HHsearch alignment for GI: 254781086 and conserved domain: pfam05405

>pfam05405 Mt_ATP-synt_B Mitochondrial ATP synthase B chain precursor (ATP-synt_B). The Fo sector of the ATP synthase is a membrane bound complex which mediates proton transport. It is composed of nine different polypeptide subunits (a, b, c, d, e, f, g F6, A6L).
Probab=98.95  E-value=1.6e-06  Score=60.22  Aligned_cols=145  Identities=12%  Similarity=0.113  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999554089999999999999999999999999999999999999999999999999999999999
Q gi|254781086|r   26 FWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEESLAIARAHAKEIIDKVVAAAEQNL  105 (176)
Q Consensus        26 fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~l~eak~ea~~ii~~a~~~a~~~~  105 (176)
T Consensus        17 ~~val~fi~f~~~~~K~~G~~i~~~lD~~~e~i~~~l~~~r~~~~~a~~~~ie~~k~~~~~~~~~~~l~~~~ke~~al~~   96 (163)
T pfam05405        17 TIVALCFIGFLIFVYKSLGPSIKEWLDKRIEKIQDELNQSRNLHEKALKERIEYVKKLQSVVEETKVLFEVSKETVALEA   96 (163)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999998108899999998999999999888878999999999999999999989999998246799777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999999999999984159999-999999999421
Q gi|254781086|r  106 EFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLGFSVSDAD-VQKILDRKRDGI  173 (176)
Q Consensus       106 e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~~~~~~~~-~~~~i~~~~~~i  173 (176)
T Consensus        97 e~~~~~~~~~v~~e---vk~~Ld~~v~~e~~~r~~~Q~~~v~~v~~~V~~~i~~~~~~k~~l~~~I~~l  162 (163)
T pfam05405        97 EAFERELQAALARE---IKSKLDTLVRKESSVRQREQDHLVNWVISSVLKELSPPKFQKKSLQESIADL  162 (163)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             99999999999999---9999999999998999999999999999999987079167999999998860