HHsearch alignment for GI: 254781088 and conserved domain: MTH00120
>MTH00120 ATP6 ATP synthase F0 subunit 6; Provisional.
Probab=100.00 E-value=0 Score=362.14 Aligned_cols=226 Identities=26% Similarity=0.454 Sum_probs=194.7
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
T Consensus 1 Mm~nlFs~Fd~~~~--------------~~~~l~~-~~~~i~~~~~~~~~~~~ip~r~~~~~e~~~~~i~~~i~~~~~~~ 65 (227)
T MTH00120 1 MNLNFFDQFSSPEL--------------LGIPLIL-LALLIPTLLLPTPNNRWLTNRLSTLQSWLIKLITKQLMLPLNKT 65 (227)
T ss_pred CCHHHCCCCCCCHH--------------HHHHHHH-HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 95411266799476--------------4899999-99999999998364200581999999999999999999770736
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
T Consensus 66 ~~~~~p~l~tlF~fIl~~Nl~GliP~~ft~Ts~l~~t~~LAl~~w~~~~~~g~~~~~~~~~~~~~P~G~P~~L~p~mv~I 145 (227)
T MTH00120 66 GHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALALPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILI 145 (227)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 54359999999999999999771066888504599999999999999999999992557768746887733899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
T Consensus 146 E~iS~liRPltLsvRL~aNm~AGHlll~l~~~~~~~~~~~---~~~~~~~~~~~~~~l~~lE~~Va~IQAYVFt~L~~lY 222 (227)
T MTH00120 146 ETISLLIRPLALGVRLTANLTAGHLLIQLISTATLALLPT---MPTLSILTMIILLLLTILELAVAMIQAYVFVLLLSLY 222 (227)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988589999999999998499999999999999999---9999999999999999999999999999999999999
Q ss_pred HHHH
Q ss_conf 7334
Q gi|254781088|r 241 IGDV 244 (250)
Q Consensus 241 i~~a 244 (250)
T Consensus 223 i~E~ 226 (227)
T MTH00120 223 LQEN 226 (227)
T ss_pred HCCC
T ss_conf 4354