RPSBLAST alignment for GI: 254781079 and conserved domain: TIGR00254
>gnl|CDD|161790 TIGR00254, GGDEF, diguanylate cyclase (GGDEF) domain. The GGDEF domain is named for the motif GG[DE]EF shared by many proteins carrying the domain. There is evidence that the domain has diguanylate cyclase activity. Several proteins carrying this domain also carry domains with functions relating to environmental sensing. These include PleD, a response regulator protein involved in the swarmer-to-stalked cell transition in Caulobacter crescentus, and FixL, a heme-containing oxygen sensor protein. Length = 165
Score = 122 bits (308), Expect = 9e-29
Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 103 LSRIDCLSGLLNHSAFISSLGS-------YNEKLSIVFFDIDYFKQINDNFGHPVGDKVI 155
+ D L+GL N L S + S++ DID FK+IND GH VGD+V+
Sbjct: 1 QAVRDPLTGLYNRRYLEEMLDSELKRARRFQRSFSVLMIDIDNFKKINDTLGHDVGDEVL 60
Query: 156 AFLSDQLVVVFGTPMFVGRLGGEEFAAAALGSSEQEAAILANDLRKIIENSQINISSGPS 215
++ L VGR GGEEF G+ ++A A LR I + I ++ +
Sbjct: 61 REVARILQSSVRGSDVVGRYGGEEFVVILPGTPLEDALSKAERLRDAINSKPIEVAGSET 120
Query: 216 IHITISAGIAERCHKEPIST---IIYRADQALYVAKKSGRNRVV 256
+ +T+S G+A C+ T ++ RAD+ALY AKK+GRNRVV
Sbjct: 121 LTVTVSIGVA--CYPGHGLTLEELLKRADEALYQAKKAGRNRVV 162