HHsearch alignment for GI: 254781086 and conserved domain: PRK08476
>PRK08476 F0F1 ATP synthase subunit B'; Validated.
Probab=99.94 E-value=1.1e-24 Score=172.41 Aligned_cols=138 Identities=20% Similarity=0.272 Sum_probs=131.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98859887688999999999999999999955408999999999999999999999999999999999999999999999
Q gi|254781086|r 13 FPPFDTSTFLSQFFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEESLAIARAHAKE 92 (176)
Q Consensus 13 mpqld~~~f~~q~fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~l~eak~ea~~ 92 (176)
T Consensus 2 ml~~n~~----~~i~~~i~FliL~~iL~kflykPi~k~ld~R~~~I~~~l~~A~~~~~ea~~l~~e~e~~L~~Ar~ea~~ 77 (141)
T PRK08476 2 MLDINPY----LMLLTFVVFLLLIVILNSWLYKPLLKFMDNRNASIKNDLEKVKTNSSESVEINAEIEAILKNAREEANK 77 (141)
T ss_pred CCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6577677----999999999999999999958789999999999999889999998999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999998
Q gi|254781086|r 93 IIDKVVAAAEQNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLG 154 (176)
Q Consensus 93 ii~~a~~~a~~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~ 154 (176)
T Consensus 78 ii~~A~~~A~~~~~~~~~~Ar~eae~~~~~a~~~ie~ek~~a~~~L~~qv~~Ls~~ia~Ki~ 139 (141)
T PRK08476 78 IRQEAIAAAKEEAEQKIEAKKEELESKYEAFAQQLANQKQELKEQLLSQMPEFKEALNAKLS 139 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999889999999998673