HHsearch alignment for GI: 254781079 and conserved domain: COG1353

>COG1353 Predicted CRISPR-associated polymerase [Defense mechanisms].
Probab=96.55  E-value=0.023  Score=37.49  Aligned_cols=79  Identities=25%  Similarity=0.315  Sum_probs=62.2

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHC-CCC
Q ss_conf             3343036501686101234445899999863154067995689999999987799899899999999999999970-996
Q gi|254781079|r  175 LGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISSGPSIHITISAGIAERCHKEPISTIIYRADQALYVAKKS-GRN  253 (266)
Q Consensus       175 ~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~s~Gia~~~~~~~~~~ll~~Ad~Al~~AK~~-gkn  253 (266)
T Consensus       591 sGGDDvla~g~---~d~vld~a~el~~~F~~~~~~-----~~~~t~SaGi~i~h~k~Pl~~~~~~~~~~e~~AK~~r~k~  662 (799)
T COG1353         591 SGGDDVLAVGP---WDDVLDFAKELRELFSEFTGK-----NPKLTLSAGIVIVHHKFPLYFALREARELEEEAKENRGKN  662 (799)
T ss_pred             ECCCCEEEECC---HHHHHHHHHHHHHHHHHHHCC-----CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             66872478445---889999999999999998445-----8874157789980376809999999999999998740777


Q ss_pred             EEEECCHH
Q ss_conf             89994021
Q gi|254781079|r  254 RVVCFSDI  261 (266)
Q Consensus       254 ~~~~~~~~  261 (266)
T Consensus       663 ~i~~~~r~  670 (799)
T COG1353         663 AIGLFDRS  670 (799)
T ss_pred             EEEEECCC
T ss_conf             07997268