HHsearch alignment of GI: 254781086 and MMDB domain: 2cly_A_
>2cly_A (A:) ATP synthase B chain, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus}
Probab=99.82 E-value=6.1e-19 Score=136.52 Aligned_cols=150 Identities=11% Similarity=-0.019 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999554089999999999999999999999999999999999999999999999999999999
Q gi|254781086|r 23 SQFFWLAIIFGIFYWVTHRFILPRLSSIMEVRRNLISSDQEKMDSAKREVESMISSYEESLAIARAHAKEIIDKVVAAAE 102 (176)
Q Consensus 23 ~q~fw~~I~F~il~~il~~~~~~pi~~~l~~R~~~I~~~l~~A~~~~~eae~~~~~~e~~l~eak~ea~~ii~~a~~~a~ 102 (176)
+--||.+|+|++|++++++|+||||.+++|+|.+.|.+++++|+..+.++.+...+|++.+.+++.++..|++.++..+.
T Consensus 54 n~e~~~~i~F~i~~~l~~k~~~~~i~~~ld~R~~~I~~~l~~a~~~~~ea~~~~~e~~~~l~~~~~~~~~I~~~ake~a~ 133 (214)
T 2cly_A 54 TPETFSAISTIGFLVYIVKKYGASVGEFADKLNEQKIAQLEEVKQASIKQIQDAIDMEKSQQALVQKRHYLFDVQRNNIA 133 (214)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 80799999999999999999899999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999999999999999999999999999999999998415999999999999942106
Q gi|254781086|r 103 QNLEFQREVFEKDLLHKLSNAQNEIDDMQKKASQEVYSIVGEVTKDLVRKLGFSVSDADVQKILDRKRDGIDA 175 (176)
Q Consensus 103 ~~~e~~~~~a~~ei~~~~~~a~~~I~~~k~~a~~ei~~~a~~~a~~i~~kl~~~~~~~~~~~~i~~~~~~i~~ 175 (176)
...+....+...++.+.+.++...+...+..+...+++.+++.+...+.+ .++....++++++++.+++.
T Consensus 134 ~~~E~~~~e~~~~~~~~~k~~ld~~~~~e~~~r~~~q~~~v~~v~~~v~k---~i~~~~~~~li~~~I~~L~~ 203 (214)
T 2cly_A 134 MALEVTYRERLHRVYREVKNRLDYHISVQNMMRQKEQEHMINWVEKRVVQ---SISAQQEKETIAKCIADLKL 203 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999998---75888899999999999998