HHsearch alignment for GI: 254781088 and conserved domain: KOG4665
>KOG4665 consensus.
Probab=100.00 E-value=0 Score=335.10 Aligned_cols=245 Identities=36% Similarity=0.646 Sum_probs=215.4
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHH-----HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98764467312450001424834641089-----9999999999999999831465537886403567788756787752
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNS-----SLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCD 75 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~-----~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~ 75 (250)
T Consensus 1 ~i~spl~qfe~~~~~~-~~~n~~~~f~~~~l~~~~~~t~v~l~~i~~~~~~~~~~~~~ips~~n~~~e~il~~l~~l~k~ 79 (252)
T KOG4665 1 MITSPLDQFEIEILFG-VLQNFYFDFSNFNLFAQSLLTLVVLLIILGFVTLAGSNNKTIPSRWNILVEAILDFLLNLFKT 79 (252)
T ss_pred CCCCHHHHCEEEEEEH-HHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9787465012011111-000224643657899999999999999999998456566456268999999999999999987
Q ss_pred HCCC-CCC-CCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 0576-675-30258999999851232323012454431035542146799999999999841586421113899998754
Q gi|254781088|r 76 SAGN-QSK-NFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLI 153 (250)
Q Consensus 76 ~~g~-~~~-~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l 153 (250)
T Consensus 80 qig~~~~~~~~~p~i~slFlfIl~~Nl~Glipysf~~t~~l~~tlala~~iwlg~~i~gl~sh~~~~fa~f~p~Gtp~pL 159 (252)
T KOG4665 80 QIGGSKGNVMYFPFIISLFLFILFCNLLGLIPYSFTPTSHLGFTLALAISIWLGTTILGLQSHGLHFFAYFLPAGTPLPL 159 (252)
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCH
T ss_conf 50688997301149999999999997750236230541689999999999999999999997150433677789996540
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30233356776544133333577787776899999999999999987889999999999999999999999999999999
Q gi|254781088|r 154 KPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIF 233 (250)
Q Consensus 154 ~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF 233 (250)
T Consensus 160 ~p~lvlIE~iS~~~r~lsL~vRL~aNi~aGHLl~~iL~~~~~~~m~~nli~l~i~~~--~~ilal~~LE~~va~IQaYVF 237 (252)
T KOG4665 160 IPFLVLIETISYLIRPLSLGVRLTANILAGHLLMNILGGLLFTMMLMNLIFLVIGAI--FIILALTMLELAVAIIQAYVF 237 (252)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_conf 579999999998724245676741358889999999988899999988999999999--999999999999999999999
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 999999973340103
Q gi|254781088|r 234 MVLACVYIGDVYRSD 248 (250)
Q Consensus 234 ~~Lt~~Yi~~a~~~~ 248 (250)
T Consensus 238 aiL~~lYl~d~~~lh 252 (252)
T KOG4665 238 AILIALYLNDSMNLH 252 (252)
T ss_pred HHHHHHHHCCCCCCC
T ss_conf 999999952011379