RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254781084|ref|YP_003065497.1| hypothetical protein
CLIBASIA_04930 [Candidatus Liberibacter asiaticus str. psy62]
         (59 letters)



>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
          photosynthetic reaction center, peripheral antenna;
          HET: CL1 PQN; 4.44A {Pisum sativum} (F:1-76)
          Length = 76

 Score = 23.9 bits (51), Expect = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 3/25 (12%)

Query: 35 EKNSSSESKSKADLNKMNAPDSLPS 59
          EK +    K +A L K+ A DS P+
Sbjct: 18 EKQALK--KLQASL-KLYADDSAPA 39


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.299    0.113    0.291 

Gapped
Lambda     K      H
   0.267   0.0605    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 332,687
Number of extensions: 8183
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 2
Length of query: 59
Length of database: 4,956,049
Length adjustment: 28
Effective length of query: 31
Effective length of database: 4,009,509
Effective search space: 124294779
Effective search space used: 124294779
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 50 (23.3 bits)