HHsearch alignment for GI: 254781086 and conserved domain: CHL00118
>CHL00118 atpG ATP synthase CF0 B' subunit; Validated.
Probab=98.51 E-value=7.7e-05 Score=49.80 Aligned_cols=116 Identities=12% Similarity=0.128 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999554089999999999999999999999999999999999999999999999999999999999
Q gi|254781086|r 26 FWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEESLAIARAHAKEIIDKVVAAAEQNL 105 (176)
Q Consensus 26 fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~l~eak~ea~~ii~~a~~~a~~~~ 105 (176)
T Consensus 23 ~Tl~~q~-i~FliL~~lL~kf~~~---Pi~~~ld~R~~~I~~~l~~Ae~~~~e----a~~~~~eye~~L~~Ar~Ea~~ii 94 (156)
T CHL00118 23 ATLPLMA-LQFLLLMVLLNAIFYK---PIGKILDEREEYIRSNLAKASSKLAK----ANELTAQYEEQLSKARKEAQLLI 94 (156)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999-9999999999999898---99999999999999889999999999----99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999
Q gi|254781086|r 106 EFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDL 149 (176)
Q Consensus 106 e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i 149 (176)
T Consensus 95 ~~A~~~a~~~~~~i~~~A~~ea~~~i~~A~~eIe~ek~~a~~el 138 (156)
T CHL00118 95 AQSQKEAQEIVQEELKQAQKNAESLVEEATKQLEIQKEQALKSL 138 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999