HHsearch alignment for GI: 254781086 and conserved domain: PRK06568
>PRK06568 F0F1 ATP synthase subunit B; Validated.
Probab=98.24 E-value=0.00046 Score=45.00 Aligned_cols=117 Identities=17% Similarity=0.179 Sum_probs=91.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH----HHHHHHHHH
Q ss_conf 98859887688999999999999999999955408999999999999999---99999999999999----999999999
Q gi|254781086|r 13 FPPFDTSTFLSQFFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQ---EKMDSAKREVESMI----SSYEESLAI 85 (176)
Q Consensus 13 mpqld~~~f~~q~fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l---~~A~~~~~eae~~~----~~~e~~l~e 85 (176)
T Consensus 1 ~~fiDatFWVaIS--F~IFv~Liy~k~pk~I~~~LD~kI~eIK~~ideAekLkeEAk~lL~e~ekKi~~~~~e~~emI~~ 78 (154)
T PRK06568 1 MNFLDESFWLAVS--FVIFVYLIYRPAKKAILNSLDAKILEVQEKVLKAEKLKEDAALLFEQTNAQIKKLETLRSQMIEE 78 (154)
T ss_pred CCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9975406999999--99999999987589999889999999999998999878999999999999998789999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999999999999999
Q gi|254781086|r 86 ARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQ 131 (176)
Q Consensus 86 ak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k 131 (176)
T Consensus 79 Ak~~aEk~i~~~~kk~~~~~e~kkk~A~~kI~Q~K~~AikdIkn~~ 124 (154)
T PRK06568 79 SNEVTKKIIQEKTKEIEEFLEHKKSDAIQLIQNQKSTASKELQDEF 124 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6899999999999999999998898699999999999999999999