HHsearch alignment for GI: 254781088 and conserved domain: MTH00175
>MTH00175 ATP6 ATP synthase F0 subunit 6; Provisional.
Probab=100.00 E-value=0 Score=449.64 Aligned_cols=242 Identities=37% Similarity=0.693 Sum_probs=219.0
Q ss_pred CCCCCHHHHCCCCEEEEEECC--EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 987644673124500014248--346410899999999999999999831465537886403567788756787752057
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQG--FDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAG 78 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~--~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g 78 (250)
T Consensus 1 m~~spleQF~i~~l~~~~~~~~~~~~t~tn~~l~~~l~~~~~----~l~~~~~~lvP~r~Q~~~E~i~~fv~~~v~~~iG 76 (244)
T MTH00175 1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVMMF----WLLLKGDKLIPNRWQSVMELIHLNIRSVVHDNLG 76 (244)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999821027886136767444431011589999999999999----9983689825749899999999999999998708
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 66753025899999985123232301245443103554214679999999999984158642111389999875430233
Q gi|254781088|r 79 NQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVC 158 (250)
Q Consensus 79 ~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~ 158 (250)
T Consensus 77 ~~g~k~~P~i~tlF~fIl~~Nl~GliP~~~~pTs~~~vt~~Lal~~~~~~~~~g~~~~g~~~~~~f~P~G~P~~l~pll~ 156 (244)
T MTH00175 77 KSGEKYFPFVLSLFLFIAMLNILGLFPYVFTPTAHIVVTFGLSLSILIAVTLLGFLTFKWNFLSIFMPGGAPLVLAPFLV 156 (244)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 67664599999999999999998701658676410675599999999999999999906554223579996199999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35677654413333357778777689999999999999998788999999999999999999999999999999999999
Q gi|254781088|r 159 FIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLAC 238 (250)
Q Consensus 159 ~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~ 238 (250)
T Consensus 157 ~IE~is~l~RPisL~lRLfaNm~AGhlll~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lEl~Va~iQAYVF~lLt~ 234 (244)
T MTH00175 157 IIETLSYLIRAISLGVRLAANITAGHLLFAIISGFTFNMLSNGL--LFLSLFPMLIMIFITLLEMAVAVIQAYVFCLLTT 234 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998702799999999999869999999999999998889--9999999999999999999999999999999999
Q ss_pred HHHHHHCCCC
Q ss_conf 9973340103
Q gi|254781088|r 239 VYIGDVYRSD 248 (250)
Q Consensus 239 ~Yi~~a~~~~ 248 (250)
T Consensus 235 ~Yi~~av~~H 244 (244)
T MTH00175 235 IYLGDTIALH 244 (244)
T ss_pred HHHHHHHHCC
T ss_conf 9998777439