HHsearch results for GI: 254781079 and protein with PDBid: 3i5c_A
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*
Probab=99.95 E-value=7.3e-28 Score=230.31 Aligned_cols=174 Identities=33% Similarity=0.475 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHH-------CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCC
Q ss_conf 99999999999999610401050204899988877-------08972575544221000114688654443110000000
Q gi|254781079|r 90 LKELFISYNRISQLSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVIAFLSDQL 162 (266)
Q Consensus 90 ~~~l~~~~~~l~~~a~~D~LTgL~NR~~f~~~l~~-------~~~~~~l~~idid~fk~iNd~~G~~~gD~~L~~va~~l 162 (266)
..++.+..+++++++++|||||||||++|.++++. .+.++++++++||+|+.+|+.||++.+|.+++.+++++
T Consensus 16 ~~~l~~~~~~l~~la~~D~lTGL~NR~~f~~~l~~~l~~~~~~~~~~~l~~i~i~~~~~l~~~~G~~~~d~li~~~a~~l 95 (206)
T 3i5c_A 16 NYHLENEVARLKKLVNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAI 95 (206)
T ss_dssp HHHHHHHHHHHHTTCCBCTTTCSBCHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999999543866683508899999999999987339948999998983348873359755309999888888
Q ss_pred C-CCCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC-CCCCCEEEEEEEEEEEEC---CCCCCHHHHH
Q ss_conf 1-1111000000133430365016861012344458999998631540-679956899999999877---9989989999
Q gi|254781079|r 163 V-VVFGTPMFVGRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQIN-ISSGPSIHITISAGIAER---CHKEPISTII 237 (266)
Q Consensus 163 ~-~~~~~~~~~~R~~gdeF~ill~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~t~s~Gia~~---~~~~~~~~ll 237 (266)
. ...+.+++++|+++|+|+|++++.+.+++..+++++.+.+...... ........+++|+|++.+ .++.++++++
T Consensus 96 ~~~~~~~~d~v~R~~~d~Favl~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~vt~siGia~~~~~~~~~~~~~ll 175 (206)
T 3i5c_A 96 REGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLI 175 (206)
T ss_dssp HTTCCSTTCEEEEEETTEEEEEEETCCHHHHHHHHHHHHHHHHHTCCEECSSSTTEECCEEEEEEEECCCSTTCCTHHHH
T ss_pred HHHCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHH
T ss_conf 77425555444634887677663899989999999999999997305524677755416899999986799998799999
Q ss_pred HHHHHHHHHHHHCCCCEEEECCHHHC
Q ss_conf 99999999999709968999402100
Q gi|254781079|r 238 YRADQALYVAKKSGRNRVVCFSDIEN 263 (266)
Q Consensus 238 ~~Ad~Al~~AK~~gkn~~~~~~~~~~ 263 (266)
++||.||+.||++|||+|++|++...
T Consensus 176 ~~A~~AL~~AK~~G~n~i~~~~~~~~ 201 (206)
T 3i5c_A 176 EMADQALYQAKNNGRNQVGLMEQPVP 201 (206)
T ss_dssp HHHHHHHHHHHHTTSSSEEEC-----
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 99999999999868997999369999