HHsearch alignment for GI: 254781087 and conserved domain: PRK08482
>PRK08482 F0F1 ATP synthase subunit C; Validated.
Probab=99.86 E-value=2.4e-21 Score=127.30 Aligned_cols=85 Identities=20% Similarity=0.318 Sum_probs=78.8
Q ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88998753023----599999999999999-9987478999999999999982378789879999999999999999999
Q gi|254781087|r 6 MEAATFAAANG----YYSLAAKYVAVGMAC-LGMGLVALAVSNIFTTYLSGAFRNPCAASAHKTEVLIFAVIAESLGLFL 80 (91)
Q Consensus 6 ~~~~~~~a~~~----~~a~aak~IGAGlA~-ig~~G~giGiG~if~~~i~~vaRNP~~~~~l~~~~ilG~Al~Ea~glfa 80 (91)
T Consensus 11 ~a~~Afa~e~~~~~~~~I~a~SilaaGl~~gl~AiG~aiG~G~aa~~ai~g~ARnP~~~~kl~tTmfi~LAmIEa~~IY~ 90 (105)
T PRK08482 11 LAGVAFAADGGMGGMDMIKSYSVLAAGIGLGIAALGGAIGMGNTAAATIAGTARNPGLGGKLMTTMFIALAMIEAQVIYA 90 (105)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998760478633789999999999999999973325556588999999874298510117999999999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999970
Q gi|254781087|r 81 LLVVMLLLFV 90 (91)
Q Consensus 81 lviA~lllFa 90 (91)
T Consensus 91 lVialillfA 100 (105)
T PRK08482 91 LVIALIALYA 100 (105)
T ss_pred HHHHHHHHHC
T ss_conf 9999999972