HHsearch results for GI: 254781079 and protein with PDBid: 3hvw_A
>3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa}
Probab=99.82 E-value=1.1e-21 Score=183.07 Aligned_cols=155 Identities=14% Similarity=0.177 Sum_probs=124.4
Q ss_pred HCCCHHCCCCHHHHHHHHHHC---CCCEEEEEEEC---CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCC
Q ss_conf 104010502048999888770---89725755442---210001146886544431100000001111100000013343
Q gi|254781079|r 105 RIDCLSGLLNHSAFISSLGSY---NEKLSIVFFDI---DYFKQINDNFGHPVGDKVIAFLSDQLVVVFGTPMFVGRLGGE 178 (266)
Q Consensus 105 ~~D~LTgL~NR~~f~~~l~~~---~~~~~l~~idi---d~fk~iNd~~G~~~gD~~L~~va~~l~~~~~~~~~~~R~~gd 178 (266)
..|++||||||.+|.++++.. ..+++++.+++ ++|+.||+.||++.||.+|+.++++++... +++.++|+++|
T Consensus 1 ~~D~lTGL~Nr~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~G~~~~d~ll~~~~~~l~~~~-~~~~~~R~~~~ 79 (176)
T 3hvw_A 1 MIDEPTGLYNRLRLQEDVSLRLQRDGALTVIAADLLPLALLNTIIRTLGYPFSNDLMLEARDRIRAEL-PDFTLYKISPT 79 (176)
T ss_dssp --------CCHHHHHHHHHHHHHHHSEEEEEEEECSCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC-TTSCEEEEETT
T ss_pred CEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHC-CCCEEEEECCC
T ss_conf 98474473479999999999998489997899999875208899885085657999999999998714-47537997299
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCC-CCCH-HHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 036501686101234445899999863154067995689999999987799-8998-99999999999999970996899
Q gi|254781079|r 179 EFAAAALGSSEQEAAILANDLRKIIENSQINISSGPSIHITISAGIAERCH-KEPI-STIIYRADQALYVAKKSGRNRVV 256 (266)
Q Consensus 179 eF~ill~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~s~Gia~~~~-~~~~-~~ll~~Ad~Al~~AK~~gkn~~~ 256 (266)
||++++|..+.+++...++++...+... ....+..+.+++|+|++.++. +.+. +++++.|+.||+.||+.|+| ++
T Consensus 80 ~F~il~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~siGv~~~~~~~~~~~~~l~~~a~~Al~~Ak~~g~~-~~ 156 (176)
T 3hvw_A 80 RFGLLLPRQQQEETESVCLRLLRAFESP--VVCRGIPIKANVGLGVLPLADDTLDGDQDWLRLVVSAADDARDRGVG-WA 156 (176)
T ss_dssp EEEEEEEGGGGGGHHHHHHHHHHHTTSC--EEETTEEECCCCEEEEEEEEGGGTGGGSCCHHHHHHHHHHHHHHTCS-CE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCC--EEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC-EE
T ss_conf 8999968999899999999999998272--03678422240689999816998874999999999999999971999-89
Q ss_pred ECCHHHC
Q ss_conf 9402100
Q gi|254781079|r 257 CFSDIEN 263 (266)
Q Consensus 257 ~~~~~~~ 263 (266)
+|+.-.+
T Consensus 157 ~y~~~~~ 163 (176)
T 3hvw_A 157 RYNPPLD 163 (176)
T ss_dssp ECCCCSS
T ss_pred EECHHHH
T ss_conf 9881666