HHsearch alignment of GI: 254781079 and MMDB domain: 3ign_A_
>3ign_A (A:) Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=99.95 E-value=1.6e-28 Score=236.41 Aligned_cols=167 Identities=35% Similarity=0.544 Sum_probs=149.6
Q ss_pred HHHHHHHHCCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCH
Q ss_conf 999999610401050204899988877-------0897257554422100011468865444311000000011111000
Q gi|254781079|r 98 NRISQLSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQLVVVFGTPM 170 (266)
Q Consensus 98 ~~l~~~a~~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~~~ 170 (266)
+++++++++|||||||||++|.+++++ .+.++++++||||+||.|||.|||..||++|+.+|++|+..+++.+
T Consensus 2 q~l~~la~~D~LTgL~NR~~f~~~l~~~l~~~~~~~~~~~l~~idid~fk~ind~~G~~~gD~~l~~~a~~l~~~~~~~~ 81 (177)
T 3ign_A 2 EQLAKLSXTDRLTGLLNRGTWENLVDAEYERFRRYGQATSLVXFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNIRQSD 81 (177)
T ss_dssp ---CTTSSBCTTTCSEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 78998749652548555899999999999998850996799998443320024667807898988887777653045666
Q ss_pred HHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0001334303650168610123444589999986315406799568999999998779-989989999999999999997
Q gi|254781079|r 171 FVGRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISSGPSIHITISAGIAERC-HKEPISTIIYRADQALYVAKK 249 (266)
Q Consensus 171 ~~~R~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~s~Gia~~~-~~~~~~~ll~~Ad~Al~~AK~ 249 (266)
.++|++||+|++++++..........+++........+ ..++....+++|+|++.++ ++.++++++.+||.|||+||+
T Consensus 82 ~~~r~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~g~~~~~~~~~~~~~ll~~A~~Al~~AK~ 160 (177)
T 3ign_A 82 SAGRYGGEEFGIILPETDAESARVICERIREAIEKSTV-STSAGDIQYTVSXGIAQLTETPENYXQWXQKADEALYKAKE 160 (177)
T ss_dssp EEEECSSSEEEEEEETCCHHHHHHHHHHHHHHHHTCCE-ECSSCEECCCEEEEEEECCSCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC-CCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 52022588799997898989999999999999982765-45788731678899996479988899999999999999998
Q ss_pred CCCCEEEECCHHHCCC
Q ss_conf 0996899940210056
Q gi|254781079|r 250 SGRNRVVCFSDIENNT 265 (266)
Q Consensus 250 ~gkn~~~~~~~~~~~~ 265 (266)
+|+|++++|++--+++
T Consensus 161 ~G~n~~~~y~~~~~~~ 176 (177)
T 3ign_A 161 SGRNKVVVSLEHHHHH 176 (177)
T ss_dssp TTSSSEEECC------
T ss_pred HCCCEEEEEEECCCCC
T ss_conf 4999699988424447