HHSEARCH alignment of GI: 254781087 and SCOP domain: d1c99a_

Alignment

Probab=99.90  E-value=5.3e-24  Score=138.41  Aligned_cols=76  Identities=16%  Similarity=0.276  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             3599999999999999-998747899999999999998237878987999999999999999999999999999709
Q gi|254781087|r   16 GYYSLAAKYVAVGMAC-LGMGLVALAVSNIFTTYLSGAFRNPCAASAHKTEVLIFAVIAESLGLFLLLVVMLLLFVI   91 (91)
Q Consensus        16 ~~~a~aak~IGAGlA~-ig~~G~giGiG~if~~~i~~vaRNP~~~~~l~~~~ilG~Al~Ea~glfalviA~lllFav   91 (91)
                      ++......++++|+++ ++.+|+|+|+|+++++++|+++||||+++++++++++|++++|+++||+++++++++|++
T Consensus         2 e~~~~~~~~l~agl~~gl~aiG~giG~G~~~~~ale~~ARqPE~~~~l~~~m~ig~al~Ea~~i~~lvialillFa~   78 (79)
T d1c99a_           2 ENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAV   78 (79)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             34888899999999999998787887999999999998559317776999999999999999999999999999980

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Transmembrane helix hairpin
superfamily: F1F0 ATP synthase subunit C
family: F1F0 ATP synthase subunit C
domain: F1F0 ATP synthase subunit C
species: Escherichia coli [TaxId: 562]