HHsearch alignment for GI: 254781086 and conserved domain: PRK06937

>PRK06937 type III secretion system protein; Reviewed.
Probab=95.05  E-value=0.28  Score=27.77  Aligned_cols=100  Identities=18%  Similarity=0.087  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999999999999999999999999999999999999999999984
Q gi|254781086|r   76 ISSYEESLAIARAHAKEIIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLGF  155 (176)
Q Consensus        76 ~~~~e~~l~eak~ea~~ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~~  155 (176)
T Consensus        29 ~~~A~~ile~A~~~A~~i~~~A~~~~e~~~~~Gy~eG~~ea~~e~ae~i~~~~~~~~~~~~~le~~l~~lv~~av~kIlg  108 (204)
T PRK06937         29 LLSAEELVEAARQRAAEIEAEAREVYEQQKQLGYEAGLDEARTEQAELILETVLQCQEFYRGIEQQMSEVVLEAVRKILN  108 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             84399999999999999999999999999999999999999999999999999999999999999999999999999865


Q ss_pred             HCCHH-HHHHHHHHHHHHHHC
Q ss_conf             15999-999999999942106
Q gi|254781086|r  156 SVSDA-DVQKILDRKRDGIDA  175 (176)
Q Consensus       156 ~~~~~-~~~~~i~~~~~~i~~  175 (176)
T Consensus       109 ~~d~~el~~~~v~~al~~v~~  129 (204)
T PRK06937        109 DYDDVERTLQVVREALALVSN  129 (204)
T ss_pred             CCCHHHHHHHHHHHHHHHHHC
T ss_conf             468389999999999999735