HHsearch alignment of GI: 254781079 and MMDB domain: 3icl_A_
>3icl_A (A:) EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=99.92 E-value=1.5e-25 Score=213.79 Aligned_cols=158 Identities=27% Similarity=0.402 Sum_probs=137.5
Q ss_pred CCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCC
Q ss_conf 0401050204899988877-------089725755442210001146886544431100000001111100000013343
Q gi|254781079|r 106 IDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFGTPMFVGRLGGE 178 (266)
Q Consensus 106 ~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~~~~~~R~~gd 178 (266)
.||||||+||++|.+++++ .+++++|+++|||+||.||+.|||+.||++|+.+|++|+..+++++.++|++++
T Consensus 1 ~D~LTGL~Nr~~f~~~l~~~l~~~~~~~~~~~l~~i~id~f~~in~~~G~~~gd~~l~~~a~~l~~~~~~~~~~~r~~~~ 80 (171)
T 3icl_A 1 XDTVTGLPNRQLFCDRLLQALAAHERDGNPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDGDTVARIGGD 80 (171)
T ss_dssp CCTTTCCCCHHHHHHHHHHHHHHCCCTTSCCEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHHHSCTTCEEEEETTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 94413723399999999999999885099289999805178999871199753047887656532035898889982598
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 03650168610123444589999986315406799568999999998779-98998999999999999999709968999
Q gi|254781079|r 179 EFAAAALGSSEQEAAILANDLRKIIENSQINISSGPSIHITISAGIAERC-HKEPISTIIYRADQALYVAKKSGRNRVVC 257 (266)
Q Consensus 179 eF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~~AK~~gkn~~~~ 257 (266)
+|++++|..+..+......+........+. ..++....+++|+|++.++ ++.++++++.+||.||+.||++|+|++++
T Consensus 81 ~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~g~~~~~~~~~~~~~l~~~A~~Al~~Ak~~g~~~i~~ 159 (171)
T 3icl_A 81 KFTILLNGAKDTLNGALVAQKILDGLAQPF-VFGAQQIVISVSIGIAVSPADGETXEQLLRNADTAXYHAKSRGKNNYQF 159 (171)
T ss_dssp EEEEEESSCTTSTTTHHHHHHHHHHHTSCE-EETTEEECCCEEEEEEETTTTCSSHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 899996899868999999999999998764-3202465650689999836999989999999999999999849998999
Q ss_pred CCHHHCC
Q ss_conf 4021005
Q gi|254781079|r 258 FSDIENN 264 (266)
Q Consensus 258 ~~~~~~~ 264 (266)
|++--++
T Consensus 160 y~~~~~~ 166 (171)
T 3icl_A 160 FSPELEH 166 (171)
T ss_dssp CCC----
T ss_pred ECHHHCC
T ss_conf 7757686