HHsearch alignment for GI: 254781085 and conserved domain: pfam00430
>pfam00430 ATP-synt_B ATP synthase B/B' CF(0). Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria, thylakoid membrane in plants, cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006
Probab=99.92 E-value=1.1e-22 Score=150.24 Aligned_cols=131 Identities=23% Similarity=0.308 Sum_probs=124.3
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999-9999999999999996228899999999999999999999999999999999999999999999999999999999
Q gi|254781085|r 6 TFL-VFMSLIIFLVIVVYLRIPSILLSFLDAHADKIRDDIFEARRLREKSENILMQYKEKHSKVEEETREIILAAKHRAK 84 (173)
Q Consensus 6 tfw-~~i~f~il~~il~~~~~~~~i~~~l~~R~~~I~~~l~~A~~~~~~a~~~~~~~~~~l~~a~~ea~~i~~~a~~~a~ 84 (173)
T Consensus 1 tl~~qlI~F~il~~il~~~-~~~pi~~~l~~R~~~I~~~l~~a~~~~~ea~~~~~~~e~~l~~a~~ea~~i~~~a~~~a~ 79 (132)
T pfam00430 1 TLETNLINFLILVGLLIYF-GYKPLGKILDERKEKIANNIKEAEERLKQAAALLAEAEQQLAQARAEASEIINNAKKEAQ 79 (132)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9888999999999999999-798899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999
Q gi|254781085|r 85 ILAEEGCQNIEQISALYLKDLEQKIHYMKLEAKRLLYAKIADFSVEIVREIIS 137 (173)
Q Consensus 85 ~~~e~~~~~a~~~~~~~~~~a~~~I~~~~~~a~~~l~~~~~~la~~~~~kil~ 137 (173)
T Consensus 80 ~~~~~~~~~a~~e~~~~~~~a~~~i~~e~~~a~~~l~~e~~~la~~~aekilG 132 (132)
T pfam00430 80 KLKEEILAEAQKDAERLLESARAEIEQEKEQALAELRQQVAALAVQIAEKLLG 132 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999999999999999999999976559