HHsearch alignment of GI: 254781079 and MMDB domain: 3gqc_A_1-96_213-314
>3gqc_A (A:1-96,A:213-314) DNA repair protein REV1; protein-DNA complex, alternative splicing, DNA damage, DNA repair, DNA synthesis; HET: DNA DOC DCP; 2.50A {Homo sapiens}
Probab=93.68 E-value=0.029 Score=36.18 Aligned_cols=94 Identities=20% Similarity=0.211 Sum_probs=65.6
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC-CHHHCCCCCCEEEEECCCCC---HHHHHHHHHHHHHH
Q ss_conf 972575544221000114688654443110000000111110-00000133430365016861---01234445899999
Q gi|254781079|r 127 EKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFGT-PMFVGRLGGEEFAAAALGSS---EQEAAILANDLRKI 202 (266)
Q Consensus 127 ~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~-~~~~~R~~gdeF~ill~~~~---~~~~~~~~~~l~~~ 202 (266)
..-.++=||+|||..+ ++++..+.+.+.. ...+-.++=||+.+=+++.. ...+..++.+|++.
T Consensus 86 ~~~~imhidmddf~~Y-------------~~~S~~i~~il~~y~p~iE~~SiDE~fiDlT~~~~~~~~~~~~~A~~IR~~ 152 (198)
T 3gqc_A 86 HQSCIMHVDMDDFHAY-------------KEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKLTPDEFANAVRME 152 (198)
T ss_dssp -CCCEEEEEETCHHHH-------------HHHHHHHHHHHHTTCSCEEEEETTEEEEECHHHHHHHCCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHH-------------HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCCHHHHHHHHHHH
T ss_conf 7718999805788999-------------999999999999868865125763068974564111289799999999875
Q ss_pred HHHCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 8631540679956899999999877998998999999999999999709
Q gi|254781079|r 203 IENSQINISSGPSIHITISAGIAERCHKEPISTIIYRADQALYVAKKSG 251 (266)
Q Consensus 203 l~~~~~~~~~~~~~~~t~s~Gia~~~~~~~~~~ll~~Ad~Al~~AK~~g 251 (266)
+.+. ..+++|+||+.. .-.|..|...+|-.|
T Consensus 153 I~~~---------tglt~SvGIa~N---------klLAKlAS~~aKPnG 183 (198)
T 3gqc_A 153 IKDQ---------TKCAASVGIGSN---------ILLARMATRKAKPDG 183 (198)
T ss_dssp HHHH---------HSCCEEEEEESS---------HHHHHHHHHHHCSSC
T ss_pred HHHC---------CCCCEEECCCCC---------HHHHHHHHHHHCCCC
T ss_conf 5640---------587121466450---------999999998615155