HHsearch alignment for GI: 254781086 and conserved domain: TIGR02499
>TIGR02499 HrpE_YscL_not type III secretion apparatus protein, HrpE/YscL family; InterPro: IPR012842 This entry is related to IPR009335 from INTERPRO, but is broader. IPR009335 from INTERPRO describes HrpE-like proteins, components of bacterial type III secretion systems primarily in bacteria that infect plants. This entry also includes the homologous proteins of animal pathogens, such as YscL of Yersinia pestis. This entry excludes the related protein FliH of the bacterial flagellar apparatus (see IPR000563 from INTERPRO)..
Probab=91.17 E-value=1.2 Score=23.90 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999--99999999999999999999999999999999999999999999998
Q gi|254781086|r 77 SSYEESLAIARAHAKEIIDKVVAAAEQNLEF--QREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLG 154 (176)
Q Consensus 77 ~~~e~~l~eak~ea~~ii~~a~~~a~~~~e~--~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~ 154 (176)
T Consensus 17 ~~A~~il~~A~~~A~~~~~~A~e~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~l 96 (183)
T TIGR02499 17 ARAQAILAAARQRAEAILADAEEEAEASRQLLKGYEQGLEQFWQEAAAQLVEWQQEAEQLEASLEERLAELVLQALEQIL 96 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 84999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred HHC----CHH-HHHHHHHHHHHHH
Q ss_conf 415----999-9999999999421
Q gi|254781086|r 155 FSV----SDA-DVQKILDRKRDGI 173 (176)
Q Consensus 155 ~~~----~~~-~~~~~i~~~~~~i 173 (176)
T Consensus 97 ~~~~~qQ~~~~~~~~~lr~~~~~~ 120 (183)
T TIGR02499 97 GETLGQQDESERLVRLLRQLLAAV 120 (183)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 563358998899999999999987