HHsearch alignment for GI: 254781085 and conserved domain: TIGR03321
>TIGR03321 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B. CC and in principle may run in either direction. This model represents the F0 subunit B of this apparent second ATP synthase.
Probab=99.94 E-value=5.7e-24 Score=157.65 Aligned_cols=158 Identities=13% Similarity=0.232 Sum_probs=149.6
Q ss_pred CCCCH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99798-999-9999999999999996228899999999999999999999999999999999999999999999999999
Q gi|254781085|r 1 MHFDE-TFL-VFMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILA 78 (173)
Q Consensus 1 m~~d~-tfw-~~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~ 78 (173)
T Consensus 1 M~idw~T~~~q~iNfliL~~lL-~rFl~~Pv~~~i~~R~~~I~~~l~~A~~~~~eA~~~~~~~e~~~~~~~~e~~~~l~~ 79 (246)
T TIGR03321 1 MLIDWFTVIAQLINFLILVWLL-KRFLYRPILDAMDAREKKIAGELADADTKKREAEQERREYEEKNEELDQQREVLLTK 79 (246)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9010999999999999999999-999688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999433999999999999999999
Q gi|254781085|r 79 AKHRAKILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIISQKMNDDVNSSIFEKTISSIQS 158 (173)
Q Consensus 79 a~~~a~~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~~~l~~~~~~~~I~~~i~~l~~ 158 (173)
T Consensus 80 A~~eAe~er~~ll~~Ar~eae~~r~~~~~~l~~E~~~~~~~l~~r~~~~~~~ia~k~L~~Lad~~le~~~v~~f~~rL~~ 159 (246)
T TIGR03321 80 AKEEAQAERQRLLDEAREEADEIREKWQEALRREQAALSDELRRRTGAEVFAIARKVLTDLADTDLEERMVDVFVQRLRT 159 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999999999866324799999999999871
Q ss_pred H
Q ss_conf 9
Q gi|254781085|r 159 C 159 (173)
Q Consensus 159 ~ 159 (173)
T Consensus 160 l 160 (246)
T TIGR03321 160 L 160 (246)
T ss_pred C
T ss_conf 9