HHsearch alignment for GI: 254781086 and conserved domain: CHL00118
>CHL00118 atpG ATP synthase CF0 B' subunit; Validated.
Probab=99.96 E-value=1.6e-27 Score=189.92 Aligned_cols=147 Identities=17% Similarity=0.228 Sum_probs=139.8
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64533468998859887688999999999999999999955408999999999999999999999999999999999999
Q gi|254781086|r 4 SSSSDFSSRFPPFDTSTFLSQFFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEESL 83 (176)
Q Consensus 4 ~~~~~~~~gmpqld~~~f~~q~fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~l 83 (176)
T Consensus 9 ~~a~~~~~~~~~~n~Tl~-----~q~i~FliL~~lL~kf~~~Pi~~~ld~R~~~I~~~l~~Ae~~~~ea~~~~~eye~~L 83 (156)
T CHL00118 9 IEAEEPEGGLFDFNATLP-----LMALQFLLLMVLLNAIFYKPIGKILDEREEYIRSNLAKASSKLAKANELTAQYEEQL 83 (156)
T ss_pred HHHHCCCCCCCCCCHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 986444488708658999-----999999999999999989899999999999999889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999999999999999999999999999999999999984
Q gi|254781086|r 84 AIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLGF 155 (176)
Q Consensus 84 ~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~~ 155 (176)
T Consensus 84 ~~Ar~Ea~~ii~~A~~~a~~~~~~i~~~A~~ea~~~i~~A~~eIe~ek~~a~~el~~ev~~la~~ia~Kil~ 155 (156)
T CHL00118 84 SKARKEAQLLIAQSQKEAQEIVQEELKQAQKNAESLVEEATKQLEIQKEQALKSLESQVDTLSDQIKSKLLS 155 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999999999999999999999999999999999999999999999999999999998758