HHsearch alignment for GI: 254781086 and conserved domain: PRK06669
>PRK06669 fliH flagellar assembly protein H; Validated.
Probab=91.98 E-value=0.99 Score=24.42 Aligned_cols=107 Identities=11% Similarity=0.106 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999-999999999999999999999999999---9999999999999
Q gi|254781086|r 69 KREVESMISSYEESLAIARAHAKEIIDKVVAAAEQN-LEFQREVFEKDLLHKLSNAQNEIDDMQ---KKASQEVYSIVGE 144 (176)
Q Consensus 69 ~~eae~~~~~~e~~l~eak~ea~~ii~~a~~~a~~~-~e~~~~~a~~ei~~~~~~a~~~I~~~k---~~a~~ei~~~a~~ 144 (176)
T Consensus 83 ~dels~~~~klq~~ie~~e~e~~~~le~a~~eG~eeG~e~G~~ea~~e~~~~i~~~~~ile~~~~~~~~~l~~~E~elv~ 162 (268)
T PRK06669 83 EDELSSSRIKLEMQIEEAEEERKRLLEEAKAEGYEEGYEEGFEKAREEFQKLIDELKAILEEAIDEREEILESSEEEIVE 162 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 47753508999999999999999999999999999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHH-H--HCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999999998-4--15999999999999942106
Q gi|254781086|r 145 VTKDLVRKLG-F--SVSDADVQKILDRKRDGIDA 175 (176)
Q Consensus 145 ~a~~i~~kl~-~--~~~~~~~~~~i~~~~~~i~~ 175 (176)
T Consensus 163 lal~IAkkVI~~~~~~~~~i~~~lvk~~l~evk~ 196 (268)
T PRK06669 163 LALDIAKKVIKEISENSKEVALALVKELLKEVKD 196 (268)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999705899999999999997313