HHsearch alignment for GI: 254781086 and conserved domain: pfam00430
>pfam00430 ATP-synt_B ATP synthase B/B' CF(0). Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria, thylakoid membrane in plants, cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006
Probab=99.91 E-value=2.9e-22 Score=157.43 Aligned_cols=131 Identities=24% Similarity=0.233 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999955408999999999999999999999999999999999999999999999999999999999
Q gi|254781086|r 25 FFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEESLAIARAHAKEIIDKVVAAAEQN 104 (176)
Q Consensus 25 ~fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~l~eak~ea~~ii~~a~~~a~~~ 104 (176)
T Consensus 2 l~~qlI~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~a~~~~~ea~~~~~~~e~~l~~a~~ea~~i~~~a~~~a~~~ 81 (132)
T pfam00430 2 LETNLINFLILVGLLIYFGYKPLGKILDERKEKIANNIKEAEERLKQAAALLAEAEQQLAQARAEASEIINNAKKEAQKL 81 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88899999999999999979889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999999999999999984
Q gi|254781086|r 105 LEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLGF 155 (176)
Q Consensus 105 ~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~~ 155 (176)
T Consensus 82 ~~~~~~~a~~e~~~~~~~a~~~i~~e~~~a~~~l~~e~~~la~~~aekilG 132 (132)
T pfam00430 82 KEEILAEAQKDAERLLESARAEIEQEKEQALAELRQQVAALAVQIAEKLLG 132 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999999999999999999999999999999976559