW73173.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 358
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 23/191 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYHDTGFANAYNGIGNGPTHESQLGAGAFLGY--QANQY-LGFEMGYDWLG 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ F V L A S D L +Y G G + D+ K +N N
Sbjct: 86 RMPYKGSVNNGAFKAQGVQLAAKLSYPLTDDLDLYTRLG-GMVWRADA---KGNFNNGAN 141
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
+ G S + +G++Y V + + Y+++ N +A + R D
Sbjct: 142 GRVSDHDTGVSPLAAVGVEYAVTKNWATRLDYQWVN------NIGDAATVGARPDNA--- 192
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 193 -MLSVGVSYRF 202
>gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
Length = 357
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 29/193 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNG--------LGIELGHNIQLEDFVFGINCH 109
Y G + + H + + + G G+ G+ Q ++ G
Sbjct: 29 YTGGKLGWSHYEHAKFTFEDAAGDETSVGTGKKTRDQLGAGLYAGY--QYNQYM-GFEMG 85
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
F ++K K G V G S+ + L Y + Y + ++
Sbjct: 86 YDW------FGKMKYKGDNAGSVSS-MGVSLTTKLSYPVMEDLDVYTRLGGMVY-RTEAK 137
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
N G+ G S V +GL+Y + +++ Y+++ D + +
Sbjct: 138 VNGVGKETDTGVSPVYALGLEYAITPELATRLDYQWVSR----------MGDKDNIGVSP 187
Query: 230 NAHIASLGINMHF 242
+ + S+G+ F
Sbjct: 188 DNGMLSVGLAYRF 200
>gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 332
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 39/185 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + L D N L G LG+N D++
Sbjct: 24 YVGAKVGKTW----LDDACNNTESCDLDGTTAGALLGYN--FNDWLA------------- 64
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
L+ Y G AG D++ Y +Y + + + + D
Sbjct: 65 ----LEGGYDYLGKFNG-AGLDRDTIQAY-TLAPKLSYALTEQWDLYGKVGAARVRYG-D 117
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G++Y ++ + Y+Y+ + V + AH +LG
Sbjct: 118 ASDYSYLGAAGVEYAATRNLGVRVEYQYLSDMNNDV-------------VRAKAHTTTLG 164
Query: 238 INMHF 242
+ F
Sbjct: 165 LVYRF 169
>gi|315122523|ref|YP_004063012.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495925|gb|ADR52524.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 229
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 72/211 (34%), Gaps = 33/211 (15%)
Query: 28 LYLPRKIDLFNEADNNVEYQDDEYG------IWSGNYVGLHISRL--YETHPLADTINRK 79
L+L A+N+ EY W G+Y+ + ++ + +R
Sbjct: 23 LFLGFFSSSAMAANNSYEYYPPALNYQSSIPKWKGSYISVDMANAALVGKDSVGIIRDRS 82
Query: 80 TYNSLLPNGLGIELGHNIQLEDFVFG--INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG 137
+ +L G + Q V+G I + ++L++G
Sbjct: 83 VHAALNKFTFG----FDSQEGTLVYGASIGYENHFTNGQIVNAAFQNSAI---SLMLRSG 135
Query: 138 YSVDS--------LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
++ D+ +IYG G L V S S + D V +G+
Sbjct: 136 FTFDNANSSLFQNTVIYGAVGV--------RLRDVSSLKSVADVLKLDLTKLDQVYAVGI 187
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + +S+ A YR + ++ SNAK+
Sbjct: 188 EKKLASMLSMHAEYRIVDSINSAMTLSNAKT 218
>gi|239950055|gb|ACS36759.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 242
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 22 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 81
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 82 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 135
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 136 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 195
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 196 DSHSVTAGISYRF 208
>gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 332
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 39/185 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + + L D N L G LG+N D++
Sbjct: 24 YVGAKVGKTW----LDDACNNTESCDLDGTTAGALLGYN--FNDWLA------------- 64
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
L+ Y G AG D++ Y +Y + + + + D
Sbjct: 65 ----LEGGYDYLGKFNG-AGLDRDTIQAY-TLAPKLSYALTEQWDLYGKVGAARVRYG-D 117
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
S + G++Y ++ + Y+Y+ + V + AH +LG
Sbjct: 118 ASDYSYLGAAGVEYAATRNLGVRVEYQYLSDMNNDV-------------VRAKAHTTTLG 164
Query: 238 INMHF 242
+ F
Sbjct: 165 LVYRF 169
>gi|241761570|ref|ZP_04759657.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373878|gb|EER63411.1| hypothetical protein ZmobDRAFT_0734 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 204
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 17/149 (11%)
Query: 78 RKTYNSLLPNGLGIELGHNIQLED-FVFGINC------------HTTAAKDDSTFYRLKE 124
R G G G + Q+ FV G + + +
Sbjct: 45 RANGVGQNNMGYGGTAGIDGQIGKYFVVGAEGTYWNPSKMWGDNNGNNMATNGNGGSVST 104
Query: 125 KYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
K F D ++ G+ +L+Y +GG+ + R G
Sbjct: 105 KAFQEWDASIRMGFLAQPDILLYAVGGYA---TTRERTLYTGVGGTGVGGYRNVGWSDGY 161
Query: 184 VLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+G G++Y ++ ++A YRY H+
Sbjct: 162 SVGGGVEYSISKMFFMNAQYRYSQFSNHT 190
>gi|71066683|ref|YP_265410.1| OmpA family protein [Psychrobacter arcticus 273-4]
gi|71039668|gb|AAZ19976.1| possible OmpA family protein [Psychrobacter arcticus 273-4]
Length = 213
Score = 40.9 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFY--RLKEKYFIYGDVVLKAGYSVDSL 143
P G+ G+N FG+ + D + Y YG Y+ +
Sbjct: 89 PTAYGVYAGYNFDPN---FGMEAEFVGSDDADYRGGDINAKSYGAYGTYR----YAFPNT 141
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+Y G G A VE N+ +S+ G+GL Y VN + S+ A Y
Sbjct: 142 GLYAKGKLGVAKTE------VERANTTANAFNGTDKDTSLAGGLGLGYSVNPNFSVEAEY 195
Query: 204 R 204
Sbjct: 196 D 196
>gi|312965808|ref|ZP_07780034.1| ompA-like transmembrane domain protein [Escherichia coli 2362-75]
gi|331669716|ref|ZP_08370562.1| adhesin/virulence factor Hek [Escherichia coli TA271]
gi|312289051|gb|EFR16945.1| ompA-like transmembrane domain protein [Escherichia coli 2362-75]
gi|331063384|gb|EGI35297.1| adhesin/virulence factor Hek [Escherichia coli TA271]
Length = 248
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRY 205
G+ + + + + + + GS+ LG G+ Y V DI+L SYRY
Sbjct: 152 GYARIHQKTTGISSWDYGYGYSGRESLSRSGSADNFAWSLGAGVRYDVTPDIALDLSYRY 211
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ SV+ + D + + +H LG+ +F
Sbjct: 212 LDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 248
>gi|148555915|ref|YP_001263497.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1]
gi|148501105|gb|ABQ69359.1| hypothetical protein Swit_3008 [Sphingomonas wittichii RW1]
Length = 172
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 30/168 (17%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGI--ELGHNIQLE-DFVFGINCH 109
++G YVG L + + +G+G G+N+ + G+ +
Sbjct: 22 DFAGPYVGG-------GVTLDNVQGSGALEGVGFSGVGATAFAGYNLPVGASTFAGVEAN 74
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDN 168
D+ K + V + GY + DS +Y G+ +
Sbjct: 75 IDLNTADAGGIEAKWGWG----VGARFGYKLNDSTALYARAGYARGKIEVLGS------- 123
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
G G V G GL+ V +SL A + + +NN
Sbjct: 124 --------SGWGDGVRYGAGLETRVTDSVSLRAEFTQTNYESDIINNQ 163
>gi|261868250|ref|YP_003256172.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413582|gb|ACX82953.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 356
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 18/187 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFY 120
H Y+ + + NS GI G+ I V G ++T
Sbjct: 44 HGLNQYQYEQDGTVVGKAKKNS---ESYGIFAGYQITDNFAVEAGYEFFGRGKVKEATGE 100
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ + + LKA Y V L +Y G V E+ +F
Sbjct: 101 KRITAHG--SSLSLKASYPVLHNLDLYARAGAALIRVDYKDNTFGETH-------KFHDL 151
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S V GL+Y + +++L Y+++ + +++ V + +
Sbjct: 152 KVSPVFAGGLEYAILPELALRLEYQWVSRVGNFGKAERKANYYENNESDVRYSPDIGSVA 211
Query: 236 LGINMHF 242
LG++ F
Sbjct: 212 LGLSYRF 218
>gi|33151319|ref|NP_872672.1| major outer membrane protein homolog, OmpA2 [Haemophilus ducreyi
35000HP]
gi|1872471|gb|AAB49274.1| OmpA2 [Haemophilus ducreyi]
gi|33147539|gb|AAP95061.1| major outer membrane protein-like protein, OmpA2 [Haemophilus
ducreyi 35000HP]
Length = 407
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 146 YGMGGFGGAYVIDSSLEK--VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
Y G G A S K ++ ++ K R S++LG G +Y + +++L Y
Sbjct: 156 YAKVGIGLARNDYSVKPKKKAVNNKTEKVKNRVYDVKPSLILGAGFEYAIIPELALRVEY 215
Query: 204 RYIPHHIH---SVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y+ + ++ + +D+ + H S G++ F
Sbjct: 216 QYLNRVGNLGKAIKKAYKTNDMVG-KYSPDMHSVSAGLSYRF 256
>gi|114778405|ref|ZP_01453252.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
gi|114551368|gb|EAU53925.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
Length = 360
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 62/194 (31%), Gaps = 20/194 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL---GIELGHNIQLE---DFVFGINC 108
SG Y+G ++ + + NR + L + ++G+ + + +
Sbjct: 11 SGFYLGGNVGQSVSHLDESGMTNRVSGPGLAITSVTRDNRDIGYKLYGGYQANKYLSLES 70
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL---------IYGMGGFGGAYVIDS 159
+ + G++ ++ G ++D+L+ ++G GG A DS
Sbjct: 71 GWFDLGRFNFTSTTTPAGSLLGNIKVR-GVNLDALIRLPLTDQFSVFGRGGLTYAQTRDS 129
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
NA + G+GLDY + + A + I+ S
Sbjct: 130 FSTTGALALPANASPKKWAWNPKY--GVGLDYNLTRAFGIRAEAE--RYRINDATGSKGN 185
Query: 220 SDVERVDRKGNAHI 233
D+ +
Sbjct: 186 IDLFSLGMTYRFGT 199
>gi|300923993|ref|ZP_07139995.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
gi|300419772|gb|EFK03083.1| OmpA-like transmembrane domain protein [Escherichia coli MS 182-1]
Length = 248
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS------VVLGIGLDYMVNYDISLSASY 203
G G A + + D GR S LG G+ Y V DI+L SY
Sbjct: 150 GIGYARIHQKTTGISTWDYGYGYSGRESLSRSGSADNFAWSLGAGIRYDVTPDIALDLSY 209
Query: 204 RYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
RY+ SV+ + D + + +H LG+ +F
Sbjct: 210 RYLDAGDSSVSYKDEWGDKYKSEVDVKSHDILLGVTYNF 248
>gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 356
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 18/187 (9%)
Query: 62 HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTTAAKDDSTFY 120
H Y+ + + NS GI G+ I V G ++T
Sbjct: 44 HGLNQYQYEQDGTVVGKAKKNS---EAYGIFAGYQITDNFAVEAGYEFFGRGKVKEATGE 100
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGH 179
+ + + LKA Y V L +Y G V E+ +F
Sbjct: 101 KRITAHG--SSLSLKASYPVLHNLDLYARAGAALIRVDYKDNTFGETH-------KFHDL 151
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
S V GL+Y + +++L Y+++ + +++ V + +
Sbjct: 152 KVSPVFAGGLEYAILPELALRLEYQWVSRVGNFGKAERKANYYENNESDVRYSPDIGSVA 211
Query: 236 LGINMHF 242
LG++ F
Sbjct: 212 LGLSYRF 218
>gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
Length = 357
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 26/192 (13%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN----GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + ++R+ + G G G+ Q ++ G
Sbjct: 29 YTGAKLGWSHYEDTSFTPVDRENTVGKSTDRDTFGAGAYAGY--QYNQYM-GFELGYDW- 84
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS---LEKVESDNSK 170
F ++K K + G S+ + L Y + Y V++ +
Sbjct: 85 -----FGKMKYKGAGNNGDLKSMGVSLTTKLSYPVMDDLDVYTRLGGMVWRTDVKAHQTG 139
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ + + G S V +G++Y + + + Y+++ +I +N + D
Sbjct: 140 EDRYKENDTGVSPVYALGVEYAITPNWATRLDYQWVS-NIGDNDNLGVRPD--------- 189
Query: 231 AHIASLGINMHF 242
+ S+G+ F
Sbjct: 190 NGMLSVGLAYRF 201
>gi|315634557|ref|ZP_07889842.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
gi|315476784|gb|EFU67531.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
Length = 354
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 7/187 (3%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G H L + S G+ G+ I ++
Sbjct: 37 FYAGAKAGWASVHHGLNQFKDEPGQTVSRNSEAYGVFGGYQI-TDNLAVEAGYEYFGRAK 95
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T ++ +G + G S L + G GA +I S + + + + +
Sbjct: 96 AKTNGEQHFRHTAHGTTLALKG-SYPVLADLDVYGRVGAALIRSDYKFTDGSDVE----K 150
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
+ S V G++Y + +++L A Y+++ + V + +
Sbjct: 151 YHNLKVSPVFAAGVEYAILPELALRAEYQWVSRVGNLGKAERKAGVDSDVRYSPDIGSVA 210
Query: 236 LGINMHF 242
LG++ F
Sbjct: 211 LGLSYRF 217
>gi|56696999|ref|YP_167361.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
gi|56678736|gb|AAV95402.1| outer membrane protein, putative [Ruegeria pomeroyi DSS-3]
Length = 178
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 52/169 (30%), Gaps = 30/169 (17%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCH 109
G WSG Y+GL + + G +G+N L + FV G
Sbjct: 26 AGDWSGAYLGLGVGYG--------DADGPGARDGEAASFGGHIGYNFDLGNRFVMGGELE 77
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+D G + +KAGY +L YG+ G A
Sbjct: 78 YDRVNNDLGAG--GGTLDEIGRLKVKAGYDFGPVLGYGVLGAARA--------------- 120
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
G+ + +V G+GL V +S+S ++
Sbjct: 121 ----TSTFGNENGLVYGLGLAMPVTDYLSVSGEVLRHQFKDFGGAGNDF 165
>gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
Length = 358
Score = 40.9 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 55/195 (28%), Gaps = 31/195 (15%)
Query: 58 YVGLHISRLYETHP----LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYQDTGTGGIYGDVGNDGPTHKNQLGAGAFLGY--QANQY-LGFEMGYDWL 85
Query: 114 K-----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
D K + + K Y V L +Y G S+ +
Sbjct: 86 GRMPYKGDVNNGAFKAQGV---QLAAKLSYPVAQDLDLYTRLGGMVWRADSSAYDAPTDT 142
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
S N G S ++ +G +Y + + Y+++ + D V
Sbjct: 143 RSSNHDT-----GVSPLVALGAEYAWTKNWATRMEYQWVSNI----------GDRATVGA 187
Query: 228 KGNAHIASLGINMHF 242
+ + + SLG++ F
Sbjct: 188 RPDNGMLSLGVSYRF 202
>gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 376
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 60/196 (30%), Gaps = 21/196 (10%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLP---------NGLGIELGHNIQLEDF 102
G SG Y G + R T A + + G I G+ I
Sbjct: 27 GQDSGWYGGANAGRSAATIDDARINSGLIGSGFSSSTIVDDDRSTGYKIFGGYQINNNFA 86
Query: 103 VFGINCHTTAAKDDSTF---YRLKEKYFIYG---DVVLKAGYSVDSLLIYGMGGFGGAYV 156
V G +T L + + G D+V S + ++G G A
Sbjct: 87 VEGGYFDLGNFGYTATTVPAGTLDGRIKLRGLNLDLVGTLPLS-EKFSVFGRAGLNYAQA 145
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
DS + + A + ++ LG+GL Y + +++ A + ++ +
Sbjct: 146 RDS---FSGTGAVQVANPNPRKNDTNYKLGLGLQYALTESLAVRAEAE--RYRVNDAIGN 200
Query: 217 NAKSDVERVDRKGNAH 232
D+ V
Sbjct: 201 RGHVDLVSVGLIYRFG 216
>gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z]
gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein
[Actinobacillus succinogenes 130Z]
Length = 356
Score = 40.9 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 61/191 (31%), Gaps = 9/191 (4%)
Query: 57 NYVGLHISRL---YETHPLADTINRKTYNSLLPNGLGIELGHNI-QLEDFVFGINCHTTA 112
Y G + + +AD + G+ G+ I +F
Sbjct: 28 FYAGARVGWSAMHHGVDRIADQFVTDGGLNRNSVTYGVFGGYQILNQNNFGLAAELGYDF 87
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + L +YG G + ++ K E+ ++
Sbjct: 88 FGKTKADAAGYHAAHGASLALKPSYEIYPDLDVYGKVGVA----LVRNMYKAETLSASGD 143
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNAKSDVERVDRKGNA 231
+F+ +S++LG G++Y + +++ Y+++ +A + +
Sbjct: 144 AEKFNKTKASLILGAGVEYAILPELAARLEYQWLSKAGNLDSALEDAGYNGTNARYSPDI 203
Query: 232 HIASLGINMHF 242
H + G++ F
Sbjct: 204 HSVTAGLSYRF 214
>gi|239950069|gb|ACS36764.1| outer membrane protein P5 [Ornithobacterium rhinotracheale]
Length = 301
Score = 40.6 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 13 WATFHNDINQLNSKYKNDARYATSANGYVINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 72
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 73 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 126
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 127 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEAKENRRATYNYSP 186
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 187 DSHSVTAGISYRF 199
>gi|284008859|emb|CBA75661.1| outer membrane adhesin [Arsenophonus nasoniae]
Length = 245
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 23/179 (12%)
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG--------------D 131
G GI LG+N + F + + I G
Sbjct: 68 AFGGGIALGYNFK-PMFQLPVRVELDFTARSNLKKNGSNGAEIAGQPLDIEMKDKIQINT 126
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE-KVESDNSKNAKGRFDGHGS----SVVLG 186
+++ A Y ++ + G V ++ + +D G + +G
Sbjct: 127 LMVNAMYDFENSSQFTPYVLAGMGVAQNNRTTDISADYQNKNAKLLSGKKVNYNFAWSIG 186
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSN--AKSDVER-VDRKGNAHIASLGINMHF 242
G+ Y +N +++L SYRYI N +++ ++ + ++H LG+ F
Sbjct: 187 AGVKYDINSNLALDLSYRYINAGKAKTNGETNLGPINIKGNLESRLHSHDIMLGMTYLF 245
>gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661]
gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661]
Length = 357
Score = 40.6 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 24/191 (12%)
Query: 58 YVGLHISRLYETHPLAD---TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N G G G+ Q + G
Sbjct: 29 YTGAKLGWSQYHDTGYYGNGYANNDGPTHESQLGAGAFGGY--QANQY-LGFELGYDWLG 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ F V L A S D L +Y G + + + +
Sbjct: 86 RMPNKGNVTNGAFKAQGVQLAAKLSYPITDDLDVYTRLGGMVWRADSTQQNTITGNRQSD 145
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S + +G++Y + + + Y+++ N +A++ V + +
Sbjct: 146 HDT-----GVSPLAAVGVEYALTQNWATRLDYQWVN------NIGDAQT----VGARPDN 190
Query: 232 HIASLGINMHF 242
+ +LG++ F
Sbjct: 191 GMLALGVSYRF 201
>gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 362
Score = 40.6 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 58 YVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK- 114
Y G + D +N G G G+ Q+ +V G
Sbjct: 40 YAGGKLGWSQFHDTGWYNDDLNNNGPTHNSQLGAGAFGGY--QVNPYV-GFEMGYDWLGR 96
Query: 115 ----DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D K + + K GY + D L IY G G + DSS ++
Sbjct: 97 MPYKGDKVNGAFKAQGV---QLTAKLGYPITDDLDIYTRLG-GMIWRADSSNSIAGDNHD 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S ++ G+++ + DI+ Y+++ N +A + V +
Sbjct: 153 T---------GVSPLVAGGVEWAITRDIATRLEYQWVN------NIGDAGT----VGVRP 193
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 194 DNGMLSLGVSYRF 206
>gi|312270731|gb|ADQ55766.1| OmpA [Haemophilus parasuis]
gi|312270733|gb|ADQ55767.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 40.6 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATGRTDLGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G S +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY----SQTA 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ +S+VLG G++Y + +++ Y+++ + + ++ +
Sbjct: 150 GVQTQKAHNLKTSLVLGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 209
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 210 DSHSVTAGISYRF 222
>gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 355
Score = 40.6 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 20/176 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + D++N + G+ G+N + + D
Sbjct: 28 YVGAKVGMGWLDSACVDSVNCED----DSVAGGLYGGYNFTDN---IALELNADYLGDYD 80
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T + Y D ++ S + V D
Sbjct: 81 TSFNYNGTTQRYSDSIIAISLS------------PMYRLAIKQEFDVFFKAGPAYIMHDD 128
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ LGIG + D ++ Y+Y + N S++ V N
Sbjct: 129 EDDVVLALGIGAEKQFADDWAVRLEYQYFDDFDDKI-IQNLNSNLVTVGLSYNFGT 183
>gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 325
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 39/189 (20%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC---HTTAAK 114
YVG + T+ + + G G+ G+ Q+ + F + H AK
Sbjct: 28 YVGARAGASFLTNMDDAVTSVTEIQNTNFAG-GVFAGY--QVTPW-FALETGYTHLGNAK 83
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D+ + + D+V K +S DSL IY G + + +
Sbjct: 84 LDNGQGSYEAQG---ADLVTKFSFSATDSLDIYAKAGAFYY----------DWNAIGSGV 130
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
D +G S G GL+Y +N ++S Y+Y + H
Sbjct: 131 TNSD-NGWSPTAGAGLEYFINKNLSTRLEYQYYNDVGGP-----------------DIHF 172
Query: 234 ASLGINMHF 242
A LG+ H+
Sbjct: 173 AGLGLAYHW 181
>gi|170767786|ref|ZP_02902239.1| flagellar protein [Escherichia albertii TW07627]
gi|170123274|gb|EDS92205.1| flagellar protein [Escherichia albertii TW07627]
Length = 855
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLEDFVF-----GIN 107
+V ++S + + L ++ TY + G G++LG++ ++ D + I+
Sbjct: 676 IFVDGNLSYSHFNNDLNANMSDGTYVDGSTNSDAWGFGVKLGYDWKVGDAGYVTPYGSIS 735
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ D + +K Y + + G Y Y + + +
Sbjct: 736 GLFQSGDDYNLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 795
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 796 DADVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 846
>gi|77461250|ref|YP_350757.1| OmpW [Pseudomonas fluorescens Pf0-1]
gi|77385253|gb|ABA76766.1| outer membrane protein W [Pseudomonas fluorescens Pf0-1]
Length = 232
Score = 40.2 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRF---DGHGSSVVLGIGLDYMVNYDISLSAS 202
Y GG ++ D E V S+ N F + G + +G DYM+ +I L+A
Sbjct: 136 YIGGGINYTWIYD---EHVGSEAQSNGFSNFKAKNSWGLAWQVGA--DYMLTDNIMLNAQ 190
Query: 203 YRYIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
RYI + NN+ A RV+ + I +G+ F
Sbjct: 191 VRYIDIDTRATVENNAVAPGTRARVNVDVDPFIYMVGLGYKF 232
>gi|269104129|ref|ZP_06156825.1| transporter [Photobacterium damselae subsp. damselae CIP 102761]
gi|268160769|gb|EEZ39266.1| transporter [Photobacterium damselae subsp. damselae CIP 102761]
Length = 201
Score = 40.2 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 20/192 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G Y+G++I +N+ + L GI+ G+ Q + +G+
Sbjct: 26 AGPYIGVNIGSG-GMDTPDLEVNQTSSYELRGLAGGIDAGYLWQTQQVEYGVELGFDTYA 84
Query: 115 DDSTFYRLKEKYFIYG---DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSK 170
+ + G D++ A Y+ S ++G G +K+ D
Sbjct: 85 KNKYRIGDFFRMDYKGYNLDLLGVAKYNFSSQWNVFGKAGLAYVN------QKLTVDGLG 138
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ V LG G Y ++ ++A Y ++ + S+ +
Sbjct: 139 LIGKNKNEIKPKVALGFG--YDFTPELGMNAEYSHVFAGDANSLKSDGTKV-------AS 189
Query: 231 AHIASLGINMHF 242
+ +LG+ F
Sbjct: 190 VDMLTLGVQYRF 201
>gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703]
gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech703]
Length = 354
Score = 40.2 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 60/187 (32%), Gaps = 22/187 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G + + +T N N G G+ G+ Q + G
Sbjct: 27 YAGGKLGWSQFHDTGLNGSGYQTTNDAQENQLGAGVFGGY--QANPY-LGFEMGYDWLG- 82
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
R+K G+ + G + + L Y + Y + +
Sbjct: 83 -----RMKYTGVNRGNFKAQ-GVQLAAKLSYPIVDDLDVYTRLGGFVWRADSHDDVSGNS 136
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G S + +G++Y + + + Y+++ N +A + V + + + S
Sbjct: 137 GHDTGVSPLAAVGVEYAITKNWATRLDYQWVN------NIGDAST----VGGRPDNGLLS 186
Query: 236 LGINMHF 242
+G++ F
Sbjct: 187 VGVSYRF 193
>gi|238785957|ref|ZP_04629921.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
gi|238713147|gb|EEQ05195.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
Length = 350
Score = 40.2 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 22/187 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + I G G LG+ Q ++ G
Sbjct: 29 YTGGKLGWSQF-QDTGSIIENDGPTHKDQVGAGAFLGY--QANQYL-GFEMGYDWLG--- 81
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
R+ K G + + L Y + Y + R
Sbjct: 82 ---RMPYKGDTNNGAFKAQGVQLAAKLSYPVAQDLDVYTRLGGMVWRADATGSINGDRTS 138
Query: 178 GHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
GH + V ++ +G +Y + + Y+++ N D V + + + S
Sbjct: 139 GHDTGVSPLVALGAEYAWTKNWATRMEYQWV----------NNIGDRATVGARPDNGMLS 188
Query: 236 LGINMHF 242
+G++ F
Sbjct: 189 VGVSYRF 195
>gi|254780598|ref|YP_003065011.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040275|gb|ACT57071.1| outer membrane protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 205
Score = 40.2 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 59/202 (29%), Gaps = 28/202 (13%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYG----IWSGNYVGLHIS 64
LF V +S + + P + + Y ++G Y GL
Sbjct: 4 LFLAVGVSSLALASFCSAQAADPVRRAHHGGRGVVPTIATNRYVPIRHDFNGPYAGL--- 60
Query: 65 RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKE 124
+ + S I G+N++ ++G+ +
Sbjct: 61 SALYNGSFGEEAHHNAGGS-------IFAGYNVEDSCIMYGVEGDVRYT-VPVLADNIHS 112
Query: 125 KYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ I G + ++ GY V DSLL+Y G V G
Sbjct: 113 LHGIGGSLRIRGGYEVSDSLLLYATVG-----------PDVAQKYETGKAGEITPIAIGG 161
Query: 184 VLGIGLDY-MVNYDISLSASYR 204
G+G++ ++ + YR
Sbjct: 162 TAGVGVEVGGLSESLVARLEYR 183
>gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 359
Score = 40.2 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 34/193 (17%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAK- 114
Y G + + ++ N + G G G+ Q+ +V G
Sbjct: 37 YAGGKLGWSQFHDTGWYNSANNNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGR 93
Query: 115 ----DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ T K + + K GY V D L +Y G G + DSS D+
Sbjct: 94 MPYKGNETNGAFKAQGV---QLTAKLGYPVTDDLDVYTRLG-GMVWRADSSNSNAGDDHD 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ + DI+ Y+++ N + + V +
Sbjct: 150 T---------GVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDGAT----VGVRP 190
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 191 DNGMLSVGVSYRF 203
>gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 455
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 60 GLHISRLY-ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
G+ Y T + K + P G GI G+N G + + T
Sbjct: 26 GVEPGAFYLSPIVGGYTFDGKQHLETQPVG-GIRAGYNFTKH---LGAEALFDYTRTEGT 81
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
K ++ YG L + + L+ Y G+ G + +D +K +G FD
Sbjct: 82 RSSTKTDFYRYGADALLHIFPDNRLVPYIAAGYSGMSLD-------SNDGTKLTRGVFDY 134
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
G G+ Y ++ +L +R++ + SN + ++
Sbjct: 135 -------GPGIKYFISDTWALRGDFRHLIFKHEGDSYSNYEYNL 171
>gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
Length = 368
Score = 39.8 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 29/189 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W G +G ++ A YN LG ELG++ L + + + A
Sbjct: 52 WDGVNIGN--GSTHKDQIGAGAFAGYQYNQY----LGFELGYDW-LGRMAYKGSYNNGAF 104
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K K Y + +D L +Y G G + DS+ + +
Sbjct: 105 KAQGIQLTTKLSYPV-----------MDDLDVYTRLG-GMVWRADSTATINATSAGTQKR 152
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G S V +G +Y + +I+ Y++I +I NA+ D +
Sbjct: 153 FSENDTGVSPVFALGTEYAITPNIATRLEYQWIN-NIGDKGTLNARPD---------NGM 202
Query: 234 ASLGINMHF 242
S+G+ F
Sbjct: 203 LSVGVAYRF 211
>gi|288225947|gb|ADC44458.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 58 YVGLHISRLYETHPLAD---TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + + + G G LG+ Q + G
Sbjct: 1 YTGAKLGWSQYHDKGYYGNSYQDNDGPSHESQLGAGAFLGY--QANPY-LGFELGYDWLG 57
Query: 115 -DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ Y++ + G + K Y V D L +Y G G + +DS+ + V D +
Sbjct: 58 RMPNKGYQVNGAFKAQGVQLAAKLSYPVMDDLDVYTRLG-GIVWRVDSTQQVVGGDRISD 116
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S + +G++Y V + + Y+++ N +A + R D
Sbjct: 117 HDT-----GVSPLAAVGVEYAVTKNWATRLDYQWVN------NIGDAGTVGARSDNS--- 162
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 163 -MLSVGVSYRF 172
>gi|7188820|gb|AAF37888.1|AF234270_1 outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 249
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I+ G G G+ Q+ +V G
Sbjct: 29 YAGAKLG--WSQYHDTGFIHNDGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L +Y G G + D+ ++K+
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKD 139
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 140 HDT-----GVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GLLSVGVSYRF 195
>gi|154252136|ref|YP_001412960.1| OmpA domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154156086|gb|ABS63303.1| OmpA domain protein transmembrane region-containing protein
[Parvibaculum lavamentivorans DS-1]
Length = 184
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 39/166 (23%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF--VFGINCHTTAA 113
G YVG + + T +L + V G T
Sbjct: 51 GLYVGGGLGWGWSDDDDDWTWKGIAG---------------WRLNQYLAVQGFYADLT-- 93
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
D T + +G +L + D++ IYG GG + ++V S
Sbjct: 94 --DITVAGVSSDVDTFGAELLASFPVSDTMAIYGKGGLH-------NYDEVGS------- 137
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
G +S + G G+D+ ++ ++SL + + V+ ++ +
Sbjct: 138 ----GRDTSWLAGAGVDFALSDNMSLRTEWTHYDLDSDDVDEASVQ 179
>gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum]
Length = 319
Score = 39.8 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 28/181 (15%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK-----DDSTFYRL 122
+ I+ G G G+ Q+ +V G D+
Sbjct: 12 PQYHDTGFIHNDGPTDENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMPYKGDNINGAY 68
Query: 123 KEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
K + + K GY + D L +Y G G + D+ ++K+ G
Sbjct: 69 KAQGV---QLTAKLGYPITDDLDVYTRLG-GMVWRADTKSNVPGGPSTKDHDT-----GV 119
Query: 182 SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
S V G++Y + +I+ Y++ + N +A + R D + S+G++
Sbjct: 120 SPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN----GLLSVGVSYR 169
Query: 242 F 242
F
Sbjct: 170 F 170
>gi|165977295|ref|YP_001652888.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190151211|ref|YP_001969736.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250896|ref|ZP_07337088.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252762|ref|ZP_07338923.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248928|ref|ZP_07530938.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307253541|ref|ZP_07535410.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307257957|ref|ZP_07539710.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307264561|ref|ZP_07546144.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165877396|gb|ABY70444.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916342|gb|ACE62594.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648412|gb|EFL78607.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650246|gb|EFL80410.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854539|gb|EFM86732.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306858989|gb|EFM91033.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306863504|gb|EFM95434.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306870090|gb|EFN01851.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 364
Score = 39.8 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 34/205 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+ + G+ A +R T + N + G+ G+ I L G+
Sbjct: 34 WASFHDGIE------QLDSAKNTDRGTKYGINRNSVTYGVFGGYQI-LNQDKLGLAAELG 86
Query: 112 A-------------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVI 157
K D +R + LK Y V L +YG G
Sbjct: 87 YDYFGRVRGSEKPNGKADKKTFRHAAHG---ATIALKPSYEVLPDLDVYGKVGIALVNNT 143
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ N+ K + SS++LG G++Y + +++ Y+++ + + + +
Sbjct: 144 YKTF------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGKA--SYS 195
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+ + D + + S G++ F
Sbjct: 196 TLNRMGATDYRSDISSVSAGLSYRF 220
>gi|329755856|gb|AEC04325.1| outer membrane protein A [Pasteurella multocida]
Length = 354
Score = 39.8 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 64/198 (32%), Gaps = 18/198 (9%)
Query: 57 NYVGLHISRLYETHPLA-----DTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCH 109
YVG L D N + G+ G+ I V
Sbjct: 28 FYVGAKAGWASFHDGLNQVKDFDKAGNAGSFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTFYRLKE---KYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKV 164
AK +T K+ +G + LKA Y V L +Y G +K
Sbjct: 88 FGRAKLRNTVGEKTNTIAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKLYDK- 146
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
E+ S R S V GL+Y +++L Y+++ + N ER
Sbjct: 147 ENTPSLQDYQRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKNAKG-----ER 201
Query: 225 VDRKGNAHIASLGINMHF 242
VD + + + G++ F
Sbjct: 202 VDYRPDIGSVTAGLSYRF 219
>gi|156739568|gb|ABU93444.1| Omp25 [Brucella melitensis]
gi|156739602|gb|ABU93461.1| Omp25 [Brucella suis]
Length = 66
Score = 39.8 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 4 KQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWT 52
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 53 AGAGLEAKLTDNI 65
>gi|32034275|ref|ZP_00134486.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209314|ref|YP_001054539.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae L20]
gi|126098106|gb|ABN74934.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 364
Score = 39.8 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 34/205 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+ + G+ A +R T + N + G+ G+ I L G+
Sbjct: 34 WASFHDGIE------QLDSAKNTDRGTKYGINRNSVTYGVFGGYQI-LNQDKLGLAAELG 86
Query: 112 A-------------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVI 157
K D +R + LK Y V L +YG G
Sbjct: 87 YDYFGRVRGSEKPNGKADKKTFRHAAHG---ATIALKPSYEVLPDLDVYGKVGIALVNNT 143
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ N+ K + SS++LG G++Y + +++ Y+++ + + + +
Sbjct: 144 YKTF------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGKA--SYS 195
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+ + D + + S G++ F
Sbjct: 196 TLNRMGATDYRSDISSVSAGLSYRF 220
>gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430]
gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430]
gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 355
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 29/193 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G LG+ Q + G
Sbjct: 29 YTGGKLG--WSQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANQY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN- 171
R+ K + G + + L Y + Y + N
Sbjct: 84 LG------RMPNKGDVTNGAFKAQGIQMAAKLSYPIADDLDVYTRLGGMVWRADATQTNP 137
Query: 172 AKGRFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
GR H + V + +G++Y V + + Y+++ N +A + R D
Sbjct: 138 TYGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWVN------NIGDAGTVGARPDNS- 190
Query: 230 NAHIASLGINMHF 242
+ S+G++ F
Sbjct: 191 ---MLSVGVSYRF 200
>gi|212212222|ref|YP_002303158.1| hypothetical protein CbuG_0602 [Coxiella burnetii CbuG_Q212]
gi|212010632|gb|ACJ18013.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
Length = 263
Score = 39.8 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 142 SLLIYGMGGFGGAYVI--DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+YG G A + + + + S + + + + + V G+G+ + ISL
Sbjct: 153 RTHMYGKLGVSYAKLNQKLTVSQWMASSLQTSVQQKLNKNLWGYVAGLGIAEDLGRGISL 212
Query: 200 SASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHIASLGINMHF 242
A Y Y + + + S+ D+ A+ +G N+ F
Sbjct: 213 FAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYTIRVGFNIEF 261
>gi|7188822|gb|AAF37889.1|AF234271_1 outer membrane protein A [Shigella flexneri]
Length = 246
Score = 39.8 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 62/191 (32%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK--- 114
Y G + + + I G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFIPNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 115 --DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
D+ K + + K GY + D L IY G +++
Sbjct: 84 YKGDNINGAYKAQGV---QLTAKLGYPITDDLDIYTRLG------GMVWRADTKANVPGG 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
A + G S V G++Y + +I+ Y++ + N +A + R D
Sbjct: 135 ASFKDHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDANTIGTRPDN---- 184
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 185 GLLSLGVSYRF 195
>gi|46581493|ref|YP_012301.1| OMPP1/FadL/TodX family outer membrane protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|46450915|gb|AAS97561.1| outer membrane protein, OMPP1/FadL/TodX family [Desulfovibrio
vulgaris str. Hildenborough]
gi|311235142|gb|ADP87996.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfovibrio vulgaris RCH1]
Length = 401
Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 56/177 (31%), Gaps = 26/177 (14%)
Query: 84 LLPNGLGIELGHNIQ-LEDFVFG----------INCHTTAAKDDSTFYRLKEKYFIYGDV 132
G G+ G Q ED G + T + + L GD+
Sbjct: 183 GDSTGFGLNGGMWWQAFEDIALGASFRTPVKQHVKGRATFDNVPAGYGPLFRDTDAEGDI 242
Query: 133 V----LKAGYSVDSL--LIYGMGGFGGAYVI--DSSLEKVESDNSKNAKGRFDGHGSSVV 184
++ G + L +G + + ++ K A +
Sbjct: 243 TLPGEVRFGVYWQATERLGVEVGAMRTFWSSYDELRIDYGSPVGGKPASIKQTEWEDVWR 302
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
L G +Y + ++ L A Y Y VN+++ V DR H+ SLG+ H
Sbjct: 303 LSAGAEYRLTDNVDLRAGYVY---DEEPVNSAHLDFMVPANDR----HLMSLGVGYH 352
>gi|86134916|ref|ZP_01053498.1| TonB dependent/ligand-gated channel [Polaribacter sp. MED152]
gi|85821779|gb|EAQ42926.1| TonB dependent/ligand-gated channel [Polaribacter sp. MED152]
Length = 867
Score = 39.8 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 27/190 (14%)
Query: 67 YETHPLADTINRKTYNSLLPNG-----LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYR 121
Y P D I + N++ P+ G+E+G+N + E F +N ++T+ +D +
Sbjct: 607 YSRQPYHDNIFNQFTNAVNPSSQNEKIFGLEMGYNYRSEKFSANVNLYSTSWRDRVDGFS 666
Query: 122 -------LKEKYFIYGDVVLKAGYSVD---------SLLIYGMGGFGGAYVIDSSLEKVE 165
+ G G VD L + G ++L E
Sbjct: 667 DVDPTTGVVTITQTTGQNQYHMGVEVDFIANITDNFRLKGFTSIGDWKYKGELTTLVFDE 726
Query: 166 SDNSKNAKGRFD------GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
N A D G + G+G DY + ++S+ A YR+ + +V+ + +
Sbjct: 727 DRNQIGAASTVDVDGINVGDAAQFTAGLGFDYSILDNLSIDADYRFYDNLFANVSPTQGQ 786
Query: 220 SDVERVDRKG 229
+ +
Sbjct: 787 LQLPSYNITD 796
>gi|238795889|ref|ZP_04639402.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
gi|238720352|gb|EEQ12155.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
Length = 350
Score = 39.8 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 22/187 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + IN G G LG+ Q ++ G
Sbjct: 29 YTGGKLGWSQF-QDTGSIINNDGPTHKDQIGAGAFLGY--QANQYL-GFEMGYDWLG--- 81
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
R+ K G + + L Y + Y + + R+
Sbjct: 82 ---RMPYKGDTNNGAFKAQGVQLAAKLSYPVAQDLDVYTRLGGMVWRADTDGSIDGQRYS 138
Query: 178 GHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
H + V ++ +G +Y + + Y+++ + D V + + + S
Sbjct: 139 AHDTGVSPLVALGAEYAWTKNWATRMEYQWVSNI----------GDKATVGARPDNGMLS 188
Query: 236 LGINMHF 242
+G++ F
Sbjct: 189 VGVSYRF 195
>gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont]
Length = 356
Score = 39.8 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 29/193 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G LG+ Q + G
Sbjct: 29 YTGAKLG--WSQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANPY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ F V L A S D L +Y G G + DS+ ++
Sbjct: 84 LGRMPNKGNVTNGAFKAQGVQLAAKLSYPIADDLDVYTRLG-GMVWRADSTQTNPDNGRI 142
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
N G S + +G++Y + + + Y+++ N +A + R D
Sbjct: 143 SNHNT-----GVSPLAAVGVEYALTKNWATRLDYQWVN------NIGDAGTVGARPDNS- 190
Query: 230 NAHIASLGINMHF 242
+ S+G++ F
Sbjct: 191 ---MLSVGVSYRF 200
>gi|110835522|ref|YP_694381.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2]
gi|110648633|emb|CAL18109.1| hypothetical protein ABO_2661 [Alcanivorax borkumensis SK2]
Length = 251
Score = 39.8 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 20/143 (13%)
Query: 90 GIELGHNIQLED-FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV-------------LK 135
G+ +N+ L D ++ G + + + + G+ +K
Sbjct: 78 GVFTSYNMALNDRWIVGAELAYQGSNTSDSVKSIPGD-PLAGNQTEAEVEINQTFLLGIK 136
Query: 136 AGYSVD-SLLIYGMGGFGGAYVIDSSL----EKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
GY ++ S L Y V +S V + S D + + L +GL+
Sbjct: 137 GGYLLNASTLAYSTLSATLTEVEVNSDCPSDGTVCNPGSPARSDSDDDNITGWALALGLE 196
Query: 191 YMVNYDISLSASYRYIPHHIHSV 213
++ ++S+ A YRY +V
Sbjct: 197 KSLSENLSVRAEYRYADLGTANV 219
>gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617]
Length = 355
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 29/193 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G LG+ Q + G
Sbjct: 29 YTGGKLG--WSQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANQY-LGFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN- 171
R+ K + G + + L Y + Y + N
Sbjct: 84 LG------RMPNKGDVTNGAFKAQGIQMAAKLSYPIADDLDVYTRLGGMVWRADATQTNP 137
Query: 172 AKGRFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
GR H + V + +G++Y V + + Y+++ N +A + R D
Sbjct: 138 TFGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWVN------NIGDAGTVGARPDNS- 190
Query: 230 NAHIASLGINMHF 242
+ S+G++ F
Sbjct: 191 ---MLSVGVSYRF 200
>gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 352
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 53/174 (30%), Gaps = 22/174 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSL------LPNGLGIELGHNIQ-----LEDFVFG 105
Y G+ ++ + + TY S G+ +G+N+ + +
Sbjct: 27 FYAGVRAGGVHYSDFDSKNYANGTYGSGAEGVDRDDFAAGVFMGYNVTPWFAIEGGYTWL 86
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ + + ++ + G +A D + +Y G + L
Sbjct: 87 GEVTSKYDEHHDSGKIEQQAIDLVGKFTYQA---TDKVDLYTKVGGAWQFTRAKGLPG-- 141
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
D + G+G +Y ++S A Y+Y + ++ K
Sbjct: 142 -----QTATDRDDSLIA-TAGLGAEYHFTDNLSARAEYQYYHNMETKPTGTDTK 189
>gi|300905951|ref|ZP_07123679.1| outer membrane insertion signal [Escherichia coli MS 84-1]
gi|301302540|ref|ZP_07208670.1| outer membrane insertion signal [Escherichia coli MS 124-1]
gi|300402232|gb|EFJ85770.1| outer membrane insertion signal [Escherichia coli MS 84-1]
gi|300842065|gb|EFK69825.1| outer membrane insertion signal [Escherichia coli MS 124-1]
gi|315255466|gb|EFU35434.1| outer membrane insertion signal [Escherichia coli MS 85-1]
Length = 248
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 59/201 (29%), Gaps = 11/201 (5%)
Query: 49 DEYGIWSGNYVGLH------ISRLYETHPLADTINRKTYNSLLPNGLG-IELGHNIQLED 101
D G W+ Y G + L + N + G G E + + +
Sbjct: 52 DGEGAWADKYKGGDKSDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGNAESKYRLSYWE 111
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
V G K L Y S L Y +Y+ +
Sbjct: 112 SVGGAEFDDAQNKLSVNTLMLNAYYDFRNSSAFTPWISAG--LGYARVHHKTSYIYTDNS 169
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
S +A + + LG+G+ Y V D SL SYRY+ ++ +
Sbjct: 170 PAGSEVYSASASKY--ENNLAWSLGVGVKYDVTQDFSLDLSYRYLDAGDSTLTYKDEDGA 227
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ ++ LG +F
Sbjct: 228 KYKSSVDVRSNEFMLGATYNF 248
>gi|29347184|ref|NP_810687.1| hypothetical protein BT_1774 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339083|gb|AAO76881.1| SusC homolog [Bacteroides thetaiotaomicron VPI-5482]
Length = 1101
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + + LY + I T + +GLG+ G+N+Q F+ + S
Sbjct: 231 GANAAALYGSDAANGVILITTRKATKKSGLGVSYGYNMQF-TFLREFPAYQNVYGSASLP 289
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-------LEKVESDNSKNA 172
F Y K GY+ D L YG+ F A S + V +N +
Sbjct: 290 AVGVGDGFNYYGSNSKNGYAYDPSLPYGIFVFNWANPNQRSWGLPMLGFDLVGRNNQIRS 349
Query: 173 K-GRFDGHGSSVVLGIGLDYMVNYD 196
DG +G+ + + V+ +
Sbjct: 350 YVPNKDGITDMYEMGVAMTHSVSVN 374
>gi|288225941|gb|ADC44455.1| OmpA [Candidatus Erwinia dacicola]
gi|288225945|gb|ADC44457.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 39.4 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 25/191 (13%)
Query: 58 YVGLHISRLYETHPLAD---TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + + + G G LG+ Q + G
Sbjct: 1 YTGAKLGWSQYHDKGYYGNSYQDNDGPSHESQLGAGAFLGY--QANPY-LGFELGYDWLG 57
Query: 115 -DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ Y++ + G + K Y V D L +Y G G + +DS+ + V D +
Sbjct: 58 RMPNKGYQVNGAFKAQGVQLAAKLSYPVMDDLDVYTRLG-GIVWRVDSTQQVVGGDRISD 116
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S + +G++Y V + + Y+++ N +A + R D
Sbjct: 117 HDT-----GVSPLAAVGVEYAVTKNWATRLDYQWVN------NIGDAGTVGARSDNS--- 162
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 163 -MLSVGVSYRF 172
>gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 355
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 27/177 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN---------GLGIELGHNIQ-----LEDF 102
Y G+ ++ + + TY+ L N G+ +G+N+ +
Sbjct: 27 FYAGVRAGGVHYSDFDSKNYANGTYDQELQNRNAIDRDDFAAGLFMGYNVTPWFAIEGGY 86
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLE 162
+ + + ++ + G +A D + +Y G + + +E
Sbjct: 87 TWLGEATLKGDEHHNLGKVEQQAIDLVGKFTYQA---TDKVDLYTKVGGAWQFTR-AKVE 142
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAK 219
V SD + G+G +Y ++S A Y+Y + ++ K
Sbjct: 143 GVGSDRDDSLIA---------TAGLGAEYHFTDNLSARAEYQYYHNMETKPTGTDTK 190
>gi|332701600|ref|ZP_08421688.1| putative outer-membrane protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551749|gb|EGJ48793.1| putative outer-membrane protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 217
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 18/197 (9%)
Query: 56 GNYVGLHISRLYETH------PLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINC 108
G Y+G + P D + + + G+ LG+ ++D F G
Sbjct: 29 GFYIGAKVGNESYQIDVEYDGPSNDFEDDADDSGFVA---GVYLGNGRAIKDVFYLGWEV 85
Query: 109 HTTAAKDDSTFYRLKEKYFIYGDVVLKA---GYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ +F E + + LKA G D L+YG+ G A +
Sbjct: 86 DAMTHNMEGSFSGGNESLDMNWSLGLKARLGGVIADRNLLYGLAGVRFASFDYRNDTGYI 145
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
D+ + LG G ++ + + A Y + V +
Sbjct: 146 LDDE-----DENPVLPGFTLGGGYEFAITDHLIARAEVTYTAYAAAKVEYLGGPRNGIEE 200
Query: 226 DRKGNAHIASLGINMHF 242
+ + ++G+ +F
Sbjct: 201 EMSPSTMDYTVGLAWNF 217
>gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 346
Score = 39.4 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 57/188 (30%), Gaps = 9/188 (4%)
Query: 57 NYVGLHISRLYETHPLADTINRK-TYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G H L + GI G+ I V + AK
Sbjct: 28 FYAGAKAGWASVHHGLGQFTDGNDGKIRRNSEAYGIFGGYQITDNLAVEAGYEYFGRAKV 87
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
+ + LK Y V D+L +YG G + +D
Sbjct: 88 KYSDGDQFRHTAHGTTLALKGSYPVLDNLDVYGRAGAALIRSDYKQVNDGVAD------- 140
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
++ S V G++Y + +++L A Y+++ + V +
Sbjct: 141 KYHNLKVSPVFAAGVEYAILPELALRAEYQWVSRVGNLGKAVRKAGYESDVRYSPDIGSV 200
Query: 235 SLGINMHF 242
++G++ F
Sbjct: 201 AVGLSYRF 208
>gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 317
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 27/155 (17%)
Query: 57 NYVGLHISRL-YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF--VFGINCHTTAA 113
Y G I Y+T ++ G LG+ Q+ + V H +
Sbjct: 21 FYAGARIGNAIYDTDHKGPNVDDANLAG------GAFLGY--QIAPWFAVEAGYTHLGST 72
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
T + + + D+V K Y++ D + ++G G V +L +
Sbjct: 73 TIKGTDAKFRTQG---ADIVGKYSYAINDKIDVFGKLGAYYYDVHTKNLADAKE------ 123
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
HG + G+G +Y + ++S + Y+Y
Sbjct: 124 ------HGWAGTAGVGAEYYLTNNLSTAVEYQYYN 152
>gi|156739550|gb|ABU93435.1| Omp25 [Brucella abortus]
gi|156739554|gb|ABU93437.1| Omp25 [Brucella abortus]
gi|156739570|gb|ABU93445.1| Omp25 [Brucella melitensis]
Length = 65
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 3 KQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWT 51
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 52 AGAGLEAKLTDNI 64
>gi|62548381|gb|AAX86828.1| outer membrane protein [Pasteurella multocida]
Length = 358
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 17/197 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+ + GL+ ++ + + T K + G+ G+ I V A
Sbjct: 36 WASFHDGLNQAKDLSSAANSGTFGFKRNSVT----YGVFGGYQITDNFAVELGYDDFGRA 91
Query: 114 KDDSTFYRLKE----KYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
K + LK K+ YG + LKA Y V L +Y G + +
Sbjct: 92 KLRHSLPELKAATVAKHTNYGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYNDAKGE 151
Query: 168 --NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
R S V GL+Y +++L Y+++ + + ERV
Sbjct: 152 PVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG-----ERV 206
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 207 DYRPDIGSVTAGLSYRF 223
>gi|29654706|ref|NP_820398.1| hypothetical protein CBU_1414 [Coxiella burnetii RSA 493]
gi|161831056|ref|YP_001597253.1| hypothetical protein COXBURSA331_A1575 [Coxiella burnetii RSA 331]
gi|29541974|gb|AAO90912.1| hypothetical exported protein [Coxiella burnetii RSA 493]
gi|161762923|gb|ABX78565.1| hypothetical protein COXBURSA331_A1575 [Coxiella burnetii RSA 331]
Length = 263
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 142 SLLIYGMGGFGGAYVI--DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+YG G A + + + + S + + + + + V G+G+ + ISL
Sbjct: 153 RTHMYGKLGVSYAKLNQKLTVSQWMASSLQTSVQQKLNKNLWGYVAGLGIAEDLGRGISL 212
Query: 200 SASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHIASLGINMHF 242
A Y Y + + + S+ D+ A+ +G N+ F
Sbjct: 213 FAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYTIRVGFNIEF 261
>gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 322
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 65/204 (31%), Gaps = 28/204 (13%)
Query: 43 NVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
N + G S Y+G + + L + G G+ G+ Q +
Sbjct: 6 NGTVASESKGEQSHVYLGGQVGVSHF---LGACSSNAIECKNYVTGGGLYGGY--QFNSW 60
Query: 103 VFGINCHTTAAKDDSTFYRLKEKYFIYG---DVVLKAGYSV-DSLLIYGMGGFGGAYVID 158
F + TFY + + Y+ D+ +K V D+L +Y GG Y+
Sbjct: 61 -FALEGSWHDYGSPKTFYGVGDGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSV 119
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
S + V G F+ S ++ + A Y P+ + S
Sbjct: 120 SGNDNV-------HLGMFESDSS-----------LDDIWEIGAEYALAPNWSLRLGTSVI 161
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
K + + SLG+ F
Sbjct: 162 DGIGNAKTGKSDLYFTSLGLTYKF 185
>gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163]
Length = 355
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 29/193 (15%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G LG+ Q ++ G
Sbjct: 29 YTGGKLG--WSQYHDTGYYGNGYENNDGPTHESQLGAGAFLGY--QANQYL-GFELGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN- 171
R+ K + G + + L Y + Y + N
Sbjct: 84 LG------RMPNKGDVTNGAFKAQGIQMAAKLSYPIADDLDVYTRLGGMVWRADATQTNP 137
Query: 172 AKGRFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
GR H + V + +G++Y V + + Y+++ N +A + R D
Sbjct: 138 TFGRISNHDTGVSPLAAVGVEYAVTKNWATRLDYQWVN------NIGDAGTVGARPDNS- 190
Query: 230 NAHIASLGINMHF 242
+ S+G++ F
Sbjct: 191 ---MLSVGVSYRF 200
>gi|312270729|gb|ADQ55765.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 70/193 (36%), Gaps = 12/193 (6%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ Y+ T + G+ G+ I V G +
Sbjct: 36 WATFHNDINQLNFKYKNDARYATGRTDLGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 95
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG G +
Sbjct: 96 VRGNKQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGKVGAALVRNDYKRY-FQTREPV 152
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
K+ + +S+++G G++Y + +++ Y+++ + + ++ +
Sbjct: 153 KSHNLK-----TSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEMKENRRATYNYSP 207
Query: 230 NAHIASLGINMHF 242
++H + GI+ F
Sbjct: 208 DSHSVTAGISYRF 220
>gi|307246787|ref|ZP_07528853.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307251124|ref|ZP_07533047.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307255770|ref|ZP_07537572.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307260222|ref|ZP_07541930.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852258|gb|EFM84497.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306856856|gb|EFM88989.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306861233|gb|EFM93225.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306865669|gb|EFM97549.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 364
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 34/205 (16%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+ + G+ A +R T + N + G+ G+ I L G+
Sbjct: 34 WASFHDGIE------QLDSAKNTDRGTKYGINRNSVTYGVFGGYQI-LNQDKLGLAAELG 86
Query: 112 A-------------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVI 157
K D +R + LK Y V L +YG G
Sbjct: 87 YDYFGRVRGSEKPNGKADKKTFRHAAHG---ATIALKPSYEVLPDLDVYGKVGIALVNNT 143
Query: 158 DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ N+ K + SS++LG G++Y + +++ Y+++ + + + +
Sbjct: 144 YKTF------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGKA--SYS 195
Query: 218 AKSDVERVDRKGNAHIASLGINMHF 242
+ + D + + S G++ F
Sbjct: 196 TLNRMGATDYRSDISSVSAGLSYRF 220
>gi|253571922|ref|ZP_04849327.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298387493|ref|ZP_06997045.1| outer membrane protein [Bacteroides sp. 1_1_14]
gi|251838519|gb|EES66605.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298259700|gb|EFI02572.1| outer membrane protein [Bacteroides sp. 1_1_14]
Length = 1085
Score = 39.4 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTF 119
G + + LY + I T + +GLG+ G+N+Q F+ + S
Sbjct: 215 GANAAALYGSDAANGVILITTRKATKKSGLGVSYGYNMQF-TFLREFPAYQNVYGSASLP 273
Query: 120 YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-------LEKVESDNSKNA 172
F Y K GY+ D L YG+ F A S + V +N +
Sbjct: 274 AVGVGDGFNYYGSNSKNGYAYDPSLPYGIFVFNWANPNQRSWGLPMLGFDLVGRNNQIRS 333
Query: 173 K-GRFDGHGSSVVLGIGLDYMVNYD 196
DG +G+ + + V+ +
Sbjct: 334 YVPNKDGITDMYEMGVAMTHSVSVN 358
>gi|154705982|ref|YP_001423991.1| hypothetical protein CBUD_0582 [Coxiella burnetii Dugway 5J108-111]
gi|154355268|gb|ABS76730.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
Length = 263
Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 142 SLLIYGMGGFGGAYVI--DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+YG G A + + + + S + + + + + V G+G+ + ISL
Sbjct: 153 RTHMYGKLGVSYAKLNQKLTVSQWMASSLQTSVQQKLNKNLWGYVAGLGIAEDLGRGISL 212
Query: 200 SASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHIASLGINMHF 242
A Y Y + + + S+ D+ A+ +G N+ F
Sbjct: 213 FAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYTIRVGFNIEF 261
>gi|288962863|ref|YP_003453157.1| outer membrane protein [Azospirillum sp. B510]
gi|288915129|dbj|BAI76613.1| outer membrane protein [Azospirillum sp. B510]
Length = 347
Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 53/198 (26%), Gaps = 24/198 (12%)
Query: 55 SGNYVGLHISRLYETHP---LADTINRKTYNSLLPNGLG-IELGHNIQLEDFVFGINCHT 110
G YVG + G+G + +G+ V G+
Sbjct: 30 EGFYVGAGAGVNWTEDADLGSYPAPGLGLKEKFKIGGIGDLSVGY-----ASVMGLRAEL 84
Query: 111 TAA-----KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG-GFGGAYVIDSSLEKV 164
AA DST + G + L+Y + G I +
Sbjct: 85 EAAWRWRNGIDSTSSATPASNGLGGRTSS---VAFMGNLLYDIDVGLPITPYIGAGAGIA 141
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ N D + + +G Y +N ++L+ YRY S
Sbjct: 142 GVKQTLNGASDRDWVFAYQGI-VGASYAINDKVALTLDYRYFATVDPEFELGPVTS---- 196
Query: 225 VDRKGNAHIASLGINMHF 242
+ H G+ F
Sbjct: 197 -KGEYRNHTILAGLRYSF 213
>gi|46251216|gb|AAS84579.1| truncated Omp25b [Brucella pinnipedialis]
Length = 102
Score = 39.4 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLE-DFVFGI 106
W+G Y+G I + L+D T + P+G G+ G+N + +FV G+
Sbjct: 38 PTFTWNGAYLGGQIGYGWGRSTLSDE---DTSIRVKPDGFLGGLYAGYNFDMGNNFVLGV 94
Query: 107 NCHTT 111
+ T
Sbjct: 95 DGDIT 99
>gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC
35316]
gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316]
Length = 358
Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 64/193 (33%), Gaps = 34/193 (17%)
Query: 58 YVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK- 114
Y G + ++N G G G+ Q+ +V G
Sbjct: 37 YAGGKLGWSQFHDTGWYNSSLNNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGR 93
Query: 115 ----DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D+ K + + K GY V D L +Y G G + DSS D+
Sbjct: 94 MPYKGDNVNGAFKAQGV---QLTAKLGYPVTDDLDVYTRLG-GMVWRADSSNSIAGDDHD 149
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ + DI+ Y+++ N + + V +
Sbjct: 150 T---------GVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDGAT----VGVRP 190
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 191 DNGMLSVGVSYRF 203
>gi|156739606|gb|ABU93463.1| Omp25 [Brucella canis]
Length = 63
Score = 39.4 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K I G + + GY ++ ++ Y G G+ + + N
Sbjct: 2 KQGIEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWT 50
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 51 AGAGLEAKLTDNI 63
>gi|189501054|ref|YP_001960524.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
gi|189496495|gb|ACE05043.1| surface antigen msp4 family protein [Chlorobium phaeobacteroides
BS1]
Length = 227
Score = 39.4 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ G GGA+ S + V N +G +G + LG GL V ++ + A YRY
Sbjct: 134 FLTAGVGGAFY---SFDDVGDINDDRYRGTTNGSTWAYQLGAGLALPVGDNLIVDARYRY 190
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + D ++ ++H A +G+ +F
Sbjct: 191 FDTAEFTTEDDFDAFDDVAMNLDISSHSALVGLRYNF 227
>gi|239950063|gb|ACS36763.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 254
Score = 39.4 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 76/197 (38%), Gaps = 19/197 (9%)
Query: 54 WSGNYVGLH-ISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV-FGINCHTT 111
W+ + ++ ++ YE T + G+ G+ I V G +
Sbjct: 16 WATFHNDINQLNSKYENDARYATSANGYGINRNSVTYGVFGGYQIIDNLAVELGYDYFGR 75
Query: 112 AAKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNS 169
+ F K +G + LK Y V + L +YG GA ++ + + ++++
Sbjct: 76 VRGKEQEFRAFKHSA--HGTHLSLKPSYEVLNGLDVYGK---VGAALVRNDYKFYDTEDK 130
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RV 225
+ +S++LG G++Y + +++ Y+++ ++ + + D
Sbjct: 131 AHNL------KTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGS 184
Query: 226 DRKGNAHIASLGINMHF 242
+AH S GI+ F
Sbjct: 185 TYSPDAHSVSAGISYRF 201
>gi|251792544|ref|YP_003007270.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533937|gb|ACS97183.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 39.4 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 66/204 (32%), Gaps = 26/204 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRK-------TYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
Y G H L R + G+ G+ I ++F
Sbjct: 30 FYAGAKAGWASVRHGLNQYQYRDESDGAVIGKAKINSEAYGVFGGYQI-TDNFAVEAGYE 88
Query: 110 TTAAKDDSTFYRLKEKYFIYGD-VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
F +++ +G + LKA Y ++D+L +Y G V D
Sbjct: 89 FFGRGKVKEFAGGEKRITAHGSSLSLKASYPALDNLDLYARAGAALIRVDY-------KD 141
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI----PHHIHSVNNSNA----- 218
++ +F S V GL+Y + +++L Y+++ SNA
Sbjct: 142 TTEGKTHKFHDLKVSPVFAGGLEYAILPELALRLEYQWVARVGNFGKAERKRSNAYYGPN 201
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ V + SLG++ F
Sbjct: 202 NYNESDVRYSPDIGSVSLGLSYRF 225
>gi|146983|gb|AAA24232.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 39.4 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G + V ++ KN G S V G++
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESDKNHDT-----GVSPVFAGGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +I+ Y++ + N +A + R D + SLG++ F
Sbjct: 56 WAITPEIATRLEYQW------TNNIGDANTIGTRPDN----GLLSLGVSYRF 97
>gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 364
Score = 39.0 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 28/193 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G G+ Q+ + G
Sbjct: 37 YAGGKLG--WSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDW 91
Query: 113 AKDDSTFYRLKEKYFIYGDV--VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + F V K GY + D L IY G G + DS + S
Sbjct: 92 LGRMAYKGSVDNGAFKAQGVQLTAKLGYPITDDLDIYTRLG-GMVWRADSKGNYASTGVS 150
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
++ G S V G+++ V DI+ Y+++ N +A + R D
Sbjct: 151 RSEHDT----GVSPVFAGGVEWAVTRDIATRLEYQWVN------NIGDAGTVGTRPDN-- 198
Query: 230 NAHIASLGINMHF 242
+ SLG++ F
Sbjct: 199 --GMLSLGVSYRF 209
>gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
Length = 358
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 56/195 (28%), Gaps = 31/195 (15%)
Query: 58 YVGLHISRLYETHP----LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYQDTGTGGIYGDLGNDGPTHKNQLGAGAFLGY--QANQY-LGFEMGYDWL 85
Query: 114 K-----DDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
D+ K + + K Y V L +Y G S+ +
Sbjct: 86 GRMPYKGDTRNGDFKAQGV---QLAAKLSYPVAQDLDLYTRLGGLVWRADSSAFDAESGA 142
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
S N G S ++ +G +Y + + Y+++ +I A+ D
Sbjct: 143 RSSNHDT-----GVSPLVALGAEYAWTKNWATRMEYQWVS-NIGDKGTVGARPD------ 190
Query: 228 KGNAHIASLGINMHF 242
+ S+G++ F
Sbjct: 191 ---NGMLSVGVSYRF 202
>gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3]
gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3]
Length = 364
Score = 39.0 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 28/193 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G G+ Q+ + G
Sbjct: 37 YAGGKLG--WSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDW 91
Query: 113 AKDDSTFYRLKEKYFIYGDV--VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + F V K GY + D L IY G G + DS + S
Sbjct: 92 LGRMAYKGSVDNGAFKAQGVQLTAKLGYPITDDLDIYTRLG-GMVWRADSKGNYASTGVS 150
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
++ G S V G+++ V DI+ Y+++ N +A + R D
Sbjct: 151 RSEHDT----GVSPVFAGGVEWAVTRDIATRLEYQWVN------NIGDAGTVGTRPDN-- 198
Query: 230 NAHIASLGINMHF 242
+ SLG++ F
Sbjct: 199 --GMLSLGVSYRF 209
>gi|156739548|gb|ABU93434.1| Omp25 [Brucella abortus]
gi|156739556|gb|ABU93438.1| Omp25 [Brucella abortus]
gi|156739560|gb|ABU93440.1| Omp25 [Brucella melitensis]
gi|156739564|gb|ABU93442.1| Omp25 [Brucella melitensis]
gi|156739578|gb|ABU93449.1| Omp25 [Brucella melitensis]
gi|156739582|gb|ABU93451.1| Omp25 [Brucella melitensis]
gi|156739584|gb|ABU93452.1| Omp25 [Brucella melitensis]
gi|156739588|gb|ABU93454.1| Omp25 [Brucella melitensis]
gi|156739592|gb|ABU93456.1| Omp25 [Brucella suis]
gi|156739598|gb|ABU93459.1| Omp25 [Brucella suis]
gi|156739620|gb|ABU93470.1| Omp25 [Brucella pinnipedialis]
gi|156739622|gb|ABU93471.1| Omp25 [Brucella pinnipedialis]
gi|156739624|gb|ABU93472.1| Omp25 [Brucella pinnipedialis]
gi|156739626|gb|ABU93473.1| Omp25 [Brucella pinnipedialis]
Length = 64
Score = 39.0 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 2 KQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWT 50
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 51 AGAGLEAKLTDNI 63
>gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320]
gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320]
Length = 362
Score = 39.0 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 29/189 (15%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W G +G ++ A YN LG ELG++ L + + + A
Sbjct: 46 WDGVNIGN--GSTHKDQIGAGAFAGYQYNQY----LGFELGYDW-LGRMAYKGSYNNGAF 98
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K K Y + +D L +Y G G + DS+ + +
Sbjct: 99 KAQGIQLTTKLSYPV-----------MDDLDVYTRLG-GMVWRADSTATINATSAGTQKR 146
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ G S V +G +Y + +I+ Y++I +I NA+ D +
Sbjct: 147 FSENDTGVSPVFALGTEYAITPNIATRLEYQWIN-NIGDKGTLNARPD---------NGM 196
Query: 234 ASLGINMHF 242
S+G+ F
Sbjct: 197 LSVGVAYRF 205
>gi|300722575|ref|YP_003711865.1| outer membrane protein 3a [Xenorhabdus nematophila ATCC 19061]
gi|218157851|gb|ACK58677.1| OpnT [Xenorhabdus nematophila]
gi|297629082|emb|CBJ89667.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus nematophila ATCC
19061]
Length = 369
Score = 39.0 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 57/154 (37%), Gaps = 22/154 (14%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGM 148
LG ELG++ L + + + A + K Y + +D+L +Y
Sbjct: 75 LGFELGYDW-LGRMAYKGSINNGAFRAQGVQLTTKLSYPV-----------MDNLDVYTR 122
Query: 149 GGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
G S+ + + + + G S + IG++Y + +++ Y+++
Sbjct: 123 LGGMVWRTDSSATYNANAASPTQLRKKDHDTGVSPLAAIGVEYALAKNLATRIDYQWV-- 180
Query: 209 HIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
N D V + + + S+G++ F
Sbjct: 181 --------NNIGDATTVGARPDNGMLSVGVSYRF 206
>gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1]
gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1]
Length = 338
Score = 39.0 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 29/170 (17%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y+G + + + T + G+ G++ D++
Sbjct: 24 GFYLGGRLGGSQLSDACNVSAAPCTDSGFSA---GVYTGYDW--NDYIA----------- 67
Query: 116 DSTFYRLKEKYFIYGDVVLK----AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
L+ Y G A Y D+ L + + E
Sbjct: 68 ------LEFAYDWLGSYETSFVDGAEYRRDANLSALT--LAPKFSYPFNDEWAIFGKVGA 119
Query: 172 AKGRFDGHGSSVVLGI-GLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
A +D S+ ++G GL+Y S Y+ I N++ +
Sbjct: 120 AYTMYDDRKSTALMGGVGLEYDFATAWSGRLEYQRINDAKDDWFNTDVDT 169
>gi|312963313|ref|ZP_07777796.1| outer membrane protein [Pseudomonas fluorescens WH6]
gi|311282393|gb|EFQ60991.1| outer membrane protein [Pseudomonas fluorescens WH6]
Length = 232
Score = 39.0 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 83/260 (31%), Gaps = 46/260 (17%)
Query: 1 MNFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVG 60
MN + GA F + L V + A D+ + N ++ + D G G
Sbjct: 1 MNKSLLGASLFALALVAPVAHAHEAGDILVRAGAITVNPKADSSTVKVD-----QGPLAG 55
Query: 61 LHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST-- 118
++ + T +S GL +F + + H +T
Sbjct: 56 ANLG------------GKATMSSDTQLGL-----------NFAYMLTNHVGIELLAATPF 92
Query: 119 FYRLKEKYFIYGDVVLKAG-------------YSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ +K K G K G Y +D+ + G E V
Sbjct: 93 EHDVKIKGTALGAANGKLGTLKHLPPTLSVVYYPLDNKSAFQPYVGAGINYTWIYDEHVG 152
Query: 166 SDNSKNAKGRFDG-HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSV--NNSNAKSDV 222
S S+ F + IG DYM+N ++A RYI + NN+ A
Sbjct: 153 SRASEAGFSNFKAENSWGWAAQIGADYMINDKWMINAQARYIDISTKATVENNAVAPGTR 212
Query: 223 ERVDRKGNAHIASLGINMHF 242
+V+ + + +GI F
Sbjct: 213 AKVNVDVDPMVYMVGIGYKF 232
>gi|170744188|ref|YP_001772843.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46]
gi|168198462|gb|ACA20409.1| hypothetical protein M446_6134 [Methylobacterium sp. 4-46]
Length = 209
Score = 39.0 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 51/160 (31%), Gaps = 19/160 (11%)
Query: 49 DEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINC 108
DE WSG+Y L A ++ +S P +G E G Q V+G++
Sbjct: 54 DEETRWSGSYAALSTG-------FAAVSSKHFGSSAGPT-VGFEGGRMWQEGRLVYGVSG 105
Query: 109 HTTAAKDDSTFYRLKEKYFIY-----GDVVLKAG-YSVDSLLIYGMGGFGGAYVIDSSLE 162
Y G + +K G +L+Y G +
Sbjct: 106 GFDFLSALGGGAAPGFGGLAYSRDLAGGLEVKVGALLTPDVLVYAKAGAVAVHETL---- 161
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+V + R D +G+++ V +S++
Sbjct: 162 RVGPTAVSRSFARED-LAVRPEARVGVEWAVTDRLSVAVE 200
>gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing
protein [Pantoea sp. At-9b]
gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. At-9b]
Length = 356
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 54/190 (28%), Gaps = 24/190 (12%)
Query: 58 YVGLHISRLYETHPLAD---TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N G G LG+ Q + G
Sbjct: 29 YTGAKLGWSQYHDTGYYGNGYENNNGPTHESQLGAGAFLGY--QANPY-LGFELGYDWLG 85
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
R+ K G + + L Y + Y + N
Sbjct: 86 ------RMPNKGSEINGAFKAQGVQLAAKLSYPITDDLDVYTRLGGMVWRADSTQNNNGV 139
Query: 175 RFDGHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
R H + V + +G++Y + + + Y+++ N +A + R D
Sbjct: 140 RISDHDTGVSPLAAVGVEYALTKNWATRLDYQWVN------NIGDAGTVGARPDNS---- 189
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 190 MLSVGVSYRF 199
>gi|284007554|emb|CBA73076.1| outer membrane protein A [Arsenophonus nasoniae]
Length = 353
Score = 39.0 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 58/192 (30%), Gaps = 27/192 (14%)
Query: 58 YVGLHISRLY----ETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + HP D + G G LG+ Q + G
Sbjct: 33 YTGAKLGWSHFEDTGFHPYGDNVGS-GKTKRDQLGAGAYLGY--QHNQY-LGFELGYDW- 87
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS---LEKVESDNSK 170
F R++ + G + + L Y + Y +++
Sbjct: 88 -----FGRMRYSGQPNNGSLKSMGVQLTARLSYPLTDELDVYTRLGGMVWRTDAKANVEN 142
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ G S V +G +Y + + + Y+++ H D + + + +
Sbjct: 143 QPSFKEHDTGVSPVYALGFEYAITPEWATRLDYQWVSHI----------GDKDSLSVRPD 192
Query: 231 AHIASLGINMHF 242
+ S+G+ F
Sbjct: 193 NGMLSVGVAYRF 204
>gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703]
Length = 363
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 58/202 (28%), Gaps = 45/202 (22%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + Y+ + + G G LG+ Q + G
Sbjct: 35 YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEM----- 86
Query: 114 KDDSTFYRLKEKYFIYGDVV------------LKAGYSVDSLL-IYGMGGFGGAYVIDSS 160
Y + GDV K Y + L +Y G S+
Sbjct: 87 -----GYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGMVWRADSSA 141
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + N G S ++ +G +Y + + Y+++ +
Sbjct: 142 FDATTGARANNHDT-----GVSPLVALGAEYAWTKNWATRMEYQWVSNI----------G 186
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 187 DKATVGARPDNGMLSVGVSYRF 208
>gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565]
gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 364
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 25/155 (16%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYG 147
LG ELG++ G T+ ++ K + +K + ++L +YG
Sbjct: 79 LGFELGYDW------LGKYDTTSGTGANTLNTEAKSQMI---QATMKISFPATNVLDLYG 129
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G A+ S+ K F G +G +Y ++ D + Y+Y
Sbjct: 130 RLGGAYAWTDSEISFANTSETGKKHGAAFVG-------ALGAEYAIDRDWAARLEYQY-- 180
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ ++R + + + S G+ F
Sbjct: 181 ------TTPLGDASLDRSGIEMDNGLISFGMLYRF 209
>gi|229485743|sp|P0C8Z2|OMPA_ESCFE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146991|gb|AAA24236.1| outer membrane protein II [Escherichia fergusonii]
gi|146999|gb|AAA24240.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 39.0 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 16/112 (14%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G + V ++ KN G S V G++
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADTKAHNNVTGESEKNHDT-----GVSPVFAGGVE 55
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + +I+ Y++ + N +A + R D + SLG++ F
Sbjct: 56 WAITPEIATRLEYQW------TNNIGDANTIGTRPDN----GLLSLGVSYRF 97
>gi|298369428|ref|ZP_06980746.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014
str. F0314]
gi|298283431|gb|EFI24918.1| hypothetical protein HMPREF9016_01098 [Neisseria sp. oral taxon 014
str. F0314]
Length = 361
Score = 39.0 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 17/146 (11%)
Query: 92 ELGHNIQLEDFVFGINCHTTA------AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI 145
++G +Q +++ G + A ++ +++ + YG + +
Sbjct: 227 QVGAGVQFNEWLGGEVYYQGGDKQEYDAPENLGNEKVEVRNDTYGGRLTAGTKVAKKARV 286
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
+ G G + +SD A G+G VN + ++ A Y +
Sbjct: 287 FAKAGVAGVRHKSKTAGAKDSDTKARA-----------TAGVGATVDVNDNWAVRADYDH 335
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNA 231
+ +D V +
Sbjct: 336 YFKRNSDEDVKWKGADYLGVGAQYKF 361
>gi|49182354|gb|AAT57679.1| OmpA [Pasteurella multocida]
Length = 353
Score = 39.0 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 74/223 (33%), Gaps = 12/223 (5%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN 82
++A+ + + A + W+ + GL+ ++ E R +
Sbjct: 5 AIALTIVALAVASVAQAAPQPNTFYVGAKAGWASFHDGLNQAKYLEAPEATFGFKRNSVT 64
Query: 83 SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-D 141
+ G I ++L FG A+ D + + + LKA Y V D
Sbjct: 65 YGVFGGYQITDDFAVELGYDDFG-RAKLRIAETDQKARDVAKHTNHGAHLSLKASYPVLD 123
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
L +Y G + + K S V GL+Y +++L
Sbjct: 124 GLDVYARVGAALIRSDYKVYDHSDPAKLPQLKRTHS-TQVSPVFAGGLEYAFMPELALRV 182
Query: 202 SYRYIP--HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+++ + V+ + RVD + + + G++ F
Sbjct: 183 EYQWVNNVGKLKDVDGN-------RVDYRPDIGSVTAGLSYRF 218
>gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043]
gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043]
Length = 366
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 25/190 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAA 113
+G Y + +P+ + + N LG ELG++ L + +TA+
Sbjct: 42 TGFY--GNGYTGVNNNPIKSKLGAGAFVGYQANPYLGFELGYDW-LGRMKY---AGSTAS 95
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
DDS K + + K Y V L +Y GG S + A
Sbjct: 96 NDDSA--SFKAQGI---QLAAKLSYPVMPDLDVYTR--LGGMVWRADSHAATSVNTGTRA 148
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D G S + IG++Y ++ + + Y+++ N +A + R D
Sbjct: 149 DINNDDTGVSPLAAIGVEYAIDKNWATRVDYQWVS------NIGDAGTVGARPDNL---- 198
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 199 LMSVGLSYRF 208
>gi|327393374|dbj|BAK10796.1| outer membrane protein A precursor OmpA [Pantoea ananatis AJ13355]
Length = 363
Score = 39.0 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 24/191 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAAK 114
Y G + N + + G G G+ Q + G
Sbjct: 35 YTGAKLGWSQYHDTGYYGHNYQNNDGPTHESQLGAGAFAGY--QANPY-LGFELGYDWLG 91
Query: 115 -DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ ++ + G + K Y + D L IY G + +
Sbjct: 92 RMPNKGNQINGAFKAQGIQLAAKLSYPIADDLDIYTRLGGMVWRADSTQQNLATGTRISD 151
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G S + +G++Y + + + Y+++ N +A++ V + +
Sbjct: 152 HDT-----GVSPLAAVGVEYALTKNWATRLDYQWVN------NIGDAQT----VGARPDN 196
Query: 232 HIASLGINMHF 242
+ SLG++ F
Sbjct: 197 GMLSLGVSYRF 207
>gi|100913602|gb|ABF69692.1| Pap31 hemin-binding protein [Bartonella henselae]
Length = 181
Score = 39.0 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 17/112 (15%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 4 IALISASAAQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD 55
Query: 75 TINRKTY-----NSLLPNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
N+K ++ P+G GI G N+ L + + G+ A +
Sbjct: 56 -PNKKDKLFSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDA 106
>gi|156739632|gb|ABU93476.1| Omp25 [Brucella neotomae]
Length = 63
Score = 39.0 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K I G + + GY ++ ++ Y G G+ + + N
Sbjct: 2 KQGIEGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWT 50
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 51 AGAGLEAKLTDNI 63
>gi|225850221|ref|YP_002730455.1| aromatic hydrocarbon degradation membrane protein [Persephonella
marina EX-H1]
gi|225646273|gb|ACO04459.1| membrane protein involved in aromatic hydrocarbon degradation
[Persephonella marina EX-H1]
Length = 444
Score = 38.6 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 7/165 (4%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W +G + + + DT G+G LG N + + N A+
Sbjct: 194 WGSLDLGAELGYDSDGDGIPDTFFNAGGGQSQSYGIGASLGINFKPTE-----NICIGAS 248
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG-GFGGAYVIDSSLEKVESDNSKNA 172
S K + GD + ++ + +G G+ + + S
Sbjct: 249 YQSSVKMTYKNVFDSNGDGKFE-DLKLEQPQEFAVGVGYRPVETFKIGFDVRWINWSDAD 307
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN 217
+ V +G +Y V ++L A Y Y I S +N N
Sbjct: 308 GYKQFKWEDQWVFAVGGEYKVTPKLALRAGYNYGKTPIKSKSNLN 352
>gi|120601339|ref|YP_965739.1| aromatic hydrocarbon degradation membrane protein [Desulfovibrio
vulgaris DP4]
gi|120561568|gb|ABM27312.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfovibrio vulgaris DP4]
Length = 401
Score = 38.6 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 24/224 (10%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRK 79
P A + F E + G +G GL+ + D
Sbjct: 151 PTKDFAFGFGVEAMYFDFEEKMRPLGMDARIKGDSTGF--GLNGGMWW--QAFDDVALGA 206
Query: 80 TYNSLLPNGLGIELGH-NIQLEDFVFG-INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG 137
++ + + + N+ +G + T A D + ++ + + G
Sbjct: 207 SFRTPVKQHVKGRATFDNVPAG---YGPLFRDTDAEGDITLPGEVRFGVYWQ--ATERLG 261
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
V M F +Y ++ K A + L G +Y + ++
Sbjct: 262 VEVG-----AMRTFWSSYDELR-IDYGSPVGGKPASIKQTEWEDVWRLSAGAEYRLTDNV 315
Query: 198 SLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMH 241
L A Y Y VN+++ V DR H+ SLG+ H
Sbjct: 316 DLRAGYVY---DEEPVNSAHLDFMVPANDR----HLMSLGVGYH 352
>gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae]
Length = 344
Score = 38.6 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 28/193 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G G+ Q+ ++ G
Sbjct: 17 YAGGKLG--WSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPYL-GFEMGYDW 71
Query: 113 AKDDSTFYRLKEKYFIYGDV--VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + F V K GY + D L IY G G + DS + S
Sbjct: 72 LGRMAYKGSVDNGAFKAQGVQLTAKLGYPITDDLDIYTRLG-GMVWRADSKGNYASTGVS 130
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
++ G S V G+++ V DI+ Y+++ N +A + R D
Sbjct: 131 RSEHDT----GVSPVFAGGVEWAVTRDIATRLEYQWVN------NIGDAGTVGTRPDN-- 178
Query: 230 NAHIASLGINMHF 242
+ SLG++ F
Sbjct: 179 --GMLSLGVSYRF 189
>gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044]
gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae
gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 356
Score = 38.6 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 28/193 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G G+ Q+ + G
Sbjct: 29 YAGGKLG--WSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGY--QVNPY-LGFEMGYDW 83
Query: 113 AKDDSTFYRLKEKYFIYGDV--VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + F V K GY + D L IY G G + DS + S
Sbjct: 84 LGRMAYKGSVDNGAFKAQGVQLTAKLGYPITDDLDIYTRLG-GMVWRADSKGNYASTGVS 142
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
++ G S V G+++ V DI+ Y+++ N +A + R D
Sbjct: 143 RSEHDT----GVSPVFAGGVEWAVTRDIATRLEYQWVN------NIGDAGTVGTRPDN-- 190
Query: 230 NAHIASLGINMHF 242
+ SLG++ F
Sbjct: 191 --GMLSLGVSYRF 201
>gi|217971469|ref|YP_002356220.1| OmpA domain-containing protein transmembrane region-containing
protein [Shewanella baltica OS223]
gi|217496604|gb|ACK44797.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS223]
Length = 187
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 67/188 (35%), Gaps = 27/188 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVG ++++ +S GLG G+N ++ FG+ + A
Sbjct: 27 TGFYVGGALNKV-------TLDGDDVTDSRSGTGLGAYGGYN--FNEW-FGLEANLFATG 76
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
D + A + D +Y G + L K ES+
Sbjct: 77 DLGNKDVDASAGALSFTPKFTAHIN-DIFSVYAKAGVA------TMLVKFESNGQ----- 124
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ D G G G++ V +++ SY + + NNS +D++ +
Sbjct: 125 KLDFTGFGWTYGAGVNAAVTEHLNIRVSYDVTTGKLDADNNSLGLNDID-----TDIKQF 179
Query: 235 SLGINMHF 242
++G++ F
Sbjct: 180 AVGVHYQF 187
>gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1]
gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1]
Length = 343
Score = 38.6 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 42/195 (21%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN-IQLEDFVFGINCHTTAAKDD 116
Y+G + + + + + LG +G+ Q +G+ +
Sbjct: 37 YLGGKLGAMKYQNACEEWAVDCDGTDV---ALGGFIGYQVWQH----WGLELGYLDFGEA 89
Query: 117 STFYRLKEKYFIYG--------DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
Y + Y VV + + D+L + G +S + +D
Sbjct: 90 KALYPEGGRVNQYSGSMSGIEMSVVGRISVT-DNLDAFAKAGTLYWQGKNSGPTRSLTD- 147
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH-HIHSVNNSNAKSDVERVDR 227
DG G+GL+Y + + Y+Y+ + SN
Sbjct: 148 --------DGWAP--TAGVGLEYHFSNHWAGRVEYQYVNALGSDKLGGSNG--------- 188
Query: 228 KGNAHIASLGINMHF 242
H+A+LGI F
Sbjct: 189 ----HLATLGIVYRF 199
>gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638]
gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein
[Enterobacter sp. 638]
Length = 351
Score = 38.6 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 64/193 (33%), Gaps = 34/193 (17%)
Query: 58 YVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK- 114
Y G + ++N G G G+ Q+ +V G
Sbjct: 29 YAGGKLGWSQFHDTGWYNSSLNNDGPTHESQLGAGAFGGY--QVNPYV-GFEMGYDWLGR 85
Query: 115 ----DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D+ K + + K GY V D L +Y G G + DSS D+
Sbjct: 86 MPYKGDNVNGAFKAQGV---QLTAKLGYPVTDDLDVYTRLG-GMVWRADSSNSIAGDDHD 141
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ + DI+ Y+++ N + + V +
Sbjct: 142 T---------GVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDGNT----VGVRP 182
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 183 DNGMLSVGVSYRF 195
>gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114]
gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114]
Length = 324
Score = 38.6 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 28/189 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y+G + + L + G G+ G+ Q + F +
Sbjct: 21 YLGGQVGVSHF---LGACSSNAIECKNYVTGGGLYGGY--QFNSW-FALEGSWHDYGSPK 74
Query: 118 TFYRLKEKYFIYG---DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
TFY + + Y+ D+ +K V D+L +Y GG Y+ S + V
Sbjct: 75 TFYGVGDGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVSGNDNV-------HL 127
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G F+ S ++ + A Y P+ S K + +
Sbjct: 128 GMFESDSS-----------IDDIWEIGAEYALAPNWSLRFGTSIIDGIGNAKTGKSDLYF 176
Query: 234 ASLGINMHF 242
SLG+ F
Sbjct: 177 TSLGLTYKF 185
>gi|93007277|ref|YP_581714.1| OmpA-like transmembrane region [Psychrobacter cryohalolentis K5]
gi|92394955|gb|ABE76230.1| OmpA-like transmembrane region [Psychrobacter cryohalolentis K5]
Length = 179
Score = 38.6 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 86 PNGLGIELGHNIQLEDFVFGINCHTTAAKD-DSTFYRLKEK-YFIYGDVVLKAGYSVDSL 143
P G+ G+N FG+ + D D + K Y YG Y+ +
Sbjct: 54 PTAYGVYAGYNFDPN---FGMEAEFVGSDDADYRGGDIDAKTYGAYGTYR----YAFPNT 106
Query: 144 LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
+Y G G A + + S +S+ G+GL Y VN + S+ A Y
Sbjct: 107 GLYAKGKLGVARTEIEA-----TGTSPAGFYNGSNKDTSLAGGVGLGYSVNPNFSVEAEY 161
Query: 204 R 204
Sbjct: 162 D 162
>gi|156739526|gb|ABU93423.1| Omp25 [Brucella neotomae]
gi|156739608|gb|ABU93464.1| Omp25 [Brucella ovis]
Length = 63
Score = 38.6 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 2 KQGFEGSLRARVGYDLNPVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWT 50
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 51 AGAGLEAKLTDNI 63
>gi|320577122|gb|ADW54070.1| outer membrane protein A [Sodalis glossinidius]
Length = 358
Score = 38.6 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 25/193 (12%)
Query: 58 YVGLHISRLYETHP--LADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + + N + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGY--QANPY-LGFELGYDW 85
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + F + L A S D L IY G G + DS K DN
Sbjct: 86 LGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLDIYTRLG-GMVWRADS---KGAYDNG 141
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G S + +GL+Y + + Y+++ N +A + R D
Sbjct: 142 NAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWVN------NIGDAGTVGTRPDNS- 194
Query: 230 NAHIASLGINMHF 242
+ S+G++ F
Sbjct: 195 ---MLSVGVSYRF 204
>gi|85059008|ref|YP_454710.1| outer membrane protein A [Sodalis glossinidius str. 'morsitans']
gi|84779528|dbj|BAE74305.1| outer membrane protein A precursor [Sodalis glossinidius str.
'morsitans']
Length = 356
Score = 38.6 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 25/193 (12%)
Query: 58 YVGLHISRLYETHP--LADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + + N + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYHDTGFYGNGFDNRIANGPTRDDQLGAGAFLGY--QANPY-LGFELGYDW 85
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSV---DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ + F + L A S D L IY G G + DS K DN
Sbjct: 86 LGRMAYKGSVNNGAFKAQGISLAAKLSYPLTDDLDIYTRLG-GMVWRADS---KGAYDNG 141
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G S + +GL+Y + + Y+++ N +A + R D
Sbjct: 142 NAGRVSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWVN------NIGDAGTVGTRPDNS- 194
Query: 230 NAHIASLGINMHF 242
+ S+G++ F
Sbjct: 195 ---MLSVGVSYRF 204
>gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
Length = 358
Score = 38.6 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 57/202 (28%), Gaps = 45/202 (22%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + Y+ + + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEM----- 80
Query: 114 KDDSTFYRLKEKYFIYGDVV------------LKAGYSVDSLL-IYGMGGFGGAYVIDSS 160
Y + GDV K Y + L +Y G S+
Sbjct: 81 -----GYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGMVWRADSSA 135
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ N G S ++ +G +Y + + Y+++ +
Sbjct: 136 FNAASGERLNNHDT-----GVSPLVALGAEYAWTKNWATRMEYQWVSNI----------G 180
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 181 DKATVGARPDNGMLSVGVSYRF 202
>gi|262404049|ref|ZP_06080604.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262349081|gb|EEY98219.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 335
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 47/208 (22%)
Query: 9 LFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYE 68
LF + FL++ + + ++ K +D+ +Y IW G Y GL S +
Sbjct: 6 LFIINFLAVNSWAATGSSPFFMGVKYGYQLASDDAYKYSTPTGSIW-GIYAGLQFSPSWS 64
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFI 128
++G+ E +N T+ ++ +Y
Sbjct: 65 W----------------------DIGYQYHDE-----LNADMTSVTVNTWLIESALRYNW 97
Query: 129 YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
Y D+L +YG G ++EK++ ++ + G +G
Sbjct: 98 ---------YLQDNLSLYGRFGAAYW-----NMEKMQPSLNQVSATGLSPLGE-----VG 138
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ Y + +SLS Y+YI S
Sbjct: 139 VSYNLTPRLSLSTGYQYIDRIGKSNTGK 166
>gi|186477368|ref|YP_001858838.1| OmpA domain-containing protein [Burkholderia phymatum STM815]
gi|184193827|gb|ACC71792.1| OmpA domain protein transmembrane region-containing protein
[Burkholderia phymatum STM815]
Length = 170
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 36/151 (23%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
+SG YVG + + + N+ T++++ P G+ G+ V G
Sbjct: 30 DFSGPYVGAKLGVNVSS--ASGATNKPTHSTIFP---GLVAGYGFNAGPVVLGAELFADL 84
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+TF G + K GY + SL+ Y G
Sbjct: 85 HHGSATFKD--------GGIDAKIGYPIGSLMPYARLGV--------------------- 115
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASY 203
D S G+G++YMV ++SL + +
Sbjct: 116 --TTDWPASRFNYGLGVEYMVMKNLSLFSEW 144
>gi|332532064|ref|ZP_08407947.1| hypothetical protein PH505_ac00200 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038405|gb|EGI74849.1| hypothetical protein PH505_ac00200 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 215
Score = 38.6 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 56/183 (30%), Gaps = 19/183 (10%)
Query: 56 GNYVGLHIS------RLYETHPLADTINRKTYNSLLPNGLGIELGHNI-----QLEDFVF 104
G Y G+ I ++ R Y L +G + L V+
Sbjct: 28 GYYQGIGIGSTQIDVYESDSIQFTTLYGRFGYQFSRYFALEGRIGFGLNDESTPLNGIVY 87
Query: 105 GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFG-------GAYV 156
N + + + + + +KA Y + ++ GG+G +
Sbjct: 88 TQNPQDGSLSSEFIKSEIDSSLDLQTSIFVKANYPISSRADVFLFGGYGRNKLSYNEGDL 147
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
+ + +D + + V G G+D+ + +SA Y+Y + +
Sbjct: 148 KNLAESITGTDTNSTLITEQNYDEGGVTYGTGIDFRLTQRWQVSAEYQYFDTNEGDIYAL 207
Query: 217 NAK 219
N
Sbjct: 208 NLS 210
>gi|238789280|ref|ZP_04633067.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
gi|238722612|gb|EEQ14265.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
Length = 357
Score = 38.6 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 56/202 (27%), Gaps = 45/202 (22%)
Query: 58 YVGLHISRLYETHP----LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + + + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYQDTGTGGIYGDVGNDGPTHKNQLGAGAFLGY--QANQY-LGFEM----- 80
Query: 114 KDDSTFYRLKEKYFIYGDVV------------LKAGYSVDSLL-IYGMGGFGGAYVIDSS 160
Y + GDV K Y + L +Y G S+
Sbjct: 81 -----GYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGMVWRADSSA 135
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ S N G S ++ +G +Y + + Y+++ +
Sbjct: 136 FDATSGLRSNNHDT-----GVSPLVALGAEYAWTKNWATRMEYQWVSNI----------G 180
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 181 DKATVGARPDNGMLSVGVSYRF 202
>gi|144900280|emb|CAM77144.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 319
Score = 38.6 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 34/167 (20%)
Query: 101 DFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD------------------- 141
+ G++ +D + + G + + GYS
Sbjct: 23 QWYVGLDGGANYMQDPGSSTGADSDWGWVG--LGQVGYSFGAPKVEFEVGYRANDSIDSI 80
Query: 142 SLLIYG------MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
S ++ G G + ++ D + N D +G + G+ Y ++
Sbjct: 81 STMVNGIYDFMPTGKWHPFVGAGIGWAWLDGDFAGNNARNSD-NGFAYQGIAGVGYDIDN 139
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ L A YRY V +N+ D H G F
Sbjct: 140 NWGLKAQYRYFATLDADVGTANSG------DSDYRNHSILAGFTYKF 180
>gi|156739586|gb|ABU93453.1| Omp25 [Brucella melitensis]
Length = 64
Score = 38.6 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 2 KQGFEGSLRARVGYDLNPVMPYLTAGIVGSQIKLN-----------NGLDDESKFRVGWT 50
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 51 AGAGLEAKLTDNI 63
>gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 348
Score = 38.6 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 66/186 (35%), Gaps = 27/186 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAAK 114
Y G+ + + ++ T +L + + G+ G+NI + +T +
Sbjct: 27 FYAGVRVGGAHYSN-FQQNYQDVTGINLNKDDVAAGLFAGYNIT--PWFAVETGYTWLGE 83
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++K+ F D+ KA + ++ +G+ G G + +
Sbjct: 84 AKFQHNKIKQHAF---DLTGKATWHLNDK--WGVFGKLGGSYMLTDFHGY-------GIK 131
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
D H +G G++Y + +S Y+ + KS+ +++ N
Sbjct: 132 DIDEHLVG-TVGAGVEYQLTDHLSTRLEYQLYH---------DLKSNPRYTNQEYNFDTQ 181
Query: 235 SLGINM 240
G+++
Sbjct: 182 FYGLSL 187
>gi|218678361|ref|ZP_03526258.1| outer membrane protein [Rhizobium etli CIAT 894]
Length = 96
Score = 38.6 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 8/62 (12%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCH 109
G W G Y+G + + + G+N Q V+G+
Sbjct: 43 PAGNWEGFYLGGAGTYNMGSFGSDRHTYGFGGQ--------VFTGYNWQQGQIVYGVESD 94
Query: 110 TT 111
Sbjct: 95 LG 96
>gi|99032472|pdb|2GE4|A Chain A, High-Resolution Solution Structure Of Outer Membrane
Protein A Transmembrane Domain
Length = 177
Score = 38.6 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 22/185 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + IN G G G+ Q+ +V G
Sbjct: 9 YTGAKLGFSQYHD--TGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDFLG--- 60
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
R+ K + G + + L Y + Y + +D N G+
Sbjct: 61 ---RMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVF-RADTKSNVYGKNH 116
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G S V G++Y + +I+ Y++ + N +A + R D + SLG
Sbjct: 117 DTGVSPVFAGGVEYAITPEIATRLEYQF------TNNIGDAHTIGTRPDN----GMLSLG 166
Query: 238 INMHF 242
++ F
Sbjct: 167 VSYRF 171
>gi|24375049|ref|NP_719092.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24349795|gb|AAN56536.1|AE015790_7 OmpA family protein [Shewanella oneidensis MR-1]
Length = 370
Score = 38.6 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 48/179 (26%), Gaps = 18/179 (10%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + H D + P I G+ D+ + D
Sbjct: 34 YVGAGLGVNNYEHIATDNGDD------NPYAWDIFAGY--MFNDYFGAEIGYRDLGSADW 85
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T + + G + G ++ +G ++ ++
Sbjct: 86 TTGGISNDAGVKGATLGLVG-------VWPLGNRWSLSAEAGAMYYTLENSQHTGTTSSS 138
Query: 178 GHGSSVV--LGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ +G G+ Y ++ L A Y RY N A S+ ++
Sbjct: 139 YSSNDFAPYVGAGVGYNFTDNLKLQAKYRRYENLDDTDFNTIEADSNYWGLELSYRFGT 197
>gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 352
Score = 38.6 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 29/155 (18%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYG 147
LG+ELG++ L + + D + +K + + +K G V L +Y
Sbjct: 75 LGVELGYDW-LGKYKYTATDKLIPT--DISRDEIKAQ---LAQLTMKIGLPVSESLDLYT 128
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G A+ L+ + +G++ V +G +Y N D + Y+Y
Sbjct: 129 RLGGAYAWTDSKQLD--------------NDNGAAFVGALGAEYAFNRDWAARLEYQY-- 172
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++ + + + ++G+ F
Sbjct: 173 ------TTPLGDKALDKTGAELDNGLLAVGVVYRF 201
>gi|145641242|ref|ZP_01796822.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
gi|145274079|gb|EDK13945.1| Outer membrane protein P5 [Haemophilus influenzae 22.4-21]
Length = 358
Score = 38.2 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 29/198 (14%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
Y N+ + LG+ + F +G+ D+ + Y
Sbjct: 29 YAGVKAGQGSFHDGINNNGAIKEDLTLGYGYRRNTFTYGVFGGYQILNQDNFGLAAELGY 88
Query: 127 FIYGDVVLKA-------------------GYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
+G V +A Y V D L +YG G E ++
Sbjct: 89 DNFGRVKFRAEGKTKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYE--DA 146
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHSVNNSNAKSDVER 224
+ +++ K +S + +G +Y V ++++ Y+++ + N
Sbjct: 147 NGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWLTRVGKYRPQDKPN-----TA 201
Query: 225 VDRKGNAHIASLGINMHF 242
++ + GI+ F
Sbjct: 202 INYNPWIGSINAGISYRF 219
>gi|329755830|gb|AEC04312.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 38.2 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 63/201 (31%), Gaps = 20/201 (9%)
Query: 57 NYVGLHISRLYETHPLA-----DTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCH 109
YVG + L + N + G+ G+ I V
Sbjct: 28 FYVGAKAGWAFFHDGLNQAKDLSSAANSGTFGFKRNSVTYGVFGGYQITDNFAVELGYDD 87
Query: 110 TTAAKDDSTFYRLKE----KYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEK 163
AK + LK K+ +G + LKA Y V L +Y G
Sbjct: 88 FGRAKLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYND 147
Query: 164 VESD--NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
+ + R S V GL+Y +++L Y+++ + +
Sbjct: 148 AKGEPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG---- 203
Query: 222 VERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 204 -ERVDYRPDIGSVTAGLSYRF 223
>gi|170694344|ref|ZP_02885498.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
gi|170140767|gb|EDT08941.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
Length = 172
Score = 38.2 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 50/192 (26%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
++G YVG + + N+ ++N++ P G G+N ++ FV G
Sbjct: 30 ASQFAGPYVGFKLG--VNNSDASGAFNKASHNTVFP---GFTAGYNFDVQRFVVGAEAFA 84
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+TF + K G + + Y GF G
Sbjct: 85 DLHHGSTTFKD--------AGIDAKFGMPFNQFMPYIRAGFTG----------------- 119
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
D + G+G+DY +S A + + S + R N
Sbjct: 120 ------DDPDTRFHWGLGVDYKFAEHVSAVAEW------------TTDSSHHDGTKRTNN 161
Query: 231 AHIASLGINMHF 242
+ +G+ HF
Sbjct: 162 SFT--VGVQYHF 171
>gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 357
Score = 38.2 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 58/202 (28%), Gaps = 45/202 (22%)
Query: 58 YVGLHIS-RLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAA 113
Y G + Y+ + + G G LG+ Q + G
Sbjct: 29 YTGGKLGWSQYQNTGTGGIYGDQGNDGPTHKDQLGAGAFLGY--QANQY-LGFEM----- 80
Query: 114 KDDSTFYRLKEKYFIYGDVV------------LKAGYSVDSLL-IYGMGGFGGAYVIDSS 160
Y + GDV K Y + L +Y G S+
Sbjct: 81 -----GYDWLGRMPYKGDVRNGDFKAQGVQLAAKLSYPIAQDLDLYTRLGGMVWRADSSA 135
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
+ + N G S ++ +G +Y + + Y+++ +
Sbjct: 136 FDATTGARANNHDT-----GVSPLVALGAEYAWTKNWATRMEYQWVSNI----------G 180
Query: 221 DVERVDRKGNAHIASLGINMHF 242
D V + + + S+G++ F
Sbjct: 181 DKATVGARPDNGMLSVGVSYRF 202
>gi|317493466|ref|ZP_07951887.1| hypothetical protein HMPREF0864_02652 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918409|gb|EFV39747.1| hypothetical protein HMPREF0864_02652 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 210
Score = 38.2 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 59/196 (30%), Gaps = 20/196 (10%)
Query: 55 SGNYVGLHISRLYETH-----PLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINC 108
+G Y G + E ++ R T + G+ G+N Q E +
Sbjct: 27 TGYYAGAKLGTSLEQIHGQKSATGSSVPRDTKQAGTA---GLVFGYNFQNEFNLPIRAEL 83
Query: 109 HTTAAKDDSTFYRLKEKYF-IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE-S 166
+ T + +K + V L+ I F V
Sbjct: 84 DYSFRDTTDTDHFIKADNTRTHNRVRLQTAMLNGYYDINTDTAFTPYISAGIGYANVNLK 143
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
+ A +G + +G G+ Y +N + L Y+Y+ + S
Sbjct: 144 NTQGGASHSGNGDNFAWSVGTGVSYAINNHLDLDLGYKYLDAGDATAQAS---------K 194
Query: 227 RKGNAHIASLGINMHF 242
K H + G+N +F
Sbjct: 195 VKVATHDFTAGVNYYF 210
>gi|152999646|ref|YP_001365327.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|217974400|ref|YP_002359151.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|151364264|gb|ABS07264.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|217499535|gb|ACK47728.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 369
Score = 38.2 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 17/177 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + T N + P + G+ D+ D
Sbjct: 34 YVGAGLG--VNNYEHIATQNGQD----DPYAWDVFAGY--MFNDYFGAEIGFRDLGNADW 85
Query: 118 TFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + + G + G + + G + +S N+ A +
Sbjct: 86 TSAGISNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENS-------QNTAGASTK 138
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 139 YGSSDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRFG 195
>gi|283784188|ref|YP_003364053.1| outer membrane autotransporter [Citrobacter rodentium ICC168]
gi|282947642|emb|CBG87197.1| putative outer membrane autotransporter [Citrobacter rodentium
ICC168]
Length = 973
Score = 38.2 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 11/170 (6%)
Query: 58 YVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINCH 109
+V ++S + + L ++ Y S G G++LG++ +L D +G
Sbjct: 795 FVDGNLSYSHFNNDLTANMSNGQYVDGNTSADAWGFGLKLGYDWKLGDAGYLTPYGSVSG 854
Query: 110 TTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVESD 167
+ DD L+ Y + + G Y Y + + +D
Sbjct: 855 LFQSGDDYRLSNNLRVDGQSYDSIRYELGVDAGYTFTYSDDQAMTPYFKLAYVYDDANND 914
Query: 168 NSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
N +G GS+V +G+G + + S Y+ + S
Sbjct: 915 AHVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDVNYLGGGDVDQDWS 964
>gi|156739610|gb|ABU93465.1| Omp25 [Brucella neotomae]
Length = 63
Score = 38.2 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 11/73 (15%)
Query: 125 KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVV 184
K G + + GY ++ ++ Y G G+ + + N
Sbjct: 2 KQGFEGSLRARVGYDLNLVMPYLTAGIAGSQIKLN-----------NGLDDESKFRVGWT 50
Query: 185 LGIGLDYMVNYDI 197
G GL+ + +I
Sbjct: 51 AGAGLEAKLTDNI 63
>gi|153207688|ref|ZP_01946335.1| hypothetical protein A35_A1454 [Coxiella burnetii 'MSU Goat Q177']
gi|212219011|ref|YP_002305798.1| hypothetical protein CbuK_1487 [Coxiella burnetii CbuK_Q154]
gi|120576384|gb|EAX33008.1| hypothetical protein A35_A1454 [Coxiella burnetii 'MSU Goat Q177']
gi|212013273|gb|ACJ20653.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 263
Score = 38.2 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 142 SLLIYGMGGFGGAYVI--DSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
+YG G A + + + + S + + + + + V G+G+ + ISL
Sbjct: 153 RTHMYGKLGVSYAKLNQKLTVSQWMASLLQTSVQQKLNKNLWGYVAGLGIAEDLGRGISL 212
Query: 200 SASYRYIPHHIHSVNN------SNAKSDVERVDRKGNAHIASLGINMHF 242
A Y Y + + + S+ D+ A+ +G N+ F
Sbjct: 213 FAEYDYYDYGKNDLKTLRNIFPSSVLVDIYTQKVLVGAYTIRVGFNIEF 261
>gi|14278420|pdb|1G90|A Chain A, Nmr Solution Structure Of Outer Membrane Protein A
Transmembrane Domain: 10 Conformers
Length = 176
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 22/185 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + IN G G G+ Q+ +V G
Sbjct: 8 YTGAKLGFSQYHD--TGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDFLG--- 59
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
R+ K + G + + L Y + Y + +D N G+
Sbjct: 60 ---RMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVF-RADTKSNVYGKNH 115
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
G S V G++Y + +I+ Y++ + N +A + R D + SLG
Sbjct: 116 DTGVSPVFAGGVEYAITPEIATRLEYQF------TNNIGDAHTIGTRPDN----GMLSLG 165
Query: 238 INMHF 242
++ F
Sbjct: 166 VSYRF 170
>gi|255319613|ref|ZP_05360823.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262378987|ref|ZP_06072144.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303297|gb|EET82504.1| conserved hypothetical protein [Acinetobacter radioresistens SK82]
gi|262300272|gb|EEY88184.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 451
Score = 38.2 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 1/113 (0%)
Query: 131 DVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
K + G V +L E D + + FD L +G +
Sbjct: 265 AATAKINHKFADGAGVVTGRALLQEVRARNLTGKEGDKDRVPEPYFDETELGWGLAVGAN 324
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN-AHIASLGINMHF 242
+ ++L+A Y ++ + + + + + + N + SLG F
Sbjct: 325 FKPTDQLTLNADYSHVKGDDKFLLYTENRYTAKGDNIELNEFNAVSLGATYKF 377
>gi|124267096|ref|YP_001021100.1| hypothetical protein Mpe_A1907 [Methylibium petroleiphilum PM1]
gi|124259871|gb|ABM94865.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 462
Score = 38.2 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 24/169 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G + G + L+ P +T + +G I +Q +G D
Sbjct: 268 GEFNGFGFAGLHGKSPNFNTGYNTMAHLFEVDGYFIRGDWTVQ-GQLSYGQQKEGAVTPD 326
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVD---SLLIYG-------MGGFGGAYVIDSSLE--- 162
S YR YG V AGY++ L+ GG Y S ++
Sbjct: 327 ASGRYR---DARWYG-VSGLAGYAITPRLQGLVRADYLKNEKNGGGLYTYNGYSFIDENG 382
Query: 163 -KVESDNSKNA-----KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
V ++ +N G D + L +GL Y +N + +L A YR+
Sbjct: 383 LLVYGNDGRNGIGPDLAGDLDRGANRYALTVGLKYALNQNTTLKAEYRF 431
>gi|187478150|ref|YP_786174.1| adhesin/virulence factor [Bordetella avium 197N]
gi|115422736|emb|CAJ49264.1| putative adhesin/virulence factor [Bordetella avium 197N]
Length = 233
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Query: 141 DSLLIYGMGGFGGAYVIDS---SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDI 197
D +YG G G + + + + GR + LG+G Y + D+
Sbjct: 127 DKFSLYGSVGLGLTASRMKADFTQTSADEEPQHGSFGRRSQTLFTASLGVGASYALTKDM 186
Query: 198 SLSASYRYIPHHIHSVN--NSNAKSDVERVDRKGNAHIASLGINMHF 242
S+ YRYI + + AH SLG+ F
Sbjct: 187 SVDLGYRYIRMATAKTGALAEEGAEPGAHLHARPEAHEVSLGVRYRF 233
>gi|300021628|ref|YP_003754239.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC
51888]
gi|299523449|gb|ADJ21918.1| hypothetical protein Hden_0091 [Hyphomicrobium denitrificans ATCC
51888]
Length = 500
Score = 38.2 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 17/180 (9%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSL-------LPNGLGIELGHNIQLED-FVFG 105
WSG Y G + + +S + + G + Q+ D FV G
Sbjct: 42 WSGVYFGAGWGYGHNRSKNNYRDSSGDADSSSSRTEHADGGLVSLLYGADRQIGDRFVVG 101
Query: 106 INCHTTAA----KDDSTFYRLKEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGAYVIDSS 160
I + + L+ + +AG+ ++ LI+ G+ A+ +
Sbjct: 102 IFGDIDLSDITRGNRDEHNALEIDRAW--AIGARAGFLLNSRTLIFATAGYTQAHFDNDG 159
Query: 161 LEKVESDNS--KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
++ +S +GR +G G++ + + L RY N+ N
Sbjct: 160 WWDIDPPSSPGTTLRGRGSRTFGGYFVGGGVETRLTDNFFLRGEVRYSDFAGRVTNSGNF 219
>gi|299134298|ref|ZP_07027491.1| porin, opacity type [Afipia sp. 1NLS2]
gi|298591045|gb|EFI51247.1| porin, opacity type [Afipia sp. 1NLS2]
Length = 270
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 11/103 (10%), Positives = 28/103 (27%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ K ++ + G G G + + ++
Sbjct: 122 GTPGADNYNGYKSEWLFLTNAYADLGTWWCITPFVGAGIGAARVTLGGFNDHLDDGTLTG 181
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
+ L GL Y ++ + ++ +YRY+ +
Sbjct: 182 IASDASKWNFAWALHAGLAYKISPNWTMELAYRYVDMGNGATG 224
>gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 348
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 60/197 (30%), Gaps = 36/197 (18%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGL-------GIELGHNIQLEDFV-----FG 105
Y G + A N G G+ G+ Q+ ++ +
Sbjct: 29 YAGGKFGWSHYFDTSASQQTGANGNKYGDVGFDSDNVGGGVFTGY--QITPWLAVEGGYD 86
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
+ + + + + G + D+ +YG G G
Sbjct: 87 YLGNMQFNGKNGASGSQMKSQGLQLSLKASYGLT-DNWDLYGRAGAMGYRA--------- 136
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
++ RFD G V+ +G +Y N + + Y+++ +V N N ++
Sbjct: 137 -ESDIKGNNRFD-TGVRPVVAVGTEYAFNKNWAGRVEYQWV----SNVGNEN------QI 184
Query: 226 DRKGNAHIASLGINMHF 242
+ + G++ F
Sbjct: 185 GVSSDVSSVTAGLSYRF 201
>gi|315936245|gb|ADU55796.1| putative heme-binding phage-associated protein [Bartonella
henselae]
Length = 163
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 17/104 (16%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTY- 81
+ A D+ +P ++ W+G Y+G + + D N+K
Sbjct: 1 AQAADVIVPHEV--------APTVISAPAFSWTGFYIGGQVGNFSSKVEITD-PNKKDKL 51
Query: 82 ----NSLLPNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
++ P+G GI G N+ L + + G+ A +
Sbjct: 52 FSKDDTPKPSGFMGGIYAGSNMDLGNNMILGVETDAVWADREDA 95
>gi|84386628|ref|ZP_00989654.1| outer membrane protein P1 precursor [Vibrio splendidus 12B01]
gi|84378434|gb|EAP95291.1| outer membrane protein P1 precursor [Vibrio splendidus 12B01]
Length = 411
Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN--AHIASLGINMHF 242
+G G Y +N + L A Y YI +N S + V V + AH + N F
Sbjct: 353 IGAGATYALNKNWELRAYYDYIDLDEPELNYSKGQ--VINVQGAYDNSAHFFGMQANYRF 410
>gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103]
gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103]
Length = 367
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 28/193 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTA 112
Y G + + + N+ P G G G+ Q ++ G
Sbjct: 39 YTGAKLG--WSQYHDTGYYGNGYQNNDGPTHESQLGAGAFAGY--QANPYL-GFELGYDW 93
Query: 113 AK-DDSTFYRLKEKYFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
+ ++ + G + K Y + D L IY G +
Sbjct: 94 LGRMPNKGNQVNGAFKAQGIQLAAKLSYPIADDLDIYTRLGGMVWRADSTQQNLATGTRI 153
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
+ G S + +G++Y + + + Y+++ N +A++ V +
Sbjct: 154 SDHDT-----GVSPLAAVGVEYALTKNWATRLDYQWVN------NIGDAQT----VGARP 198
Query: 230 NAHIASLGINMHF 242
+ + SLG++ F
Sbjct: 199 DNGMLSLGVSYRF 211
>gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
Length = 360
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 24/198 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPN--------GLGIELGHNIQLEDFVFG 105
W+ + G+ + N TY GL E+G++ V G
Sbjct: 34 WASFHDGIEQLDAAKGGKYGINKNSVTYGVFGGYQILNQDKLGLATEVGYDY-FGR-VRG 91
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKV 164
K D +R + LK Y V +L +YG G +
Sbjct: 92 TEKPND--KADKQTFRHAAHG---ATIALKPSYEVLPNLDVYGKAGIALVNNTYKTF--- 143
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
N+ K + SS++LG G++Y + +++ Y+++ + + + +
Sbjct: 144 ---NAAQEKVKSRRFQSSLILGAGVEYAILPELAARIEYQWLNNAGKASYSKLNRRG--A 198
Query: 225 VDRKGNAHIASLGINMHF 242
D + + S G++ F
Sbjct: 199 TDYRPDISSVSAGLSYRF 216
>gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
Length = 350
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 34/193 (17%)
Query: 58 YVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK- 114
Y G + ++N G G G+ Q+ + G
Sbjct: 29 YAGGKLGWSQFHDTGWYNSSLNNNGPTHESQLGAGAFGGY--QVNPY-LGFEMGYDWLGR 85
Query: 115 ----DDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNS 169
D K + + K GY + D L IY G G + DSS ++
Sbjct: 86 MPYKGDQVNGAFKAQGV---QLTAKLGYPITDDLDIYTRLG-GMVWRADSSNSIAGDNHD 141
Query: 170 KNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG 229
G S V G+++ V DI+ Y+++ N +A + V +
Sbjct: 142 T---------GVSPVFAGGVEWAVTRDIATRLEYQWVN------NIGDAGT----VGVRP 182
Query: 230 NAHIASLGINMHF 242
+ + S+G++ F
Sbjct: 183 DNGMLSVGVSYRF 195
>gi|307721661|ref|YP_003892801.1| hypothetical protein Saut_1745 [Sulfurimonas autotrophica DSM
16294]
gi|306979754|gb|ADN09789.1| conserved hypothetical protein [Sulfurimonas autotrophica DSM
16294]
Length = 206
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 57/185 (30%), Gaps = 19/185 (10%)
Query: 24 LAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNS 83
L+ L+ D + + ++E + E G GL T DT
Sbjct: 15 LSTTLFAAEVSDEQDASRAHIEAKHHEEGNLYIVAKGLISLGDTYTEEATDTEPEAILKG 74
Query: 84 LLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG---YSV 140
G GI+LG+ + F + T + G+ +AG YS
Sbjct: 75 DTGQGFGIDLGYRLGYG---FATEFDFSYTHTTVTKSVI-------GEEDRRAGADYYSY 124
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS--SVVLGIGLDYMVNYDIS 198
L+YG K + K F +G+ GL+Y ++ +
Sbjct: 125 GIDLLYG----YHVNEEIVLFAKAGWEIEKEKISDFGINGTNDGFSYAAGLEYGLSAHWA 180
Query: 199 LSASY 203
L Y
Sbjct: 181 LVGEY 185
>gi|300718309|ref|YP_003743112.1| autotransporter/pertactin [Erwinia billingiae Eb661]
gi|299064145|emb|CAX61265.1| putative autotransporter/pertactin [Erwinia billingiae Eb661]
Length = 579
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 83 SLLPNGLGIELGHNIQ-----LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG 137
S GLG+++G+ + +E +V A T + Y + + G
Sbjct: 431 SGNGYGLGMKVGYTWEDNGLFVEPYVKATGRAFYGAHYTLTNGMVVNGND-YKSLQGELG 489
Query: 138 YSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK--NAKGRFDGHGSSVVLGIGLDYMVNY 195
V G G + E +++ ++ NA G+++ LG+G + V
Sbjct: 490 ADVGYTFEMGAGHLKPYLHLAGINEFADNNKTRVNNATLNNSIDGAAIQLGLGAEMKVTD 549
Query: 196 DISLSASYRYIPHHIH 211
+ +Y Y H
Sbjct: 550 NFGGYVAYDYTKGHDS 565
>gi|29653658|ref|NP_819350.1| OmpA-like transmembrane domain-containing protein [Coxiella
burnetii RSA 493]
gi|161831470|ref|YP_001596256.1| outer membrane protein [Coxiella burnetii RSA 331]
gi|29540920|gb|AAO89864.1| outer membrane protein [Coxiella burnetii RSA 493]
gi|161763337|gb|ABX78979.1| outer membrane protein [Coxiella burnetii RSA 331]
Length = 231
Score = 37.9 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 64/210 (30%), Gaps = 29/210 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTI-------NRKTYNSLLPNG---LGIELGHNIQL 99
++G Y+ ++ Y T R +S NG G +LG+
Sbjct: 32 PAPSYAGVYLEGNLGYAYRPWRKDATTVVGLAKQARLLGSSSRGNGGFTFGADLGYQFNQ 91
Query: 100 -----EDFVF--GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+ + + TT + K + + ++ ++G G
Sbjct: 92 YFAVEGGWFYLPKVKFTTTGVVNGLAAGTYTVKSGMAYAALKGMAPVYENTYVFGKLGVA 151
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
Y ++ + R G+ Y + S++A Y ++P + +
Sbjct: 152 YTY-NRANAGLPTNKIPATFGSRSRFWNPLF--AAGVQYYFTPNWSVNAQYTFVPGY-RN 207
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + V H+ ++G+ F
Sbjct: 208 ASSKRFVAPVT--------HLFTVGLGYKF 229
>gi|157147028|ref|YP_001454347.1| hypothetical protein CKO_02805 [Citrobacter koseri ATCC BAA-895]
gi|157084233|gb|ABV13911.1| hypothetical protein CKO_02805 [Citrobacter koseri ATCC BAA-895]
Length = 973
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 11/170 (6%)
Query: 58 YVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINCH 109
+V +S + + L+ ++ Y S G G++LG++ +L D +G
Sbjct: 795 FVDGSLSYSHFNNDLSANMSNGQYVDGNTSADAWGFGLKLGYDWKLGDAGYVTPYGSVSG 854
Query: 110 TTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVESD 167
+ DD +K Y + + G Y Y + + +D
Sbjct: 855 LFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDANND 914
Query: 168 NSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
N +G GS+V +G+G + + S Y+ + S
Sbjct: 915 ADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 964
>gi|160874266|ref|YP_001553582.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859788|gb|ABX48322.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315266500|gb|ADT93353.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 369
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 50/177 (28%), Gaps = 17/177 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + T N + P + G+ D+ D
Sbjct: 34 YVGAGLG--VNNYEHIATQNGQD----DPYAWDVFAGY--MFNDYFGAEIGFRDLGNADW 85
Query: 118 TFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + G + G + + G + +S + S +
Sbjct: 86 TNGATSNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENSQNNGITS-------SK 138
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 139 YSTNDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRFG 195
>gi|126668019|ref|ZP_01738983.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17]
gi|126627529|gb|EAZ98162.1| hypothetical protein MELB17_09768 [Marinobacter sp. ELB17]
Length = 211
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 50/175 (28%), Gaps = 6/175 (3%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
+G Y+G T + + + NS G+ ++ + +
Sbjct: 20 PMASAAPTVTATGFYLGAQTGWNDTTLEGSSSNSLVEGNSASGVSGAAFAGYQAKIPNGI 79
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGD----VVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
I + A+ + + I D + + G + + G G D
Sbjct: 80 LAIEVNAGASSAEFEKTETAARQLITSDMSYGISARLGTDIARSTQF--YGLVGYQSTDF 137
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
L +S A + + +G G+ + +++ + H +
Sbjct: 138 ELTLEDSTPGSVANFKDSKSSAGASIGFGIQAQITDALAMRVQWTRTLHDEKTFG 192
>gi|323969553|gb|EGB64842.1| outer membrane insertion protein [Escherichia coli TA007]
Length = 249
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
SD S +D + + LG+G+ Y V D SL +YRY+ ++ + + +
Sbjct: 175 SDASSLHYSGYD-NNFAWSLGVGVKYEVTPDFSLDLAYRYLDAGDSTLTYEDGQDTYK 231
>gi|304412567|ref|ZP_07394172.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307303583|ref|ZP_07583336.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304349043|gb|EFM13456.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306912481|gb|EFN42904.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 369
Score = 37.9 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 50/177 (28%), Gaps = 17/177 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + T N + P + G+ D+ D
Sbjct: 34 YVGAGLG--VNNYEHIATQNGQD----DPYAWDVFAGY--MFNDYFGAEIGFRDLGNADW 85
Query: 118 TFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + G + G + + G + +S + S +
Sbjct: 86 TNGATSNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENSQNNGITS-------SK 138
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 139 YSTNDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRFG 195
>gi|213865487|ref|ZP_03387606.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 233
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 89 LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYG 147
+G E+G++ L + K D+T K + + K GY + D L +Y
Sbjct: 10 VGFEMGYDW-LGRMPY---------KGDNTNGAYKAQGV---QLTAKLGYPITDDLDVYT 56
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G +S+ A + G S V G++Y + +I+ Y++
Sbjct: 57 RLG------GMVWRADTKSNVPGGASTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW-- 108
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ N +A + R D + S+G++ F
Sbjct: 109 ----TNNIGDANTIGTRPDN----GLLSVGVSYRF 135
>gi|225873020|ref|YP_002754479.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791412|gb|ACO31502.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 446
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 43/161 (26%), Gaps = 10/161 (6%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGINCHTTAAKDDSTFYRL 122
L + + G I D+ I T +
Sbjct: 35 PRYDLALGYNYIGANAPPGNCHCFAMHGGFFSAGIHFNDW-LSIEGKVTGGHSNDISALG 93
Query: 123 KEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+ V + + YG FG A+ S + ++ +A +
Sbjct: 94 QNLTLTTFTVGPRFTWHHGRFAPYGEALFGAAWGTGSYFPRANGTSTTSAS------SVA 147
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+G GL+Y + +++ H + ++ +E
Sbjct: 148 YSVGGGLEYELTPRMAVLLPDAEFLHTALPNGINGEQNTLE 188
>gi|329755842|gb|AEC04318.1| outer membrane protein A [Pasteurella multocida]
gi|329755852|gb|AEC04323.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 17/197 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+ + GL+ ++ + + T K + G+ G+ I V A
Sbjct: 36 WASFHDGLNQAKDLSSAANSGTFGFKRNSVT----YGVFGGYQITDNFAVELGYDDFGRA 91
Query: 114 KDDSTFYRLKE----KYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
K + LK K+ +G + LKA Y V L +Y G + +
Sbjct: 92 KLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYNDAKGE 151
Query: 168 --NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
R S V GL+Y +++L Y+++ + + ERV
Sbjct: 152 PVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG-----ERV 206
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 207 DYRPDIGSVTAGLSYRF 223
>gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565]
gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 345
Score = 37.9 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 27/156 (17%)
Query: 54 WSGNYVGLHISRLYE-THPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTT 111
WS Y G+ S + D + + N LG+ELG++ L ++ +
Sbjct: 35 WSNFY-GIDESNALTLGNETNDALGAGVFGGYQINKNLGLELGYDY-LGNYKYDATTAAG 92
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
A D+ + LK G+ V D+L +YG G G + S +
Sbjct: 93 AFSDEVKAQ--------LAQLTLKLGFPVTDNLDLYGRVGGGYGWADTKSDVYKDD---- 140
Query: 171 NAKGRFDGHGSSVVLGI-GLDYMVNYDISLSASYRY 205
V++G G +Y N D + Y+Y
Sbjct: 141 ---------SRFVMVGALGAEYAFNLDWAARLEYQY 167
>gi|329755840|gb|AEC04317.1| outer membrane protein A [Pasteurella multocida]
gi|329755846|gb|AEC04320.1| outer membrane protein A [Pasteurella multocida]
gi|329755854|gb|AEC04324.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 17/197 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+ + GL+ ++ + + T K + G+ G+ I V A
Sbjct: 36 WASFHDGLNQAKDLSSAANSGTFGFKRNSVT----YGVFGGYQITDNFAVELGYDDFGRA 91
Query: 114 KDDSTFYRLKE----KYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
K + LK K+ +G + LKA Y V L +Y G + +
Sbjct: 92 KLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYNDAKGE 151
Query: 168 --NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
R S V GL+Y +++L Y+++ + + ERV
Sbjct: 152 PVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG-----ERV 206
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 207 DYRPDIGSVTAGLSYRF 223
>gi|329755832|gb|AEC04313.1| outer membrane protein A [Pasteurella multocida]
gi|329755834|gb|AEC04314.1| outer membrane protein A [Pasteurella multocida]
gi|329755836|gb|AEC04315.1| outer membrane protein A [Pasteurella multocida]
gi|329755838|gb|AEC04316.1| outer membrane protein A [Pasteurella multocida]
gi|329755844|gb|AEC04319.1| outer membrane protein A [Pasteurella multocida]
gi|329755850|gb|AEC04322.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 17/197 (8%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+ + GL+ ++ + + T K + G+ G+ I V A
Sbjct: 36 WASFHDGLNQAKDLSSAANSGTFGFKRNSVT----YGVFGGYQITDNFAVELGYDDFGRA 91
Query: 114 KDDSTFYRLKE----KYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESD 167
K + LK K+ +G + LKA Y V L +Y G + +
Sbjct: 92 KLRHSLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYNDAKGE 151
Query: 168 --NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
R S V GL+Y +++L Y+++ + + ERV
Sbjct: 152 PVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG-----ERV 206
Query: 226 DRKGNAHIASLGINMHF 242
D + + + G++ F
Sbjct: 207 DYRPDIGSVTAGLSYRF 223
>gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii]
Length = 238
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 132 VVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K GY + D L IY +GG ++ + D G S V G+
Sbjct: 1 LTAKLGYPITDDLDIYTRLGGMVWRADAKNNEGFKDHDT-----------GVSPVFAGGV 49
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + +I+ Y++ + N +A + V + + + S+G++ F
Sbjct: 50 EYAITPEIATRLEYQW------TNNIGDANT----VGGRPDNGLLSVGVSYRF 92
>gi|254511664|ref|ZP_05123731.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11]
gi|221535375|gb|EEE38363.1| outer membrane protein, putative [Rhodobacteraceae bacterium KLH11]
Length = 172
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 49/179 (27%), Gaps = 29/179 (16%)
Query: 53 IWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA 112
W+G YVG + ++ L +G++ +FV G
Sbjct: 23 DWTGAYVGFSFGYADVDGSGGAGGSDGSFGPL--------IGYDYDFGNFVLGGELEYNR 74
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D + + L+ GY L Y + G A +S
Sbjct: 75 LNLD--LGASEGSLDSMSRLKLRGGYDFGPALGYVVVGTARASTSGNS------------ 120
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
++ V GIG+ Y + +S + + ++V +
Sbjct: 121 -------DTAAVYGIGVAYPLGDRFVISGEALRQDFENVPRSGGDLDANVFNLRTTFRF 172
>gi|262394317|ref|YP_003286171.1| hypothetical protein VEA_003546 [Vibrio sp. Ex25]
gi|262337911|gb|ACY51706.1| hypothetical protein VEA_003546 [Vibrio sp. Ex25]
Length = 171
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 55/178 (30%), Gaps = 29/178 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G I + T +LP +GIE G+ ++ +A D
Sbjct: 23 IYAGGQIGQSDIDSENDTTYGIHVGTGILPF-IGIEAGY-FNHGKVDLSLSGSRGSADFD 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
S + K L +Y GG V+ D +
Sbjct: 81 SFYLAAKPSID------------FGPLHVYAKGGINAFN--------VDYDGGLRNLDKD 120
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
DG S + G+G +Y + ++S+ ASY+ V+ + V V H
Sbjct: 121 DG--VSYMYGVGAEYFLLDNVSIGASYQAFG-----VDIDSDSDTVSSVTGNITFHFL 171
>gi|49182356|gb|AAT57680.1| OmpA [Pasteurella multocida]
Length = 353
Score = 37.5 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 24/198 (12%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGI------N 107
W+ + GL+ + AD NS+ G+ G+ I ++F +
Sbjct: 36 WASFHDGLN---QAKYLEDADATFGLKRNSVT---YGVFGGYQI-TDNFAVELGYDDFGR 88
Query: 108 CHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
A+ D + + + LKA Y V D L +Y G + +
Sbjct: 89 AKLRIAETDQKARDVAKHTNHGAHLSLKASYPVLDGLDVYARVGAALIRSDYKVYDHSDP 148
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHSVNNSNAKSDVER 224
K S V GL+Y +++L Y+++ + V+ + R
Sbjct: 149 AKLPQLKRTHS-TQVSPVFAGGLEYAFMPELALRVEYQWVNNVGKLKDVDGN-------R 200
Query: 225 VDRKGNAHIASLGINMHF 242
VD + + + G++ F
Sbjct: 201 VDYRPDIGSVTAGLSYRF 218
>gi|323139359|ref|ZP_08074411.1| putative transcriptional regulator, XRE family [Methylocystis sp.
ATCC 49242]
gi|322395425|gb|EFX97974.1| putative transcriptional regulator, XRE family [Methylocystis sp.
ATCC 49242]
Length = 133
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
P + R T + G G+ G++ + VFG A + ++
Sbjct: 37 PTNGVLARHTSHGGSFTG-GVLAGYDWHVGPVVFGPRGDPLGAHAVNAGMEPAKRKMRSR 95
Query: 131 DVVLKAGYSVDSLLIYGMGGFGG 153
D+ + G + ++ + G G
Sbjct: 96 DLAAQIGIAEQNVSLLKSGKVKG 118
>gi|255536293|ref|YP_003096664.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium
3519-10]
gi|255342489|gb|ACU08602.1| Thrombospondin type 3 repeat:OmpA/MotB [Flavobacteriaceae bacterium
3519-10]
Length = 477
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 30/98 (30%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
++G G G + K D G GL Y VN I L
Sbjct: 164 LHGYAGIGSIGYRAYVEDAAGQRLVTEVKPSLDKWSLFGQAGAGLKYKVNRRIDLEGRLM 223
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ S + + + N A+LG+++
Sbjct: 224 YVVTTDDSFDGGAGQYNAREEQVSDNFMNATLGLSLKL 261
>gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
Length = 389
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 40/248 (16%), Positives = 73/248 (29%), Gaps = 39/248 (15%)
Query: 2 NFNGYGALFFVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGL 61
N +G ++ + + +LAV L + DN W Y G
Sbjct: 26 NVSGSLPIWMITRRKMKNTAIALAVALAGFATLAQAAPRDNT----------W---YAGA 72
Query: 62 HISRLYETHPLADTINRKTYNSLLPN---GLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+ L + + + G G LG+ Q+ + G+
Sbjct: 73 KVGWSGYHDTLMNHTYKGVGDGSTRKDQLGAGAFLGY--QINQY-LGLEMGYDW------ 123
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL----EKVESDNSKNAKG 174
F R+ + G + + L Y + Y + + + K
Sbjct: 124 FGRMHYSGDVKNGAFKAHGVQLAAKLSYPVLEDLDVYTRLGGMLWRADSTGNLGDPRKKI 183
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
R G S V +GL+Y + + Y+++ N + + R D
Sbjct: 184 RDYDIGVSPVAAVGLEYALTQNWVTRLDYQFVN------NMGDEATLGTRPDNTN----L 233
Query: 235 SLGINMHF 242
SLG+ F
Sbjct: 234 SLGVAYRF 241
>gi|269964179|ref|ZP_06178474.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831083|gb|EEZ85247.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 204
Score = 37.5 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 62/197 (31%), Gaps = 21/197 (10%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSL-------LPNGLGIELGHNIQLEDFVFGIN 107
+ Y+G I + + +S+ I G+ + ++ I+
Sbjct: 20 AAPYIGASIGQASFGDVNSSVSAGGNNSSMKLKLEDDSSLSGKIFGGY--KFNEY---IS 74
Query: 108 CHTTAAKDDSTFYRLKEKYFI-YGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVE 165
D+ ++ + + + KA + D ++ G V
Sbjct: 75 LEGAIGGYDALDGKVATVGDMKFLAIQPKATLPIGDHFNLFAKAGLSYFNAELKVSNSVI 134
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
N + S + G+G ++ + + +L + Y+ + N K+ V+
Sbjct: 135 --NGSSGHTTLSDSTVSGMYGLGAEFAIAKNFALQIEWEYMRPELEIAKAGNDKATVD-- 190
Query: 226 DRKGNAHIASLGINMHF 242
+ S+G+N F
Sbjct: 191 ---AEISVFSVGMNYRF 204
>gi|195940407|ref|ZP_03085789.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4024]
Length = 267
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N G+ G S V G++Y + +I+ Y++ + N +A + R
Sbjct: 46 ADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRP 99
Query: 226 DRKGNAHIASLGINMHF 242
D + SLG++ F
Sbjct: 100 DN----GMLSLGVSYRF 112
>gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222]
gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222]
Length = 353
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 44/177 (24%), Gaps = 22/177 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + D G+ G+N + F + D
Sbjct: 28 YVGAKVGMGWLDSACVD----GVKCEDDSVAGGLYGGYNFSDK---FALELSADYLGDYD 80
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
T + Y D ++ S + + D
Sbjct: 81 TSFNSTGTLKQYSDSIVAISLS------------PMYRLAIQQKFDIFFKAGPAYIMHDD 128
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYI-PHHIHSVNNSNAKSDVERVDRKGNAHI 233
+ LGIG + D +L Y+Y V + S++ V N
Sbjct: 129 EDDVVLSLGIGAEKQFAEDWALRVEYQYFDDFDDKFV--QDLNSNLVTVGLSYNFGT 183
>gi|126173289|ref|YP_001049438.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125996494|gb|ABN60569.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 363
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 50/177 (28%), Gaps = 17/177 (9%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + + T N + P + G+ D+ D
Sbjct: 28 YVGAGLG--VNNYEHIATQNGQD----DPYAWDVFAGY--MFNDYFGAEIGFRDLGNADW 79
Query: 118 TFYRLKEKYFIYGDVVLKAGY--SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T + G + G + + G + +S + S +
Sbjct: 80 TNGATSNDAGVKGSTLGLVGIWPLANRWSLSAEAGAMYYSLENSQNNGITS-------SK 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
+ + + LG G+ Y ++ L A YR + N A S+ ++
Sbjct: 133 YSTNDFAPYLGAGVGYNFTDNLKLQAKYRRYENLNDDYNIVEADSNYWGLELSYRFG 189
>gi|207855855|ref|YP_002242506.1| autotransporter/virulence factor [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|206707658|emb|CAR31942.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
Length = 1004
Score = 37.5 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 825 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 884
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 885 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 944
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 945 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 995
>gi|307262353|ref|ZP_07543999.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306867901|gb|EFM99731.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 334
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 28/202 (13%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTT 111
W+ + G+ A +R T + N + G+ G+ I L G+
Sbjct: 34 WASFHDGIE------QLDSAKNTDRGTKYGINRNSVTYGVFGGYQI-LNQDKLGLAAELG 86
Query: 112 ------AAKDDSTFYRLKEKYFIYG----DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSS 160
+ + +K F + + LK Y V L +YG G +
Sbjct: 87 YDYFGRVRGSEKPNGKADKKTFRHAAHGATIALKPSYEVLPDLDVYGKVGIALVNNTYKT 146
Query: 161 LEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKS 220
N+ K + SS++LG G++Y + +++ Y+++ + + + + +
Sbjct: 147 F------NAAQEKVKTRRFQSSLILGAGVEYAILPELAARVEYQWLNNAGKA--SYSTLN 198
Query: 221 DVERVDRKGNAHIASLGINMHF 242
+ D + + S G++ F
Sbjct: 199 RMGATDYRSDISSVSAGLSYRF 220
>gi|168232336|ref|ZP_02657394.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469978|ref|ZP_03075962.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456342|gb|EDX45181.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205333390|gb|EDZ20154.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 1004
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 825 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 884
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 885 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 944
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 945 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 995
>gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 339
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 38/187 (20%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y GL + T ++ +++ N G G+ LG+N D+ F + T +
Sbjct: 28 YTGLRLGATDYTD--YKISGGESSSAIDANIGGGLFLGYN--FVDW-FALEGGYTYLGEL 82
Query: 117 STFYRLKE-KYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
T ++ + G L+A D+L ++ G G S +
Sbjct: 83 ETSEKITNHALELVGKFTLQA---TDNLDLFVKAGAFGYKTDADSANDDGFNA------- 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G G +Y N ++S Y+Y ++ + K +AH+ +
Sbjct: 133 --------TAGFGAEYFFNDNVSTRLEYQYYN-------------NLTLDEAKWDAHLLA 171
Query: 236 LGINMHF 242
+ + ++
Sbjct: 172 VSLVYNW 178
>gi|257465129|ref|ZP_05629500.1| pertactin precursor [Actinobacillus minor 202]
gi|257450789|gb|EEV24832.1| pertactin precursor [Actinobacillus minor 202]
Length = 811
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 5/129 (3%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
T +D+ + + LG + NI+L FV + S+ +
Sbjct: 578 STRTASDSHSSGFEQDIHSVQLGADAALTDNIRLGGFVGNARSDVDFDGEYSSGKVKTQS 637
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
IYG + G+ D++ Y + + + K + GR G
Sbjct: 638 LGIYGTYLANNGFYWDNVAKYE---YVKSESASTGKRKYNAYTLSTEIGRIHQLGQGWTA 694
Query: 186 GIGLDYMVN 194
+
Sbjct: 695 TPQIQAAWT 703
>gi|6735516|emb|CAB69081.1| outer membrane protein [Pseudomonas putida]
Length = 230
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 12/174 (6%)
Query: 73 ADTINRKTYNSLLPNGLGIELGHNIQLE---DFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
T+ + + ++ + I DF GI + S + Y
Sbjct: 65 GATVPNAAVSIGNDTTVSFDISYFISNNVALDFFVGIPAKAKFQGEKSISALGRVSEVDY 124
Query: 130 GDVVLKAGYSVDSL-LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
G +L Y D+ +Y G G V ++D + + D +V +G
Sbjct: 125 GPAILSLQYHFDNFERLYPYVGLGVGRV----FFFDKTDGALTSFDIKDKWAPAVQVG-- 178
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L Y L++ RYIP V+ + + V + + I SLG + F
Sbjct: 179 LRYDFGNSWMLNSDVRYIPFK-TDVSGTLGAAPVS-TKIEIDPFILSLGASYKF 230
>gi|254435640|ref|ZP_05049147.1| hypothetical protein NOC27_2703 [Nitrosococcus oceani AFC27]
gi|207088751|gb|EDZ66023.1| hypothetical protein NOC27_2703 [Nitrosococcus oceani AFC27]
Length = 414
Score = 37.5 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 15/170 (8%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G S T P A + R S P+ +G LG ++ + +GI K +
Sbjct: 38 LGFENSFYNYTKPDAVSDVRLESPSEEPH-IGATLGADL--GRY-WGIEFAYDYIKTNLL 93
Query: 119 FYRLKEKYF-----IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K+ G + + D L+ Y + G G S E +
Sbjct: 94 QTSGKKAGDYATTTWLGQLRFRYPLLQDRLVPYLLAGGGIGIGEFSGREDFSFTGGGSDT 153
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
V+G G +Y + +I+L +Y ++ S + ++
Sbjct: 154 VPLG------VVGGGAEYFITDNIALGVEAKYYFGFHPEISISTEERELT 197
>gi|329755864|gb|AEC04329.1| outer membrane protein A [Pasteurella multocida]
Length = 351
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 39/200 (19%), Positives = 65/200 (32%), Gaps = 25/200 (12%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNG-----LGIELGHNI------QLEDFVFG 105
YVG L + ++ G+ G+ I +L FG
Sbjct: 28 FYVGAKAGWASFHDGLNQFKDLNDEDATFGFKRNSVTYGVFGGYQITDTFAVELGYDDFG 87
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKV 164
A+ D L + + LKA Y V D L +Y GA ++ S +
Sbjct: 88 -RAKLRVAEKDQKARDLAKHTNHGAHLSLKASYPVLDGLDVYAR---VGAALVRSDYKLY 143
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHSVNNSNAKSDV 222
R S V GL+Y +++L Y+++ + N
Sbjct: 144 GESEDLEEFKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDANG------- 196
Query: 223 ERVDRKGNAHIASLGINMHF 242
ERVD + + + G++ F
Sbjct: 197 ERVDYRPDIGSVTAGLSYRF 216
>gi|312960284|ref|ZP_07774795.1| TonB-dependent receptor [Pseudomonas fluorescens WH6]
gi|311285506|gb|EFQ64076.1| TonB-dependent receptor [Pseudomonas fluorescens WH6]
Length = 601
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 3/139 (2%)
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ D + ++ ++G L+ YS D+ + G G + ++ ++
Sbjct: 311 YSNRLDFDQTADANDVILRRQDGNLFGQ-ELRLNYSADT--VKGFVGPYYGHNTNTFHDR 367
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ DN A + D + L +++ +L RY + + SD
Sbjct: 368 LLFDNVLAATVKGDTTIENKALFGEVNWTFAPRWTLVTGLRYDHETNDTDIKQDDLSDAA 427
Query: 224 RVDRKGNAHIASLGINMHF 242
+V++ A + LGIN
Sbjct: 428 KVNKSFAAVLPKLGINYEL 446
>gi|293604160|ref|ZP_06686568.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292817385|gb|EFF76458.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 919
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 91 IELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSV------DSLL 144
++ G++ Q F + + T D RLK +G L+ G S D L+
Sbjct: 768 VQAGYSWQDMPAKFWLRDNATGEDGDKVSGRLKRDQA-FGAGELRVGRSYRVDALSDRLV 826
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
+ G ++ + + + + + G+GSS LG G + V Y
Sbjct: 827 FFPYAVVGADWLWNKNRANANFGDQSYSVDQL-GNGSSWSLGAGPGFNVRY 876
>gi|294789631|ref|ZP_06754865.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
gi|294482432|gb|EFG30125.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
Length = 185
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 70/223 (31%), Gaps = 48/223 (21%)
Query: 12 VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHP 71
V LS ++P ++A D + +G VG +I
Sbjct: 7 VFILSTLIPAAAMAADTF-------------------------TGASVGTNIETTKYKIK 41
Query: 72 LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGD 131
T N++L +G ++G + V + K D+
Sbjct: 42 -NSISGENTRNAVLKGDVGFDMG-----NNLVGAVEAKANLNKSDAFDTN---------- 85
Query: 132 VVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
G + Y +G G V + +++ + D + +G+G Y
Sbjct: 86 -----GVKISQKDKYSIGYQQGYRVTKDLMPYAKAEYINSKFD--DARANGYGVGMGAKY 138
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
V ++ L A Y + + + + SD++ +A +A
Sbjct: 139 AVTDNVELGAEYVHSRLKGSRLKGNGSASDLKLRGNTVSAGVA 181
>gi|240950190|ref|ZP_04754477.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305]
gi|240295277|gb|EER46063.1| hypothetical protein AM305_03048 [Actinobacillus minor NM305]
Length = 205
Score = 37.1 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 16/169 (9%)
Query: 54 WSGNYVGL-------HISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFG 105
++G Y+G S Y + + +G+ G+ + +FV
Sbjct: 24 FTGGYLGGTITSVKQEFSVPYSELGYQTYEGKYIADGSRGTRVGVTAGYGFDIGSNFVGQ 83
Query: 106 INCHTTAAKDDSTF--YRLKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLE 162
+ + +T + K + GY V + L Y A V SS +
Sbjct: 84 LEGELAFSNTKTTNKLGEIITKERFATNASAILGYRVLGNFLPYVK-----ASVNASSFD 138
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIH 211
ES + G GL Y V + L Y+ + +
Sbjct: 139 FNESATGFERVDFENSAAFGFGFGAGLKYAVTEKLDLGVEYQKVTLKGN 187
>gi|239950059|gb|ACS36761.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 268
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 55/164 (33%), Gaps = 19/164 (11%)
Query: 94 GHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAG--YSVDSLLIYGMGGF 151
G+ I +G+ + ++ Y +G V K +
Sbjct: 6 GYGINRNSVTYGVFGGYQIIDN----LTVELGYDYFGRVRGKEQEFRAFKHSAHGTHLSL 61
Query: 152 GGAYVIDSSLEKVESDNSKNAKGRFDGH---------GSSVVLGIGLDYMVNYDISLSAS 202
+Y + + L+ + + + + +S++LG G++Y + ++
Sbjct: 62 KPSYEVLNGLDVYGKVGAALVRNDYKFYDTEDKAHNLKTSLLLGAGVEYAILPKLAFRVE 121
Query: 203 YRYIPHHIHSVNNSNAKSDVE----RVDRKGNAHIASLGINMHF 242
Y+++ ++ + + D +AH S GI+ F
Sbjct: 122 YQWLSRVGNANKAAQKRGDTAMFGPGSTYSPDAHSVSAGISYRF 165
>gi|325286698|ref|YP_004262488.1| TonB-dependent receptor plug [Cellulophaga lytica DSM 7489]
gi|324322152|gb|ADY29617.1| TonB-dependent receptor plug [Cellulophaga lytica DSM 7489]
Length = 1055
Score = 37.1 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 4/115 (3%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLE-DFVFGINCHTTAAKDDSTFYRLKEKYF 127
T+ + + G +ELG N Q+ +F + I + T AK++ F
Sbjct: 766 PDAAGLTLPAENIGKVDNFGWELELGWNQQVNDNFSYNIGGNVTKAKNEVVFLAEASDVP 825
Query: 128 IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSS 182
+ + GYS+DS + Y G + + + D G+
Sbjct: 826 EW---RKREGYSIDSYITYPTAGIFRDQAQVDATDVKLGGTVEGEPIYLDTDGNG 877
>gi|326346124|gb|EGD69862.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1044]
Length = 273
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N G+ G S V G++Y + +I+ Y++ + N +A + R
Sbjct: 52 ADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRP 105
Query: 226 DRKGNAHIASLGINMHF 242
D + SLG++ F
Sbjct: 106 DN----GMLSLGVSYRF 118
>gi|119472715|ref|ZP_01614680.1| putative TonB-dependent receptor [Alteromonadales bacterium TW-7]
gi|119444791|gb|EAW26094.1| putative TonB-dependent receptor [Alteromonadales bacterium TW-7]
Length = 1010
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 55/150 (36%), Gaps = 5/150 (3%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLL-PNGLGIELGHNIQLEDFVF--GINCHTTA 112
G V L I+ ++ + +T S NG+G++ G+N DF F + T
Sbjct: 826 GETVSLPITNSVTNDEESEILGLETSFSYRWDNGIGVKFGYNYADTDFEFEDSLYGDTFV 885
Query: 113 AKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNA 172
D +LKE G V + + S L Y +GGF A + E + S
Sbjct: 886 TDVDGNTTQLKEGIVEPGSVPGFSKHVFSSQLYYQIGGFDTAVIYKYRSEYFQPYTSNGT 945
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ R+ + Y +N + A
Sbjct: 946 RLRYVDSVGVWEMRA--SYKINKHFRVKAE 973
>gi|229592859|ref|YP_002874978.1| putative ABC transporter outer membrane exported protein
[Pseudomonas fluorescens SBW25]
gi|229364725|emb|CAY52696.1| putative ABC transport system, outer membrane exported protein
[Pseudomonas fluorescens SBW25]
Length = 232
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 19/166 (11%)
Query: 96 NIQLE-DFVFGINCHTTAAKDDST--FYRLKEKYFIYGDVVLKAG-------------YS 139
+ QL +F + + H +T + +K K G K G Y
Sbjct: 67 DTQLGLNFAYMLTNHVGIELLAATPFEHDVKIKNTALGAANGKLGTLKHLPPTLSVVYYP 126
Query: 140 VDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG-HGSSVVLGIGLDYMVNYDIS 198
+D+ + G E V S S F + IG DYM+N
Sbjct: 127 LDNKSAFQPYVGAGINYTWIYDEHVGSRASDAGFSNFKAENSWGWAAQIGADYMINDKWM 186
Query: 199 LSASYRYIPHHIHSV--NNSNAKSDVERVDRKGNAHIASLGINMHF 242
++A RYI + NN+ + +V+ + + +GI F
Sbjct: 187 INAQARYIDISTKATVDNNALGQGTRAKVNVDVDPMVYMVGIGYKF 232
>gi|62178984|ref|YP_215401.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62126617|gb|AAX64320.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322713441|gb|EFZ05012.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 961
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 782 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 841
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 842 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 901
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 902 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 952
>gi|330505171|ref|YP_004382040.1| outer membrane protein [Pseudomonas mendocina NK-01]
gi|328919457|gb|AEB60288.1| outer membrane protein [Pseudomonas mendocina NK-01]
Length = 230
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y G ++ D + S N + + G + +G DYM+ + L+A RY
Sbjct: 136 YVGAGINYTWIFDEHVGSAASANGFDNFRAKNSWGLAWQVGA--DYMLTDSLMLNAQVRY 193
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I + ++NA +VD + + +G+ F
Sbjct: 194 IDIDTTAYVDNNALGVRAKVDVDVDPFVYMVGLGYKF 230
>gi|205351686|ref|YP_002225487.1| autotransporter/virulence factor [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205271467|emb|CAR36284.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|326626719|gb|EGE33062.1| putative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 1004
Score = 37.1 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 825 IFVEGNLSYSHFNNDLSANMSDGTYVDGNTSSDSWGFGLKLGYDLKLGDAGYVTPYGSVS 884
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 885 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 944
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 945 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 995
>gi|224582209|ref|YP_002636007.1| autotransporter/virulence factor [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224466736|gb|ACN44566.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
Length = 961
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 782 IFVEGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 841
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 842 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 901
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 902 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 952
>gi|168237477|ref|ZP_02662535.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194735140|ref|YP_002113403.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194710642|gb|ACF89863.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197289538|gb|EDY28901.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 1003
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 824 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 883
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 884 GLFQSGDDYQLSNDMKVDGQSYDSMRYEIGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 943
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 944 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 994
>gi|160899400|ref|YP_001564982.1| opacity protein and related surface antigens-like protein [Delftia
acidovorans SPH-1]
gi|160364984|gb|ABX36597.1| Opacity protein and related surface antigens-like protein [Delftia
acidovorans SPH-1]
Length = 268
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G G A++ S + N + + LG G+ Y +S+ YR
Sbjct: 171 VYGTAGLGLAHLQSSGWQG----NPNRQYFSDSQNNLAYALGFGVSYSPIQKVSIDLGYR 226
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKG-----NAHIASLGINMHF 242
Y+ +N ++V + + ++ S+G+ F
Sbjct: 227 YVGMGKTHSGANNF-TNVRGLQDEQMRAKLSSSEISVGLRYSF 268
>gi|54294218|ref|YP_126633.1| hypothetical protein lpl1283 [Legionella pneumophila str. Lens]
gi|53754050|emb|CAH15523.1| hypothetical protein lpl1283 [Legionella pneumophila str. Lens]
Length = 378
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 7/130 (5%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA-YVIDSSLEKVESDNSKNAKGRFD 177
Y+ K K + V + +L+ + GG G + E D + F
Sbjct: 248 NYQWKVKSDLVLASVKANIFRWKNLMPFVQGGVGASSNRASQYYENALPDVTPRISPNFA 307
Query: 178 GHGSS---VVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSN--AKSDVERVDRKGNA 231
H ++ LG GLD+ + LS Y Y + S ++ + + + NA
Sbjct: 308 NHTTTVIAYQLGAGLDWEIKPQWLLSLGYEYSDLGKVRSGYGTDSWGRETLSSKNLTSNA 367
Query: 232 HIASLGINMH 241
H
Sbjct: 368 GTLGFTYLFH 377
>gi|119776560|ref|YP_929300.1| outer membrane protein [Shewanella amazonensis SB2B]
gi|119769060|gb|ABM01631.1| outer membrane protein, putative [Shewanella amazonensis SB2B]
Length = 181
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 32/154 (20%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQ----LEDFVFGINCHTT 111
G Y G ++S + GLG G+N LE VFG +
Sbjct: 26 GFYAGGYVSNTNLDDKIGPFDESA-------WGLGAYGGYNFNDSFGLETSVFGTDSFID 78
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
++ +S D++ +Y GG + +
Sbjct: 79 GVDLQVVGLTF--------APTVRHAFS-DTVTVYLKGGVVYQVIA------------SD 117
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
D G+ +LG G+D + ++++ Y +
Sbjct: 118 DSLDDDYQGTGYLLGAGVDISFSSNLAMRVFYEF 151
>gi|89055469|ref|YP_510920.1| outer membrane protein, putative [Jannaschia sp. CCS1]
gi|88865018|gb|ABD55895.1| outer membrane protein putative [Jannaschia sp. CCS1]
Length = 188
Score = 37.1 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 52/155 (33%), Gaps = 21/155 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNG--LGIELGHNIQLEDFVFGINCH 109
WSG Y G + AD N G +G G+ D VFG+
Sbjct: 24 TDWSGFYAGGQL-----EFATADLDNMAGTTLNEGQGLMIGASGGYRFDGGDVVFGVTGA 78
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL--IYGMGGFGGAYVIDSSLEKVESD 167
D++L+AG + L + GG G + V +D
Sbjct: 79 ALFGSTSLEPVVPAATPDPTLDMLLRAGIEIGYDLGPVLVTGGLGQTF-------GVMTD 131
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+ + + F + IG DYMV+ +I + A
Sbjct: 132 ATNSRRTEFGSY-----FAIGADYMVSDEIMVGAE 161
>gi|307944552|ref|ZP_07659892.1| putative heat resistant agglutinin 1 protein [Roseibium sp.
TrichSKD4]
gi|307772301|gb|EFO31522.1| putative heat resistant agglutinin 1 protein [Roseibium sp.
TrichSKD4]
Length = 272
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 76/252 (30%), Gaps = 36/252 (14%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
+ V+ ++A DL P + E + G Y+ I P +
Sbjct: 13 AAAVMSTAAIAADLPAPIIEHV-------PEIPAPAA-VGGGFYLRGDIGYKIYGDPTQE 64
Query: 75 T---------INRKTYNSLLPNGLGIELGHNIQLE-----DFVFGINCHTTAAKDDSTFY 120
+R++ + G+G+ N D+
Sbjct: 65 YSDTTLGDIRYDRESLDDTWMIGVGVGYKFNKYFRTDLTIDYEAAAEAVGYVECAHPCGS 124
Query: 121 RLKEKYFIYGDVVLKAGY----SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
++ I V+ GY + + + Y G G AYV S G
Sbjct: 125 TSRDTADIDVWTVMLNGYVDLATWNKITPYVGAGIGAAYVNTSDFYSGSPTTPYQFDGSN 184
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH------IHSVNNSNAKSDVERVDRKGN 230
+ L G Y V + ++ A YRY +H+V + +++ + + +
Sbjct: 185 GEWNFAWALMAGASYAVTNNFAIDAGYRYKDLGEAKTTILHNVGSKDSRMEYKDL----T 240
Query: 231 AHIASLGINMHF 242
AH LG F
Sbjct: 241 AHEFRLGARYTF 252
>gi|297563540|ref|YP_003682514.1| hypothetical protein Ndas_4622 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847988|gb|ADH70008.1| hypothetical protein Ndas_4622 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 1024
Score = 37.1 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 10/139 (7%)
Query: 19 VPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWS--GNYVGLHISRLYETHPLADTI 76
P + ++ P+ D D D G+ G VG H + + D +
Sbjct: 201 APLEGVEMEWGAPQTSDYAWYTDATDAVGDYVVGMAEDLGGMVGAHGPEGWFSGSWGDNL 260
Query: 77 NRKTYNSLLPNGLGIELGHNI-QLEDFVFGINCHTTAAKDDS-TFYRLKE----KYFIYG 130
Y GLG +G + + ++ + + A K+ + + +E +++ G
Sbjct: 261 --WDYWGGTVEGLGSLVGASRDENGNWGWSLETAGNAWKEAAHSVVPWREWGDRPWYVIG 318
Query: 131 DVVLKAGYSVDSLLIYGMG 149
L G +V L+ G
Sbjct: 319 TAALNIGATVGGALLTATG 337
>gi|197249831|ref|YP_002145354.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197213534|gb|ACH50931.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 680
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 501 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 560
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 561 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 620
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 621 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 671
>gi|91223778|ref|ZP_01259042.1| hypothetical protein V12G01_18577 [Vibrio alginolyticus 12G01]
gi|91191270|gb|EAS77535.1| hypothetical protein V12G01_18577 [Vibrio alginolyticus 12G01]
Length = 171
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 26/168 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G I + T +LP +GIE G+ ++ +A D
Sbjct: 23 IYAGGQIGQSDIDSENDTTYGIHVGTGILPF-IGIEAGY-FNHGKVDLSLSGSRGSADFD 80
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
S + K L +Y GG V+ D +
Sbjct: 81 SFYLAAKPSID------------FGPLHVYAKGGINAFN--------VDYDGGLRNLDKD 120
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
DG S + G+G +Y + ++S+ ASY+ + +S+ S V
Sbjct: 121 DG--VSYMYGVGAEYFLLDNVSVGASYQ--AFGVDIEGDSDTVSSVTG 164
>gi|320577120|gb|ADW54069.1| outer membrane protein A [Sodalis glossinidius]
Length = 290
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 65/188 (34%), Gaps = 27/188 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAAK 114
G Y +R+ D + + N LG ELG++ L + + + A K
Sbjct: 1 GFYGNGFDNRIANGPTRDDQLGAGAFLGYQGNPYLGFELGYDW-LGRMAYKGSVNNGAFK 59
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
K Y + D L IY G G + DS K DN +
Sbjct: 60 AQGISLAAKLSYPL-----------TDDLDIYTRLG-GMVWRADS---KGAYDNGNAGRV 104
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
G S + +GL+Y + + Y+++ N +A + R D +
Sbjct: 105 SDHDTGVSPLAAVGLEYAWTKNWATRLDYQWVN------NIGDAGTVGTRPDNS----ML 154
Query: 235 SLGINMHF 242
S+G++ F
Sbjct: 155 SVGVSYRF 162
>gi|309751191|gb|ADO81175.1| Outer membrane protein P5 [Haemophilus influenzae R2866]
Length = 358
Score = 37.1 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 22/160 (13%)
Query: 67 YETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKY 126
Y N+ + LG+ + F +G+ D+ + Y
Sbjct: 29 YAGVKAGQGSFHDGINNNGAIKEDLSLGYGYRRNTFTYGVFGGYQILNQDNFGLAAELGY 88
Query: 127 FIYGDVVLKA-------------------GYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
+G V +A Y V D L +YG G E ++
Sbjct: 89 DNFGRVKFRAEGKTKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRSDYKFYE--DA 146
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ +++ K +S + +G +Y V ++++ Y+++
Sbjct: 147 NGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWL 186
>gi|209886274|ref|YP_002290131.1| porin, opacity type [Oligotropha carboxidovorans OM5]
gi|209874470|gb|ACI94266.1| porin, opacity type [Oligotropha carboxidovorans OM5]
Length = 272
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 29/99 (29%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ K ++ + + G + G G + + +++
Sbjct: 123 GTAGADNYTGHKSEWLVLTNAYADLGTWWNITPFVGAGIGAARVTLGGFNDYLDNGVHTG 182
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
+ L GL Y + + ++ +YRY+
Sbjct: 183 VAADASKWNFAWALHAGLAYKLAPNWTMELAYRYVDMGD 221
>gi|189219071|ref|YP_001939712.1| hypothetical protein Minf_1059 [Methylacidiphilum infernorum V4]
gi|189185929|gb|ACD83114.1| Conserved hypothetical protein [Methylacidiphilum infernorum V4]
Length = 377
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 68/223 (30%), Gaps = 36/223 (16%)
Query: 55 SGNYVGLHISRLYE--------THPLADTINRKTYNSLLPNGLGIELGHNI--------- 97
+G Y G+ + P + +T+ G G+++G+N
Sbjct: 156 TGIYFGVFGGAAFPMSNGISALNSPPLFSAGGQTHGDTAGVG-GVQVGYNFSGYKLDSQG 214
Query: 98 --------QLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVD-------- 141
Q E + G ++ + + + + + D
Sbjct: 215 KYWLQPAAQFEAYYIGQENISSTLVGGVAGTPMTHTPYAFNTELNMGIFVADGLIRFVNP 274
Query: 142 -SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG-IGLDYMVNYDISL 199
++ Y GG GGAY+ S + + + G G+ V G G+ Y S
Sbjct: 275 TKIVPYLGGGIGGAYLASSGTNMIAPNGANLLFGHSYSQGAFVGQGLAGVQYNFTDHWSA 334
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ + + + + + ++A GI +F
Sbjct: 335 FIEYKILWIKETEFSYLMFSGNSMLIKYPQSFNMALGGIRYNF 377
>gi|51320045|gb|AAU00343.1| Pap31 [Bartonella phage CO-04-1]
Length = 186
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 2 IALISTSAAQAADIVIPHEVVSPRVTPI----VSPSTFSWTGFYLGGQVGNFSSKVEITD 57
Query: 75 TINRKTYNSLL----PNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
+ + + P+G GI G NI+L + + G+ A T
Sbjct: 58 SGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDT 108
>gi|239950057|gb|ACS36760.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 196
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 31/63 (49%)
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGIN 239
+S+++G G++Y + +++ Y+++ + + ++ + ++H + GI+
Sbjct: 105 KTSLIVGAGVEYAILPELAFRVEYQWLSNVGNFTKAEVKENRRATYNYSPDSHSVTAGIS 164
Query: 240 MHF 242
F
Sbjct: 165 YRF 167
>gi|56414471|ref|YP_151546.1| flagellin structural protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197363392|ref|YP_002143029.1| flagellin structural protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128728|gb|AAV78234.1| putative flagellin structural protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197094869|emb|CAR60403.1| putative flagellin structural protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 981
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 802 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 861
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 862 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 921
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 922 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 972
>gi|187925819|ref|YP_001897461.1| hypothetical protein Bphyt_3849 [Burkholderia phytofirmans PsJN]
gi|187717013|gb|ACD18237.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 173
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 49/192 (25%), Gaps = 50/192 (26%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
++G YVG + +D S G G+N ++ FV G
Sbjct: 31 ASEFAGPYVGFKLG-----VNTSDASGVVNKASHTTAFPGFTAGYNFDVDRFVAGAEVFA 85
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
ST Y+ G + K G + + Y G +
Sbjct: 86 D-LHHGSTTYK-------DGGLDAKLGLPFNQFMPYVRIGLTTDWPD------------- 124
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ L Y++ H + S+ + R N
Sbjct: 125 ----------------------IRPHWGLGVEYKFAKHMSAVGEWTTDTSNHDGTRRTNN 162
Query: 231 AHIASLGINMHF 242
+ G+ HF
Sbjct: 163 SFTI--GVQYHF 172
>gi|83592649|ref|YP_426401.1| aromatic hydrocarbon degradation protein [Rhodospirillum rubrum
ATCC 11170]
gi|83575563|gb|ABC22114.1| Membrane protein involved in aromatic hydrocarbon degradation
[Rhodospirillum rubrum ATCC 11170]
Length = 429
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 4/121 (3%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN--- 168
A + S F LK + G V+ + S + + +GG + V D
Sbjct: 298 AWTNWSLFDELKIEND-KGGVITRVDESWEDTMFVALGGIYKPVEDVALRIGVAYDQAPV 356
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
K + + L G+ Y V SL ASY +I S+N + A+ ++
Sbjct: 357 GKKHRTARIPDTNRYWLAAGVSYAVTDSFSLDASYAHIFADRVSINETTAQGNLTGTYDS 416
Query: 229 G 229
Sbjct: 417 S 417
>gi|294634347|ref|ZP_06712885.1| SapA [Edwardsiella tarda ATCC 23685]
gi|291092244|gb|EFE24805.1| SapA [Edwardsiella tarda ATCC 23685]
Length = 210
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 61/198 (30%), Gaps = 25/198 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTA 112
+G Y G + E D ++ ++ G+ G+N F +
Sbjct: 28 TGYYAGAKMGISAEHLFNQDDVDGHGMSNDNKGVGNAGLVFGYNF-ANQFNLPVRAELDY 86
Query: 113 AKDDSTFYRLKEKYFIYGDVV-LKAGYSVDSLLIYGMG-------GFGGAYVIDSSLEKV 164
+ D V+ G G G Y S +
Sbjct: 87 TFRAHATSSHTNDQGMTNDSRLGLQTLMVNGYYDIKTGTDFTPYIGAGIGYANVSLKNDL 146
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ DN ++ F + +G G+ Y VN + L Y+Y+ + NS AK
Sbjct: 147 DGDNVQSNSNNF-----AWSVGTGVIYNVNPRLDLDLGYKYLDAGKATAGNSQAKVA--- 198
Query: 225 VDRKGNAHIASLGINMHF 242
H +LG+N +F
Sbjct: 199 ------THDFTLGVNYYF 210
>gi|168819028|ref|ZP_02831028.1| outer membrane autotransporter barrel domain protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205344215|gb|EDZ30979.1| outer membrane autotransporter barrel domain protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
Length = 970
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 791 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 850
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 851 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 910
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 911 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 961
>gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 352
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 48/163 (29%), Gaps = 24/163 (14%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPN--------GLGIELGHNIQ-----LEDFV 103
Y G+ ++ + TY + G+ +G+N+ +
Sbjct: 27 FYAGVRAGGVHYADFDSKNYAAGTYGNPGSEYRIDRDDFAAGLFMGYNVTPWFAIEGGYT 86
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
+ K ++ + G +A D + +Y G + L
Sbjct: 87 WLGEVTLKGDKYHDQGKVEQQAIDLVGKFTYQA---TDKVDLYTKVGGAWQFTRSKGLPG 143
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYI 206
+ + ++ G+G +Y ++S A Y+Y
Sbjct: 144 QTTTDRDDSLIA--------TAGLGAEYHFTDNLSARAEYQYY 178
>gi|114809812|gb|ABI81409.1| bacteria phage-associated hemin-binding membrane protein Pap31
[Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 4 IALISTSAAQAADIVVPHEVVSPRVTPI----VSPSTFSWTGFYLGGQVGNFSSKVEITD 59
Query: 75 TINRKTYNSLL----PNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
+ + + P+G GI G NI+L + + G+ A T
Sbjct: 60 SGKKNEFFGKDQTPKPSGFMGGIYAGSNIELGNNLILGVETDAVWADRGDT 110
>gi|224540351|ref|ZP_03680890.1| hypothetical protein BACCELL_05264 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518042|gb|EEF87147.1| hypothetical protein BACCELL_05264 [Bacteroides cellulosilyticus
DSM 14838]
Length = 1121
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%)
Query: 122 LKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS 181
+ D+ ++A Y V+ L G+ G + + + + +
Sbjct: 739 MSPTKDWLTDLKIRASYGVNGTLPSDYFGYMGLSSLTNGYLEQPGIIQSQLRNDDLQWET 798
Query: 182 SVVLGIGLDYMVNYDISLSASY 203
+ L +GLD+ + I+++ Y
Sbjct: 799 NYNLNLGLDFALWNRINVTLEY 820
>gi|77166271|ref|YP_344796.1| hypothetical protein Noc_2819 [Nitrosococcus oceani ATCC 19707]
gi|76884585|gb|ABA59266.1| hypothetical protein Noc_2819 [Nitrosococcus oceani ATCC 19707]
Length = 397
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 15/170 (8%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G S T P A + R S P+ +G LG ++ + +GI K +
Sbjct: 21 LGFENSFYNYTKPDAVSDVRLESPSEEPH-IGATLGADL--GRY-WGIEFAYDYIKTNLL 76
Query: 119 FYRLKEKYF-----IYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K+ G + + D L+ Y + G G S E +
Sbjct: 77 QTSGKKAGDYATTTWLGQLRFRYPLLQDRLVPYLLAGGGIGIGEFSGREDFSFTGGGSDT 136
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
V+G G +Y + +I+L +Y ++ S + ++
Sbjct: 137 VPLG------VVGGGAEYFITDNIALGVEAKYYFGFHPEISISTEERELT 180
>gi|320084645|emb|CBY94436.1| putative uncharacterized protein yaiT Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 597
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 418 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 477
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 478 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 537
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 538 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 588
>gi|229590671|ref|YP_002872790.1| putative TonB-dependent outer membrane receptor [Pseudomonas
fluorescens SBW25]
gi|229362537|emb|CAY49444.1| putative TonB-dependent outer membrane receptor [Pseudomonas
fluorescens SBW25]
Length = 686
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Query: 135 KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVN 194
+ GY D+ I GG +S +++ +N + + D ++ L +D+
Sbjct: 342 RLGYESDT--IRSFGGVYFGRTTNSFHDRLLFNNVQRGAAKGDVAINNAALFGEVDWDFA 399
Query: 195 YDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +L RY + + S +V + +A + LG++ F
Sbjct: 400 PNWTLITGLRYDYETNDTDIEQDDFSSPGKVKKSFSALLPKLGVDYQF 447
>gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 351
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 36/208 (17%)
Query: 42 NNVEYQDDEYGIWSG-NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE 100
N DD Y Y G + ++ D +N K + G + G Q
Sbjct: 26 NFAHSNDDVYNESESYFYAGQKLGWARYSNNCDDKVNCK----IDTFGYSVFSGF--QFN 79
Query: 101 DFVFGINCHTTAAKDDS----TFYRLKEKYFIYGDV--VLKAGYSVDSLLIYGMGGFGGA 154
+ + + + + + G++ + L Y G G
Sbjct: 80 RW-YALEGSISNYGSPDYKINSDFIESNTSIWGGEILSKFRVLDITSHLHAYAKLGLGYQ 138
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVN 214
Y+ S S +K+ G GL+Y + SL A ++I N
Sbjct: 139 YLNQPS-----SYTNKSHYFGLLG-------AAGLEYDITDQWSLRAEVQHIDFKEKEDN 186
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
+ K + +S+G++ F
Sbjct: 187 FNQGK----------DVTFSSIGLSYKF 204
>gi|240948418|ref|ZP_04752796.1| pertactin precursor [Actinobacillus minor NM305]
gi|240297244|gb|EER47802.1| pertactin precursor [Actinobacillus minor NM305]
Length = 311
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 38/129 (29%), Gaps = 5/129 (3%)
Query: 68 ETHPLADTINRKTYNSLLPNGLGIELGH--NIQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
T +D+ + + LG + NI+L FV + + +
Sbjct: 78 STRTASDSHSSGFEQDVHSVQLGADAALTDNIRLGGFVGNARSDVDFDGEYGSGKVKTQS 137
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
+YG + G+ D++ Y + + + K + GR G +
Sbjct: 138 LGLYGTYLANNGFYWDNVAKYE---YVKSESATTGKRKYNAYTLSTEVGRIHQLGQGWTV 194
Query: 186 GIGLDYMVN 194
+
Sbjct: 195 TPQIQAAWT 203
>gi|21673352|ref|NP_661417.1| tia invasion determinant-related protein [Chlorobium tepidum TLS]
gi|21646447|gb|AAM71759.1| tia invasion determinant-related protein [Chlorobium tepidum TLS]
Length = 219
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y MGG G A+V + KV+ +D + LG GL + +++L YRY
Sbjct: 134 YLMGGLGAAFVDMGTSFKVDG---VEYDSSYDKTVFAWQLGAGLGIKITNNVALDLGYRY 190
Query: 206 IPHHIHSVNNSN 217
+ N
Sbjct: 191 FKTGDLDLENKT 202
>gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 361
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 70/191 (36%), Gaps = 32/191 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAA 113
+G Y + +P+ + + N LG ELG++ G + +
Sbjct: 42 TGFY--GNGYTGINNNPIKSKLGAGAFVGYQANPYLGFELGYDW------LGRMKYAGST 93
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYG-MGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + + K Y V L +Y +GG +++ + +N
Sbjct: 94 ANAADSASFKAQGI---QLAAKLSYPVLPDLDVYSRLGGMVWRADSHAAIGGGDINN--- 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
D G S + +G++Y ++ + + Y+++ N +A + R D
Sbjct: 148 -----DDTGVSPLAAVGVEYAIDKNWAARVDYQWVS------NIGDAGTVGARPDNL--- 193
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 194 -LMSVGLSYRF 203
>gi|204927260|ref|ZP_03218462.1| pertactin family protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204323925|gb|EDZ09120.1| pertactin family protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 849
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 670 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 729
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 730 GLFQSGDDYQLSNDMKVDGQSYDSMRYEIGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 789
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 790 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 840
>gi|146997|gb|AAA24239.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+N G S V G++Y I+ Y++I N +A + R
Sbjct: 29 KNNVGGGDRSNHDTGVSPVFAGGVEYAWTPSIATRLEYQWIN------NIGDAGTVGTRP 82
Query: 226 DRKGNAHIASLGINMHF 242
D + S+G++ F
Sbjct: 83 DN----GMLSVGVSYRF 95
>gi|114320656|ref|YP_742339.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227050|gb|ABI56849.1| putative outer-membrane protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 218
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 29/195 (14%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL--GIELGHNIQLEDFVFGINCHTTAA 113
G Y+G I + + + + L +G+ G+ LG + + FG +
Sbjct: 45 GVYLGGQIG--WAGYDTDIETDGDSIKGLAASGVSSGVLLGTGTVNDGWYFGFQGNFLLN 102
Query: 114 KDDSTFYR-----LKEKYFIYGDVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESD 167
D++ ++E Y + + G + D +L+YG+ G+ S + D
Sbjct: 103 NADASLGTDADLDVEESYG----IDARLGRVISDRVLLYGLAGWQRTNAELSVAGVDKDD 158
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR 227
+ G G++ ++ Y + + + D + V+
Sbjct: 159 KDFDGFR----------FGAGVEMATQDNVFFRIEY-----TQTVYGSEDFRIDGDEVEA 203
Query: 228 KGNAHIASLGINMHF 242
+A L I F
Sbjct: 204 DPHAQDFHLVIGYRF 218
>gi|85860262|ref|YP_462464.1| ompA-like protein [Syntrophus aciditrophicus SB]
gi|85723353|gb|ABC78296.1| ompA-like protein [Syntrophus aciditrophicus SB]
Length = 264
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 69/210 (32%), Gaps = 35/210 (16%)
Query: 56 GNYVGLHISRLYET---HPLADTINRKTYNSL--LPNGLGIELGHNI-QLEDFVFGINCH 109
G Y+G+ D + Y+ LG++ G+ QL F +
Sbjct: 67 GPYIGVFGGLAIPDDLRWGWGDYYDDWGYDEDPDESWALGVKFGYIFPQLSYMAFELEYT 126
Query: 110 TTAAKDDSTFYRLKEKYF---------------IYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+D + + + +++ + Y + Y G G +
Sbjct: 127 CLGDQDYGQTWSYRRSNGDQVIDSYDGDFSAHNVMANLLFR--YPYGRVHPYVGFGLGLS 184
Query: 155 YVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG--IGLDYMVNYDISLSASYRYIPHHIHS 212
+ E + D ++ +G+++ + ++S +Y+Y
Sbjct: 185 MGNITEKGTREVNGQLYDSYDIDEDDAAFATQFILGVNFEIAPNLSAELAYKYFY----- 239
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ D+ D + H+ +LG+N+HF
Sbjct: 240 -----SEYDIINYDIEAEDHLFTLGLNVHF 264
>gi|239950061|gb|ACS36762.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 282
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 180 GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE----RVDRKGNAHIAS 235
+S++LG G++Y + +++ Y+++ ++ + + D +AH S
Sbjct: 95 KTSLLLGAGVEYAILPELAFRVEYQWLSRVGNANKAAQKRGDTAMFGPGSTYSPDAHSVS 154
Query: 236 LGINMHF 242
GI+ F
Sbjct: 155 AGISYRF 161
>gi|261210344|ref|ZP_05924639.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260840571|gb|EEX67132.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 293
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSV------DSLLIYGMGGFGGAYVIDSSLEKVE 165
A+K + +L Y + L GY D+ + G GF G Y + + V
Sbjct: 32 ASKMRAFSGKLGAGYDLNSHFGLYLGYDFMQYIPEDNDIHLGSMGFVGRYPLSKKWDLVG 91
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
+ + G G + LG+G+DY + + IS Y
Sbjct: 92 NAGVVKSFGEQSRSGFAGTLGVGVDYQLTHAISTRMGVNYYSG 134
>gi|194450577|ref|YP_002048359.1| heat resistant agglutinin 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194408881|gb|ACF69100.1| heat resistant agglutinin 1 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
Length = 245
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 57/201 (28%), Gaps = 11/201 (5%)
Query: 49 DEYGIWSGNYVGLH------ISRLYETHPLADTINRKTYNSLLPNGLG-IELGHNIQLED 101
D G W+ Y G + L + N + G G E + + +
Sbjct: 49 DGEGAWADKYKGSDKSDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGNAESKYRLSYWE 108
Query: 102 FVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSL 161
G K L Y S L Y +Y+ +
Sbjct: 109 SAGGAEFDDAQNKLSVNTLMLNAYYDFRNSSAFTPWISAG--LGYARVHHKTSYIYTDNS 166
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
S +A + + LG G+ Y V D SL SYRY+ ++ +
Sbjct: 167 PAGSEVYSASASKY--ENNLAWSLGAGVKYDVTQDFSLDLSYRYLDAGDSTLTYKDEDGA 224
Query: 222 VERVDRKGNAHIASLGINMHF 242
+ ++ LG +F
Sbjct: 225 KYKSSVDVRSNEFMLGATYNF 245
>gi|217971759|ref|YP_002356510.1| OmpA domain-containing protein transmembrane region-containing
protein [Shewanella baltica OS223]
gi|217496894|gb|ACK45087.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS223]
Length = 192
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 59/191 (30%), Gaps = 37/191 (19%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL----GIELGHNIQLEDFVFGINCHTT 111
G YVG + L N L+ IE G+ + D+ +
Sbjct: 35 GIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEGGY-VNFGDY----GNSLS 89
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ D LK Y I VD + +Y GG L + + +
Sbjct: 90 NAETDGYTAALKVSYPI-----------VDRVELYAKGGQLWYSTDYDVLGFSGNKDDE- 137
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V +G G+ + V ++A Y + I N SN D +
Sbjct: 138 ----------GVFVGAGVAFKVTDRFLINAEYTWYDAGITVENVSN------GADTDTDF 181
Query: 232 HIASLGINMHF 242
ASLG+ F
Sbjct: 182 KQASLGVEYRF 192
>gi|261251906|ref|ZP_05944480.1| hypothetical protein VIA_001927 [Vibrio orientalis CIP 102891]
gi|260938779|gb|EEX94767.1| hypothetical protein VIA_001927 [Vibrio orientalis CIP 102891]
Length = 195
Score = 36.7 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 13/160 (8%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FVFGINCHTTAAK 114
G YVG S++ + D +G + G++ + FV G
Sbjct: 24 GFYVGAAYSKMGYSSVYKDF--GSFKEQETRDGYAVNAGYDFAFGNFFVLGTELEYKDWG 81
Query: 115 -----DDSTFYRLKEKYFI--YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESD 167
D + K + +G V+ Y D IY G + ++ + S+
Sbjct: 82 GVSGIIDPNGLNIASKLDMTSFGVNVMPKMYFGDKFNIYAKAGLHNFSIDSTTSTAIGSN 141
Query: 168 NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
+ A +S+V G+GL Y IS +Y +
Sbjct: 142 SISLASS---SSDTSMVWGLGLGYDFTQHISAQTTYEVVD 178
>gi|322614654|gb|EFY11583.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322620173|gb|EFY17045.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322623467|gb|EFY20306.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322629235|gb|EFY26014.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322631955|gb|EFY28709.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637307|gb|EFY34009.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322646244|gb|EFY42758.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322652489|gb|EFY48843.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322653348|gb|EFY49681.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660503|gb|EFY56739.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664655|gb|EFY60848.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669292|gb|EFY65442.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322670838|gb|EFY66971.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678924|gb|EFY74979.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681952|gb|EFY77977.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322685219|gb|EFY81216.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194433|gb|EFZ79628.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197031|gb|EFZ82173.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203356|gb|EFZ88381.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323206899|gb|EFZ91852.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323210331|gb|EFZ95223.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323214573|gb|EFZ99324.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323223130|gb|EGA07473.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323223970|gb|EGA08264.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230103|gb|EGA14223.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323233841|gb|EGA17930.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238465|gb|EGA22523.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244153|gb|EGA28162.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246313|gb|EGA30296.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251939|gb|EGA35802.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257936|gb|EGA41615.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323261051|gb|EGA44643.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265019|gb|EGA48518.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323272582|gb|EGA55989.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 978
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 799 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 858
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 859 GLFQSGDDYQLSNDMKVDGQSYDSMRYEIGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 918
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 919 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 969
>gi|14578716|gb|AAK68965.1| major outer membrane protein [Pectobacterium carotovorum]
Length = 145
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N G+ G S V G++Y + +I+ Y++ + N +A + R
Sbjct: 14 ADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRP 67
Query: 226 DRKGNAHIASLGINMHF 242
D + SLG++ F
Sbjct: 68 DNS----MLSLGVSYRF 80
>gi|10945146|emb|CAC14216.1| SapA protein [Salmonella typhi]
Length = 961
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 782 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 841
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 842 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 901
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G G +V +G+G + + S Y+ + S
Sbjct: 902 DADVNGDSIDNGVEGFAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 952
>gi|291085555|ref|ZP_06353340.2| flagellar protein [Citrobacter youngae ATCC 29220]
gi|291071279|gb|EFE09388.1| flagellar protein [Citrobacter youngae ATCC 29220]
Length = 919
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 51/155 (32%), Gaps = 8/155 (5%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGIN-CHTTAAKDDSTFYRLKEKYF 127
T +++N +S G G++ G++ + + + + D Y+L
Sbjct: 757 TMTNGNSVNGNGISS-DAWGFGLKAGYDWKYDQNGYVTPYASVSGLFQDGDNYQLSNNMS 815
Query: 128 I----YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSV 183
+ Y + +AG S +G F I + S+++ D
Sbjct: 816 VDSQSYDSMRYEAGVSTGYTFAFGDQSFTPFAKIAYVYDDSNSNSANVNGDDIDNGVEGS 875
Query: 184 VLGIGL--DYMVNYDISLSASYRYIPHHIHSVNNS 216
+ GL + + S AS Y+ + S
Sbjct: 876 AVRAGLGGQFNFTKNFSAYASGDYLGGGDVDQDWS 910
>gi|212213184|ref|YP_002304120.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
gi|212011594|gb|ACJ18975.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
Length = 231
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 60/210 (28%), Gaps = 29/210 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTIN----------RKTYNSLLPNGLGIELGHNIQL 99
++G Y+ ++ Y T + G +LG+
Sbjct: 32 PAPSYAGVYLEGNLGYAYRPWRKDATTVVGLAKQAGLLGSSSRGNGGFTFGADLGYQFNQ 91
Query: 100 -----EDFVF--GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+ + + TT + K + + ++ ++G G
Sbjct: 92 YFAVEGGWFYLPKVKFTTTGVVNGLAAGTYTVKSGMAYAALKGMAPVYENTYVFGKLGVA 151
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
Y ++ + R G+ Y + S++A Y ++P + +
Sbjct: 152 YTY-NRANAGLPTNKIPATFGSRSRFWNPLF--AAGVQYYFTPNWSVNAQYTFVPGY-RN 207
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + V H+ ++G+ F
Sbjct: 208 ASSKRFVAPVT--------HLFTVGLGYKF 229
>gi|154707240|ref|YP_001425106.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|161349309|ref|ZP_02096693.1| outer membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|212218142|ref|YP_002304929.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
gi|154356526|gb|ABS77988.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|164601556|gb|EDQ95154.1| outer membrane protein [Coxiella burnetii 'MSU Goat Q177']
gi|212012404|gb|ACJ19784.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
Length = 231
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 60/210 (28%), Gaps = 29/210 (13%)
Query: 50 EYGIWSGNYVGLHISRLYETHPLADTIN----------RKTYNSLLPNGLGIELGHNIQL 99
++G Y+ ++ Y T + G +LG+
Sbjct: 32 PAPSYAGVYLEGNLGYAYRPWRKDATTVVGLAKQAGLLGSSSRGNGGFTFGADLGYQFNQ 91
Query: 100 -----EDFVF--GINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG 152
+ + + TT + K + + ++ ++G G
Sbjct: 92 YFAVEGGWFYLPKVKFTTTGVVNGLAAGTYTVKSGMAYAALKGMAPVYENTYVFGKLGVA 151
Query: 153 GAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
Y ++ + R G+ Y + S++A Y ++P + +
Sbjct: 152 YTY-NRANAGLPTNKIPATFGSRSRFWNPLF--AAGVQYYFTPNWSVNAQYTFVPGY-RN 207
Query: 213 VNNSNAKSDVERVDRKGNAHIASLGINMHF 242
++ + V H+ ++G+ F
Sbjct: 208 ASSKRFVAPVT--------HLFTVGLGYKF 229
>gi|16759351|ref|NP_454968.1| autotransporter/virulence factor [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142877|ref|NP_806219.1| autotransporter/virulence factor [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161239|ref|ZP_03346949.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213425182|ref|ZP_03357932.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213581930|ref|ZP_03363756.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
gi|213647656|ref|ZP_03377709.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|213854622|ref|ZP_03382862.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
gi|289828461|ref|ZP_06546319.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|25512227|pir||AD0548 puative autotransporter/virulence factor STY0405 [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16501642|emb|CAD08828.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138509|gb|AAO70079.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
Length = 961
Score = 36.7 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 782 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 841
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 842 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 901
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G G +V +G+G + + S Y+ + S
Sbjct: 902 DADVNGDSIDNGVEGFAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 952
>gi|16763753|ref|NP_459368.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|200390196|ref|ZP_03216807.1| pertactin family protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|49036538|sp|Q8ZRF8|YAIT_SALTY RecName: Full=Uncharacterized protein YaiT; Flags: Precursor
gi|16418875|gb|AAL19327.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|199602641|gb|EDZ01187.1| pertactin family protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|261245656|emb|CBG23452.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992073|gb|ACY86958.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301156985|emb|CBW16468.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911404|dbj|BAJ35378.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225095|gb|EFX50156.1| Putative flagellin structural protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323128687|gb|ADX16117.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332987321|gb|AEF06304.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 978
Score = 36.3 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 799 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 858
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 859 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 918
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 919 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 969
>gi|91785689|ref|YP_560895.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400]
gi|91689643|gb|ABE32843.1| hypothetical protein Bxe_A0088 [Burkholderia xenovorans LB400]
Length = 173
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 50/192 (26%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
++G Y+G + + I++ ++ ++ P G G+N + FV G
Sbjct: 31 ASQFAGPYLGFKVGVNSSN--ASGVISKASHTTVFP---GFTAGYNFDVNRFVVGAEAFA 85
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
+T G + K G + +L Y GF G
Sbjct: 86 DLHHGSTTCKD--------GGIDAKFGMPFNQVLPYVRIGFTG----------------- 120
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
D + G+G++Y IS + + + SN + R N
Sbjct: 121 ------DDPDTRFHWGLGVEYKFARHISAVGEW--------TTDTSNH----DGTKRTNN 162
Query: 231 AHIASLGINMHF 242
+ G+ HF
Sbjct: 163 SFTI--GLQYHF 172
>gi|295690436|ref|YP_003594129.1| hypothetical protein Cseg_3070 [Caulobacter segnis ATCC 21756]
gi|295432339|gb|ADG11511.1| hypothetical protein Cseg_3070 [Caulobacter segnis ATCC 21756]
Length = 241
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 40/230 (17%)
Query: 45 EYQDDEYGIWSGNYVGLHIS--RLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF 102
DE ++ G + G+++ + + LA R G+ +G +
Sbjct: 20 TAVADESRLYVGAFAGVNLGEKQTFTGANLAGAPRRIDAPQDEGALAGVVVGLVASEGAW 79
Query: 103 -VFGINCHTTAAKDD---------------------STFYRLKEKYFIYGDVVLKAGY-- 138
+ K+D + + +G + G
Sbjct: 80 GRLRFEAELASRKNDVEKLTLNGVRRGLIDGESQVTTQMVNITYDTPRWGKLRGMVGAGV 139
Query: 139 ---SVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
S D + Y +G GA S + S + + + + IG Y ++
Sbjct: 140 GAASFDYDIQYDVGAIPGAPTGGSIGPIINIPTSTSGR-------LAYQVMIGGQYELSP 192
Query: 196 DISLSASYRYI---PHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
L+A RY+ H I N + D +D K + + G F
Sbjct: 193 SWELTAELRYLWGDDHKIERFNQTTGALD-SVLDAKYESSAVTFGARHRF 241
>gi|2499351|sp|Q99124|OMPA_ESCBL RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146989|gb|AAA24235.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 20/113 (17%)
Query: 132 VVLKAGYS-VDSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K Y D L IY +GG +++ + N G S V G+
Sbjct: 1 LTAKLSYPIYDDLDIYTRLGGMVWRADAKNNVVGGDRSNHDT--------GVSPVFAGGV 52
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y I+ Y++I N +A + R D + S+G++ F
Sbjct: 53 EYAWTPSIATRLEYQWIN------NIGDAGTVGTRPDN----GMLSVGVSYRF 95
>gi|307610035|emb|CBW99569.1| hypothetical protein LPW_13391 [Legionella pneumophila 130b]
Length = 378
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 7/130 (5%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG-GAYVIDSSLEKVESDNSKNAKGRFD 177
Y+ K K + S +++ + GG G + E D + F
Sbjct: 248 NYQWKVKSDLVLASAKANVISWKNIMPFVQGGVGVSSNKGSQYYENALPDVTPRISPNFA 307
Query: 178 GHGSS---VVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSN--AKSDVERVDRKGNA 231
H ++ LG GLD+ + LS Y Y + S ++ ++ + + NA
Sbjct: 308 NHTTTVIAYQLGAGLDWEIKPQWLLSLGYEYSDLGKVRSGYGTDSWSRETLSSKNLTSNA 367
Query: 232 HIASLGINMH 241
H
Sbjct: 368 GTLGFTYLFH 377
>gi|257464192|ref|ZP_05628572.1| Serine protease [Fusobacterium sp. D12]
gi|317061711|ref|ZP_07926196.1| predicted protein [Fusobacterium sp. D12]
gi|313687387|gb|EFS24222.1| predicted protein [Fusobacterium sp. D12]
Length = 753
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 15/75 (20%)
Query: 183 VVLGIGLDYMVNYDISLSASY---RYIPHHIHSVNNSNAKSDV------------ERVDR 227
+G GL Y + + SL Y +Y H H + S + + R
Sbjct: 679 WTVGAGLQYHIFDNFSLLGRYNYMQYYDLHNHQNSLSGFGAGIGFDTFMGPILFSVGRTR 738
Query: 228 KGNAHIASLGINMHF 242
K +A I + HF
Sbjct: 739 KYHAPIFEITFGYHF 753
>gi|120611921|ref|YP_971599.1| hypothetical protein Aave_3264 [Acidovorax citrulli AAC00-1]
gi|120590385|gb|ABM33825.1| hypothetical protein Aave_3264 [Acidovorax citrulli AAC00-1]
Length = 306
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 20/180 (11%)
Query: 16 SIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADT 75
V P A D+ K Y + SG+Y+ + + + L T
Sbjct: 79 PWVGPAAQSANDVLAITKTLNAIGIAGITSYVKNTA---SGSYIIIKGYAAHRSGALTGT 135
Query: 76 INRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDV--- 132
T +L GLG++ I + F+ G+ T D F K Y + G +
Sbjct: 136 RYLATNPLMLKFGLGVQSLKGIAIGGFILGVTVSTGIEVMDFIFNNEKTMYDLVGGIGVE 195
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
+K G L+ YGMG G++ + V + ++G GL+Y
Sbjct: 196 AVKGGL--GGLVAYGMGVAVGSFTAVAVAPLV------------TMAFFAFLVGAGLNYA 241
>gi|238025985|ref|YP_002910216.1| outer membrane protein, OmpW family protein [Burkholderia glumae
BGR1]
gi|237875179|gb|ACR27512.1| Outer membrane protein, OmpW family protein [Burkholderia glumae
BGR1]
Length = 243
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 9/177 (5%)
Query: 66 LYETHPLADTINRKTYNSLLPNGLGIELGH---NIQLEDFVFGI--NCHTTAAKDDSTFY 120
P+ ++ + LGI G+ + +FV+GI + S F
Sbjct: 52 SVGGTPVNRSVANTGAGISDADTLGITTGYFVTDHIAAEFVYGIPPKFNLNGKGSLSPFG 111
Query: 121 RLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHG 180
L Y V+LK ++ G G +Y+ + + N G
Sbjct: 112 TLGHAYQWSPAVLLKYYFNSAEAKFRPYVGVGASYIYFTGAKLTNRTFENNVLGGPTNVT 171
Query: 181 SSV----VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
+S V G +Y S YIP + + + + V + + AHI
Sbjct: 172 TSNQWAPVFNAGFNYNFTKHWFAGVSISYIPVSLTATLTTQRPTQVGTLTQTSQAHI 228
>gi|254286689|ref|ZP_04961644.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150423273|gb|EDN15219.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 182
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 49/152 (32%), Gaps = 16/152 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--------AKD 115
+ L +R ++ + G+N Q F+ G++ +
Sbjct: 21 GSSPYSFSLNTGFSRVDNSASTNEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEMLNT 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+K + F +G + + ++Y GG V + DN +
Sbjct: 80 QKQKIDVKVEGFYFGAFFEQP--INNLTILYARGGLSQFKVKERYELGAIGDN-----RQ 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G + +G + ++ ++L+ Y P
Sbjct: 133 FSGTNPYIGIGTKVQSSIDKSLALTMELSYYP 164
>gi|416606|sp|Q00595|ALKL_PSEOL RecName: Full=Outer membrane protein AlkL; Flags: Precursor
gi|5824149|emb|CAB54056.1| outer membrane protein [Pseudomonas putida]
Length = 230
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 22/247 (8%)
Query: 1 MNFNGYGALFF-VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYV 59
M+F+ Y + V+ + V+ + + P K +N+ D + +S YV
Sbjct: 1 MSFSNYKVIAMPVLVANFVLGAATAWANENYPAKSAGYNQGDWVASFN------FSKVYV 54
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLE---DFVFGINCHTTAAKDD 116
G + L + + L ++ + + DF G+ +
Sbjct: 55 GEELGDLNVG---GGALPNADVSIGNDTTLTFDIAYFVSSNIAVDFFVGVPARAKFQGEK 111
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
S + YG +L Y DS +Y G G V L ++D + ++
Sbjct: 112 SISSLGRVSEVDYGPAILSLQYHYDSFERLYPYVGVGVGRV----LFFDKTDGALSSFDI 167
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D + +G L Y + L++ RYIP V + V + + I S
Sbjct: 168 KDKWAPAFQVG--LRYDLGNSWMLNSDVRYIPFK-TDVTGTLGPVPVS-TKIEVDPFILS 223
Query: 236 LGINMHF 242
LG + F
Sbjct: 224 LGASYVF 230
>gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179]
gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179]
Length = 361
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 76/227 (33%), Gaps = 22/227 (9%)
Query: 23 SLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYN 82
++A+ + + + A + W+ + + ++ +
Sbjct: 5 AIALAISGLAFVSVAQAAPQANTFYAGAKAGWASFHNDVKQLDNIYGQDAYSSLEQDEKF 64
Query: 83 SLLPNGL--GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG-DVVLKAGYS 139
+ N + G+ G+ I ++F ++ ++ +G ++ LKA Y
Sbjct: 65 GVHRNSVTYGVFGGYQI-TDNFAVEAGYDFYGQLKAHQGDNVRFRHTAHGLNLSLKASYP 123
Query: 140 V---DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
V D L +YG G + E S++ S V G++Y + +
Sbjct: 124 VAYVDGLDVYGRLGAALIRSDYAVHTNGEKTLSEHKL------KVSPVFAAGVEYAILPE 177
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSD-VERVDRKGNAHIASLGINMHF 242
++ Y++I K D E + + SLG++ F
Sbjct: 178 LAARLEYQWI--------AKVGKVDQFEDISYSPSIGSVSLGLSYRF 216
>gi|260433629|ref|ZP_05787600.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417457|gb|EEX10716.1| putative outer membrane protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 172
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 29/188 (15%)
Query: 44 VEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFV 103
Q W+G Y G + + +G +G+++ L FV
Sbjct: 14 PVAQMAWAEDWTGPYAGFTFG--------YTDADGPGGSGGNSGSIGANIGYDLDLGSFV 65
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEK 163
G D + V L+ GY L Y + G A
Sbjct: 66 VGGEFEYDRLNLD--LGASEGSLDSVSRVKLRGGYEFGPALGYVVVGAARANT------- 116
Query: 164 VESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVE 223
SD+ A V GIG+ Y + + +S + + + + ++
Sbjct: 117 -SSDSDTAA-----------VYGIGVAYPLGDRLIISGEALRQNFNDVTRSRGDLDTNTF 164
Query: 224 RVDRKGNA 231
+
Sbjct: 165 NLRTTFRF 172
>gi|194447396|ref|YP_002044405.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205357182|ref|ZP_02345579.2| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|194405700|gb|ACF65919.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205323511|gb|EDZ11350.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 868
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 689 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 748
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 749 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 808
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 809 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 859
>gi|194444959|ref|YP_002039613.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194403622|gb|ACF63844.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
Length = 470
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 291 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 350
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 351 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 410
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 411 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 461
>gi|58422905|gb|AAW73252.1| OmpA [Salmonella sp. CDC 156-87]
Length = 226
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Query: 137 GYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
GY + D L +Y G G + D+ +++KN G S V G++Y +
Sbjct: 1 GYPITDDLDVYTRLG-GMVWRADTKSNTPGGESTKNHDT-----GVSPVFAGGIEYAITP 54
Query: 196 DISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+I+ Y++ + N +A + R D + S+G++ F
Sbjct: 55 EIATRLEYQW------TNNIGDANTIGTRPDN----GLLSVGVSYRF 91
>gi|146307557|ref|YP_001188022.1| membrane protein involved in aromatic hydrocarbon degradation
[Pseudomonas mendocina ymp]
gi|145575758|gb|ABP85290.1| membrane protein involved in aromatic hydrocarbon degradation
[Pseudomonas mendocina ymp]
Length = 529
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY----IPHHIHSVNNSN 217
+ + + G+ + G+G+ Y VN ++L A Y Y IP + V
Sbjct: 394 TFGGGNATDRSIILDRGYRDTWSWGVGVQYDVNDRLALRAGYEYRPSAIPKNKADVLAPV 453
Query: 218 AKSDVERVDRKGNAH---IASLGINM 240
+D+ + +G N
Sbjct: 454 GDADLYGLGLGYRWDKDTTIDVGFNY 479
>gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
Length = 327
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 19/165 (11%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + G G+ LG+NI V G + A
Sbjct: 27 YAGARVGGTSYSDFSGLGPAQIDK---EDWGGGVFLGYNIVPWFAVEGGYTYLGEADIKG 83
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
T ++++ D+V K ++V + + ++ G + S V D
Sbjct: 84 TNTSIEQQGI---DLVGKFTWNVTNSIDLFAKAGGFYYFADSSGPIDVSDD--------- 131
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSD 221
G G+G +Y N ++S Y+Y + +A D
Sbjct: 132 ---GIIGTAGVGAEYFFNKNLSARLEYQYYHDVELKDSGIDASWD 173
>gi|153831842|ref|ZP_01984509.1| putative conserved hypothetical protein [Vibrio harveyi HY01]
gi|148871840|gb|EDL70663.1| putative conserved hypothetical protein [Vibrio harveyi HY01]
Length = 171
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 26/168 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G I + T +LP +GIE+G+ + ++ + K D
Sbjct: 23 LYAGGQIGQSDIDSESDTTYGIHVGTGILPL-IGIEVGYFNHGQ-----VDLNLGGNKGD 76
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
F + K L +Y GG VE + + ++ +
Sbjct: 77 VDFSSFY--------LAAKPSIDFGPLHVYAKGGINAFN--------VEYNGNLSSLDKD 120
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
DG S + G+G +Y + +ISL ASY+ + +S+ S +
Sbjct: 121 DG--VSYMYGVGAEYFLLDNISLGASYQ--AFGVDIDGDSDTVSSITG 164
>gi|52841560|ref|YP_095359.1| hypothetical protein lpg1329 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628671|gb|AAU27412.1| hypothetical protein lpg1329 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 389
Score = 36.3 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 7/130 (5%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFG-GAYVIDSSLEKVESDNSKNAKGRFD 177
Y+ K K + S +L+ + GG G + E D + F
Sbjct: 259 NYQWKVKSDLVLASAKANVISWKNLMPFVQGGVGVSSNRASQYYESALPDVTPRISPNFA 318
Query: 178 GHGSS---VVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNA--KSDVERVDRKGNA 231
H ++ LG GLD+ + LS Y Y + S +++ + + + NA
Sbjct: 319 NHTTTVFAYQLGAGLDWEIRPQWLLSLGYEYSDLGKVRSGYGTDSWNRETLSSKNLTSNA 378
Query: 232 HIASLGINMH 241
H
Sbjct: 379 GTLGFTYLFH 388
>gi|332876418|ref|ZP_08444187.1| hypothetical protein HMPREF0022_03840 [Acinetobacter baumannii
6014059]
gi|332735428|gb|EGJ66486.1| hypothetical protein HMPREF0022_03840 [Acinetobacter baumannii
6014059]
Length = 473
Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 330 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITH 389
Query: 241 HF 242
F
Sbjct: 390 QF 391
>gi|229903102|ref|ZP_04518216.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
gi|229679844|gb|EEO75946.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
Length = 205
Score = 36.3 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 185 LGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +G +Y + + Y+++ N D E V + + + S+G++ F
Sbjct: 2 VALGAEYAWTKNWATRMEYQWV----------NNIGDRETVGARPDNGLLSVGVSYRF 49
>gi|332852014|ref|ZP_08433881.1| hypothetical protein HMPREF0021_01454 [Acinetobacter baumannii
6013150]
gi|332871767|ref|ZP_08440207.1| hypothetical protein HMPREF0020_03862 [Acinetobacter baumannii
6013113]
gi|332729591|gb|EGJ60929.1| hypothetical protein HMPREF0021_01454 [Acinetobacter baumannii
6013150]
gi|332731237|gb|EGJ62535.1| hypothetical protein HMPREF0020_03862 [Acinetobacter baumannii
6013113]
Length = 473
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 330 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITH 389
Query: 241 HF 242
F
Sbjct: 390 QF 391
>gi|229527826|ref|ZP_04417217.1| hypothetical protein VCG_000900 [Vibrio cholerae 12129(1)]
gi|229334188|gb|EEN99673.1| hypothetical protein VCG_000900 [Vibrio cholerae 12129(1)]
Length = 182
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 16/152 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--------AKD 115
+ L+ +R S + G+N Q F+ G++ +
Sbjct: 21 GNSPYSFSLSTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEMLNT 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+K + F +G + + ++Y GG V + V DN +
Sbjct: 80 QKQKIDVKVEGFYFGAFFEQP--INNLTILYARGGLSQFKVKERYELGVIGDN-----RQ 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G + +G + ++ ++L+ Y P
Sbjct: 133 FSGTNPYIGIGTKVQSSIDKSLALTMELSYYP 164
>gi|161504592|ref|YP_001571704.1| adhesin/invasin PagN [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160865939|gb|ABX22562.1| hypothetical protein SARI_02706 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 254
Score = 36.3 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y G G A V + + D N + + GIG Y V +I++ ASY+Y
Sbjct: 156 YISAGIGLARVKLKNNT-MSEDFDINETLAASKNNFAWGAGIGAKYAVTDNIAIDASYKY 214
Query: 206 IPHHIHSVNNSNAKSD 221
I S++ +N D
Sbjct: 215 INAGKVSISKNNYAGD 230
>gi|224137700|ref|XP_002322622.1| predicted protein [Populus trichocarpa]
gi|222867252|gb|EEF04383.1| predicted protein [Populus trichocarpa]
Length = 767
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 44/147 (29%), Gaps = 20/147 (13%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL--EDFVFGINCH 109
G W Y G + R + P T + + + +G+G G N +V + H
Sbjct: 92 GEW---YKGKTMGRGRFSWPSGATYEGEFKSGYM-DGIGTYTGSNGDTYRGQWVMNMK-H 146
Query: 110 TTAAKDDSTFYRLKEKYFIYGDVVLKAGY----------SVDSLLIYGMGGFGGAYVIDS 159
K S ++ G Y + L+ G GGF + +
Sbjct: 147 GHGLKHFSNGDWYDGEWR-RGFQEGNGKYEWKNGNHYVGEWKNGLMCGKGGF--VWTNGN 203
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLG 186
+ D G F S +G
Sbjct: 204 KFDGNWEDGLPKGNGTFKWLDGSFYVG 230
>gi|209695291|ref|YP_002263220.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
gi|208009243|emb|CAQ79504.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
Length = 367
Score = 36.3 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 35/196 (17%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y+G I + + G G+ LG+ +L +++ I
Sbjct: 53 IYIGGKIG--WTHFSNGCESQNLDCDK-EAMGGGVFLGY--KLNEWLA-IEGGYDYLGKA 106
Query: 117 STFYRLKEKYFIYGDVVLK-----AGYSVDSLL-----IYGMGGFGGAYVIDSSLEKVES 166
Y + I K G D L ++G G G + D E++
Sbjct: 107 KAIYPSLDDPSIDAPYSAKFQGIELGLKADYYLNDNWNVFGKVG-GLGWRADKKGEELNY 165
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVD 226
D + S++LG GL+Y + + Y++ SV N
Sbjct: 166 DVEGRDQ------DISLMLGAGLEYRLTKQLKTRFEYQWFD----SVGGEN--------T 207
Query: 227 RKGNAHIASLGINMHF 242
N + ++G+ F
Sbjct: 208 GGSNINFITIGLTYSF 223
>gi|170720675|ref|YP_001748363.1| outer membrane autotransporter [Pseudomonas putida W619]
gi|169758678|gb|ACA71994.1| outer membrane autotransporter barrel domain protein [Pseudomonas
putida W619]
Length = 729
Score = 36.3 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 56/172 (32%), Gaps = 8/172 (4%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLED-FV 103
+ D + G + L+ + L+D K S GL +E G +++L D +
Sbjct: 541 TWLDPQSGYYFDGVAKLNRYQNRAEVQLSDGTKTKGDYSNHGVGLSLEAGRHLKLGDGYF 600
Query: 104 FGINCHTTAAKDDSTFYRLKEKYFIYGD----VVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
A Y L GD + K G + YG G Y+ +
Sbjct: 601 VEPYAQLAAMTIKGQSYHLDNGLRASGDDTHSLQGKLGTTAGRTFDYGEGRMVQPYLRAA 660
Query: 160 -SLEKVESDNSKNAKGRF--DGHGSSVVLGIGLDYMVNYDISLSASYRYIPH 208
+ E V + + F D G+ LG G+ + A + Y
Sbjct: 661 VAHEFVNGNQVRVNGNSFHNDLAGTRAELGAGVVAAWSQQWQAHAEFDYANG 712
>gi|15602651|ref|NP_245723.1| hypothetical protein PM0786 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721089|gb|AAK02870.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 353
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 14/193 (7%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+ + GL+ ++ E R + + G I ++L FG A
Sbjct: 36 WASFHDGLNQAKYLEAPEATFGFKRNSVTYGVFGGYQITDNFAVELGYDDFG-RAKLRMA 94
Query: 114 KDDSTFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ D + K+ +G + LKA Y V D L IY G + +
Sbjct: 95 EKD-QKAKDAAKHTNHGAHLSLKASYPVLDGLDIYARVGAALIRSDYKVYDHSDPAKLPQ 153
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHSVNNSNAKSDVERVDRKG 229
K S V GL+Y +++L Y+++ + V ERVD +
Sbjct: 154 FKRTHS-TQVSPVFAGGLEYAFMPELALRVEYQWVNNVGKVKDVLG-------ERVDYRP 205
Query: 230 NAHIASLGINMHF 242
+ + G++ F
Sbjct: 206 DIGSVTAGLSYRF 218
>gi|205358934|ref|ZP_02665116.2| outer membrane autotransporter barrel domain protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|205340388|gb|EDZ27152.1| outer membrane autotransporter barrel domain protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
Length = 681
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 502 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 561
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 562 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 621
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 622 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 672
>gi|198245524|ref|YP_002214326.1| outer membrane autotransporter [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197940040|gb|ACH77373.1| outer membrane autotransporter [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326622073|gb|EGE28418.1| outer membrane autotransporter [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 681
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 502 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 561
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 562 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 621
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 622 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 672
>gi|299770601|ref|YP_003732627.1| putative protein (DcaP-like) [Acinetobacter sp. DR1]
gi|298700689|gb|ADI91254.1| putative protein (DcaP-like) [Acinetobacter sp. DR1]
Length = 428
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGI 238
+ +G G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 283 VAWGVGFGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTISLGI 342
Query: 239 NMHF 242
F
Sbjct: 343 THQF 346
>gi|283834312|ref|ZP_06354053.1| putative flagellin structural protein [Citrobacter youngae ATCC
29220]
gi|291069842|gb|EFE07951.1| putative flagellin structural protein [Citrobacter youngae ATCC
29220]
Length = 973
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ +++ Y S G G++LG++++L D +G
Sbjct: 794 IFVDGNLSYSHFNNDLSASMSNGQYVDGSTSADAWGFGLKLGYDLKLGDAGYVTPYGSVS 853
Query: 109 HTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 854 GLFQSGDDYKLSNDMKVDGQSYDSMRYELGVDAGYTFAYSDDQALTPYFKLAYVYDDSNN 913
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D++ N +G GS+V +G+G + + S Y+ + S
Sbjct: 914 DSNVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 964
>gi|146305475|ref|YP_001185940.1| OmpW family protein [Pseudomonas mendocina ymp]
gi|145573676|gb|ABP83208.1| OmpW family protein [Pseudomonas mendocina ymp]
Length = 230
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 18/245 (7%)
Query: 1 MNFNGYGALFF-VVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYV 59
M+F+ Y + V+ + V+ + + P K +N+ D + +S YV
Sbjct: 1 MSFSNYKVIAMPVLVANFVLGAATAWANENYPAKSAGYNQGDWVASFN------FSKVYV 54
Query: 60 GLHISRLYETHPLADTINRKTYNSLLPN-GLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
G + L + N + + NI ++ FV G+ + S
Sbjct: 55 GEELGDLNVGGGALPNADVSIGNDTTLTFDIAFFVSSNIAVDFFV-GVPARAKFQGEKSI 113
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ YG +L Y DS +Y G G V L ++D + ++ D
Sbjct: 114 SSLGRVSEVDYGPAILSLQYHYDSFERLYPYVGVGVGRV----LFFDKTDGALSSFDIKD 169
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLG 237
+ +G L Y + L++ RYIP V + V + + I SLG
Sbjct: 170 KWAPAFQVG--LRYDLGNSWMLNSDVRYIPFK-TDVTGTLGPVPVS-TKIEVDPFILSLG 225
Query: 238 INMHF 242
+ F
Sbjct: 226 ASYVF 230
>gi|329755848|gb|AEC04321.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 19/198 (9%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAA 113
W+ + GL+ ++ + + T K + G+ G+ I ++F +
Sbjct: 36 WASFHDGLNQAKDLSSAANSGTFGFKRNSVT----YGVFGGYQI-TDNFAVELGYDDFGR 90
Query: 114 KDDSTFYR-----LKEKYFIYGD-VVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVES 166
F K+ +G + LKA Y V L +Y G +
Sbjct: 91 AKLRHFLPELKAATVAKHTNHGAHLSLKASYPVLEGLDVYARVGAALVRSDYKFYNDAKG 150
Query: 167 D--NSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
+ R S V GL+Y +++L Y+++ + + ER
Sbjct: 151 EPVLDLQNYKRTHSTQVSPVFAGGLEYAFIPELALRVEYQWLNNVGKLKDAKG-----ER 205
Query: 225 VDRKGNAHIASLGINMHF 242
VD + + + G++ F
Sbjct: 206 VDYRPDIGSVTAGLSYRF 223
>gi|320354994|ref|YP_004196333.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfobulbus propionicus DSM 2032]
gi|320123496|gb|ADW19042.1| membrane protein involved in aromatic hydrocarbon degradation
[Desulfobulbus propionicus DSM 2032]
Length = 410
Score = 35.9 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 187 IGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G+ Y VN D+ L +Y Y SVNN V+ + AH+ + G+ F
Sbjct: 359 AGVRYKVNKDMELGVAYLYDDKESRSVNNGT----VKGTIDEAGAHLLTFGLTYAF 410
>gi|330503560|ref|YP_004380429.1| aromatic hydrocarbon degradation membrane protein [Pseudomonas
mendocina NK-01]
gi|328917846|gb|AEB58677.1| aromatic hydrocarbon degradation membrane protein [Pseudomonas
mendocina NK-01]
Length = 529
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 162 EKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY----IPHHIHSVNNSN 217
+ + + G+ + G+G+ Y VN ++L A Y Y IP + V
Sbjct: 394 TFGGGNATDRSIILDRGYRDTWSWGVGVQYDVNDRLALRAGYEYRPSAIPKNKADVLAPV 453
Query: 218 AKSDVERVDRKGNAH---IASLGINM 240
+D+ + +G N
Sbjct: 454 GDADLYGLGLGYRWDKDTTIDVGFNY 479
>gi|237730340|ref|ZP_04560821.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905879|gb|EEH91797.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 973
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ Y S G G++LG++++L D +G
Sbjct: 794 IFVDGNLSYSHFNNDLSANMSNGQYVDGSTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 853
Query: 109 HTTAAKDD-STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 854 GLFQSGDDYKLSNDMKVDSQSYDSMRYELGVDAGYTFAYSDDQALTPYFKLAYVYDDSNN 913
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D+ N +G GS+V +G+G + + S Y+ + S
Sbjct: 914 DSDVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 964
>gi|118581048|ref|YP_902298.1| surface antigen msp4 family protein [Pelobacter propionicus DSM
2379]
gi|118503758|gb|ABL00241.1| surface antigen msp4 family protein [Pelobacter propionicus DSM
2379]
Length = 222
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y GG G A + V + + D + +G G+D +N SL YRY
Sbjct: 131 YLGGGIGFATLYLDDTSGVSNGVRWSLYDSDDDTVFAYQIGAGIDISINRYFSLDVGYRY 190
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ NA K +H A+LG+ F
Sbjct: 191 FATDKGKFDEGNA-----GTRMKFESHNATLGLRFKF 222
>gi|197265975|ref|ZP_03166049.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205357779|ref|ZP_02573310.2| flagellar protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205360398|ref|ZP_02683178.2| pertactin family protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|197244230|gb|EDY26850.1| flagellar protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205329506|gb|EDZ16270.1| flagellar protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205349912|gb|EDZ36543.1| pertactin family protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 931
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 752 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 811
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 812 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 871
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 872 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 922
>gi|239995605|ref|ZP_04716129.1| putative outer membrane protein A [Alteromonas macleodii ATCC
27126]
Length = 198
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG----LGIELGHNIQLEDFVFGINCHT 110
SG YVG + L ++ + L+ + IE G+ I D+
Sbjct: 37 SGFYVGGNYGYLRVEGEDDFDDDKDVWQGLVGYKFNEWIAIEGGY-IDFGDY----GNDL 91
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
A+ D +K + + +Y G + + + V DN
Sbjct: 92 AGAETDGYTAAIKGILPL-----------TERFSLYAKAGQLWSET-EYNFAGVSRDNDD 139
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ +G GL Y + + ++A Y ++ A D++ D + +
Sbjct: 140 ESL----------FVGAGLSYAITSNFLVNAEYTVYD---TELDADEAFDDIDDTDFETD 186
Query: 231 AHIASLGINMHF 242
AS+G+ F
Sbjct: 187 LKQASIGVEYRF 198
>gi|320577070|gb|ADW54044.1| outer membrane protein A [Sodalis glossinidius]
Length = 267
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 66/189 (34%), Gaps = 27/189 (14%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAA 113
+G Y +R+ D + + N LG ELG++ L + + + A
Sbjct: 6 TGFYGNGFDNRIANGPTRDDQLGAGAFLGYQANPYLGFELGYDW-LGRMAYKGSVNNGAF 64
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K K Y + D L IY G G + DS K DN +
Sbjct: 65 KAQGISLAAKLSYPL-----------TDDLDIYTRLG-GMVWRTDS---KGAYDNGNAGR 109
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G S + +GL+Y + + Y+++ N +A + R D +
Sbjct: 110 VSDHDTGVSPLAAVGLEYAWTKNWATRLDYQWVN------NIGDAGTVGTRPDNS----M 159
Query: 234 ASLGINMHF 242
S+G++ F
Sbjct: 160 LSVGVSYRF 168
>gi|163749836|ref|ZP_02157081.1| outer membrane protein, putative [Shewanella benthica KT99]
gi|161330350|gb|EDQ01329.1| outer membrane protein, putative [Shewanella benthica KT99]
Length = 183
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 28/184 (15%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G ++ + D I +++ G G+ G+N + FGI A
Sbjct: 26 LGFYLGGQVNNTAIEDNIGTFDESAI---GFGVYGGYNF---NDSFGIEASIFATDSFVD 79
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ VV A DS+ Y G V S +
Sbjct: 80 EMDFRMAAMTISPVVRHA--FTDSVTAYLKAGLV-----------VNRTYSDDDDVDESY 126
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
G+ + G G+D + ++L Y + A ER D + + G+
Sbjct: 127 QGTGWLFGAGVDVTLTQSLALRVFYEI---------SETAPESDERDDDFADISLVQYGV 177
Query: 239 NMHF 242
+H+
Sbjct: 178 GLHY 181
>gi|83309701|ref|YP_419965.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
gi|82944542|dbj|BAE49406.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
Length = 378
Score = 35.9 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
F G + + L+ + D + G+ Y + ++ L A YRY
Sbjct: 152 FVGLGIGAARLDNGTVKKNGANAYSGDDWQFAYQGFAGVGYDLTDNVELKAQYRYFSTLD 211
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S A S+ ++D + H LG F
Sbjct: 212 YE---SKAASNNAKIDSEYRDHGLMLGFVYKF 240
>gi|332992205|gb|AEF02260.1| hypothetical protein ambt_03550 [Alteromonas sp. SN2]
Length = 560
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 8/108 (7%)
Query: 133 VLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
L+ YS + L Y +G + + E NS+N G + +GL+
Sbjct: 460 RLRRTYSFGTTLAYKLGSYMYLNSNITYANIEERSNSENIAT---GESDNWNASLGLERK 516
Query: 193 VNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINM 240
+ ++ S Y YI + S+ N
Sbjct: 517 IGRSLTTSIDYNYIEKSGDLNLGGQF-----GANYTDQRITLSIIYNY 559
>gi|238911494|ref|ZP_04655331.1| hypothetical protein SentesTe_10200 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 981
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 802 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 861
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 862 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 921
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 922 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 972
>gi|296447830|ref|ZP_06889743.1| porin opacity type [Methylosinus trichosporium OB3b]
gi|296254689|gb|EFH01803.1| porin opacity type [Methylosinus trichosporium OB3b]
Length = 284
Score = 35.9 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 54/207 (26%), Gaps = 12/207 (5%)
Query: 37 FNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHN 96
F+ + Y I ++G + + + AD S N
Sbjct: 65 FDPTKVVPAPLFESYSIGDSAFIGTGVGYQFNSWLRADITGEYRTASTYRATQSYTNLWN 124
Query: 97 IQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYV 156
V G A+ + + L Y G + Y GG G A
Sbjct: 125 DLCGGAVGGRCHDLYNAQHRAAVF-LANGYVDLGT--------WYGITPYVGGGVGFAVN 175
Query: 157 IDSSLEKVESDNSK-NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNN 215
++ + + + GL Y V ++ L YRY+ N
Sbjct: 176 FLQNMTDNGPETGGFGSATNRTQTNFAWAAMAGLGYNVTQNLKLEVGYRYLDMGRIKSNV 235
Query: 216 SNAKSDVERVDRKGN--AHIASLGINM 240
D + + AH LG
Sbjct: 236 IGCPVDCAGERQSFDLAAHDIRLGFRY 262
>gi|95930146|ref|ZP_01312885.1| OmpA-like transmembrane region [Desulfuromonas acetoxidans DSM 684]
gi|95133840|gb|EAT15500.1| OmpA-like transmembrane region [Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 35.9 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 20/187 (10%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG ++ +S G+ H I FV G + ++D
Sbjct: 30 GFYVGAAAVGSGVVVDSGGNTDKLDGDSNFSGGIYAGYKHRIFKGMFVAGEAFYHDTSQD 89
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
++ + + V GY DS +YG+ G ++ + ++N +
Sbjct: 90 ETFSDGDRLELDSQYGVKTHIGYEWDSWSVYGILGAAA----------LDYEITQNGEQT 139
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D H + +LG G Y N IS + I + N +
Sbjct: 140 SDDHFRA-LLGGGASYQYNEKISTNLEVTTCGDEISIAGDKNKTMGLV---------TLR 189
Query: 236 LGINMHF 242
LG++ HF
Sbjct: 190 LGVSYHF 196
>gi|121997100|ref|YP_001001887.1| hypothetical protein Hhal_0291 [Halorhodospira halophila SL1]
gi|121588505|gb|ABM61085.1| hypothetical protein Hhal_0291 [Halorhodospira halophila SL1]
Length = 249
Score = 35.9 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G+ + +L G G + A ++EK E+D + D + +GIG+ ++
Sbjct: 127 LGWHWEEVLA-GTGLYATAARERRNVEKCEADEDDACR---DDRRAGATVGIGVQRPLSD 182
Query: 196 DISLSASYRYIPHHIHSVNNSN 217
++ A Y Y +
Sbjct: 183 RWAVDAHYAYYLGMDDPDDAQE 204
>gi|293608448|ref|ZP_06690751.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829021|gb|EFF87383.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 428
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGI 238
+ +G G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 283 VAWGVGFGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGI 342
Query: 239 NMHF 242
F
Sbjct: 343 THQF 346
>gi|260548958|ref|ZP_05823180.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260408126|gb|EEX01597.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 444
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 16/186 (8%)
Query: 51 YGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHT 110
Y W + + + + N +P ++ + +L
Sbjct: 185 YNDWLFGQTTSNFLSTHAPEMIDFSTNVGGGTKRVP-----QVRYGYKLGPTT---QLFV 236
Query: 111 TAAKDDST--FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+A K DST + D YS+ L G+ S+ VE+
Sbjct: 237 SAEKGDSTALNGKQDANGSWLNDS---VKYSLPVLTAKITQGYADGKGSASARALVENYK 293
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
S + + + G D+ V+ + L A Y+ + SNA + D +
Sbjct: 294 SPTGNKD---NKTGWGIAAGTDFKVSDPLKLFADVSYVVGDSSYLYGSNAAYTLVNNDIE 350
Query: 229 GNAHIA 234
N +A
Sbjct: 351 QNKFVA 356
>gi|120437490|ref|YP_863176.1| TonB-dependent outer membrane receptor [Gramella forsetii KT0803]
gi|117579640|emb|CAL68109.1| TonB-dependent outer membrane receptor [Gramella forsetii KT0803]
Length = 910
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 33/192 (17%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPN-----GLGIELGHNIQLEDFVFGINCHTTAA 113
V ++ Y PL D + N+L PN G+ELG+ + + F +N + T+
Sbjct: 632 VFGNVGY-YSKQPLFDAVYVNFGNTLNPNLTNEQVFGLELGYGFRSQFFNANVNIYRTSW 690
Query: 114 KD-----DSTFYR-----LKEKYFIYGDVVLKAGYSVDSL----------LIYGMGGFGG 153
D +TF+R ++ + G + G D + +G +
Sbjct: 691 ADRFESESATFFRDTPEEIRGSANLLGITQVHKGIEFDFYGRVSNKFKWNAMLSLGDWEY 750
Query: 154 AYVIDSSLEKVESD---NSKNAKGRFDGHGSS----VVLGIGLDYMVNYDISLSASYRYI 206
+ ++ + + A DG G+DY + ++S+ A+YRY
Sbjct: 751 KDDVTATYFDDNQNPISGVEQAVLNLDGVKVGNAAQFTASAGVDYQIVDNLSVDATYRYA 810
Query: 207 PHHIHSVNNSNA 218
+ + ++A
Sbjct: 811 DNLYADYDATDA 822
>gi|288819069|ref|YP_003433417.1| long-chain fatty acid transport protein [Hydrogenobacter
thermophilus TK-6]
gi|288788469|dbj|BAI70216.1| long-chain fatty acid transport protein [Hydrogenobacter
thermophilus TK-6]
gi|308752652|gb|ADO46135.1| membrane protein involved in aromatic hydrocarbon degradation
[Hydrogenobacter thermophilus TK-6]
Length = 415
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 7/137 (5%)
Query: 70 HPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIY 129
P G+G ++G + DFVF + K +
Sbjct: 184 QPFTTNCWNAGGGQSQTYGIGAQVGIAYNMGDFVFA-----GLTYQSPVEMKYKRVFDSN 238
Query: 130 GDVVLK-AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
GD + + +G+G + + + F V+GIG
Sbjct: 239 GDGRFEDLKLTQPQEFAFGVGVKPMQNFKIGMDIRWINWKNAKGYKEF-QWKDQWVIGIG 297
Query: 189 LDYMVNYDISLSASYRY 205
+Y ++L A Y Y
Sbjct: 298 GEYKPTEKLALRAGYNY 314
>gi|222032170|emb|CAP74909.1| structural protein [Escherichia coli LF82]
gi|312944951|gb|ADR25778.1| Putative flagellin structural protein; putative exported protein
[Escherichia coli O83:H1 str. NRG 857C]
Length = 982
Score = 35.9 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 11/170 (6%)
Query: 58 YVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINCH 109
+V +S + + L+ T++ TY + G G++ G++ +L D +G
Sbjct: 804 FVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSG 863
Query: 110 TTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVESD 167
+ DD +K Y + + G Y Y + + +
Sbjct: 864 LFQSGDDYQLSNNMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNH 923
Query: 168 NSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
N N +G GS+V +G+G + + S Y+ + S
Sbjct: 924 NDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 973
>gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes]
Length = 350
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 30/191 (15%)
Query: 58 YVGLHISRLYETHP--LADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
Y G + +N G G G+ Q+ + G
Sbjct: 29 YAGGKLGWSQFHDTGWYNSNLNNNGPTHESQLGAGAFGGY--QVNPY-LGFEM------- 78
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE----SDNSKN 171
Y + G V + +S ++ + G+ +D +D+S +
Sbjct: 79 ---GYDWLGRMPYKG-VKVNGAFSSQAVQLTAKLGYPITDDLDIYTRLGGMVWRADSSNS 134
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
G G S V G+++ + DI+ Y+++ N +A + V + +
Sbjct: 135 IAGDNHDTGVSPVFAGGVEWAMTRDIATRLEYQWVN------NIGDAGT----VGVRPDN 184
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 185 GMLSVGVSYRF 195
>gi|322641993|gb|EFY38603.1| putative autotransporter/pertactin [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
Length = 307
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 128 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 187
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 188 GLFQSGDDYQLSNDMKVDGQSYDSMRYEIGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 247
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 248 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 298
>gi|70730191|ref|YP_259930.1| hypothetical protein PFL_2824 [Pseudomonas fluorescens Pf-5]
gi|68344490|gb|AAY92096.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 564
Score = 35.9 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 16/187 (8%)
Query: 61 LHISRLYETHPLADTINRKTYN-SLLPNGLGIELGHNIQLEDFVFGI----NCHTTAAKD 115
S A + + + G + L +I G+ A+K
Sbjct: 351 GQRSSPCAPWAGAPGCDTDGSRVAFMQKGNSVFLLRDITPNPATPGLTPQPQFVGLASKF 410
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
D L + D+ L++ + L Y G ++ S ++ ++ + +
Sbjct: 411 DVLDLNLAWDTELPDDLRLRSQTNFIRNLAYDKG-----EMLKRSEGEIVNNINSQGQFE 465
Query: 176 FDGHG--SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G+ LG L+ D +L A Y+YI +++ + + KG
Sbjct: 466 SGGNALMVQFTLGNALEMKKAGDWNLLAGYKYIQPDALPDGFNDSSFHLGGTNAKGYF-- 523
Query: 234 ASLGINM 240
LG N
Sbjct: 524 --LGGNY 528
>gi|293408517|ref|ZP_06652356.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471695|gb|EFF14178.1| conserved hypothetical protein [Escherichia coli B354]
Length = 982
Score = 35.9 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 11/170 (6%)
Query: 58 YVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINCH 109
+V +S + + L+ T++ TY + G G++ G++ +L D +G
Sbjct: 804 FVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSG 863
Query: 110 TTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVESD 167
+ DD +K Y + + G Y Y + + +
Sbjct: 864 LFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNH 923
Query: 168 NSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
N N +G GS+V +G+G + + S Y+ + S
Sbjct: 924 NDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 973
>gi|229522863|ref|ZP_04412277.1| hypothetical protein VIF_003431 [Vibrio cholerae TM 11079-80]
gi|229340080|gb|EEO05088.1| hypothetical protein VIF_003431 [Vibrio cholerae TM 11079-80]
Length = 182
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 16/152 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--------AKD 115
+ L+ +R S + G+N Q F+ G++ +
Sbjct: 21 GNSPYSFSLSTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEMLNT 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+K + F +G + + ++Y GG V + DN +
Sbjct: 80 QKQKIDVKVEGFYFGAFFEQP--INNLTILYARGGLSQFKVKERYELGAIDDN-----RQ 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G + +G + ++ ++L+ Y P
Sbjct: 133 FSGTNPYIGIGTKVQSSIDKSLALTMELSYYP 164
>gi|161615450|ref|YP_001589415.1| hypothetical protein SPAB_03221 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364814|gb|ABX68582.1| hypothetical protein SPAB_03221 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 992
Score = 35.9 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 813 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 872
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 873 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 932
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G GS+V +G+G + + S Y+ + S
Sbjct: 933 DADVNGDSIDNGVEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 983
>gi|126641426|ref|YP_001084410.1| putative protein (DcaP-like) [Acinetobacter baumannii ATCC 17978]
Length = 443
Score = 35.9 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 300 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITH 359
Query: 241 HF 242
F
Sbjct: 360 QF 361
>gi|296104776|ref|YP_003614922.1| Opacity protein and surface antigens-like protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059235|gb|ADF63973.1| Opacity protein and surface antigens-like protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 227
Score = 35.5 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 8/102 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G G + + + N+ + LG G+ Y + + YR
Sbjct: 130 VYGTAGLGVSKIKAGGWQG----NAGREYASTTQSNLTYALGAGVSYTPVERLYVDLGYR 185
Query: 205 YIPHHIHSVNNSNAKSDVERVDRKGNAHIAS----LGINMHF 242
YI +N + D + AHI S LG+ F
Sbjct: 186 YIDMGKIESGYNNFTNARGLKDEQMKAHIVSNEFTLGMRYVF 227
>gi|294788472|ref|ZP_06753715.1| hypothetical protein HMPREF9021_00863 [Simonsiella muelleri ATCC
29453]
gi|294483903|gb|EFG31587.1| hypothetical protein HMPREF9021_00863 [Simonsiella muelleri ATCC
29453]
Length = 348
Score = 35.5 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 26/184 (14%)
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDST 118
+G+H + NR YN G ++G +Q +V G + K+
Sbjct: 190 IGMHTEHMDANGKQPAFYNRGIYNDSSRTVTG-QVGVGLQFNPYV-GGEVYFEGGKNK-- 245
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDG 178
+ V + + S LI G + + + F
Sbjct: 246 --KYTSTTGTEQKVNRRV---LGSRLILGT------NADAKVRIFTKVGVAAVHQDDF-- 292
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
V G+G Y + S+ Y + N + R +H LG+
Sbjct: 293 -HPQWVWGLGSSYKITDKTSIRVDYDH--------NIKRSPHVYYDNMRFSKSHYFGLGL 343
Query: 239 NMHF 242
HF
Sbjct: 344 QHHF 347
>gi|239503657|ref|ZP_04662967.1| putative protein (DcaP-like) [Acinetobacter baumannii AB900]
gi|193077049|gb|ABO11808.2| putative protein (DcaP-like) [Acinetobacter baumannii ATCC 17978]
Length = 428
Score = 35.5 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 285 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITH 344
Query: 241 HF 242
F
Sbjct: 345 QF 346
>gi|184157735|ref|YP_001846074.1| putative DcaP-like protein [Acinetobacter baumannii ACICU]
gi|183209329|gb|ACC56727.1| putative DcaP-like protein [Acinetobacter baumannii ACICU]
gi|322508042|gb|ADX03496.1| putative DcaP-like protein [Acinetobacter baumannii 1656-2]
gi|323517628|gb|ADX92009.1| putative protein (DcaP-like) [Acinetobacter baumannii TCDC-AB0715]
Length = 428
Score = 35.5 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 285 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITH 344
Query: 241 HF 242
F
Sbjct: 345 QF 346
>gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 387
Score = 35.5 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 64/204 (31%), Gaps = 36/204 (17%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLL---------PNGLGIELGHNIQLEDFVFGI 106
G Y G ++ R T A + + L +G I G+ V G
Sbjct: 34 GWYAGANVGRSSATIDDARITSGLLGSGLTTTSITDDNRSSGYKIFGGYQFNRNFAVEGG 93
Query: 107 NCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLI--------YGMGGFGGAYVID 158
++ + G++ LK G ++D L+ + + G G D
Sbjct: 94 YFDLGNFGFNANTVP---TGTLSGNIKLK-GLNLD--LVGTLPISEKFSVLGRIGVNYAD 147
Query: 159 SSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNA 218
++ + +++ +G+GL Y +++ A +
Sbjct: 148 AADSFAGTGAVNVLNPSPSKRETNLKVGVGLQYAFTDALAMRAEIERYRIND-------- 199
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
V KG+ + SLG+ F
Sbjct: 200 -----AVGNKGDIDLVSLGLIYRF 218
>gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 361
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 69/191 (36%), Gaps = 32/191 (16%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAA 113
+G Y + +P+ + + N LG ELG++ G + +
Sbjct: 42 TGFY--GNGYTGVNNNPIKSKLGAGAFVGYQANPYLGFELGYDW------LGRMKYAGST 93
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSV--DSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
+ + K + + K Y V D + +GG +++ + +N
Sbjct: 94 SNVADSASFKAQGI---QLAAKLSYPVLPDLDVYTRLGGMVWRADSHAAIGGGDINN--- 147
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
D G S + IG++Y ++ + + Y+++ N +A + R D
Sbjct: 148 -----DDTGVSPLAAIGVEYAIDKNWATRVDYQWVS------NIGDAGTVGARPDNM--- 193
Query: 232 HIASLGINMHF 242
+ S+G++ F
Sbjct: 194 -LMSVGLSYRF 203
>gi|254511012|ref|ZP_05123079.1| putative outer membrane protein [Rhodobacteraceae bacterium KLH11]
gi|221534723|gb|EEE37711.1| putative outer membrane protein [Rhodobacteraceae bacterium KLH11]
Length = 238
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 55/162 (33%), Gaps = 16/162 (9%)
Query: 83 SLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYS--V 140
G+E+G++ FG +T + + + + LK G +
Sbjct: 91 GGREYVYGVEIGYD-------FGTLDDSTTTQIGTAVASGRSAISDVFSLRLKNGLTNRR 143
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
++L + G+ + S+ ++ + + + +G ++ +N + S++
Sbjct: 144 GNILYFATVGYVRGDITTSAS---LTELTGTMRFEEVDRREGFSVSLGAEHQLNENWSIT 200
Query: 201 ASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+ +V+ + + +G+N F
Sbjct: 201 GEIEYLQFESETVDLG----PMFSTKSTPSYRGFRIGLNYTF 238
>gi|152992453|ref|YP_001358174.1| hypothetical protein SUN_0859 [Sulfurovum sp. NBC37-1]
gi|151424314|dbj|BAF71817.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 222
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 38/204 (18%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNS-------LLPNGLGIELGHNIQLEDFVFGIN 107
S YVGL S L + + + +++G+ Q ++ +
Sbjct: 41 SAFYVGLGYSYLSSNRTAKLNKPGDPRHGQVVKDTDSNADNILLQVGY--QFNPYLA-LE 97
Query: 108 CHTTAAKDDSTF-----YRLKEKYFI---YGDVVLKAGYSVDSLLIYGMGGFGGAYVIDS 159
T + D + +KE I + +K Y + IYG+ G+G
Sbjct: 98 GRYTFSVGDHSLTHNHLGGIKEDVDIDISNMALYIKPMYPIGDFSIYGLLGYG------- 150
Query: 160 SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNA 218
KVE + + +DG G G G+ Y + D S+ Y R+
Sbjct: 151 ---KVERERHEEPYRSWDGSGFQW--GAGVQYAIGDDFSVFVDYTRWYDEEGEP------ 199
Query: 219 KSDVERVDRKGNAHIASLGINMHF 242
+ R+ + + S+GI+ F
Sbjct: 200 HERLPRL-LDTDFSVLSVGISYRF 222
>gi|153207702|ref|ZP_01946349.1| conserved domain protein [Coxiella burnetii 'MSU Goat Q177']
gi|165924204|ref|ZP_02220036.1| conserved domain protein [Coxiella burnetii RSA 334]
gi|212219010|ref|YP_002305797.1| hypothetical exported membrane spanning protein [Coxiella burnetii
CbuK_Q154]
gi|120576398|gb|EAX33022.1| conserved domain protein [Coxiella burnetii 'MSU Goat Q177']
gi|165916353|gb|EDR34957.1| conserved domain protein [Coxiella burnetii RSA 334]
gi|212013272|gb|ACJ20652.1| hypothetical exported membrane spanning protein [Coxiella burnetii
CbuK_Q154]
Length = 259
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 71/215 (33%), Gaps = 35/215 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHT 110
+ G Y+G T P+ +++ Y + G +G + G+
Sbjct: 54 FEYQGTYLGGSF-----TVPIGSNVHQNGYTA------GGHIGLRYYFLNPWFLGLEFAA 102
Query: 111 TAAKDDSTFYRL---------------KEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGA 154
+++T + + D+ + G ++ +Y GG A
Sbjct: 103 MGNSENATTAESVLAPSPDDLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYA 162
Query: 155 YV--IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ I + + + + + ++G GL Y + Y Y +
Sbjct: 163 RIRHILTVFNPATLTPTISLQRTTHKNRWGFLVGFGLGYDFCPWFGIFTEYNYYDYGRVG 222
Query: 213 VNN-----SNAKSDVERVDRKGNAHIASLGINMHF 242
+++ N +D + + +A+ LG+N++F
Sbjct: 223 LDSLSNIRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|307610344|emb|CBW99912.1| hypothetical protein LPW_16701 [Legionella pneumophila 130b]
Length = 254
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 28/215 (13%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
NE + + D ++ W G+ +G I YE +G+E N
Sbjct: 57 NETSQELNFTDFDHFDWHGSGLGGEIYLGYEKFFRTHYY------------IGLEGFFNR 104
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRL---KEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGG 153
+ + R+ K + ++ G + S+ +IYG G+
Sbjct: 105 SSN------EGKIYFFDSNELYSRILKGSFKQKWQSGLAIRPGIYLPSVGIIYGRVGWIV 158
Query: 154 AYVIDS-SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IP 207
+ V S S+ + S + + + V LG GL+ + + + +
Sbjct: 159 SDVNLSGSITQSGPFGSFSGRFSNTKKKNGVQLGTGLELELTKNWRCRVEWDWNRLQDFI 218
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++N + R+ + LG+N F
Sbjct: 219 FDSQGRDSNNHRYQTTRIAKHPILEQFKLGLNWRF 253
>gi|260555399|ref|ZP_05827620.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|260411941|gb|EEX05238.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
Length = 428
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 285 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNIHSNEFDTVSLGITH 344
Query: 241 HF 242
F
Sbjct: 345 QF 346
>gi|212633150|ref|YP_002309675.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3]
gi|212554634|gb|ACJ27088.1| OmpA-like transmembrane region [Shewanella piezotolerans WP3]
Length = 184
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 30/187 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G Y G I + G G+N ++ FG+ D
Sbjct: 28 GAYAGGQIGAFSADLEGGSESGQS---------YGAYGGYN--FNEW-FGLEGALYLTND 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ D+ +YG G A ++ ++A
Sbjct: 76 FIDEGEATANALSFSAAPKFTWVINDTFSLYGKVGIASAAIVI-----------ESALPD 124
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D G + G G++ + +++ Y ++ + S + +DVE +
Sbjct: 125 IDYTGVGLTYGAGVNAAITEKLTVRLGYDFMSATLESDDFDLPDADVE-------FSNVT 177
Query: 236 LGINMHF 242
LG++ F
Sbjct: 178 LGMHYQF 184
>gi|149278636|ref|ZP_01884772.1| putative outer membrane protein [Pedobacter sp. BAL39]
gi|149230631|gb|EDM36014.1| putative outer membrane protein [Pedobacter sp. BAL39]
Length = 1210
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 69 THPLADTINRKTYNSLLPNGLGIELGHN---IQLEDFVFGINCHTTAAKDDSTFYRLKEK 125
A N TYN+ G G+E N ++ D+ + + + + ++ T R K
Sbjct: 919 PINSAYGFNSLTYNAGDMKGHGVEFALNGVLLRKNDWEWSADFNVSYNTNEVTDTRFPAK 978
Query: 126 YFIYGDVVLKAGYSVDSLLIYGMGGF 151
G V+ +GY VD+L +Y G
Sbjct: 979 IATVGMPVITSGYPVDNLFVYRWAGL 1004
>gi|169796330|ref|YP_001714123.1| hypothetical protein ABAYE2284 [Acinetobacter baumannii AYE]
gi|215483791|ref|YP_002326016.1| hypothetical protein ABBFA_002114 [Acinetobacter baumannii
AB307-0294]
gi|301510609|ref|ZP_07235846.1| hypothetical protein AbauAB05_03499 [Acinetobacter baumannii AB058]
gi|301595035|ref|ZP_07240043.1| hypothetical protein AbauAB059_04476 [Acinetobacter baumannii
AB059]
gi|169149257|emb|CAM87140.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|213986788|gb|ACJ57087.1| hypothetical protein ABBFA_002114 [Acinetobacter baumannii
AB307-0294]
Length = 428
Score = 35.5 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 285 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITH 344
Query: 241 HF 242
F
Sbjct: 345 QF 346
>gi|329755866|gb|AEC04330.1| outer membrane protein A [Pasteurella multocida]
Length = 359
Score = 35.5 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 18/198 (9%)
Query: 54 WSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA- 112
W+ + GL+ ++ E + G+ G+ I ++F +
Sbjct: 36 WASFHDGLNQAKYLEAPEAPEAPEATFGFKRNSVTYGVFGGYQI-TDNFAVELGYDDFGR 94
Query: 113 ----AKDDSTFYRLKEKYFIYGD-VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVES 166
+ + K+ +G + LKA Y V D L IY G + +
Sbjct: 95 AKLRMAEKDQKAKDAAKHTNHGAHLSLKASYPVLDGLDIYARVGAALIRSDYKVYDHSDP 154
Query: 167 DNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHSVNNSNAKSDVER 224
K S V GL+Y +++L Y+++ + V ER
Sbjct: 155 AKLPQFKRTHS-TQVSPVFAGGLEYAFMPELALPVEYQWVNNVGQVKDVLG-------ER 206
Query: 225 VDRKGNAHIASLGINMHF 242
VD + + + G++ F
Sbjct: 207 VDYRPDIGSVTAGLSYRF 224
>gi|269137603|ref|YP_003294303.1| hypothetical protein ETAE_0245 [Edwardsiella tarda EIB202]
gi|267983263|gb|ACY83092.1| hypothetical protein ETAE_0245 [Edwardsiella tarda EIB202]
gi|304557672|gb|ADM40336.1| porin opacity type [Edwardsiella tarda FL6-60]
Length = 210
Score = 35.5 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 25/198 (12%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPN--GLGIELGHNIQLEDFVFGINCHTTA 112
+G Y G + E +N ++ G+ G+N + F +
Sbjct: 28 TGYYAGAKMGISAEHLFDQKDVNGNGMSNDNKGVGNAGLVFGYNFE-NQFSLPVRAELDY 86
Query: 113 A-KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG-------GFGGAYVIDSSLEKV 164
+ ++T + + V+ G G G Y S +
Sbjct: 87 TFRANATSSHTNDAAETNDSRLGLQTLMVNGYYDIKTGTPFTPYVGAGIGYANVSLKNDM 146
Query: 165 ESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
DN ++ F + +G G+ Y VN + L Y+Y+ S NS AK
Sbjct: 147 NGDNVQSNSNNF-----AWSVGTGVIYNVNERLDLDLGYKYLDAGKASAGNSQAKVT--- 198
Query: 225 VDRKGNAHIASLGINMHF 242
H +LG+N +F
Sbjct: 199 ------THDVTLGVNYYF 210
>gi|29654705|ref|NP_820397.1| hypothetical exported membrane spanning protein [Coxiella burnetii
RSA 493]
gi|81628755|sp|Q83BT9|Y1413_COXBU RecName: Full=Uncharacterized protein CBU_1413; Flags: Precursor
gi|29541973|gb|AAO90911.1| hypothetical exported membrane spanning protein [Coxiella burnetii
RSA 493]
Length = 259
Score = 35.5 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 71/215 (33%), Gaps = 35/215 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHT 110
+ G Y+G T P+ +++ Y + G +G + G+
Sbjct: 54 FEYQGTYLGGSF-----TVPIGSNVHQNGYTA------GGHIGLRYYFSNPWFLGLEFAA 102
Query: 111 TAAKDDSTFYRL---------------KEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGA 154
+++T + + D+ + G ++ +Y GG A
Sbjct: 103 MGNSENATTAESVLAPSPDDLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYA 162
Query: 155 YV--IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ I + + + + + ++G GL Y + Y Y +
Sbjct: 163 RIRHILTVFNPATLTPTISLQRTTHKNRWGFLVGFGLGYDFCPWFGIFTEYNYYDYGRVG 222
Query: 213 VNN-----SNAKSDVERVDRKGNAHIASLGINMHF 242
+++ N +D + + +A+ LG+N++F
Sbjct: 223 LDSLSNIRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|213156934|ref|YP_002318979.1| hypothetical protein AB57_1605 [Acinetobacter baumannii AB0057]
gi|301347077|ref|ZP_07227818.1| hypothetical protein AbauAB0_12538 [Acinetobacter baumannii AB056]
gi|213056094|gb|ACJ40996.1| hypothetical protein AB57_1605 [Acinetobacter baumannii AB0057]
Length = 427
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 183 VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGINM 240
+G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 284 WGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITH 343
Query: 241 HF 242
F
Sbjct: 344 QF 345
>gi|145639315|ref|ZP_01794921.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
gi|145271618|gb|EDK11529.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
Length = 361
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 67/208 (32%), Gaps = 35/208 (16%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G+ + D IN ++ + LG + + F +G+ D
Sbjct: 28 FYAGVKAGQA----SFHDGINNNG--AIKKDLLGGLASYGYRRNTFTYGVFGGYQILNQD 81
Query: 117 STFYRLKEKYFIYGDVVLKA-------------------GYSV-DSLLIYGMGGFGGAYV 156
+ + Y +G L+ Y V D L +YG G
Sbjct: 82 NFGLAAELGYDNFGRAKLRLEGKPKAKHTNHGAHLSLKGSYEVLDGLDVYGKAGVALVRS 141
Query: 157 IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP--HHIHSVN 214
+ +++ +++ K +S + +G +Y V ++++ Y+++ +
Sbjct: 142 DYKFYD--DANGTRDHKKGRHTARASGLFAVGAEYAVLPELAVRLEYQWLTRVGKYRPQD 199
Query: 215 NSNAKSDVERVDRKGNAHIASLGINMHF 242
N ++ + GI+ F
Sbjct: 200 KPN-----TAINYNPWIGSINAGISYRF 222
>gi|152992483|ref|YP_001358204.1| hypothetical protein SUN_0889 [Sulfurovum sp. NBC37-1]
gi|151424344|dbj|BAF71847.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 212
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 73/188 (38%), Gaps = 16/188 (8%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAK 114
+G YVGL + ++ ++ Y + +G ++ G+ + ++ + K
Sbjct: 41 AGFYVGLAYAAVHNEVAIS----NGRYGDVDYHGYMLQAGY--KFNPYIA-VEARYWDTK 93
Query: 115 DDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
DD ++ + G L A D+ +Y + +D + + + G
Sbjct: 94 DD----KITTTHPTGGTRTLDA--QFDAWGVYLKPMYPVTEALDV-YVLLGWGHQDSQHG 146
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
++ SS G G Y + +IS+ A Y I N N ++ VD + ++
Sbjct: 147 PYNPKDSSFSWGGGASYSLTENISVFADYVRIYDDTAIKGNVNPFGEIIDVDVESSS--W 204
Query: 235 SLGINMHF 242
++G++ F
Sbjct: 205 NIGLSYKF 212
>gi|4140005|pdb|1BXW|A Chain A, Outer Membrane Protein A (Ompa) Transmembrane Domain
Length = 172
Score = 35.5 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 62/188 (32%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 9 YTGAKLG--WSQYHDTGLINNNGPTHENKLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 63
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L IY G D N G
Sbjct: 64 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRA----------DTYSNVYG 113
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 114 KNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 163
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 164 SLGVSYRF 171
>gi|289669429|ref|ZP_06490504.1| membrane protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 124
Score = 35.5 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 22/124 (17%)
Query: 132 VVLKAGYSVDS---LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIG 188
+ + GY++ L Y G S +++ ++ G GIG
Sbjct: 1 MRGRIGYALGEHGDYLAYVTAGVARGEFDHSFNSSNTANSFTSSGGD---SADGYQAGIG 57
Query: 189 LDYMVNYDISLSASYRY----------------IPHHIHSVNNSNAKSDVERVDRKGNAH 232
L ++ ++S+ Y + P + + A +D+ R D + +
Sbjct: 58 LQRWLSDNVSVGVEYLFTRLQDDATRVRVGPGTAPATNPFLRMNPAGTDLRRTDTDFSTN 117
Query: 233 IASL 236
+ L
Sbjct: 118 VVRL 121
>gi|213022277|ref|ZP_03336724.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
Length = 513
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 334 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 393
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 394 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 453
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G G +V +G+G + + S Y+ + S
Sbjct: 454 DADVNGDSIDNGVEGFAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 504
>gi|308271281|emb|CBX27889.1| hypothetical protein N47_G32130 [uncultured Desulfobacterium sp.]
Length = 403
Score = 35.5 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 16/126 (12%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMG 149
GI LG+++ +GI D Y +GY IY +
Sbjct: 56 GINLGYDLTKN---WGIEGSFNYIDSDRKGYSDSSV----------SGYLYKMDGIYNIT 102
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
FG ++ + N G+ V G GL Y + +I+L R++
Sbjct: 103 NFGKLVPYLAA---GAGGITLNPADGDTGNNFLVNYGAGLKYFLTDNIALRGDVRHVIPL 159
Query: 210 IHSVNN 215
S NN
Sbjct: 160 NESNNN 165
>gi|332142706|ref|YP_004428444.1| putative outer membrane protein A [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552728|gb|AEA99446.1| putative outer membrane protein A [Alteromonas macleodii str. 'Deep
ecotype']
Length = 198
Score = 35.5 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG----LGIELGHNIQLEDFVFGINCHT 110
SG YVG + L ++ + L+ + IE G+ + D+
Sbjct: 37 SGFYVGGNYGYLRVEGEDDFDDDKDVWQGLVGYKFNEWVAIEGGY-VDFGDY----GNDI 91
Query: 111 TAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSK 170
A+ D +K + + +Y G + + + V DN
Sbjct: 92 AGAETDGYTAAIKGILPL-----------TERFSLYAKAGQLWSET-EYNFAGVSRDNDD 139
Query: 171 NAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGN 230
+ +G GL Y V + ++A Y ++ A D++ D + +
Sbjct: 140 ESL----------FVGAGLSYAVTSNFLVNAEYTVYD---TELDADEAFDDIDDTDFETD 186
Query: 231 AHIASLGINMHF 242
AS+G+ F
Sbjct: 187 LKQASIGVEYRF 198
>gi|66934588|gb|AAY58303.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 35.5 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 11/111 (9%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 4 IALISTSAAQAADIVVPHEVVSPRVTPI----VSPSTFSWTGFYLGGQVGNFSSKVEITD 59
Query: 75 TINRKTYNSLL----PNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
+ + + P+G G+ G NI L + + G+ A T
Sbjct: 60 SGKKNEFFGKDQTPKPSGFMGGVYTGSNIDLGNNLILGVETDAVWADRGDT 110
>gi|293396726|ref|ZP_06641002.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291420990|gb|EFE94243.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 364
Score = 35.5 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 42/229 (18%), Positives = 73/229 (31%), Gaps = 35/229 (15%)
Query: 20 PNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNY-VGLHISRLYETHPLADTINR 78
+LAV L + DN + WS + VG + + + T
Sbjct: 10 TAIALAVALAGFATVAQAAPKDN--TWYTGAKLGWSQYHDVGFYGNGYEKGIGNGPTHES 67
Query: 79 K-TYNSLLPNG----LGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVV 133
+ + L LG ELG++ L + + + A K K Y I
Sbjct: 68 QLGAGAFLGYQANQYLGFELGYDW-LGRMPYKGSVNNGAFKAQGVQLAAKLSYPI----- 121
Query: 134 LKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMV 193
D L IY G + + N G S + +G++Y +
Sbjct: 122 ------ADDLDIYTRLGGMIWRADSKANYGRTGERLSNHDT-----GVSPLAAVGVEYAL 170
Query: 194 NYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ + Y+++ N +A + R D + SLG++ F
Sbjct: 171 TKNWATRLDYQFVS------NIGDAGTVGARPDNT----MLSLGVSYRF 209
>gi|262278715|ref|ZP_06056500.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259066|gb|EEY77799.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 428
Score = 35.5 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 181 SSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDR--KGNAHIASLGI 238
+ +G+G Y + D L A Y ++ + SN+ ++ + SLGI
Sbjct: 283 VAWGVGLGGKYQITPDTLLKADYYHVKGDGRFLLWSNSGYVIDDQNNMHSNEFDTVSLGI 342
Query: 239 NMHF 242
F
Sbjct: 343 THQF 346
>gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 35.5 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 16/194 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRK---TYNSLLPNGLGIELGHNIQLEDFV---FGINCHT 110
YVG L + + G+ G+ I V +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYKSKTSFGSKRNSVTYGVFGGYQITDNFAVELGYDDFGRA 87
Query: 111 TAAKDDSTFYRLKEKYFIYGD-VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ T K+ +G + LKA Y +D L +Y GA +I S +
Sbjct: 88 KVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYAR---VGAALIRSDYKLYAPLI 144
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+K F S V GL+Y +++L Y+++ +D + D +
Sbjct: 145 NKRLSPHFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-----NVGKFEYADGQYADFR 199
Query: 229 GNAHIASLGINMHF 242
+ + G++ F
Sbjct: 200 PDIGSVTAGLSYRF 213
>gi|52425273|ref|YP_088410.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307325|gb|AAU37825.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 368
Score = 35.5 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 66/199 (33%), Gaps = 19/199 (9%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT----A 112
Y G + G+ G+ I G+
Sbjct: 38 FYAGAKAGWASFHDGYTQYAEDGVGSHTKSVTYGVFGGYQI-FNRDNLGLAVELGYDDFG 96
Query: 113 AKDDSTFYRLKEKYFIYGD-VVLKAGYSVDSLLIYGMG----GFGGAYVIDSSLEKVESD 167
T K+ +G + LK Y + +L G G GA ++ S + +
Sbjct: 97 RAALRTNGATSAKHTNHGAHLSLKPSYDLGALAPVLSGLDVYGKVGAALVRSDYKVNDGY 156
Query: 168 NSKNAKGRFDGHG--SSVVLGIGLDYMVN--YDISLSASYRYIPHHIHSVNNSNAKSDVE 223
+ K F H +S++LG GL+Y + +++ Y+++ + + N+N
Sbjct: 157 SYGFNKSDFADHSLKTSLLLGAGLEYALPSLPELAFRLEYQWLN-KVGKLENANG----T 211
Query: 224 RVDRKGNAHIASLGINMHF 242
R D H + G++ F
Sbjct: 212 RFDYTPEIHSVTAGVSYRF 230
>gi|189466586|ref|ZP_03015371.1| hypothetical protein BACINT_02961 [Bacteroides intestinalis DSM
17393]
gi|189434850|gb|EDV03835.1| hypothetical protein BACINT_02961 [Bacteroides intestinalis DSM
17393]
Length = 1118
Score = 35.5 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 30/77 (38%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G + + + K ++ L
Sbjct: 741 DWLTDLKIRASYGVNGTLPTDYFGYRGLSSLTNGYLEQPGIIQSQLKNDDLQWETNYNLN 800
Query: 187 IGLDYMVNYDISLSASY 203
+GLD+ + ++++ Y
Sbjct: 801 LGLDFSLWNRLNVTLEY 817
>gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 35.5 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 16/194 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRK---TYNSLLPNGLGIELGHNIQLEDFV---FGINCHT 110
YVG L + + G+ G+ I V +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYKSKTSFGSKRNSVTYGVFGGYQITDNFAVELGYDDFGRA 87
Query: 111 TAAKDDSTFYRLKEKYFIYGD-VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ T K+ +G + LKA Y +D L +Y GA +I S +
Sbjct: 88 KVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYAR---VGAALIRSDYKLYAPLI 144
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+K F S V GL+Y +++L Y+++ +D + D +
Sbjct: 145 NKRLSPHFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-----NVGKFEYADGQYADFR 199
Query: 229 GNAHIASLGINMHF 242
+ + G++ F
Sbjct: 200 PDIGSVTAGLSYRF 213
>gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida]
gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida]
gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida]
gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 35.5 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 16/194 (8%)
Query: 57 NYVGLHISRLYETHPLADTINRK---TYNSLLPNGLGIELGHNIQLEDFV---FGINCHT 110
YVG L + + G+ G+ I V +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYKSKTSFGSKRNSVTYGVFGGYQITDNFAVELGYDDFGRA 87
Query: 111 TAAKDDSTFYRLKEKYFIYGD-VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ T K+ +G + LKA Y +D L +Y GA +I S +
Sbjct: 88 KVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYAR---VGAALIRSDYKLYAPLI 144
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+K F S V GL+Y +++L Y+++ +D + D +
Sbjct: 145 NKRLSPHFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-----NVGKFEYADGQYADFR 199
Query: 229 GNAHIASLGINMHF 242
+ + G++ F
Sbjct: 200 PDIGSVTAGLSYRF 213
>gi|262192115|ref|ZP_06050277.1| hypothetical protein VIH_002497 [Vibrio cholerae CT 5369-93]
gi|262032026|gb|EEY50602.1| hypothetical protein VIH_002497 [Vibrio cholerae CT 5369-93]
Length = 182
Score = 35.5 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 16/152 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--------AKD 115
+ L +R S + G+N Q F+ G++ +
Sbjct: 21 GNSPYSFSLNTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEMLNT 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+K + F +G + + ++Y GG V + DN +
Sbjct: 80 QKQKIDVKVEGFYFGAFFEQP--INNLTILYARGGLSQFKVKERYELGAIGDN-----RQ 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G + +G + ++ ++L+ Y P
Sbjct: 133 FSGTNPYIGIGTKVQSSIDKSLALTMELSYYP 164
>gi|37624552|gb|AAQ96072.1| outer membrane protein II [Escherichia coli]
gi|37624556|gb|AAQ96074.1| outer membrane protein II [Escherichia coli]
gi|37624558|gb|AAQ96075.1| outer membrane protein II [Escherichia coli]
gi|37624560|gb|AAQ96076.1| outer membrane protein II [Escherichia coli]
Length = 157
Score = 35.5 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERV 225
+D N G+ G S V G++Y + +I+ Y++ + N +A + R
Sbjct: 16 ADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRP 69
Query: 226 DRKGNAHIASLGINMHF 242
D + SLG++ F
Sbjct: 70 DN----GMLSLGVSYRF 82
>gi|261856832|ref|YP_003264115.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837301|gb|ACX97068.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 373
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 58/200 (29%), Gaps = 26/200 (13%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIE---LGHNIQLEDFVFGINCHTT 111
SG Y+G + + T + N L + +G+ + + F
Sbjct: 33 SGWYIGANAGQSRATIDNDRITRNLLGSGFTTNALTNDDRSIGYKL-YGGYQFNRYFALE 91
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKA---GYSVDSLLI------YGMGGFGGAYVIDSSLE 162
+ + G + + G ++D + + + + G G + +
Sbjct: 92 GGYFNLGKFGYTAYTTPQGTLTGEIKLQGVNLDVVGLWPITDKFSLFGRVGVNYAKAQDQ 151
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
V + ++ G+G+ Y + + + A +
Sbjct: 152 FVGTGAVLVTNPSPSARDTNYKFGVGVQYALTESLDVRAEVERYRIND------------ 199
Query: 223 ERVDRKGNAHIASLGINMHF 242
V KG+ + S G+ F
Sbjct: 200 -AVGNKGDIDLISAGLVYRF 218
>gi|237727625|ref|ZP_04558106.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229434481|gb|EEO44558.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 1129
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISGGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASY 203
IGLD+ ++ + Y
Sbjct: 811 IGLDFGFWDRLNFTIEY 827
>gi|212694389|ref|ZP_03302517.1| hypothetical protein BACDOR_03916 [Bacteroides dorei DSM 17855]
gi|212662890|gb|EEB23464.1| hypothetical protein BACDOR_03916 [Bacteroides dorei DSM 17855]
Length = 1129
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISGGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASY 203
IGLD+ ++ + Y
Sbjct: 811 IGLDFGFWDRLNFTIEY 827
>gi|153825053|ref|ZP_01977720.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741378|gb|EDM55412.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 182
Score = 35.5 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 16/152 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--------AKD 115
+ L+ +R S + G+N Q F+ G++ +
Sbjct: 21 GNSPYSFSLSTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEMLNT 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+K + F +G + + ++Y GG V + DN +
Sbjct: 80 QEQKIDVKVEGFYFGAFFEQP--INNLTILYARGGLSQFKVKERYELGAIGDN-----RQ 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G + +G + ++ ++L+ Y P
Sbjct: 133 FSGTNPYIGIGTKVQSSIDKSLALTMELSYYP 164
>gi|293394381|ref|ZP_06638681.1| attachment invasion locus protein [Serratia odorifera DSM 4582]
gi|291423359|gb|EFE96588.1| attachment invasion locus protein [Serratia odorifera DSM 4582]
Length = 231
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 13/131 (9%)
Query: 90 GIELGHNIQLEDFVFGINCHTTAAKDDSTFY----RLKEKYFIYGDVVLKAGYSVDSLL- 144
G+ + + +D ++GI T +Y ++ + F Y + Y + +
Sbjct: 100 GVNAKYRYEFDD-LWGIIGSFTYTNLSYDYYDGGDKVGDSDFDYYSLTAGPSYRFNDYVS 158
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG+ G + S+ S+ + D +SV G+GL + + ASY
Sbjct: 159 VYGLLGLAHGKIKSSAY-------SRYYEAEGDESKTSVAYGVGLQVNPWPNWIIDASYE 211
Query: 205 YIPHHIHSVNN 215
Y +
Sbjct: 212 YSKLDDAKIGT 222
>gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida]
Length = 348
Score = 35.2 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 16/194 (8%)
Query: 57 NYVGLHISRLYETHPLA---DTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGINCHT 110
YVG L + G+ G+ I V +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYVSKTSFGSKRNSVTYGVFGGYQITDNFAVELGYDDFGRA 87
Query: 111 TAAKDDSTFYRLKEKYFIYGD-VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ T K+ +G + LKA Y +D L +Y GA +I S +
Sbjct: 88 KVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYAR---VGAALIRSDYKLYAPLI 144
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+K F S V GL+Y +++L Y+++ +D + D +
Sbjct: 145 NKRLSPHFKITQVSPVFAGGLEYAFIPELTLRVEYQWVN-----NVGKFEYADGQYADFR 199
Query: 229 GNAHIASLGINMHF 242
+ + G++ F
Sbjct: 200 PDIGSVTAGLSYRF 213
>gi|265750924|ref|ZP_06086987.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263237820|gb|EEZ23270.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 1129
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISDGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASY 203
IGLD+ ++ + Y
Sbjct: 811 IGLDFGFWDRLNFTIEY 827
>gi|237710124|ref|ZP_04540605.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229455586|gb|EEO61307.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 1129
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%)
Query: 127 FIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLG 186
D+ ++A Y V+ L G+ G I + ++ +
Sbjct: 751 DWLTDLRIRASYGVNGTLPSDYFGYMGLSSISGGYLEQPGIQMSQIANPNLKWETNYNMN 810
Query: 187 IGLDYMVNYDISLSASY 203
IGLD+ ++ + Y
Sbjct: 811 IGLDFGFWDRLNFTIEY 827
>gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1]
gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1]
Length = 342
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 22/187 (11%), Positives = 59/187 (31%), Gaps = 31/187 (16%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + ++ + + + LG+ Q+ ++
Sbjct: 33 YAGAGLGQGHYSNGSNPQSYDSVRDRFAGS---VYLGY--QVNPYLA-PELSYQFLGSAY 86
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
Y E+ I GD +++ G+ + ++ + +++G
Sbjct: 87 ANY---EQGQISGD--------FQQVVLAARFGYPLTTSLYPYVKVGGAGWFGDSEGLRS 135
Query: 178 GHGSSV--VLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
G ++ G++Y +S ++Y S + + H+ +
Sbjct: 136 GSERGFSPIVAAGVEYAFTPRLSGRLEHQYTD--------SLGADSI----GYTDHHLTT 183
Query: 236 LGINMHF 242
LG++ F
Sbjct: 184 LGLSWRF 190
>gi|24371789|ref|NP_715831.1| fibronectin type III domain-containing protein [Shewanella oneidensis
MR-1]
gi|24345584|gb|AAN53276.1|AE015468_8 fibronectin type III domain protein [Shewanella oneidensis MR-1]
Length = 2522
Score = 35.2 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 41/138 (29%), Gaps = 12/138 (8%)
Query: 85 LPNGLGIELGHNIQ--------LEDFVFGINCHTTAAKDDSTFYR-LKEKYFIYGDVVLK 135
N G+ LG+ DF G A ++ +K + D V+
Sbjct: 2377 TGNAFGVSLGYQWTPTVALELGYADFGEGCARIKGATLTPEQYHELVKAVTPVLADGVM- 2435
Query: 136 AGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNY 195
G L+ G V + S N D G+ G+ Y +
Sbjct: 2436 LGLRF--TLLQHEGWRFEVPVGLFHWQADISSTMGNTTITTDLDGTDWYTGVRFSYQFSD 2493
Query: 196 DISLSASYRYIPHHIHSV 213
S+ Y+YI + +
Sbjct: 2494 AWSVGVGYQYIDIEPNDL 2511
>gi|113473802|ref|YP_718065.1| sex pilus assembly and synthesis protein [Sphingomonas sp. KA1]
gi|112821482|dbj|BAF03353.1| sex pilus assembly and synthesis protein [Sphingomonas sp. KA1]
Length = 457
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGM-GGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
F K + G VV + G V + G+ GGFG + ++S ++ + N + +
Sbjct: 342 FIAFGGKTGVRGRVVSREGALVGQAFLAGLAGGFGRGFSANTSSVLQGANVNVNGQRQ-- 399
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASYR 204
G+ +L GL V + + + Y
Sbjct: 400 KLGTGEILEGGLGEGVATSVDMVSKYL 426
>gi|182412974|ref|YP_001818040.1| hypothetical protein Oter_1152 [Opitutus terrae PB90-1]
gi|177840188|gb|ACB74440.1| hypothetical protein Oter_1152 [Opitutus terrae PB90-1]
Length = 219
Score = 35.2 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 70/237 (29%), Gaps = 36/237 (15%)
Query: 11 FVVFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETH 70
V L V + ++ +P D Y NY+ L S +
Sbjct: 14 MTVALGAVATAQAQDANVAVPNPADTITSGGL----IGSRYTQVEYNYIDLSGSGPSHAN 69
Query: 71 PLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYG 130
T N+ + + L ++ + G+ + +T Y Y
Sbjct: 70 GFGVTFNQPVNANFDAS-----LNYDWARAKW-AGVRGTDQVFEVGATAYTTLAWGRPYA 123
Query: 131 DVVL-----KAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVL 185
K G D IY + G G ++ N A G + + +
Sbjct: 124 MATAGWDWQKVGGLRDDSFIYRV-GVGMEFLAAPQFSVTPFVNFVRATG---FNANEYEI 179
Query: 186 GIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
G Y VN S++A +Y E V+ ++ S+G+N HF
Sbjct: 180 GAKATYRVNASWSVTARAQY-----------------EAVEDDDDSAEYSIGLNYHF 219
>gi|9256903|pdb|1QJP|A Chain A, High Resolution Structure Of The Outer Membrane Protein A
(Ompa) Transmembrane Domain
Length = 171
Score = 35.2 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 62/188 (32%), Gaps = 28/188 (14%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 8 YTGAKLG--WSQYHDTGLINNNGPTHENKLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 62
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKG 174
++ Y G + K GY + D L IY G D N G
Sbjct: 63 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRA----------DTYSNVYG 112
Query: 175 RFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIA 234
+ G S V G++Y + +I+ Y++ + N +A + R D +
Sbjct: 113 KNHDTGVSPVFAGGVEYAITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GML 162
Query: 235 SLGINMHF 242
SLG++ F
Sbjct: 163 SLGVSYRF 170
>gi|15600965|ref|NP_232595.1| hypothetical protein VCA0195 [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|121586718|ref|ZP_01676501.1| hypothetical protein VC274080_A0221 [Vibrio cholerae 2740-80]
gi|121727735|ref|ZP_01680823.1| hypothetical protein VCV52_A0209 [Vibrio cholerae V52]
gi|147672001|ref|YP_001215917.1| hypothetical protein VC0395_1081 [Vibrio cholerae O395]
gi|153215148|ref|ZP_01949846.1| hypothetical protein A55_A0189 [Vibrio cholerae 1587]
gi|153816767|ref|ZP_01969434.1| hypothetical protein A5C_A0240 [Vibrio cholerae NCTC 8457]
gi|153823197|ref|ZP_01975864.1| hypothetical protein A5E_A0227 [Vibrio cholerae B33]
gi|227811819|ref|YP_002811829.1| hypothetical protein VCM66_A0191 [Vibrio cholerae M66-2]
gi|229506639|ref|ZP_04396148.1| hypothetical protein VCF_001861 [Vibrio cholerae BX 330286]
gi|229510563|ref|ZP_04400043.1| hypothetical protein VCE_001971 [Vibrio cholerae B33]
gi|229514694|ref|ZP_04404155.1| hypothetical protein VCB_002346 [Vibrio cholerae TMA 21]
gi|229517305|ref|ZP_04406750.1| hypothetical protein VCC_001326 [Vibrio cholerae RC9]
gi|229526180|ref|ZP_04415584.1| hypothetical protein VCA_000295 [Vibrio cholerae bv. albensis
VL426]
gi|229605116|ref|YP_002875820.1| hypothetical protein VCD_000054 [Vibrio cholerae MJ-1236]
gi|254850607|ref|ZP_05239957.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745994|ref|ZP_05419941.1| hypothetical protein VCH_002360 [Vibrio cholera CIRS 101]
gi|262162168|ref|ZP_06031183.1| hypothetical protein VIG_003349 [Vibrio cholerae INDRE 91/1]
gi|262167831|ref|ZP_06035532.1| hypothetical protein VIJ_001002 [Vibrio cholerae RC27]
gi|297579679|ref|ZP_06941606.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298500049|ref|ZP_07009855.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657587|gb|AAF96108.1| hypothetical protein VC_A0195 [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549015|gb|EAX59052.1| hypothetical protein VC274080_A0221 [Vibrio cholerae 2740-80]
gi|121629952|gb|EAX62362.1| hypothetical protein VCV52_A0209 [Vibrio cholerae V52]
gi|124114872|gb|EAY33692.1| hypothetical protein A55_A0189 [Vibrio cholerae 1587]
gi|126512570|gb|EAZ75164.1| hypothetical protein A5C_A0240 [Vibrio cholerae NCTC 8457]
gi|126519285|gb|EAZ76508.1| hypothetical protein A5E_A0227 [Vibrio cholerae B33]
gi|146314384|gb|ABQ18924.1| hypothetical protein VC0395_1081 [Vibrio cholerae O395]
gi|227010961|gb|ACP07172.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014820|gb|ACP11029.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229336338|gb|EEO01356.1| hypothetical protein VCA_000295 [Vibrio cholerae bv. albensis
VL426]
gi|229345341|gb|EEO10314.1| hypothetical protein VCC_001326 [Vibrio cholerae RC9]
gi|229348674|gb|EEO13632.1| hypothetical protein VCB_002346 [Vibrio cholerae TMA 21]
gi|229353008|gb|EEO17948.1| hypothetical protein VCE_001971 [Vibrio cholerae B33]
gi|229356990|gb|EEO21908.1| hypothetical protein VCF_001861 [Vibrio cholerae BX 330286]
gi|229371602|gb|ACQ62024.1| hypothetical protein VCD_000054 [Vibrio cholerae MJ-1236]
gi|254846312|gb|EET24726.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255735748|gb|EET91146.1| hypothetical protein VCH_002360 [Vibrio cholera CIRS 101]
gi|262023739|gb|EEY42439.1| hypothetical protein VIJ_001002 [Vibrio cholerae RC27]
gi|262028243|gb|EEY46901.1| hypothetical protein VIG_003349 [Vibrio cholerae INDRE 91/1]
gi|297535325|gb|EFH74159.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542030|gb|EFH78081.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327485416|gb|AEA79822.1| hypothetical protein VCLMA_B0177 [Vibrio cholerae LMA3894-4]
Length = 182
Score = 35.2 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 16/152 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--------AKD 115
+ L+ +R S + G+N Q F+ G++ +
Sbjct: 21 GNSPYSFSLSTGFSRIDSPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEMLNT 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+K + F +G + + ++Y GG V + DN +
Sbjct: 80 QKQKIDVKVEGFYFGAFFEQP--INNLTILYARGGLSQFKVKERYELGAIGDN-----RQ 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G + +G + ++ ++L+ Y P
Sbjct: 133 FSGTNPYIGIGTKVQSSIDKSLALTMELSYYP 164
>gi|297521813|ref|ZP_06940199.1| outer membrane protein A [Escherichia coli OP50]
Length = 181
Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 51/154 (33%), Gaps = 20/154 (12%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
Y G + + + IN G G G+ Q+ +V G
Sbjct: 29 YTGAKLG--WSQYHDTGFINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMP 83
Query: 118 TFYRLKEK-YFIYG-DVVLKAGYSV-DSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAK 173
++ Y G + K GY + D L IY +GG +D N
Sbjct: 84 YKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVW-----------RADTKSNVY 132
Query: 174 GRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G+ G S V G++Y + +I+ Y++
Sbjct: 133 GKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN 166
>gi|213418467|ref|ZP_03351533.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
Length = 347
Score = 35.2 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 168 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 227
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 228 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 287
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G G +V +G+G + + S Y+ + S
Sbjct: 288 DADVNGDSIDNGVEGFAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 338
>gi|17861366|gb|AAK61593.1| OmpA [Pasteurella multocida]
Length = 348
Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 16/194 (8%)
Query: 57 NYVGLHISRLYETHPLA---DTINRKTYNSLLPNGLGIELGHNIQLEDFV---FGINCHT 110
YVG L + G+ G+ I V +
Sbjct: 28 FYVGAKAGWASFHDGLNQIEYVSKTSFGSKRNSVTYGVFGGYQITDNFAVELGYDDFGRA 87
Query: 111 TAAKDDSTFYRLKEKYFIYGD-VVLKAGY-SVDSLLIYGMGGFGGAYVIDSSLEKVESDN 168
+ T K+ +G + LKA Y +D L +Y GA +I S +
Sbjct: 88 KVRANSKTTAFDAAKHTNHGTHLSLKASYPLLDGLDVYAR---VGAALIRSDYKLYAPLI 144
Query: 169 SKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRK 228
+K F S V GL+Y +++L Y+++ + +D + D +
Sbjct: 145 NKRLSPHFKITQVSPVFAGGLEYAFIPELTLRVEYQWVNNVCKF-----EYADGQYADFR 199
Query: 229 GNAHIASLGINMHF 242
+ + G++ F
Sbjct: 200 PDIGSVTAGLSYRF 213
>gi|54294317|ref|YP_126732.1| hypothetical protein lpl1382 [Legionella pneumophila str. Lens]
gi|53754149|emb|CAH15622.1| hypothetical protein lpl1382 [Legionella pneumophila str. Lens]
Length = 254
Score = 35.2 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 28/215 (13%)
Query: 38 NEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNI 97
NE + + D ++ W G +G I YE +G+E N
Sbjct: 57 NETSQELNFTDFDHFDWHGLGLGGEIYLGYEKFFRTHYY------------IGLEGFFNR 104
Query: 98 QLEDFVFGINCHTTAAKDDSTFYRL---KEKYFIYGDVVLKAGYSVDSL-LIYGMGGFGG 153
+ + R+ K + + G+ + S+ +IYG G+
Sbjct: 105 SSN------EGKIYFFDSNELYSRILKGSFKQKWQSGLAIHPGFYLPSVGIIYGRVGWIV 158
Query: 154 AYVIDS-SLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY-----IP 207
+ V S S+ + S + + + V LG GL+ + + + +
Sbjct: 159 SDVNLSGSITQSGPFGSFSGRFSNTKKKNGVQLGTGLELELTKNWRCRVEWDWNRLQDFI 218
Query: 208 HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+++N + R+ + LG+N F
Sbjct: 219 FDSQGRDSNNHRYQTTRIAKHPILEQFKLGLNWRF 253
>gi|54297239|ref|YP_123608.1| hypothetical protein lpp1284 [Legionella pneumophila str. Paris]
gi|53751024|emb|CAH12435.1| hypothetical protein lpp1284 [Legionella pneumophila str. Paris]
Length = 378
Score = 35.2 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 7/130 (5%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA-YVIDSSLEKVESDNSKNAKGRFD 177
Y+ K K + V + +L+ + GG G + E D + F
Sbjct: 248 NYQWKVKSDLVLASVKANAFRWKNLMPFVQGGVGASSNRASQYYENALPDVTPRISPNFA 307
Query: 178 GHGSS---VVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNA--KSDVERVDRKGNA 231
H ++ LG GLD+ + LS Y Y + S +++ + + + NA
Sbjct: 308 NHTATVFAYQLGAGLDWEIRPQWLLSLGYEYSDLGKVRSGYGTDSWNRETLSSKNLTSNA 367
Query: 232 HIASLGINMH 241
H
Sbjct: 368 GTFGFTYLFH 377
>gi|147886295|gb|ABQ52380.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin]
Length = 229
Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 163 KVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDV 222
+S+ + G S V G++Y + +I+ Y++ + N +A +
Sbjct: 5 DTKSNVPGGPSTKDHDTGVSPVFAGGIEYAITPEIATRLEYQW------TNNIGDANTIG 58
Query: 223 ERVDRKGNAHIASLGINMHF 242
R D + S+G++ F
Sbjct: 59 TRPDN----GLLSVGVSYRF 74
>gi|148975589|ref|ZP_01812460.1| hypothetical protein VSWAT3_03476 [Vibrionales bacterium SWAT-3]
gi|145965017|gb|EDK30268.1| hypothetical protein VSWAT3_03476 [Vibrionales bacterium SWAT-3]
Length = 211
Score = 35.2 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 19/146 (13%)
Query: 55 SGNYVGLHISR---------LYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFG 105
SG Y+G I T P+ +Y + + +Q D+
Sbjct: 25 SGLYLGGAIGTVDFEDDDLVSSTTEPVTFEAEDNSYRLIAGYKFNRIVSLEVQYTDY--- 81
Query: 106 INCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVE 165
A V GY+ D+ GM FG + L+
Sbjct: 82 --GDLVAKNHADKTEGFTW-TPQTVSVAANLGYTFDN----GMRPFGIIGLSSIDLDMKN 134
Query: 166 SDNSKNAKGRFDGHGSSVVLGIGLDY 191
+D S+ + FD G+ V G+G++Y
Sbjct: 135 ADGSRPSGSDFDDTGTGVRFGVGVEY 160
>gi|215919179|ref|NP_820396.2| hypothetical protein CBU_1412 [Coxiella burnetii RSA 493]
gi|206584063|gb|AAO90910.2| hypothetical exported protein [Coxiella burnetii RSA 493]
Length = 273
Score = 35.2 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 75/202 (37%), Gaps = 26/202 (12%)
Query: 53 IWS-GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTT 111
IW G G H+ Y L N G+ Q V TT
Sbjct: 84 IWQYGALWGGHVGIQYHFIRPYY---------LGLNFAGMSNSRKAQFNGSVSLGAGSTT 134
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSK 170
D+T L+ KY D+ G + L +Y GG A +++ + ++
Sbjct: 135 VPVIDTT---LRLKYNF--DLTGIFGIDITPALHLYLKGGGSYAKLVEDFAVLQATTSAS 189
Query: 171 NAKGRFDGHGS-SVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSN--------AKSD 221
++ HG VVLG GL + +SL A Y + + H++N +N A D
Sbjct: 190 ISQQHQTHHGLWGVVLGAGLARDLCRWVSLFAEYDFYDYGNHTLNTANNISVDPVVAPPD 249
Query: 222 VERVDRKG-NAHIASLGINMHF 242
V + K A+ GIN++F
Sbjct: 250 VYTQEAKNIRAYTIRAGINVNF 271
>gi|325123268|gb|ADY82791.1| hypothetical protein BDGL_002205 [Acinetobacter calcoaceticus
PHEA-2]
Length = 430
Score = 35.2 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 148 MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
G+ G S+ VE+ S + + + G D+ V + L A Y+
Sbjct: 261 TQGYAGGNGNASARAFVENYKSGAGDDK-----TGWGVAAGTDFKVADPLKLFADASYVV 315
Query: 208 HHIHSVNNSNAKSDVERVDRKGN 230
+ + + SN+ + + + N
Sbjct: 316 GNSNYLYGSNSAYTLVNDNIEQN 338
>gi|261346858|ref|ZP_05974502.1| SapA protein [Providencia rustigianii DSM 4541]
gi|282565038|gb|EFB70573.1| SapA protein [Providencia rustigianii DSM 4541]
Length = 244
Score = 35.2 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 6/109 (5%)
Query: 139 SVDSLLIYGMG--GFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYD 196
+ + +G+G S E + S N + + LG+G Y N +
Sbjct: 137 AFAPYISFGLGLASTRYENTQRSEFEILGLKQSSNQSKSQRINKLAWSLGLGSRYAFNDN 196
Query: 197 ISLSASYRYIPHHIHSVNNSNAKSDVERVDRKG---NAHIASLGINMHF 242
+S YR+ + ++ NA D + D AH GI F
Sbjct: 197 LSFDLGYRFTEAGKYKISMPNA-FDKDGTDTSTIKLAAHDFMFGIAYRF 244
>gi|269963683|ref|ZP_06178005.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831595|gb|EEZ85732.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 171
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 26/168 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G I + T +LP +GIE+G+ + ++ + + D
Sbjct: 23 LYAGGQIGQSDIDSENDTTYGIHVGTGILPL-IGIEVGYFNHGK-----VDLNLAGNRGD 76
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
F + K L +Y GG VE + + ++ +
Sbjct: 77 VDFSSFY--------LAAKPSIDFGPLHVYAKGGINAFN--------VEYNGNLSSLDKD 120
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
DG S + G+G +Y + +IS+ ASY+ + +S+ S +
Sbjct: 121 DG--VSYMYGVGAEYFLLDNISVGASYQ--AFGVDIDGDSDTVSSITG 164
>gi|213615908|ref|ZP_03371734.1| puative autotransporter/virulence factor [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length = 326
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 57 NYVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINC 108
+V ++S + + L+ ++ TY S G G++LG++++L D +G
Sbjct: 147 IFVDGNLSYSHFNNDLSANMSDGTYVDGNTSSDAWGFGLKLGYDLKLGDAGYVTPYGSVS 206
Query: 109 HTTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVES 166
+ DD +K Y + + G Y Y + + +
Sbjct: 207 GLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNN 266
Query: 167 DNSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D N +G G +V +G+G + + S Y+ + S
Sbjct: 267 DADVNGDSIDNGVEGFAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 317
>gi|164686055|ref|ZP_01946369.2| hypothetical protein A35_A1452 [Coxiella burnetii 'MSU Goat Q177']
gi|165924203|ref|ZP_02220035.1| hypothetical protein COXBURSA334_0554 [Coxiella burnetii RSA 334]
gi|212212224|ref|YP_002303160.1| hypothetical protein CbuG_0604 [Coxiella burnetii CbuG_Q212]
gi|212219009|ref|YP_002305796.1| hypothetical protein CbuK_1485 [Coxiella burnetii CbuK_Q154]
gi|164601611|gb|EAX33042.2| hypothetical protein A35_A1452 [Coxiella burnetii 'MSU Goat Q177']
gi|165916352|gb|EDR34956.1| hypothetical protein COXBURSA334_0554 [Coxiella burnetii RSA 334]
gi|212010634|gb|ACJ18015.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
gi|212013271|gb|ACJ20651.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 273
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 131 DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-SVVLGIG 188
D+ G + L +Y GG A +++ + ++ ++ HG VVLG G
Sbjct: 149 DLTGIFGIDITPALHLYLKGGGSYAKLVEDFAVLQATTSASISQQHQTHHGLWGVVLGAG 208
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSN--------AKSDVERVDRKG-NAHIASLGIN 239
L + +SL A Y + + H++N +N A DV + K A+ GIN
Sbjct: 209 LARDLCRWVSLFAEYDFYDYGNHTLNTANNISVDPVVAPPDVYTQEAKNIRAYTIRAGIN 268
Query: 240 MHF 242
++F
Sbjct: 269 VNF 271
>gi|187926000|ref|YP_001892345.1| TonB-dependent siderophore receptor [Ralstonia pickettii 12J]
gi|241665485|ref|YP_002983844.1| TonB-dependent siderophore receptor [Ralstonia pickettii 12D]
gi|187727754|gb|ACD28918.1| TonB-dependent siderophore receptor [Ralstonia pickettii 12J]
gi|240867512|gb|ACS65172.1| TonB-dependent siderophore receptor [Ralstonia pickettii 12D]
Length = 742
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 63/222 (28%), Gaps = 35/222 (15%)
Query: 21 NHSLAVDLYLPRKIDLFNEADNNVEYQ--DDEYGIWSGNYVGLHISRLYET--HPLADTI 76
L D Y+ + N A+ + Y S N+V + +++
Sbjct: 468 VAGLRYDRYVASISNSLNSANTPASAKITALPYAQQSVNFVSTRLGGIWQPTDWQSYYVS 527
Query: 77 NRKTYNSLLPNGLGIEL----------------GHNIQLEDF-----VFGINCHTTAAKD 115
++N L +G ++ D +F I +
Sbjct: 528 YGTSFNPSLEQLVGTTGQQGLDPEKNKSYEAGGKWDLLNGDLSVSSALFQITKDNARTQI 587
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
DST Y K + G + G+ D L I+ G Y+ + + +
Sbjct: 588 DSTTYTSAGKIRVRGARLGATGHVTDKLQIFA----GYTYLDAQIVNGIAAGTQGMTPAN 643
Query: 176 FDGHGSS-VVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
H ++ Y + + A Y+ + N+
Sbjct: 644 TPKHSATVWT-----SYAFVPNWEVGAGAFYMSQRYANNTNT 680
>gi|110639837|ref|YP_680047.1| hypothetical protein CHU_3470 [Cytophaga hutchinsonii ATCC 33406]
gi|110282518|gb|ABG60704.1| hypothetical protein CHU_3470 [Cytophaga hutchinsonii ATCC 33406]
Length = 311
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 150 GFGGAYVIDSSLEKVESDNSKNAKGRFDG----HGSSVVLGIGLDYMVNYDISLSASYRY 205
GF Y + N +G +G S L G +Y + I L A + Y
Sbjct: 39 GFFDTYYYRGPITFTLGAGMTNYRGDLTKGLGLNGLSYGLSAGANYKIWPHIVLGAEFSY 98
Query: 206 IPHHIHSVNNS-NAKSDVERVDRK 228
+ N S N + ++ +
Sbjct: 99 LNLQSTDYNKSRNGSFNATAMELQ 122
>gi|83717969|ref|YP_438305.1| outer membrane porin OpcP [Burkholderia thailandensis E264]
gi|83651794|gb|ABC35858.1| outer membrane porin OpcP [Burkholderia thailandensis E264]
Length = 411
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 74/220 (33%), Gaps = 17/220 (7%)
Query: 4 NGYGALFFV----VFLSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIW-SGNY 58
NGYG L + V P + A D F+ + N + D + S +Y
Sbjct: 137 NGYGTLTLGRQYDTMVDFVAPLSASAGDFGDTDFAHPFDNDNLNHSLRIDNAVKYTSDHY 196
Query: 59 VGLHISRLYETHPLADTINRKTYNSLLPNGLG--IELGHNIQLEDFVFGINCHTTAAKDD 116
G+ LY A+ + + Y+ G G G +Q+ D G + A D
Sbjct: 197 AGVKFGALYGFSNAANFADNRAYSLAASYGNGPLKLAGAYLQI-DGSKGTTGASPGAVDA 255
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
L + ++ G ++ S + Y +G +V S + RF
Sbjct: 256 VEAKGLSQGGWLTGSKRMR---SYGGGVNYTLGSAVVGFVYTRSRYDDSGSFGSTGEIRF 312
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
D + L Y + + +Y Y H+ + ++
Sbjct: 313 DNYE------ANLRYAITPAFGVGGAYVYTGGHVSASDSR 346
>gi|129138|sp|P24754|OMPA_ESCHE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146987|gb|AAA24234.1| outer membrane protein II [Escherichia hermannii]
gi|146995|gb|AAA24238.1| outer membrane protein II [Escherichia hermannii]
Length = 243
Score = 35.2 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 132 VVLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLD 190
+ K GY + D L IY G G + DS + K+ G S V GL+
Sbjct: 1 LTAKLGYPITDELDIYTRLG-GMVWRADSKYNIPGGASFKDHDT-----GVSPVFAGGLE 54
Query: 191 YMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ V DI+ Y++ + N +A + R D + S+G++ F
Sbjct: 55 WAVTRDIATRLEYQW------TNNIGDANTVGTRPDN----GLLSVGVSYRF 96
>gi|154706605|ref|YP_001423993.1| hypothetical protein CBUD_0584 [Coxiella burnetii Dugway 5J108-111]
gi|154355891|gb|ABS77353.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
Length = 273
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Query: 131 DVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGS-SVVLGIG 188
D+ G + L +Y GG A +++ + ++ ++ HG VVLG G
Sbjct: 149 DLTGIFGIDITPALHLYLKGGGSYAKLVEDFAVLQATTSASISQQHQTHHGLWGVVLGAG 208
Query: 189 LDYMVNYDISLSASYRYIPHHIHSVNNSN--------AKSDVERVDRKG-NAHIASLGIN 239
L + +SL A Y + + H++N +N A DV + K A+ GIN
Sbjct: 209 LARDLCRWVSLFAEYDFYDYGNHTLNTANNISVDPVVAPPDVYTQEAKNIRAYTIRAGIN 268
Query: 240 MHF 242
++F
Sbjct: 269 VNF 271
>gi|299533012|ref|ZP_07046399.1| Opacity protein-like surface antigen [Comamonas testosteroni S44]
gi|298719236|gb|EFI60206.1| Opacity protein-like surface antigen [Comamonas testosteroni S44]
Length = 223
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 8/102 (7%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YGM G G A + S + N + + +G G+ Y +S+ +R
Sbjct: 126 LYGMAGLGLARLESSGWQG----NPGRQYISDTQNNLAYSVGFGVSYSPVQKLSIDLGWR 181
Query: 205 YIPHHIHSVNNSNAKS----DVERVDRKGNAHIASLGINMHF 242
Y+ +N + E++ K A S+G+ F
Sbjct: 182 YVDMGKAKSGANNFANVRGLQDEQMRAKLTASEISIGLRYSF 223
>gi|148826224|ref|YP_001290977.1| outer membrane protein P5 [Haemophilus influenzae PittEE]
gi|148716384|gb|ABQ98594.1| Outer membrane protein P5 [Haemophilus influenzae PittEE]
Length = 238
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLS 200
D L +YG G E +++ ++N K +S + +G +Y V ++++
Sbjct: 3 DGLDVYGKAGVALVRSDYKFYE--DANGTRNHKEGRHTARASGLFAVGAEYAVLPELAVR 60
Query: 201 ASYRYIP--HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
Y+++ +N N ++ + GI+ F
Sbjct: 61 LEYQWLTRVGKYRPQDNPN-----TAINYNPWIGSINAGISYRF 99
>gi|147003|gb|AAA24242.1| outer membrane protein II [Escherichia blattae]
Length = 240
Score = 35.2 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 20/113 (17%)
Query: 132 VVLKAGYS-VDSLLIYG-MGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGL 189
+ K Y D L IY +GG +++ + N G S V G+
Sbjct: 1 LTAKLSYPIYDDLDIYTRLGGMVWRADAKNNVVGGDRSNHDT--------GVSPVFAGGV 52
Query: 190 DYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+Y + I+ Y++I N +A + R D + S+G++ F
Sbjct: 53 EYAMTPSIATRLEYQWIN------NIGDAGTVGTRPDN----GMLSVGVSYRF 95
>gi|327479356|gb|AEA82666.1| outer membrane protein OprG [Pseudomonas stutzeri DSM 4166]
Length = 228
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y G + D+ L + D G + +G +DYM+ +I L+A RY
Sbjct: 136 YVGAGINYTWFFDTELSSSAEGKGFSGLDVKDSWGLAAQVG--MDYMLTDNIMLNAQVRY 193
Query: 206 IPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
I I + +N +VD + + +G+ F
Sbjct: 194 ID--IDTTGTTNFGGAKVKVDLDVDPFVYMVGLGYKF 228
>gi|304411584|ref|ZP_07393197.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|307306640|ref|ZP_07586382.1| OmpA domain-containing protein [Shewanella baltica BA175]
gi|304350111|gb|EFM14516.1| OmpA domain-containing protein [Shewanella baltica OS183]
gi|306910608|gb|EFN41037.1| OmpA domain-containing protein [Shewanella baltica BA175]
Length = 192
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 58/191 (30%), Gaps = 37/191 (19%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL----GIELGHNIQLEDFVFGINCHTT 111
G YVG + L N L+ IE G+ + D+ +
Sbjct: 35 GIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEGGY-VNFGDY----GNSLS 89
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ D LK Y I VD + +Y GG L + + +
Sbjct: 90 NAETDGYTAALKVSYPI-----------VDRVELYAKGGQLWYSTDYDVLGFSGNKDDE- 137
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V G G+ + V ++A Y + I N SN D +
Sbjct: 138 ----------GVFAGAGVAFKVTDRFLINAEYTWYDAGITIENVSN------GADTDTDF 181
Query: 232 HIASLGINMHF 242
ASLG+ F
Sbjct: 182 KQASLGVEYRF 192
>gi|145633105|ref|ZP_01788837.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
gi|144986331|gb|EDJ92910.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
Length = 359
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 29/172 (16%)
Query: 93 LGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLK----------------- 135
+ + F +G+ D+ + Y +G L+
Sbjct: 56 ASYGYRRNTFTYGVFGGYQILNQDNFGLAAELGYDNFGRAKLREVGKPSAKHTNHGAHLS 115
Query: 136 --AGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYM 192
Y V D L +YG G E E++ ++N +S + +G +Y
Sbjct: 116 LKGSYEVLDGLDVYGKAGVALVRSDYKRYE--EANGTRNHDKGRHSLRTSGLFSVGAEYA 173
Query: 193 VNYDISLSASYRYIP--HHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
V ++++ Y+++ + + + N+ ++ ++GI+ F
Sbjct: 174 VLPELAVRLEYQWLTRVGKLRTQDKPNSA-----INYNPWIGSINVGISYRF 220
>gi|26988610|ref|NP_744035.1| outer membrane autotransporter [Pseudomonas putida KT2440]
gi|24983386|gb|AAN67499.1|AE016376_9 outer membrane autotransporter [Pseudomonas putida KT2440]
Length = 730
Score = 35.2 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 10/174 (5%)
Query: 45 EYQDDEYGIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGH------NIQ 98
+ D E G + ++ R L+D K S L G+ +E+G +
Sbjct: 542 TWLDPESGYYIDTVARINRFRNQADVRLSDGSKAKGDYSNLGAGVSLEVGRHLNLADDWF 601
Query: 99 LEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVID 158
LE F ++ KD S ++ ++ K G SV G G Y+
Sbjct: 602 LEPF-AQLSGLVVQGKDYSLDNGMRANSNSTHSLLGKVGTSVGRTFSAGTGRSVQPYLRV 660
Query: 159 SSL-EKVESDNSKNAKGRFDGH--GSSVVLGIGLDYMVNYDISLSASYRYIPHH 209
+++ E V + K RF + GS +G G+ A + Y
Sbjct: 661 AAVHEFVNDNQVKVNDNRFSSNLAGSRAEIGAGVAVAWGEKWQAHADFDYSHGS 714
>gi|161347191|gb|ABX65299.1| 31 kDa bacteriophage-associated heme binding protein [Bartonella
vinsonii subsp. berkhoffii]
Length = 182
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 4 IALISTSTAQAADIVVPHEVVSPRVTPI----VSPSTFSWTGFYLGGQVGNFSSKVKITD 59
Query: 75 TINRKTYNSLL----PNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
+ + + P+G GI G NI+L + + G+ A T
Sbjct: 60 SGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDT 110
>gi|154175502|ref|YP_001408765.1| hypothetical protein CCV52592_1443 [Campylobacter curvus 525.92]
gi|112802636|gb|EAT99980.1| hypothetical protein CCV52592_1443 [Campylobacter curvus 525.92]
Length = 195
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 6/136 (4%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDF-VFGINCHTTAA 113
G +VG + +++ K +S +P LGI+ G++ D+ V+G + A
Sbjct: 24 QGAFVGGSVGYNFKSGNELKDDGIKFKDSSIP--LGIQGGYD--FGDYRVYGEYVYGAKA 79
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAK 173
K T +K G + + GAY + L+ +
Sbjct: 80 KAHKTVGDVKADLKWK-THKFLVGADYTPQIAQNLRFLVGAYTGLTYLDYKLGTVGPGER 138
Query: 174 GRFDGHGSSVVLGIGL 189
+ + +G +
Sbjct: 139 VHISDNSTDWTIGGRV 154
>gi|46200841|ref|ZP_00207866.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 342
Score = 35.2 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 151 FGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHI 210
F G + + L+ + D + G+ Y + ++ L A YRY
Sbjct: 116 FVGLGIGAARLDNGTVKKNGANAYSGDDWQFAYQGFAGVGYDLTSNVELKAQYRYFSTLN 175
Query: 211 HSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ S A + ++D + H LG F
Sbjct: 176 YE---SKAATTNTKLDSEYRDHGLMLGFVYKF 204
>gi|325955672|ref|YP_004239332.1| hypothetical protein Weevi_2080 [Weeksella virosa DSM 16922]
gi|323438290|gb|ADX68754.1| hypothetical protein Weevi_2080 [Weeksella virosa DSM 16922]
Length = 769
Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 42/168 (25%), Gaps = 40/168 (23%)
Query: 95 HNIQLEDFVFGINCHTTAAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA 154
+ + FGI+ AK D FY L + YG + GY D+ G
Sbjct: 79 WGYRFDGEKFGIDMILEIAKVDPRFYVLAYEGTQYGTAIGGFGYDWDNA-----GTRALV 133
Query: 155 YVIDSSLEKVESDN----------SKNAKGRFDGHGSSVV-------------------- 184
+++ D A D S
Sbjct: 134 KNNNTTYPYYPIDGKVLTNDYDFDDWTAFDPNDRWYSGWFSKGFWSYWVKDSADEDFAFS 193
Query: 185 -LGIG---LDYMVNYDISLSASYRYIPHHIHSVNNS-NAKSDVERVDR 227
LG L+ S S ++ P NA+ ++
Sbjct: 194 GLGASSRKLEDGSWDGWSFSVEFQSFPMADKFTAAEPNAEEPIDFTKG 241
>gi|254249287|ref|ZP_04942607.1| Opacity protein [Burkholderia cenocepacia PC184]
gi|124875788|gb|EAY65778.1| Opacity protein [Burkholderia cenocepacia PC184]
Length = 254
Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 145 IYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYR 204
+YG G G A V + N + G G+ Y +N S+ YR
Sbjct: 157 VYGTLGIGVAIVSADGWQ----TNDTRRFASKTQTNLAYSAGAGVSYAINKRFSIDLGYR 212
Query: 205 YIPHHIHSVNNSNAKSDV 222
Y+ + + V
Sbjct: 213 YVDMGNVETGFNTFANRV 230
>gi|6012949|emb|CAB57308.1| putative outer-membrane protein A [Pectobacterium carotovorum]
Length = 367
Score = 35.2 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 30/190 (15%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAA 113
+G Y + +P+ + + N LG E+G++ G + +
Sbjct: 42 TGFY--GNGYTDVNNNPIKSKLGAGAFVGYQANPYLGFEMGYDW------LGRMKYAGST 93
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + LK + + K Y V L +Y G +D S N
Sbjct: 94 ANPADSASLKAQGI---QLAAKLSYPVLPDLDVYTRLG------GMVWRVDTHADRSGNH 144
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D G S + IG++Y ++ + + Y+++ N +A + V + +
Sbjct: 145 LNN-DDTGVSPLAAIGIEYAIDKNWATRVDYQWVS------NIGDAGT----VGARPDNM 193
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 194 LMSVGLSYRF 203
>gi|212633149|ref|YP_002309674.1| outer membrane protein [Shewanella piezotolerans WP3]
gi|212554633|gb|ACJ27087.1| Outer membrane protein, putative [Shewanella piezotolerans WP3]
Length = 184
Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 58/187 (31%), Gaps = 30/187 (16%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKD 115
G YVG I + D+ + ++Y G G+N ++ FG+ D
Sbjct: 28 GAYVGGQIG-AFSADVEGDSESGQSY--------GAYGGYN--FNEW-FGLEGTIYLTND 75
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+ D+ +YG G V+ +
Sbjct: 76 FVDNEYASVNAASFSVAPKFTLVLNDTFSLYGKIGLASVAVVTDTF-----------IRD 124
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIAS 235
D G + +G G++ V +++ Y +++ + + +D +
Sbjct: 125 VDYQGFGLTVGAGVNAAVTDKLNIRLGY---DFTSAELDSDDFGAQDIDMDLSN----VT 177
Query: 236 LGINMHF 242
LG++ F
Sbjct: 178 LGMHYQF 184
>gi|152999073|ref|YP_001364754.1| OmpA domain-containing protein [Shewanella baltica OS185]
gi|151363691|gb|ABS06691.1| OmpA domain protein transmembrane region-containing protein
[Shewanella baltica OS185]
Length = 192
Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 58/191 (30%), Gaps = 37/191 (19%)
Query: 56 GNYVGLHISRLYETHPLADTINRKTYNSLLPNGL----GIELGHNIQLEDFVFGINCHTT 111
G YVG + L N L+ IE G+ + D+ +
Sbjct: 35 GIYVGANYGYLKVDGKDDFDDNSDVIQGLVGYRFNQYLAIEGGY-VNFGDY----GNSLS 89
Query: 112 AAKDDSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKN 171
A+ D LK Y I VD + +Y GG L + + +
Sbjct: 90 NAETDGYTAALKVSYPI-----------VDRVELYAKGGQLWYSTDYDVLGFSGNKDDE- 137
Query: 172 AKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNA 231
V G G+ + V ++A Y + I N SN D +
Sbjct: 138 ----------GVFAGAGVAFKVTDRFLINAEYTWYDAGITVENVSN------GADTDTDF 181
Query: 232 HIASLGINMHF 242
ASLG+ F
Sbjct: 182 KQASLGVEYRF 192
>gi|153801595|ref|ZP_01956181.1| hypothetical protein A51_C0184 [Vibrio cholerae MZO-3]
gi|124122851|gb|EAY41594.1| hypothetical protein A51_C0184 [Vibrio cholerae MZO-3]
Length = 182
Score = 35.2 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 16/152 (10%)
Query: 64 SRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTA--------AKD 115
+ L+ +R S + G+N Q F+ G++ +
Sbjct: 21 GNSPYSFSLSTGFSRIDNPSSSDEAWVTQFGYNYQFSPFI-GLDLGYSGMIGNGAEMLNT 79
Query: 116 DSTFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGR 175
+K + F +G + + ++Y GG V + DN +
Sbjct: 80 QKQKIDVKVEGFYFGAFFEQP--INNLTILYARGGLSQFKVKERYELGAIGDN-----RQ 132
Query: 176 FDGHGSSVVLGIGLDYMVNYDISLSASYRYIP 207
F G + +G + ++ ++L+ Y P
Sbjct: 133 FSGTNPYIGIGTKVQSSIDKSLALTMELSYYP 164
>gi|66934583|gb|AAY58302.1| hemin-binding protein [Bartonella vinsonii subsp. berkhoffii]
Length = 182
Score = 35.2 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 15 LSIVVPNHSLAVDLYLPRKIDLFNEADNNVEYQDDEYGIWSGNYVGLHISRLYETHPLAD 74
++++ + + A D+ +P ++ W+G Y+G + + D
Sbjct: 4 IALISTSTAQAADIVVPHEVVSPRVTPI----VSPSTFSWTGFYLGGQVGNFSSKVEITD 59
Query: 75 TINRKTYNSLL----PNGL--GIELGHNIQLE-DFVFGINCHTTAAKDDST 118
+ + + P+G GI G NI+L + + G+ A T
Sbjct: 60 SGKKNEFFGKDQTPKPSGFMGGIYTGSNIELGNNLILGVETDAVWADRGDT 110
>gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163]
gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium wasabiae WPP163]
Length = 361
Score = 35.2 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 64/190 (33%), Gaps = 30/190 (15%)
Query: 55 SGNYVGLHISRLYETHPLADTINRKTYNSLLPNG-LGIELGHNIQLEDFVFGINCHTTAA 113
+G Y + +P+ + + N LG ELG++ G + +
Sbjct: 42 TGFY--GNGYTGVVNNPIKSKLGAGAFVGYQANPYLGFELGYDW------LGRMKYAGSD 93
Query: 114 KDDSTFYRLKEKYFIYGDVVLKAGYSVDSLL-IYGMGGFGGAYVIDSSLEKVESDNSKNA 172
+ + K + K Y V L +Y G +D S
Sbjct: 94 TNAADSASFKAQGIQLAT---KLSYPVMPDLDVYTRLG------GLVWRTDSHADRSGTH 144
Query: 173 KGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAH 232
D G S + +G++Y ++ + + Y+++ N +A + R D
Sbjct: 145 LNNND-TGVSPLAAVGIEYAIDKNWATRVDYQWVS------NIGDAGTVGARPDNL---- 193
Query: 233 IASLGINMHF 242
+ S+G++ F
Sbjct: 194 LMSVGLSYRF 203
>gi|170683055|ref|YP_001742505.1| outer membrane autotransporter [Escherichia coli SMS-3-5]
gi|170520773|gb|ACB18951.1| outer membrane autotransporter barrel domain protein [Escherichia
coli SMS-3-5]
Length = 714
Score = 35.2 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 11/170 (6%)
Query: 58 YVGLHISRLYETHPLADTINRKTY----NSLLPNGLGIELGHNIQLED----FVFGINCH 109
+V +S + + L+ T++ TY + G G++ G++ +L D +G
Sbjct: 536 FVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSG 595
Query: 110 TTAAKDDSTF-YRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSS-LEKVESD 167
+ DD +K Y + + G Y Y + + +
Sbjct: 596 LFQSGDDYQLSNNMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNH 655
Query: 168 NSKNAKGRFDGH-GSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNS 216
N N +G GS+V +G+G + + S Y+ + S
Sbjct: 656 NDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS 705
>gi|154246508|ref|YP_001417466.1| opacity protein and related surface antigens-like protein
[Xanthobacter autotrophicus Py2]
gi|154160593|gb|ABS67809.1| Opacity protein and related surface antigens-like protein
[Xanthobacter autotrophicus Py2]
Length = 236
Score = 35.2 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 7/64 (10%)
Query: 179 HGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGI 238
+ G G+ Y ++ D+SL SYRY+ S A SD AH G+
Sbjct: 179 WQFAWSAGAGVSYALSADLSLDVSYRYLDLGSPSSAGVFAVSDAI-------AHQVRFGV 231
Query: 239 NMHF 242
Sbjct: 232 RYML 235
>gi|18307546|emb|CAD21163.1| putative invasin [Salmonella enterica IIIb 50:k:z]
Length = 239
Score = 35.2 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 146 YGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRY 205
Y G G A V + + N + + GIG Y V +I++ ASY+Y
Sbjct: 141 YISAGVGLARVKLKNNT-IPVGYDINETLSASKNNFAWGAGIGAKYAVTDNIAIDASYKY 199
Query: 206 IPHHIHSVNNSNAKSD 221
I S++ +N D
Sbjct: 200 INAGKVSISKNNYAGD 215
>gi|148358862|ref|YP_001250069.1| hypothetical protein LPC_0745 [Legionella pneumophila str. Corby]
gi|296106908|ref|YP_003618608.1| hypothetical protein lpa_01960 [Legionella pneumophila 2300/99
Alcoy]
gi|148280635|gb|ABQ54723.1| hypothetical protein LPC_0745 [Legionella pneumophila str. Corby]
gi|295648809|gb|ADG24656.1| hypothetical protein lpa_01960 [Legionella pneumophila 2300/99
Alcoy]
Length = 369
Score = 34.8 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 7/130 (5%)
Query: 119 FYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGA-YVIDSSLEKVESDNSKNAKGRFD 177
Y+ K K + V + +L+ + GG G + E D + F
Sbjct: 239 NYQWKVKSDLVLASVKANVFRWKNLMPFIQGGIGASSNRASQYYENALPDVTPRISPNFA 298
Query: 178 GHGSS---VVLGIGLDYMVNYDISLSASYRYIP-HHIHSVNNSNA--KSDVERVDRKGNA 231
H ++ LG GLD+ + LS Y Y + S +++ + + + NA
Sbjct: 299 NHTATVFAYQLGAGLDWEIRPQWLLSLGYEYSDLGKVRSGYGTDSWNRETLSSKNLTSNA 358
Query: 232 HIASLGINMH 241
+ H
Sbjct: 359 GTFGITYLFH 368
>gi|320353425|ref|YP_004194764.1| hypothetical protein Despr_1309 [Desulfobulbus propionicus DSM
2032]
gi|320121927|gb|ADW17473.1| hypothetical protein Despr_1309 [Desulfobulbus propionicus DSM
2032]
Length = 250
Score = 34.8 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 39/128 (30%), Gaps = 6/128 (4%)
Query: 88 GLGIELGHNIQLEDFVFGINCHTTAAK-DDSTFYRLKEKYFIYGDVVLKAGY----SVDS 142
G G + Q F + A DD T + V GY D+
Sbjct: 104 GFGGAIALGKQFGQFRAELELAYQGADLDDETAFGYDLGGDYNAKTVFVNGYYEIPVYDA 163
Query: 143 LLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSAS 202
+Y M G G A + D G D + + G+G+ Y +I+
Sbjct: 164 FAVYAMAGLGVAQFDWNVDVSAGLDGPAGTYGGSD-NAFAYKAGLGMTYNFTDEIAGDLG 222
Query: 203 YRYIPHHI 210
Y Y+
Sbjct: 223 YEYLGISD 230
>gi|156974781|ref|YP_001445688.1| hypothetical protein VIBHAR_02499 [Vibrio harveyi ATCC BAA-1116]
gi|156526375|gb|ABU71461.1| hypothetical protein VIBHAR_02499 [Vibrio harveyi ATCC BAA-1116]
Length = 171
Score = 34.8 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 26/168 (15%)
Query: 57 NYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDD 116
Y G I + T +LP +GIE+G+ + ++ + K D
Sbjct: 23 LYAGGQIGQSDIDSESDTTYGIHVGTGILPL-IGIEVGYFNHGQ-----VDINLGGNKGD 76
Query: 117 STFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRF 176
+ K L +Y GG VE + + ++ +
Sbjct: 77 VDVSSFY--------LAAKPSIDFGPLHVYAKGGINAFN--------VEYNGNLSSLDKD 120
Query: 177 DGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHSVNNSNAKSDVER 224
DG S + G+G +Y + +ISL ASY+ + +S+ S +
Sbjct: 121 DG--VSYMYGVGAEYFLLDNISLGASYQ--AFGVDIDGDSDTVSSITG 164
>gi|226344175|gb|ACO48710.1| OmpA [Escherichia coli]
Length = 153
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 57/171 (33%), Gaps = 26/171 (15%)
Query: 75 TINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDSTFYRLKEK-YFIYG-DV 132
IN G G G+ Q+ +V G +K Y G +
Sbjct: 4 FINNNGPTHENQLGAGAFGGY--QVNPYV-GFEMGYDWLGRMPYKGSVKNGAYKAQGVQL 60
Query: 133 VLKAGYSV-DSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDY 191
K GY + D L IY G D N G+ G S V G++Y
Sbjct: 61 TAKLGYPITDDLDIYTRLGGMVWRA----------DTKSNVYGKNHDTGVSPVFAGGVEY 110
Query: 192 MVNYDISLSASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
+ +I+ Y++ + N +A + R D + SLG++ F
Sbjct: 111 AITPEIATRLEYQW------TNNIGDAHTIGTRPDN----GMLSLGVSYRF 151
>gi|161830628|ref|YP_001597252.1| hypothetical protein COXBURSA331_A1574 [Coxiella burnetii RSA 331]
gi|161762495|gb|ABX78137.1| conserved domain protein [Coxiella burnetii RSA 331]
Length = 259
Score = 34.8 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 71/215 (33%), Gaps = 35/215 (16%)
Query: 52 GIWSGNYVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQL-EDFVFGINCHT 110
+ G Y+G T P+ +++ Y + G +G + G+
Sbjct: 54 FEYQGTYLGGSF-----TVPIGSNVHQNGYTA------GGHIGLRYYFSNPWFLGLEFAA 102
Query: 111 TAAKDDSTFYRL---------------KEKYFIYGDVVLKAGYSVD-SLLIYGMGGFGGA 154
+++T + + D+ + G ++ +Y GG A
Sbjct: 103 MGNSENATTAESVLAPSPDDLIFNLVNQFRIKSNLDLTAQLGVNITPQTRVYIKGGASYA 162
Query: 155 YV--IDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSASYRYIPHHIHS 212
+ I + + + + + ++G GL Y + Y Y +
Sbjct: 163 RIRHILTVFNPATLTPTISLQRTTHKNRWGFLVGFGLGYDFFPWFGIFTEYNYYDYGRVG 222
Query: 213 VNN-----SNAKSDVERVDRKGNAHIASLGINMHF 242
+++ N +D + + +A+ LG+N++F
Sbjct: 223 LDSLSNIRPNNGADTYHQNVRVHAYSVLLGVNLNF 257
>gi|260553752|ref|ZP_05826023.1| DcaP protein [Acinetobacter sp. RUH2624]
gi|260405152|gb|EEW98651.1| DcaP protein [Acinetobacter sp. RUH2624]
Length = 438
Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Query: 142 SLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFDGHGSSVVLGIGLDYMVNYDISLSA 201
S L G + ++L + + S G GL Y + SL A
Sbjct: 243 SALPSLTGRYTFKQGPLTALAQGFINEKSADVATATVKKVSWGAGGGLKYQLTPQQSLQA 302
Query: 202 SYRYI--PHHIHSVNNSNAKSDVERVDRKGNAHI 233
+Y+YI + ++ ++ G+ +
Sbjct: 303 NYQYIVGDQKFMPYTTQSGLANSTSLNAAGDFSL 336
>gi|220904106|ref|YP_002479418.1| heat resistant agglutinin 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868405|gb|ACL48740.1| heat resistant agglutinin 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 225
Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 141 DSLLIYGMGGFGGAYVIDSSLEKVESDNSK-NAKGRFDGHGSSVVLGIGLDYMVNYDISL 199
DS L +GG G + +++ +K A RF LG G+ Y +N +L
Sbjct: 126 DSALTPYVGGGIGLAFNYTGYTFKDNNGNKFEADDRFTNFA--WNLGAGVSYDINESFTL 183
Query: 200 SASYRYIPHHIHSVNNSNAKSDVERVDRKGNAHIASLGINMHF 242
ASYR++ + V+++ E +R N +G+ F
Sbjct: 184 DASYRFVGLGYNEVSSTVNGIKYEVGNRPYNNEFM-IGLRYGF 225
>gi|149773177|dbj|BAF64763.1| outer membrane protein A [Shewanella livingstonensis]
Length = 385
Score = 34.8 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 10/177 (5%)
Query: 58 YVGLHISRLYETHPLADTINRKTYNSLLPNGLGIELGHNIQLEDFVFGINCHTTAAKDDS 117
YVG + P D K P + G+ ++V GI D
Sbjct: 42 YVGGGLGVNNY-EPSCDQKTMKVCGEDDPYAWDVFGGY--LFNEYV-GIELGYR----DL 93
Query: 118 TFYRLKEKYFIYGDVVLKAGYSVDSLLIYGMGGFGGAYVIDSSLEKVESDNSKNAKGRFD 177
+ DV + G S+ + Y + + + S+ + +
Sbjct: 94 GRAEWTDYSNKRNDVGAR-GMSLGFVGFYPLADKWSLSAEAGAFNYLISNKKEYNTEYYS 152
Query: 178 GHGSSVVLGIGLDYMVNYDISLSASY-RYIPHHIHSVNNSNAKSDVERVDRKGNAHI 233
G + LG G+ Y ++ L A Y RY N + +S+ ++
Sbjct: 153 DSGIAPYLGAGIGYNFTDNLKLQAKYRRYENLDEEKWNTLSMESNYWGLELSYRFGT 209
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.123 0.320
Lambda K H
0.267 0.0377 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,097,443,578
Number of Sequences: 14124377
Number of extensions: 151610902
Number of successful extensions: 491958
Number of sequences better than 10.0: 3531
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 2906
Number of HSP's that attempted gapping in prelim test: 482748
Number of HSP's gapped (non-prelim): 8917
length of query: 242
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 107
effective length of database: 2,936,002,735
effective search space: 314152292645
effective search space used: 314152292645
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 79 (35.2 bits)