Query gi|254781088|ref|YP_003065501.1| F0F1 ATP synthase subunit A [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 250
No_of_seqs 118 out of 2678
Neff 7.0
Searched_HMMs 39220
Date Mon May 30 04:31:07 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781088.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 MTH00175 ATP6 ATP synthase F0 100.0 0 0 449.6 21.2 242 1-248 1-244 (244)
2 MTH00174 ATP6 ATP synthase F0 100.0 0 0 443.7 21.6 245 1-248 1-252 (252)
3 PRK13416 consensus 100.0 0 0 436.7 22.5 246 3-250 16-267 (268)
4 PRK13419 F0F1 ATP synthase sub 100.0 0 0 428.6 18.9 241 2-250 78-325 (335)
5 MTH00172 ATP6 ATP synthase F0 100.0 0 0 406.2 19.5 232 1-248 1-232 (232)
6 PRK13421 F0F1 ATP synthase sub 100.0 0 0 405.0 19.8 220 2-250 1-221 (231)
7 COG0356 AtpB F0F1-type ATP syn 100.0 0 0 399.9 19.3 238 2-248 4-246 (246)
8 PRK13420 F0F1 ATP synthase sub 100.0 0 0 397.8 19.3 217 7-249 4-222 (230)
9 CHL00046 atpI ATP synthase CF0 100.0 0 0 395.1 20.1 221 6-249 8-239 (239)
10 PRK05815 F0F1 ATP synthase sub 100.0 0 0 391.3 20.7 231 3-246 2-235 (235)
11 PRK13417 F0F1 ATP synthase sub 100.0 0 0 385.1 20.3 227 17-248 85-352 (352)
12 pfam00119 ATP-synt_A ATP synth 100.0 0 0 380.7 20.3 215 25-243 2-217 (217)
13 TIGR03306 altF1_A alternate F1 100.0 0 0 370.9 20.1 210 13-246 5-217 (217)
14 MTH00101 ATP6 ATP synthase F0 100.0 0 0 363.5 18.8 225 1-244 1-225 (226)
15 MTH00120 ATP6 ATP synthase F0 100.0 0 0 362.1 18.9 226 1-244 1-226 (227)
16 MTH00035 ATP6 ATP synthase F0 100.0 0 0 357.5 18.5 205 37-245 25-229 (229)
17 MTH00073 ATP6 ATP synthase F0 100.0 0 0 356.1 16.3 227 1-245 1-227 (227)
18 MTH00179 ATP6 ATP synthase F0 100.0 0 0 351.4 19.5 201 42-245 27-227 (227)
19 PRK13418 consensus 100.0 0 0 345.4 19.1 212 14-246 48-284 (284)
20 MTH00132 ATP6 ATP synthase F0 100.0 0 0 345.8 16.7 227 1-245 1-227 (227)
21 MTH00176 ATP6 ATP synthase F0 100.0 0 0 343.1 18.5 195 44-244 29-223 (224)
22 MTH00173 ATP6 ATP synthase F0 100.0 0 0 338.0 19.3 206 37-244 24-229 (231)
23 MTH00146 consensus 100.0 0 0 336.8 19.7 205 37-243 24-228 (231)
24 KOG4665 consensus 100.0 0 0 335.1 21.3 245 1-248 1-252 (252)
25 MTH00005 ATP6 ATP synthase F0 100.0 0 0 338.2 18.1 197 44-243 33-229 (231)
26 MTH00157 ATP6 ATP synthase F0 100.0 0 0 328.9 17.3 193 46-244 31-224 (225)
27 MTH00089 consensus 100.0 0 0 279.5 12.5 167 64-244 16-182 (183)
28 TIGR01131 ATP_synt_6_or_A ATP 100.0 0 0 256.0 18.0 231 5-245 1-234 (234)
29 MTH00087 ATP6 ATP synthase F0 100.0 0 0 259.1 13.3 185 41-243 10-194 (194)
30 MTH00050 ATP6 ATP synthase F0 100.0 1.5E-38 3.8E-43 217.1 11.2 145 83-238 22-166 (171)
31 KOG4664 consensus 89.6 0.77 2E-05 22.7 4.9 98 141-244 119-223 (261)
32 TIGR00926 2A1704 Oligopeptide 54.3 14 0.00036 16.2 3.4 82 80-175 144-236 (781)
33 TIGR00934 2a38euk potassium up 35.2 30 0.00076 14.6 4.5 76 110-185 864-951 (1197)
34 pfam11840 DUF3360 Protein of u 30.9 36 0.00091 14.2 5.6 91 82-176 97-201 (491)
35 KOG2877 consensus 30.5 36 0.00092 14.1 4.1 101 3-103 28-143 (389)
36 KOG1289 consensus 25.2 45 0.0012 13.6 2.3 31 120-150 356-391 (550)
37 pfam01441 Lipoprotein_6 Lipopr 23.8 45 0.0011 13.7 1.5 18 83-100 5-22 (209)
38 KOG0759 consensus 23.6 49 0.0012 13.5 3.6 17 168-184 216-232 (286)
39 KOG3491 consensus 23.0 43 0.0011 13.8 1.3 29 71-99 22-52 (65)
40 PTZ00307 ethanolamine phosphot 21.0 56 0.0014 13.2 3.7 81 3-83 38-120 (417)
No 1
>MTH00175 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=449.64 Aligned_cols=242 Identities=37% Similarity=0.693 Sum_probs=219.0
Q ss_pred CCCCCHHHHCCCCEEEEEECC--EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 987644673124500014248--346410899999999999999999831465537886403567788756787752057
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQG--FDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAG 78 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~--~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g 78 (250)
|.+||+|||+++++++++..+ +++++||.++.++++..+. +...|+.|.+|+|+|++.|+++|++||+++|++|
T Consensus 1 m~~spleQF~i~~l~~~~~~~~~~~~t~tn~~l~~~l~~~~~----~l~~~~~~lvP~r~Q~~~E~i~~fv~~~v~~~iG 76 (244)
T MTH00175 1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVMMF----WLLLKGDKLIPNRWQSVMELIHLNIRSVVHDNLG 76 (244)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999821027886136767444431011589999999999999----9983689825749899999999999999998708
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 66753025899999985123232301245443103554214679999999999984158642111389999875430233
Q gi|254781088|r 79 NQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVC 158 (250)
Q Consensus 79 ~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~ 158 (250)
++++||.|++.|+|+||+++|++|++||.++||||+++|+++|+.+|+.+.+.|+|++|.++++++.|+|.|+++.|+++
T Consensus 77 ~~g~k~~P~i~tlF~fIl~~Nl~GliP~~~~pTs~~~vt~~Lal~~~~~~~~~g~~~~g~~~~~~f~P~G~P~~l~pll~ 156 (244)
T MTH00175 77 KSGEKYFPFVLSLFLFIAMLNILGLFPYVFTPTAHIVVTFGLSLSILIAVTLLGFLTFKWNFLSIFMPGGAPLVLAPFLV 156 (244)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 67664599999999999999998701658676410675599999999999999999906554223579996199999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35677654413333357778777689999999999999998788999999999999999999999999999999999999
Q gi|254781088|r 159 FIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLAC 238 (250)
Q Consensus 159 ~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~ 238 (250)
++|++|+++||+|||+||||||+|||+++++++++.+.....+. ...+..+....+.+.++|++|+++|||||++||+
T Consensus 157 ~IE~is~l~RPisL~lRLfaNm~AGhlll~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lEl~Va~iQAYVF~lLt~ 234 (244)
T MTH00175 157 IIETLSYLIRAISLGVRLAANITAGHLLFAIISGFTFNMLSNGL--LFLSLFPMLIMIFITLLEMAVAVIQAYVFCLLTT 234 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998702799999999999869999999999999998889--9999999999999999999999999999999999
Q ss_pred HHHHHHCCCC
Q ss_conf 9973340103
Q gi|254781088|r 239 VYIGDVYRSD 248 (250)
Q Consensus 239 ~Yi~~a~~~~ 248 (250)
+|++||+|.|
T Consensus 235 ~Yi~~av~~H 244 (244)
T MTH00175 235 IYLGDTIALH 244 (244)
T ss_pred HHHHHHHHCC
T ss_conf 9998777439
No 2
>MTH00174 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=443.74 Aligned_cols=245 Identities=32% Similarity=0.559 Sum_probs=219.7
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEEC-------CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 98764467312450001424834641-------08999999999999999998314655378864035677887567877
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSF-------TNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTL 73 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~i-------t~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v 73 (250)
|.+||+|||++.++++++.++.|+++ ||..+.+.....+... .....++.+.+|||||++.|+++|+++|++
T Consensus 1 M~~s~ldQF~I~~l~~i~~~~~~~~~~~~~~~~tn~~~~~~~~~~~~~~-~~~~~~~~~lvP~r~Q~~~E~~y~~v~~~v 79 (252)
T MTH00174 1 MVAAYFDQFNIIPIFSIWVYFLSFWINGEFFCFTNTFFMMSFAVFLFYT-IGAKGNNNTLVPNRILVGLELIYSHFYTVL 79 (252)
T ss_pred CCCCCHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCEECCCHHHHHHHHHHHHHHHHH
T ss_conf 9999431236423012133555410130478799999999999999999-997067983466489999999999999999
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 52057667530258999999851232323012454431035542146799999999999841586421113899998754
Q gi|254781088|r 74 CDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLI 153 (250)
Q Consensus 74 ~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l 153 (250)
+|++|+|++||.|++.|+|+||+++|++|++||.++||+|+++|+++|+.+|+++.+.|++++|.++++++.|+|+|+++
T Consensus 80 ~~~iG~~g~~y~Pfi~tlF~fIl~~NllGliP~~ft~Tshl~vT~~Lal~v~~~~~i~G~~~~g~~f~~~f~P~G~P~~L 159 (252)
T MTH00174 80 KDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLAL 159 (252)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHH
T ss_conf 98707578642999999999999999987018676874138899999999999999999997151241530789873999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30233356776544133333577787776899999999999999987889999999999999999999999999999999
Q gi|254781088|r 154 KPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIF 233 (250)
Q Consensus 154 ~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF 233 (250)
.|+++++|++|+++||+|||+||||||+|||+++++++++.+.+...+.. ..+..|+...+.++++|++|+++|||||
T Consensus 160 ~Pllv~IE~iS~l~RpiSL~vRLfANm~AGH~ll~il~~f~~~~~~~~~~--~~~~~p~~~~~~~~~LEl~Va~iQAYVF 237 (252)
T MTH00174 160 APLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGIL--IGSFVPFAILIFVTILEMAVAIIQAYVF 237 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999987337899999999998699999999999999988899--9999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 999999973340103
Q gi|254781088|r 234 MVLACVYIGDVYRSD 248 (250)
Q Consensus 234 ~~Lt~~Yi~~a~~~~ 248 (250)
++||++|++||+|.|
T Consensus 238 tlLt~iYi~dai~lH 252 (252)
T MTH00174 238 TLLTIVYLRDTVELH 252 (252)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999988666339
No 3
>PRK13416 consensus
Probab=100.00 E-value=0 Score=436.74 Aligned_cols=246 Identities=29% Similarity=0.514 Sum_probs=225.9
Q ss_pred CCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHCCC-C
Q ss_conf 76446731245000142483464108999999999999999998314655378864035677887567877-520576-6
Q gi|254781088|r 3 KSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTL-CDSAGN-Q 80 (250)
Q Consensus 3 ~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v-~~~~g~-~ 80 (250)
.+|.|||..+++++++.+|.|+++||.++.++++.+++..+.+.+.||.+.+|||+|++.|+++|++||++ ++++|+ +
T Consensus 16 ~p~le~F~~~~~~~~~~~~~~~s~tn~~l~~~l~~~~i~~f~~~~~r~~~lVP~~~Q~~~E~~~~Fv~~~i~~~~iG~k~ 95 (268)
T PRK13416 16 PPGLDVFLPPAWFEWGGGDVNFYFNKPMLLVLLSVVFVAGFFWLAFRKPKLVPGGLQNAGESAYDFVRNQIAKEVIGKKD 95 (268)
T ss_pred CCCHHHCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHC
T ss_conf 95987668853054146875455209999999999999999999963898278511889999999999987551136021
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCC-CCCCCCCCCCCCHH
Q ss_conf 753025899999985123232301245-4431035542146799999999999841586-42111-38999987543023
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYL-FSFTSQIVVTTSFSLLVVLSVVISGFYVNGL-GFLRL-FIPKDIPLLIKPLV 157 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~-~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~-~~~~~-~~~~g~p~~l~p~~ 157 (250)
+|||.|++.|+|+||+++|++|++|+. +|+|||+++|++||+.+|+.+++.|+|+||. +|+|+ +.|+|.|+++.|++
T Consensus 96 g~k~~P~i~TlF~fIl~~Nl~GliP~~~~p~Ts~i~~t~~LAl~v~~~~~~~Gik~~G~~~y~k~~~~P~g~p~~l~pll 175 (268)
T PRK13416 96 GRKYVPLLFSLFFFVLVNNIWGIIPVAQFPSTSRIAGPYVLAAVVYVTWIYLGIKKNGFGKYFKLMTVPPGVPLYILPLL 175 (268)
T ss_pred CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 54515999999999999998736310548864006788999999999999999999650888899808999841488889
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3356776-544133333577787776899999999999999987889999999999999999999999999999999999
Q gi|254781088|r 158 CFIEVSS-FLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVL 236 (250)
Q Consensus 158 ~~iE~is-~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~L 236 (250)
+++|++| +++||+||++||||||+|||+++.++++..+.+.... +...+..+++..+.++.||++|+++|||||++|
T Consensus 176 ~pIE~is~~l~RPiSL~lRLfaNm~AGhill~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~fEl~Va~iQAYVFtlL 253 (268)
T PRK13416 176 IPIEFISNFLVRPFTHAVRLFANMFAGHLLLLLFGSGAWYLLPQE--NFVFKGASLLVAVAMTMFELLIMALQAYVFTLL 253 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999862489999999999864999999999999998757--899999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCC
Q ss_conf 99997334010349
Q gi|254781088|r 237 ACVYIGDVYRSDQH 250 (250)
Q Consensus 237 t~~Yi~~a~~~~~h 250 (250)
|++|+++|++|+||
T Consensus 254 t~vYi~~Ai~h~e~ 267 (268)
T PRK13416 254 TAAYIGGAMLHADS 267 (268)
T ss_pred HHHHHHHHHHCCCC
T ss_conf 99999877603236
No 4
>PRK13419 F0F1 ATP synthase subunit A; Provisional
Probab=100.00 E-value=0 Score=428.59 Aligned_cols=241 Identities=27% Similarity=0.456 Sum_probs=210.7
Q ss_pred CCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC-----CCCCCCHHHHHHHHHHHHHH-HHH
Q ss_conf 876446731245000142483464108999999999999999998314655-----37886403567788756787-752
Q gi|254781088|r 2 SKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCR-----VVPTRLQSFFEIIYQFIMST-LCD 75 (250)
Q Consensus 2 ~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~-----~vP~~~q~~~E~i~~~i~~~-v~~ 75 (250)
+..|+.+.+.++ ++++|.|+|+||++.++|++.++++++...+.|+.| .+|+|.||++|.+++|+||+ +++
T Consensus 78 ~~~~f~~~~~~~---~~~~~~D~sITK~V~~mwi~a~~l~~~f~~~~r~ykk~~~~~~P~G~~n~~E~lV~FVRddIa~~ 154 (335)
T PRK13419 78 EFEPFGEVHLPK---LVVGGFDISITKHVVMMWIASAILLVVFLAAGRKYKKMTKSQAPKGLANAMEALVEFIRLDVAKS 154 (335)
T ss_pred ECCCCCCCCCCC---CEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 048987432764---01347540047869999999999999999999998614845598388888999999998645784
Q ss_pred HCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCC
Q ss_conf 0576675302589999998512323230124544310355421467999999999998415864-211138999987543
Q gi|254781088|r 76 SAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLG-FLRLFIPKDIPLLIK 154 (250)
Q Consensus 76 ~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~-~~~~~~~~g~p~~l~ 154 (250)
++|++++||.||+.|+|+||+++|++|++||..++|+|+++|++||+.+|+.+++.|+|++|.+ |++++ |+|+|+++.
T Consensus 155 nIG~~~~ky~PfL~TlFfFIL~~NLlGLIP~~~t~T~nI~vT~~LAlitfi~~~~~Gik~~G~~~y~k~i-~~GvP~~L~ 233 (335)
T PRK13419 155 NIGHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHL-TGGTHWSLW 233 (335)
T ss_pred CCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC-CCCCCHHHH
T ss_conf 0486663531799999999999999773587878731488999999999999999999996768886655-899856799
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02333567765441333335777877768999999999999999878899999999999999999999999999999999
Q gi|254781088|r 155 PLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFM 234 (250)
Q Consensus 155 p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~ 234 (250)
|+++|+|++|+++||+||++||||||+|||+++..+.++.+.+... ......++...++++.+|++|+++|||||+
T Consensus 234 pllvPIEiis~f~RP~SLaIRLFANM~AGHivll~l~~l~fi~~~~----~v~~~vsv~~~l~i~lLEllVafLQAYIFT 309 (335)
T PRK13419 234 IIMIPIEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSY----IVAVAVSVPFAIFIYLLEIFVAFLQAYIFT 309 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999876099999999999999878----999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCC
Q ss_conf 9999997334010349
Q gi|254781088|r 235 VLACVYIGDVYRSDQH 250 (250)
Q Consensus 235 ~Lt~~Yi~~a~~~~~h 250 (250)
+||++|+++|.++|||
T Consensus 310 lLTavYIG~A~~~~~h 325 (335)
T PRK13419 310 MLSALFIGLATAHEGH 325 (335)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999867641234
No 5
>MTH00172 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=406.17 Aligned_cols=232 Identities=36% Similarity=0.659 Sum_probs=211.2
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
|+.|.+|||....+. ++||+.+.+.++. ......+||.|.+|||+|+++|+++|+++|+++|++|+|
T Consensus 1 m~~~~f~~f~~~~~l---------~it~s~l~m~l~~----~~~~~~~r~~~~vP~r~Q~~~E~i~~~v~~~v~~~ig~~ 67 (232)
T MTH00172 1 MSSSYFDQFNVVWLI---------GLTNSSIMMILVV----IVVLLLFKGIQLIPKRWQSIIELIYDHFHGVVKDNLGNE 67 (232)
T ss_pred CCHHHCCCCCCCHHH---------HHHHHHHHHHHHH----HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 957651677771747---------2028999999999----999998589882460999999999999999999763888
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
++||.|++.|+|+||+++|++|++||.++||+|+++|+++|+.+|+++.+.|++++|.++++++.|+|.|+++.|+++++
T Consensus 68 ~~k~~P~i~tlF~fIl~~Nl~GliP~~~~~Ts~~~~t~~lal~~~~~~~~~G~~~~~~~~~~~~~P~G~p~~l~Pll~~i 147 (232)
T MTH00172 68 GLKYFPFIISLFFFIVFLNVLGLFPYVFTPTVHIVVTLGLSFSIIIGVTLAGLWRFKWDFFSILMPSGAPLGLAPLLVLI 147 (232)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 86329999999999999999874766408412199899999999999999999965501000347899609999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
|++|+++||+||++||||||+|||++++++++..+.....+ ...+..+....+.+.++|++|+++|||||++|+++|
T Consensus 148 E~is~~~RpiSL~lRLfaNm~AGhlll~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lEl~V~~iQAYVF~lLt~vY 224 (232)
T MTH00172 148 ETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLVAG---GLVGLFPLLIMVFITLLEVAVAVIQAYVFCLLTTIY 224 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987879999999999887999999999999999988---999999999999999999999999999999999999
Q ss_pred HHHHCCCC
Q ss_conf 73340103
Q gi|254781088|r 241 IGDVYRSD 248 (250)
Q Consensus 241 i~~a~~~~ 248 (250)
++||+|.|
T Consensus 225 i~~av~~H 232 (232)
T MTH00172 225 LADTIVLH 232 (232)
T ss_pred HHHHHHCC
T ss_conf 98666339
No 6
>PRK13421 F0F1 ATP synthase subunit A; Provisional
Probab=100.00 E-value=0 Score=405.02 Aligned_cols=220 Identities=26% Similarity=0.421 Sum_probs=199.4
Q ss_pred CCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 87644673124500014248346410899999999999999999831465537886403567788756787752057667
Q gi|254781088|r 2 SKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQS 81 (250)
Q Consensus 2 ~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~ 81 (250)
++||+++...- +++++ ++|++++++|++++++.++.+.++||.|.+|+|+|++.|+++|+++|+++|++|+++
T Consensus 1 ~~~pl~~~p~f-----~iG~~--~it~tvl~~wiv~~~l~~~~~~~~r~~klvP~~~Q~~~E~~~~fv~~~v~~~~g~~~ 73 (231)
T PRK13421 1 NASPLSTVPLF-----HLGPV--PISAPVLATWAIMAVLVAGALVATRRLSLAPSRLQSVLELFVATIDAQIRDTMQTPP 73 (231)
T ss_pred CCCCCCCCCEE-----EEECE--EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC
T ss_conf 98987677715-----77085--443999999999999999999995888538998815403799988889998627467
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 530258999999851232323012454431035542146799999999999841586-4211138999987543023335
Q gi|254781088|r 82 KNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGL-GFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 82 ~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~-~~~~~~~~~g~p~~l~p~~~~i 160 (250)
+||.|++.|+|+||+++|++|++||..+||||+++|+++|+.+|+.+++.|+|++|. +|++++.++ .|++.|+
T Consensus 74 ~~~~P~i~TlF~fIl~~Nl~GliPg~~~pTa~l~~t~~LAl~v~~~~~~~gik~~G~~~y~k~~~~P------~~i~~pi 147 (231)
T PRK13421 74 ARYRALIGTLFVFVLCANWSSLVPGVEPPTAHLETDAALALIVLLATIYYGVRARGVRGYLATFAEP------TWVMIPL 147 (231)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC------HHHHHHH
T ss_conf 5338999999999999999865488868753710339999999999999999980840630201375------0688799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
|++|+++||+|||+||||||+|||+++.++.++ .+...++++++||++++++|||||++||++|
T Consensus 148 ~ii~~l~rpvSLslRLFgNi~aG~~il~~~~~l----------------~~~~~pi~~~~lel~v~~iQAyVFt~Lt~vY 211 (231)
T PRK13421 148 NVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSL----------------AGLLVPIPLMALDLLTGAVQAYIFAVLAMVF 211 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999843138899999999869999999999----------------9999999999999999999999999999999
Q ss_pred HHHHCCCCCC
Q ss_conf 7334010349
Q gi|254781088|r 241 IGDVYRSDQH 250 (250)
Q Consensus 241 i~~a~~~~~h 250 (250)
+++|+|||||
T Consensus 212 I~~Ai~~~~~ 221 (231)
T PRK13421 212 IGAAVSDDET 221 (231)
T ss_pred HHHHHCCCCC
T ss_conf 9857452256
No 7
>COG0356 AtpB F0F1-type ATP synthase, subunit a [Energy production and conversion]
Probab=100.00 E-value=0 Score=399.87 Aligned_cols=238 Identities=39% Similarity=0.705 Sum_probs=223.5
Q ss_pred CCCCHHHHCCCCEEEEEECC--EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 87644673124500014248--3464108999999999999999998314655378864035677887567877520576
Q gi|254781088|r 2 SKSPMSQFIVQKIVPIQVQG--FDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGN 79 (250)
Q Consensus 2 ~~sP~~~f~~~~l~~~~i~~--~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~ 79 (250)
.++|.+|+...+..+....| ++.+.|+.++..+.+.+++..+...++|+.+++|+|+|++.|+++|++||+++|++|+
T Consensus 4 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~vP~~~Q~~~E~i~~fv~~~~~~~ig~ 83 (246)
T COG0356 4 TESPTAQFYIGHHLPFLILGDFWDLNITSLSLFVLLGVVFLFLFSLLAKRNTKLVPGGFQNFLEMIVEFVRGMVKDNIGG 83 (246)
T ss_pred CCCCCHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 45752377742440466415621577899999999999999999999851346698068999999999999999985276
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCHH--HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCH
Q ss_conf 67530258999999851232323012--4544310355421467999999999998415864-21113899998754302
Q gi|254781088|r 80 QSKNFFPFVFSLFVFLTTANLLGLHP--YLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLG-FLRLFIPKDIPLLIKPL 156 (250)
Q Consensus 80 ~~~~~~p~i~TlF~fIl~~NllGLiP--~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~-~~~~~~~~g~p~~l~p~ 156 (250)
+++|+.|++.|+|+||+++|++|+.| +..+||||+++|++||+.+++.++++|+|+||.+ |+|++.+++.+ +.|+
T Consensus 84 ~~~~~~pl~~TLF~fIfi~Nll~l~~~~~~~~pTadi~~tl~LAl~V~~~~~~~gik~~G~~~~~k~~~~~~~~--~~pl 161 (246)
T COG0356 84 KGKKFAPLALTLFLFIFIANLLGLDPLGLFESPTADINVTLALALLVFLLIHFYGIKKKGLGGFFKEFAFPPFP--LAPL 161 (246)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCHH
T ss_conf 45401899999999999997245775345017875634899999999999999999984379999998058877--6204
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33356776544133333577787776899999999999999987889999999999999999999999999999999999
Q gi|254781088|r 157 VCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVL 236 (250)
Q Consensus 157 ~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~L 236 (250)
+.++|++|+++||+|||+||||||+|||+++.+++++..+.... .+ ++...++.|.+||++++++|||||++|
T Consensus 162 ~~~~eiis~~a~piSLslRLFGNi~AG~iil~lia~~~~~~~~~------~~-~~~~~~~~~~~f~ifv~~lQAyVF~~L 234 (246)
T COG0356 162 MLPLEIVSELAKPISLSLRLFGNILAGEILLALIAGLVPYFMPQ------LG-LPIILNVAWTAFDIFVGTLQAYVFMML 234 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02999999877678899999986646599999999999999887------31-078899999999999999999999999
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999973340103
Q gi|254781088|r 237 ACVYIGDVYRSD 248 (250)
Q Consensus 237 t~~Yi~~a~~~~ 248 (250)
|++|+++++++|
T Consensus 235 T~vYl~~a~~~~ 246 (246)
T COG0356 235 TIVYLSDAIEEE 246 (246)
T ss_pred HHHHHHHHHCCC
T ss_conf 999998774179
No 8
>PRK13420 F0F1 ATP synthase subunit A; Provisional
Probab=100.00 E-value=0 Score=397.84 Aligned_cols=217 Identities=27% Similarity=0.452 Sum_probs=198.0
Q ss_pred HHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 673124500014248346410899999999999999999831465537-8864035677887567877520576675302
Q gi|254781088|r 7 SQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVV-PTRLQSFFEIIYQFIMSTLCDSAGNQSKNFF 85 (250)
Q Consensus 7 ~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~v-P~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~ 85 (250)
|||..+.++++ ++ +++|++++.+|++++++.++.+..+||.+.+ |||+|+++|++++++||+++|++|++++||.
T Consensus 4 e~f~~~~lf~i--g~--~~it~tvl~~~iv~~il~~~~~~~~r~~~~v~P~~~Q~~~E~iv~fi~~~v~~~~g~~~~~~~ 79 (230)
T PRK13420 4 EGFLAHVLFHI--GP--LPITESVLTTWLIMIVLVLASWVLTRRLSLLQPSRFQVILEGVLSTIEDAVKEVIPRHARLVF 79 (230)
T ss_pred CCCCCCCEEEE--CC--EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEH
T ss_conf 44877726876--79--855399999999999999999999827887899833121399999999999986161242003
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 58999999851232323012454431035542146799999999999841586-42111389999875430233356776
Q gi|254781088|r 86 PFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGL-GFLRLFIPKDIPLLIKPLVCFIEVSS 164 (250)
Q Consensus 86 p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~-~~~~~~~~~g~p~~l~p~~~~iE~is 164 (250)
|++.|+|+||+++|++|++|+.++||||+|+|+++|+.+|+.+++.|+|++|. +|+|++.++ .|++.|+|++|
T Consensus 80 P~i~TlF~FIl~~NllGliPg~~~pTa~i~~t~~LAl~~fi~~~~~Gik~~G~~~ylk~~~~p------~p~l~pieiis 153 (230)
T PRK13420 80 PFIATLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLRAYLKHYLSP------SPFLLPFHLIS 153 (230)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC------HHHHHHHHHHH
T ss_conf 899999999999988436688879986800489999999999999887520747776775476------49999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54413333357778777689999999999999998788999999999999999999999999999999999999997334
Q gi|254781088|r 165 FLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGDV 244 (250)
Q Consensus 165 ~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a 244 (250)
+++||+|||+||||||+|||+++.++..+ .+...++++..||++++++|||||++||++|+++|
T Consensus 154 ~~~rpiSLslRLFgNi~ag~ii~~~~~~l----------------~~~l~pv~~~~lel~v~~IQAyVFt~Lt~vYI~~A 217 (230)
T PRK13420 154 EITRTLALAVRLFGNMMSLELAALLVLLI----------------AGFLVPVPILLLHIIEAIVQAYIFGMLALIYIAGG 217 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99989999999999999989999999999----------------99999999999999999999999999999999878
Q ss_pred CCCCC
Q ss_conf 01034
Q gi|254781088|r 245 YRSDQ 249 (250)
Q Consensus 245 ~~~~~ 249 (250)
+|+||
T Consensus 218 ie~he 222 (230)
T PRK13420 218 IQALE 222 (230)
T ss_pred HHHHH
T ss_conf 77788
No 9
>CHL00046 atpI ATP synthase CF0 A subunit
Probab=100.00 E-value=0 Score=395.13 Aligned_cols=221 Identities=29% Similarity=0.501 Sum_probs=201.8
Q ss_pred HHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCC
Q ss_conf 467312450001424834641089999999999999999983146553788640356778875678775205766-7530
Q gi|254781088|r 6 MSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ-SKNF 84 (250)
Q Consensus 6 ~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~-~~~~ 84 (250)
++|-+..+-..++++|++++ +++.++.|+++++++++.+.++||.|.+|+|+||++|+++|++||.++|++|+| +++|
T Consensus 8 ~~~~~~g~~~~f~iGg~~~~-~~tli~~wivmaili~~~~~~tR~~~~vP~~~Qn~~E~~v~fi~~~v~~~~g~k~~~~~ 86 (239)
T CHL00046 8 ISGVEVGQHFYWQIGGFQVH-GQVLITSWVVIAILLGSAILATRNPQTIPTGGQNFFEYVLEFIRDLSKTQIGEEEYGPW 86 (239)
T ss_pred HHHHCCCCEEEEEECCEEEE-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 77733367389999998662-42799999999999999999983773478375999999999999999976181134421
Q ss_pred HHHHHHHHHHHHCCCCCC-CHHH---------HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 258999999851232323-0124---------544310355421467999999999998415864211138999987543
Q gi|254781088|r 85 FPFVFSLFVFLTTANLLG-LHPY---------LFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIK 154 (250)
Q Consensus 85 ~p~i~TlF~fIl~~NllG-LiP~---------~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~ 154 (250)
.|++.|+|+||+++|++| ++|+ ..+||||+|+|+++|+.+++.+++.|+|++|.+|++++..+ .
T Consensus 87 ~P~i~TlFlfIl~~N~~G~liP~~~~~~~~~~~~~PTadln~T~~lAli~~v~~~~~gik~~G~gy~~~~~~P------~ 160 (239)
T CHL00046 87 VPFIGTLFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFGKYIQP------T 160 (239)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------C
T ss_conf 3999999999999998363454332256666657998775799999999999999999999643688888261------0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02333567765441333335777877768999999999999999878899999999999999999999999999999999
Q gi|254781088|r 155 PLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFM 234 (250)
Q Consensus 155 p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~ 234 (250)
|++.|+|++|+++||+|||+||||||+|||+++.++.++ .+...++++.++|++++++|||||+
T Consensus 161 p~~~pi~ii~~~~rpvSLslRLFGNi~aGeill~~~~~l----------------~~~~~p~~~~~~~lfvg~iQAyVF~ 224 (239)
T CHL00046 161 PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSL----------------VPLVVPIPVMFLGLFTSGIQALIFA 224 (239)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 588789999998712068889888777638999999999----------------9999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCC
Q ss_conf 999999733401034
Q gi|254781088|r 235 VLACVYIGDVYRSDQ 249 (250)
Q Consensus 235 ~Lt~~Yi~~a~~~~~ 249 (250)
+||++|+++|+|+||
T Consensus 225 ~Lt~vYI~~a~e~hH 239 (239)
T CHL00046 225 TLAAAYIGESMEGHH 239 (239)
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 999999976754339
No 10
>PRK05815 F0F1 ATP synthase subunit A; Validated
Probab=100.00 E-value=0 Score=391.35 Aligned_cols=231 Identities=39% Similarity=0.616 Sum_probs=206.8
Q ss_pred CCCHHHHCCCCEEEEEE-CCEEEECCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 76446731245000142-4834641089999999999999999983146-553788640356778875678775205766
Q gi|254781088|r 3 KSPMSQFIVQKIVPIQV-QGFDLSFTNSSLAMLVSLLVIFIFAFFAVSN-CRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 3 ~sP~~~f~~~~l~~~~i-~~~~~~it~~~l~~~i~~~il~~~~~~~~~~-~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
..+.+++..|++.+.++ ++.++++|+..++++++.+++..+....+|+ .+.+|||+|+++|+++|++||+++|++|+|
T Consensus 2 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~r~~~~~vP~~~Q~~~E~~~~fv~~~v~~~~g~~ 81 (235)
T PRK05815 2 ALTPSEYIQHHLGNFQLFGFWTFNLDTLFLSVLLAVIVLLLFFLAARKLATVGVPGGLQNFVEMIVEFVRGQVKDNIGKK 81 (235)
T ss_pred CCCHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 98867799852562136651402186999999999999999999997157789990999999999999999999864987
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864-21113899998754302333
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLG-FLRLFIPKDIPLLIKPLVCF 159 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~-~~~~~~~~g~p~~l~p~~~~ 159 (250)
++||.|++.|+|+||+++|++|++||.++||||+++|+++|+++|+.+++.|+|+||.+ |+++ |+++.|++.|
T Consensus 82 ~~~~~P~i~tlF~fIl~~Nl~GliP~~~~pTs~l~~t~~Lal~~~~~~~~~gik~~G~~~~~~~------~~~~~P~~~p 155 (235)
T PRK05815 82 GKKFAPLALTLFLFILLMNLLGLIPGFFSPTADINVTLALALLVFVLVIYYGIKKKGLGGFLKE------PWYLAPVMLP 155 (235)
T ss_pred CCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC------CHHHHHHHHH
T ss_conf 6541899999999999998740325787886570128999999999999999999751373487------4122379989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 56776544133333577787776899999999999999987889999999999999999999999999999999999999
Q gi|254781088|r 160 IEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACV 239 (250)
Q Consensus 160 iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~ 239 (250)
+|++|+++||+|||+||||||+|||+++++++++.+.. ...+..+...++++.+||++++++|||||++||++
T Consensus 156 ie~i~~~~rpiSLs~RLFgNi~AGhill~l~~~~~~~~-------~~~~~~~~~~~~~~~~fel~v~~iQAyVF~~Lt~v 228 (235)
T PRK05815 156 IEIISELSRPVSLSLRLFGNMLAGELILILIAGLAGLG-------ILLWLLPLILPVAWTAFEIFVGTLQAYIFMMLTIV 228 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999987121788998988775389999999999899-------99999999999999999999999999999999999
Q ss_pred HHHHHCC
Q ss_conf 9733401
Q gi|254781088|r 240 YIGDVYR 246 (250)
Q Consensus 240 Yi~~a~~ 246 (250)
|+++|+|
T Consensus 229 Yi~~aie 235 (235)
T PRK05815 229 YLSDAVE 235 (235)
T ss_pred HHHHHHC
T ss_conf 9975409
No 11
>PRK13417 F0F1 ATP synthase subunit A; Provisional
Probab=100.00 E-value=0 Score=385.09 Aligned_cols=227 Identities=29% Similarity=0.521 Sum_probs=199.8
Q ss_pred EEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCCHHHHHHH
Q ss_conf 1424834641089999999999999999983146----55378864035677887567877-520576675302589999
Q gi|254781088|r 17 IQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSN----CRVVPTRLQSFFEIIYQFIMSTL-CDSAGNQSKNFFPFVFSL 91 (250)
Q Consensus 17 ~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~----~~~vP~~~q~~~E~i~~~i~~~v-~~~~g~~~~~~~p~i~Tl 91 (250)
...+|+|+|+|+++.++|++.+++++.+..++|+ .+.+|+|+|+++|.+++|+||++ ++++|+|++||.||+.|+
T Consensus 85 ~~~~~lD~SITK~V~~l~i~~~~l~~~f~~~ar~y~k~~~~~PsG~~nfvE~iV~FVRD~IakpnIG~k~~k~~P~LLTi 164 (352)
T PRK13417 85 HYVGGFDMHITKRVTMMWIVAFFLFLIFIPAANIIAKNPLKVQSRFANTVEVFVNFLRKDIVDESMHGHGHSYYHYIFTL 164 (352)
T ss_pred EECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCEEHHHHHH
T ss_conf 42377247763659999999999999999999998748887981777789999888631160402576553010899999
Q ss_pred HHHHHCCCCCCCHHH-----------------------------------HHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 998512323230124-----------------------------------544310355421467999999999998415
Q gi|254781088|r 92 FVFLTTANLLGLHPY-----------------------------------LFSFTSQIVVTTSFSLLVVLSVVISGFYVN 136 (250)
Q Consensus 92 F~fIl~~NllGLiP~-----------------------------------~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~ 136 (250)
|+||+++|++||+|+ ..++|+|+++|++||+.+++.+++.|+|++
T Consensus 165 FFFIl~~NlmGLIP~~~~l~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~g~~vTgni~vT~~LAl~tfii~~~~G~k~~ 244 (352)
T PRK13417 165 FFFILFCNLMGLVPSVGELTVVASDYGGLVALGVMDHTPHALPTFAKVWSGITVTGDISVTMTLALLTMFLIYGAGFSYQ 244 (352)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999987731688853223211112221222211234321110010135886766699999999999999998410211
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8642111389999875430233356-776544133333577787776899999999999999987889999999999999
Q gi|254781088|r 137 GLGFLRLFIPKDIPLLIKPLVCFIE-VSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLAN 215 (250)
Q Consensus 137 g~~~~~~~~~~g~p~~l~p~~~~iE-~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (250)
|.+++.+.+|+|+|+++.|++.|+| +.+.++||+||++||||||+|||+++..+.++...... ......++...
T Consensus 245 G~~~fw~~vP~GvP~~l~pil~pIE~i~~~~~rPfsL~iRLFANM~AGHiill~l~~~if~~~~-----~~~~~~s~~~~ 319 (352)
T PRK13417 245 GPKFIWHSVPNGVPLLLYPIMWPLEFIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQS-----WGIVPVSVIGS 319 (352)
T ss_pred CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH
T ss_conf 6323335589999706999999999999998708999999999987639999999999999988-----99999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 999999999999999999999999973340103
Q gi|254781088|r 216 VAVTGLEFFVAFMQAYIFMVLACVYIGDVYRSD 248 (250)
Q Consensus 216 ~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a~~~~ 248 (250)
..+..+|++|+++|||||++||++|+|+|+|+|
T Consensus 320 ~~i~~lEllVa~LQAYIFtlLsavYIg~A~~~H 352 (352)
T PRK13417 320 GLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999999999973664348
No 12
>pfam00119 ATP-synt_A ATP synthase A chain.
Probab=100.00 E-value=0 Score=380.70 Aligned_cols=215 Identities=39% Similarity=0.674 Sum_probs=196.4
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 41089999999999999999983146553788640356778875678775205766-75302589999998512323230
Q gi|254781088|r 25 SFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ-SKNFFPFVFSLFVFLTTANLLGL 103 (250)
Q Consensus 25 ~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~-~~~~~p~i~TlF~fIl~~NllGL 103 (250)
++|+..+.++....++.......+||.+.+|||+|+++|+++|+++|+++|++|+| ++||.|++.|+|+||+++|++|+
T Consensus 2 ~f~~~~l~~~~~~~~i~~~~~~~~~~~~~vP~~~q~~~E~~~~fv~~~v~~~~g~k~~~~~~p~~~tlF~fIl~~Nl~Gl 81 (217)
T pfam00119 2 NFHLLSLFMLLLLLLILFLVSLATTKNLTVPSRFQSFLELIVDFVLNLIKDQIGGKGGPLFAPLIITLFLFILISNLLGL 81 (217)
T ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 35199999999999999999999746886883999999999999999999883865654469999999999999998744
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12454431035542146799999999999841586421113899998754302333567765441333335777877768
Q gi|254781088|r 104 HPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAG 183 (250)
Q Consensus 104 iP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG 183 (250)
+|+.++||||+++|+++|+++|+.+++.|+|++|.++++++.|+|.|+++.|++.++|++|+++||+|||+||||||+||
T Consensus 82 iP~~~~pTs~l~~t~~lal~~~~~~~~~gi~~~g~~~~~~~~~~~~~~~l~p~~~~ieiis~~~rp~SLslRLfgNi~aG 161 (217)
T pfam00119 82 IPYSFTPTSDISLTLSLALPLWLATLIYGIKNKGFSGFSHLVPPGTPLFLIPFLVPIELISLFARPLSLGLRLFGNILAG 161 (217)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 24573887582379999999999999999999269998645389996031389889999999774589999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999878899999999999999999999999999999999999999733
Q gi|254781088|r 184 HLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGD 243 (250)
Q Consensus 184 ~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~ 243 (250)
|++++++++..+.... +...+..+...+++++++|++++++|||||++||++|++|
T Consensus 162 hill~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~el~v~~iQAyVF~~Lt~~Yi~~ 217 (217)
T pfam00119 162 HLLLTLLAGLLWVLLF----GLVGGILPLLIVLLLTILELFVAAIQAYVFTILTSLYLSE 217 (217)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999----9999999999999999999999999999999999999197
No 13
>TIGR03306 altF1_A alternate F1F0 ATPase, F0 subunit A. and in principle may run in either direction. This model represents the F0 subunit A of this apparent second ATP synthase.
Probab=100.00 E-value=0 Score=370.89 Aligned_cols=210 Identities=26% Similarity=0.456 Sum_probs=191.1
Q ss_pred CEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 5000142483464108999999999999999998314655--37886403567788756787752057667530258999
Q gi|254781088|r 13 KIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCR--VVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFS 90 (250)
Q Consensus 13 ~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~--~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~T 90 (250)
..+.++++++ ++|++++.+|++++++.++.+..+||.+ .+|+|+|+++|+++|++||+++|..+++++||.|++.|
T Consensus 5 ~~~~~~~G~~--~It~tvi~~wiv~~~l~~~~~~~~r~~~~~~~P~~~Q~~~E~~~~~v~~~v~~~~~~~~~~~~P~i~T 82 (217)
T TIGR03306 5 ELIYWQYGFV--KINATIAFTWLLMLLLVIGSWLITRRLSTGLERSRWQNLLEVLVTGIQEQISDVGLAKPRKYLPFLGT 82 (217)
T ss_pred EEEEEECCCE--EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
T ss_conf 0799961695--55699999999999999999999813777899980078889999999999998557347550999999
Q ss_pred HHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999851232323012454431035542146799999999999841586-4211138999987543023335677654413
Q gi|254781088|r 91 LFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGL-GFLRLFIPKDIPLLIKPLVCFIEVSSFLFRP 169 (250)
Q Consensus 91 lF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~-~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp 169 (250)
+|+||+++|++|++|+.++||+|+|+|+++|+.+|+.+++.|+|+||. +|++++.++ .|++.|+|++|+++||
T Consensus 83 lF~fIl~~Nl~gliPg~~~pTadln~t~aLAl~~~v~~~~~gik~~G~~~yl~~~~~p------~p~l~Pi~ii~~~~rp 156 (217)
T TIGR03306 83 LFLFIAVANLLSVIPGYEPPTGSLSTTAALALCVFVAVPLFGIAERGLSGYLKSYLKP------TPFMLPFNIIGELSRT 156 (217)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC------HHHHHHHHHHHHHHHH
T ss_conf 9999999999981678758875644799999999999999999991717777760574------3899999999998802
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 33335777877768999999999999999878899999999999999999999999999999999999999733401
Q gi|254781088|r 170 VSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGDVYR 246 (250)
Q Consensus 170 ~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a~~ 246 (250)
+|||+||||||+|||+++.++..+ .+...++++.+||++++++|||||++||++|+++|..
T Consensus 157 vSLs~RLFgNm~aG~iil~~l~~~----------------~~~~~p~~~~~~elfv~~iQAyVF~~Lt~vYi~~At~ 217 (217)
T TIGR03306 157 LALAVRLFGNMMSGSMILAILLSI----------------SPLIFPVLMQVLGLLTGMVQAYIFSVLATVYIAAATR 217 (217)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 117889999888538999999999----------------9999999999999999999999999999999987529
No 14
>MTH00101 ATP6 ATP synthase F0 subunit 6; Validated
Probab=100.00 E-value=0 Score=363.49 Aligned_cols=225 Identities=27% Similarity=0.505 Sum_probs=195.9
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
|+-+-++||.-+.+. ..-..++++...+....++.|++|||+|+..|+.+++++++++++.|+|
T Consensus 1 Mm~nlFs~Fdp~s~~----------------~~~l~~~~~~~~~~~~~~~~~~vp~r~~~~~e~~~~~~~~~i~~~~~~~ 64 (226)
T MTH00101 1 MNENLFASFITPTMM----------------GLPIVILIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMSIHNPK 64 (226)
T ss_pred CCCCHHHHCCCCHHH----------------HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 962032226684888----------------7999999999999999644531476999999999999999998754757
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
+++|.|++.|+|+||+++|++|++||.++||+|+++|+++|+++|+++++.|+|+++.++++|++|+|+|+++.|+++++
T Consensus 65 g~~~~~~l~tlF~fIl~~Nl~Gl~P~~ft~Ts~l~~tl~LAl~~w~~~~~~g~~~~~~~~~~h~~P~G~P~~L~p~mv~I 144 (226)
T MTH00101 65 GQTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVII 144 (226)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 54279999999999999998584078889447799999999999999999999983187888856876623899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
|++|+++||+|||+||+|||+|||+++.++++..+.+... +...+..+......+..+|++|+++|||||++|+++|
T Consensus 145 E~iS~~iRPltLsvRL~ANm~AGHlll~li~~~~~~l~~~---~~~~~~~~~~~~~~l~~lE~~Va~IQAYVFtlL~~lY 221 (226)
T MTH00101 145 ETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSI---STTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999863159998999999987399999999999999988---9999999999999999999999999999999999999
Q ss_pred HHHH
Q ss_conf 7334
Q gi|254781088|r 241 IGDV 244 (250)
Q Consensus 241 i~~a 244 (250)
++|+
T Consensus 222 i~e~ 225 (226)
T MTH00101 222 LHDN 225 (226)
T ss_pred HCCC
T ss_conf 4445
No 15
>MTH00120 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=362.14 Aligned_cols=226 Identities=26% Similarity=0.454 Sum_probs=194.7
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
|+-|-+|||..+.. ..++.+. ..+++.+.....++.+++|+|+|++.|+.++++++++++++|++
T Consensus 1 Mm~nlFs~Fd~~~~--------------~~~~l~~-~~~~i~~~~~~~~~~~~ip~r~~~~~e~~~~~i~~~i~~~~~~~ 65 (227)
T MTH00120 1 MNLNFFDQFSSPEL--------------LGIPLIL-LALLIPTLLLPTPNNRWLTNRLSTLQSWLIKLITKQLMLPLNKT 65 (227)
T ss_pred CCHHHCCCCCCCHH--------------HHHHHHH-HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 95411266799476--------------4899999-99999999998364200581999999999999999999770736
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
++||.|++.|+|++|+++|++|++||.++||+|+++|+++|+++|+++++.|+|++|.++++|++|+|+|+++.|+++++
T Consensus 66 ~~~~~p~l~tlF~fIl~~Nl~GliP~~ft~Ts~l~~t~~LAl~~w~~~~~~g~~~~~~~~~~~~~P~G~P~~L~p~mv~I 145 (227)
T MTH00120 66 GHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALALPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILI 145 (227)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 54359999999999999999771066888504599999999999999999999992557768746887733899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
|++|+++||+||++||+|||.|||++++++++....+... ....+..+......++.+|++|+++|||||++|+++|
T Consensus 146 E~iS~liRPltLsvRL~aNm~AGHlll~l~~~~~~~~~~~---~~~~~~~~~~~~~~l~~lE~~Va~IQAYVFt~L~~lY 222 (227)
T MTH00120 146 ETISLLIRPLALGVRLTANLTAGHLLIQLISTATLALLPT---MPTLSILTMIILLLLTILELAVAMIQAYVFVLLLSLY 222 (227)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988589999999999998499999999999999999---9999999999999999999999999999999999999
Q ss_pred HHHH
Q ss_conf 7334
Q gi|254781088|r 241 IGDV 244 (250)
Q Consensus 241 i~~a 244 (250)
++|.
T Consensus 223 i~E~ 226 (227)
T MTH00120 223 LQEN 226 (227)
T ss_pred HCCC
T ss_conf 4354
No 16
>MTH00035 ATP6 ATP synthase F0 subunit 6; Validated
Probab=100.00 E-value=0 Score=357.48 Aligned_cols=205 Identities=28% Similarity=0.441 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 99999999983146553788640356778875678775205766753025899999985123232301245443103554
Q gi|254781088|r 37 LLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVV 116 (250)
Q Consensus 37 ~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~ 116 (250)
...+.+.+....++.+++|||+|...|++.++++++++++.|++++||.|++.|+|+||+++|++|++||.+++|||+++
T Consensus 25 ~~~~~l~~l~~~~~~~~~p~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tlF~fIl~~Nl~GLiPy~ft~Tshl~~ 104 (229)
T MTH00035 25 SLFIALSWLFFLYSTNWLPSRSQSIWLSFRQSLLKLIFQNTSPNTAPWAGLLTSVFILILSINVLGLLPYAFTSTSHISL 104 (229)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 99999999986654202136999999999999999999764878876699999999999999997745878895367998
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21467999999999998415864211138999987543023335677654413333357778777689999999999999
Q gi|254781088|r 117 TTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTS 196 (250)
Q Consensus 117 t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~ 196 (250)
|+++|+++|+++.+.|+|+++.++++|++|+|+|.++.|+++++|++|+++||+||++||+|||.|||+++.++++..+.
T Consensus 105 t~~LAl~~w~~~~~~g~~~~~~~~~~hl~P~G~P~~L~p~mv~IE~iS~~iRPltL~vRL~aNm~AGHlll~ll~~~~~~ 184 (229)
T MTH00035 105 TYSLGFPLWMSVNILGFYLAFNSRLSHLVPQGTPSYLIPLMVWIETLSLFAQPLALGLRLAANLTAGHLLIFLLSTAIWE 184 (229)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999983798800258888734898899999999870215999899999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9987889999999999999999999999999999999999999973340
Q gi|254781088|r 197 MMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGDVY 245 (250)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a~ 245 (250)
.... ...+..+....+.+..+|++|++||||||++|++.|++|++
T Consensus 185 ~~~~----~~~~~~~~~~~~~l~~lE~~Va~IQAYVFtlL~~lYi~e~i 229 (229)
T MTH00035 185 LSNS----LIIAIITLIIFFLLFILEIGVACIQAYVFTALIHFYLQQNI 229 (229)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9988----99999999999999999999999999999999999975219
No 17
>MTH00073 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=356.07 Aligned_cols=227 Identities=27% Similarity=0.476 Sum_probs=195.4
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
|+-|-+|||..+.+..+ .+ .|+.. .........++.+++|+|+|...|+..+...++.+++.|+|
T Consensus 1 Mm~nlFs~F~~~~~~~~------------~l-~~~~~--~~~~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~ 65 (227)
T MTH00073 1 MNLSFFDQFLSPTLLGI------------PL-IMLAM--LLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTK 65 (227)
T ss_pred CCCCHHCCCCCCHHHHH------------HH-HHHHH--HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 95322065679488899------------99-99999--99999998423433175999999999999999998662767
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
++||.|++.|+|+||+.+|++|++||.+++|||+++|+++|++.|+++.+.|+|+++.++++|++|+|+|+++.|+++++
T Consensus 66 g~~~~~~l~slF~fIl~~Nl~Gl~Py~ft~Tshl~~t~~LAl~~w~~~~~~G~~~~~~~~~~hl~P~G~P~~L~p~mv~I 145 (227)
T MTH00073 66 GHKWALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIII 145 (227)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 75269999999999999999881176778547899999999999999999999985478889977987626999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
|++|+++||+||++||+|||+|||+++.++++....+.... ...+..+......+..+|++|+++|||||++|+++|
T Consensus 146 E~iS~liRPltL~vRL~ANm~AGHlll~l~~~~~~~l~~~~---~~~~~~~~~~~~~l~~lE~~Va~IQAYVF~lL~~lY 222 (227)
T MTH00073 146 ETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLM---PTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLY 222 (227)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999874799989999999861899999999999999998---999999999999999999999999999999999998
Q ss_pred HHHHC
Q ss_conf 73340
Q gi|254781088|r 241 IGDVY 245 (250)
Q Consensus 241 i~~a~ 245 (250)
++|++
T Consensus 223 ~~e~i 227 (227)
T MTH00073 223 LQENV 227 (227)
T ss_pred HHCCC
T ss_conf 60519
No 18
>MTH00179 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=351.41 Aligned_cols=201 Identities=29% Similarity=0.470 Sum_probs=185.0
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHH
Q ss_conf 99998314655378864035677887567877520576675302589999998512323230124544310355421467
Q gi|254781088|r 42 IFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFS 121 (250)
Q Consensus 42 ~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~la 121 (250)
.+.....++.+++|+|+|...|+..+++.++++++.|++++||.|++.|+|+||+++|++|++||.++||||+++|+++|
T Consensus 27 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~slF~fIl~~Nl~GliP~~ft~Ts~l~~t~~la 106 (227)
T MTH00179 27 PWLLFITPNNRWLGNRSSTLQGWFTNTFTGQLFQPLNKGGHKWAVLLTSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLA 106 (227)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 99998731403325899999999999999999976387786708999999999999999760287778457799999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999841586421113899998754302333567765441333335777877768999999999999999878
Q gi|254781088|r 122 LLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIG 201 (250)
Q Consensus 122 l~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~ 201 (250)
+++|+++.+.|+++++.++++|++|+|+|.++.|+++++|++|+++||+||++||+|||+|||++++++++..+......
T Consensus 107 l~~w~~~~~~g~~~~~~~~~~~l~P~G~P~~L~p~lv~IE~iS~~iRP~tL~vRL~aNm~AGHlll~l~~~~~~~~~~~~ 186 (227)
T MTH00179 107 LPLWLGTVLIGFRNQPTIALAHLLPEGTPTFLVPMLVIIETISIFIRPLALGVRLTANLTAGHLLMHLISSAVFVLMGIM 186 (227)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999996435562234888873149899999999999882899999999999887999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999999999999999999999999999999999973340
Q gi|254781088|r 202 MLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGDVY 245 (250)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a~ 245 (250)
...+..+......+..+|++|++||||||++|+++|++|++
T Consensus 187 ---~~~~~~~~~~~~~l~~lE~~Va~IQAYVF~~L~~lYi~e~~ 227 (227)
T MTH00179 187 ---GLLGLLTLLLLFLLTILEVAVAFIQAYVFVLLLSLYLQENL 227 (227)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ---99999999999999999999999999999999999972509
No 19
>PRK13418 consensus
Probab=100.00 E-value=0 Score=345.41 Aligned_cols=212 Identities=24% Similarity=0.459 Sum_probs=186.3
Q ss_pred EEEEEECCEEEECC-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CCCHHHHHH
Q ss_conf 00014248346410-899999999999999999831465537886403567788756787752057667--530258999
Q gi|254781088|r 14 IVPIQVQGFDLSFT-NSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQS--KNFFPFVFS 90 (250)
Q Consensus 14 l~~~~i~~~~~~it-~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~--~~~~p~i~T 90 (250)
+.+++.+|+.+.++ .++++.|+++++++++.+ .+||.+.+|+|.|++.|+++|+++|+++|++|++. ++++|+..|
T Consensus 48 ~~~~~~~~~~~~~n~~Tii~tw~Vm~~lIi~a~-~~Rkl~~VP~r~Q~~~E~i~eFi~~mv~~~i~~~k~~k~~f~~~~T 126 (284)
T PRK13418 48 IVDLSDKGWFFRINPMTIIMSFAIMIFLILFAY-RLRKFEIIPDRKQSFVESILEFFYEIVEDSIPDPRFVKPTFVIATT 126 (284)
T ss_pred EEECCCCCEEEECCCHHHHHHHHHHHHHHHHHH-HCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 897688830340471579999999999999999-7066623872889999999999999999855885610022479999
Q ss_pred HHHHHHCCCCC-CCHHH--------------------HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCC
Q ss_conf 99985123232-30124--------------------54431035542146799999999999841586-4211138999
Q gi|254781088|r 91 LFVFLTTANLL-GLHPY--------------------LFSFTSQIVVTTSFSLLVVLSVVISGFYVNGL-GFLRLFIPKD 148 (250)
Q Consensus 91 lF~fIl~~Nll-GLiP~--------------------~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~-~~~~~~~~~g 148 (250)
+|+||+++|++ |++|+ .++||||+|+|+++|+.+++.++++|+|++|. +|+|++..|
T Consensus 127 LFlfI~~~N~l~gliPgi~~~~~~~~~~~~~~lf~~~w~SPTaDln~TlaLAl~vfvl~~~~gIk~kG~~gylK~f~~P- 205 (284)
T PRK13418 127 LFLYISISNIIGGAIPGISVVAVETGTVQKVVLFSDTWFSPTSDLNTNLTYAVMVFVISHVFAIKSKGIKEWLKSWFEP- 205 (284)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC-
T ss_conf 9999999999825688754444556420101112346879998868999999999999999999972748988875583-
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98754302333567765441333335777877768999999999999999878899999999999999999999999999
Q gi|254781088|r 149 IPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFM 228 (250)
Q Consensus 149 ~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~i 228 (250)
.|+|.|+|++|+++||+|||+||||||+|||+++.+++.+.... .+.+..|.+||++++.+
T Consensus 206 -----~p~mlPinII~elarPlSLslRLFGNI~aGeii~~ll~~l~~~~--------------~~p~~l~~~F~lfvg~I 266 (284)
T PRK13418 206 -----NPFMFPMNIIGELAKPISHSLRLFGNIGGGAILVYILSYMVKYL--------------FLPVFLWGFFGIFVGLI 266 (284)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHH
T ss_conf -----15884899999988688999999876666289999999999999--------------99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999733401
Q gi|254781088|r 229 QAYIFMVLACVYIGDVYR 246 (250)
Q Consensus 229 QAyVF~~Lt~~Yi~~a~~ 246 (250)
|||||++||++|+++|++
T Consensus 267 QAfVF~mLT~vYIs~avs 284 (284)
T PRK13418 267 QAFVFSMLAVAYISSQLS 284 (284)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999974409
No 20
>MTH00132 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=345.78 Aligned_cols=227 Identities=27% Similarity=0.430 Sum_probs=195.6
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98764467312450001424834641089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
|+.+-+|||..+....+ + + .|+.... ........+.++.|+|.+...++..+...++..+..+++
T Consensus 1 M~~nlF~qF~~~~~~~~-------~-----l-~~~~~~~--~~~l~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~ 65 (227)
T MTH00132 1 MTLSFFDQFMSPTFLGI-------P-----L-IALALTL--PWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVG 65 (227)
T ss_pred CCCCHHCCCCCCHHHHH-------H-----H-HHHHHHH--HHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 95312054579176248-------8-----9-9999999--999988231756445999999999999999998635877
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 75302589999998512323230124544310355421467999999999998415864211138999987543023335
Q gi|254781088|r 81 SKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFI 160 (250)
Q Consensus 81 ~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~i 160 (250)
++||.|++.|+|+||+++|++|++||.++||+|+++|+++|++.|+++++.|+|+++.++++|++|+|+|.++.|+++++
T Consensus 66 g~k~~p~l~slF~fIl~~NllGLiPy~ft~Tshl~~tl~LAl~~wl~~~i~G~~~~~~~~l~h~~P~GtP~~L~P~lv~I 145 (227)
T MTH00132 66 GHKWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIII 145 (227)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 88669999999999999999870287778548899999999999999999999982488999966875513899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67765441333335777877768999999999999999878899999999999999999999999999999999999999
Q gi|254781088|r 161 EVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVY 240 (250)
Q Consensus 161 E~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Y 240 (250)
|++|+++||+||++||+|||+|||+++.++++..+...... ...+..+......+..+|++||+||||||++|+++|
T Consensus 146 E~iS~~iRP~sL~vRL~ANm~AGHlll~ll~~~~~~l~~~~---~~~~~l~~~~~~~l~~LE~~Va~IQAYVF~lL~~lY 222 (227)
T MTH00132 146 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLM---PTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLY 222 (227)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987202278779999999981999999999999999999---999999999999999999999999999999999998
Q ss_pred HHHHC
Q ss_conf 73340
Q gi|254781088|r 241 IGDVY 245 (250)
Q Consensus 241 i~~a~ 245 (250)
++|++
T Consensus 223 i~e~i 227 (227)
T MTH00132 223 LQENV 227 (227)
T ss_pred HHCCC
T ss_conf 71519
No 21
>MTH00176 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=343.07 Aligned_cols=195 Identities=29% Similarity=0.504 Sum_probs=176.1
Q ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHH
Q ss_conf 99831465537886403567788756787752057667530258999999851232323012454431035542146799
Q gi|254781088|r 44 AFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLL 123 (250)
Q Consensus 44 ~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~ 123 (250)
.....++.|.+|||+|.+.|+..++++++++++.|+++++|.|++.|+|++|+++|++|++||.+++|+|+++|+++|++
T Consensus 29 ~~~~~~~~w~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~slF~fIl~~Nl~GliP~~f~~Ts~l~~t~~lal~ 108 (224)
T MTH00176 29 LLLMMSGVWFCPSRFQVLLQMLSDFSPPVLLSSKGSYISGWAGLIFSLFILLMSLNLSGLIPHVFTPTSHLLLTLSLALP 108 (224)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99981114712829999999999999999997727676555999999999999999876238788862759999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999984158642111389999875430233356776544133333577787776899999999999999987889
Q gi|254781088|r 124 VVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGML 203 (250)
Q Consensus 124 ~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~ 203 (250)
+|+++++.|+|+++.++++|++|+|+|+++.|+++++|++|+++||+||++||+|||+|||+++.++++.......
T Consensus 109 ~w~~~~~~g~~~~~~~~~~~~~P~G~P~~L~p~l~~IE~iS~liRPltL~vRL~aNm~AGHill~l~~~~~~~~~~---- 184 (224)
T MTH00176 109 LWLGVIFSSFFFNFNNRLSHLLPQGTPWWLNPFLVWIELVSLLIRPLTLAVRLAANLAAGHVLLGLLGWLLLPVGG---- 184 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_conf 9999999999971088888707999724899999999999999958999999999999889999999999998999----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999997334
Q gi|254781088|r 204 GIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGDV 244 (250)
Q Consensus 204 ~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a 244 (250)
............+..+|++|++||||||++|+++|++|.
T Consensus 185 --~~~~~~~~~~~~~~~~E~~V~~IQAYVF~lL~~lY~~eh 223 (224)
T MTH00176 185 --LCFSGLSIPAVLYFLFEIAVCMVQGYVFFLLLSLYLDDH 223 (224)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf --999999999999999999999999999999999994467
No 22
>MTH00173 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=338.01 Aligned_cols=206 Identities=32% Similarity=0.498 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 99999999983146553788640356778875678775205766753025899999985123232301245443103554
Q gi|254781088|r 37 LLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVV 116 (250)
Q Consensus 37 ~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~ 116 (250)
+.+.........++.+..|+|+|...|++.++++++++++.|+++++|.|++.|+|++|+++|++|++||.+++|+|+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slF~fIl~~Nl~GliP~~f~~Ts~l~~ 103 (231)
T MTH00173 24 WLLSLFSLFFFSSSYWISPSNLLFSLSSPKSTISKQFTRSFGLNLGGFSLFLSSLFLFLINLNLLGLLPFVFSTTSSLAF 103 (231)
T ss_pred HHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 99999999985652023683899999999999999999772868865599999999999999984620778696021999
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21467999999999998415864211138999987543023335677654413333357778777689999999999999
Q gi|254781088|r 117 TTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTS 196 (250)
Q Consensus 117 t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~ 196 (250)
|+++|++.|.+.++.|+++++.++++|++|+|+|.++.|+++++|++|.++||+||++||+|||+|||+++.++++....
T Consensus 104 t~~Lal~~w~~~~~~g~~~~~~~~~~~~~p~g~P~~l~p~~v~iE~iS~~iRPltL~vRL~aNm~aGHill~li~~~~~~ 183 (231)
T MTH00173 104 TFSLALPLWLSLILSSYIKSPKSSLAFLLPSGAPLALNPFLVLIETLSILIRPLTLTVRLLANISAGHIILTLIGNYLSS 183 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999981066646507777621898999999999998707999999999999869999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998788999999999999999999999999999999999999997334
Q gi|254781088|r 197 MMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGDV 244 (250)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a 244 (250)
....+ +.............+..+|++|++||||||++|+++|.+|.
T Consensus 184 ~~~~~--~~~~~~~~~~~~~~~~~lE~~V~~IQAYVF~~L~~lY~~eh 229 (231)
T MTH00173 184 SLLSS--SVVILLLLLLIQVGYGIFEVGVMLIQAYIFSLLIKLYSDDH 229 (231)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99988--89999999999999999999999999999999999976638
No 23
>MTH00146 consensus
Probab=100.00 E-value=0 Score=336.84 Aligned_cols=205 Identities=32% Similarity=0.494 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
Q ss_conf 99999999983146553788640356778875678775205766753025899999985123232301245443103554
Q gi|254781088|r 37 LLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVV 116 (250)
Q Consensus 37 ~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~ 116 (250)
+++.........++.+..|+|+|+..|+..+++.++++++.+++.++|.|++.|+|++|+++|++|++||.+++|+|+++
T Consensus 24 ~~~~l~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tlF~fIl~~Nl~GL~P~~f~~Ts~l~~ 103 (231)
T MTH00146 24 WLLSLWSLFFFSSSYWISPSSLEFSLSWPKSTISKQFTRSFGSNLGGFSLLLSSLFLFLITLNLLGLLPFVFSVTSHLAF 103 (231)
T ss_pred HHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 99999999985740361283899999999999999999762878764599999999999999983553778697322999
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21467999999999998415864211138999987543023335677654413333357778777689999999999999
Q gi|254781088|r 117 TTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTS 196 (250)
Q Consensus 117 t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~ 196 (250)
|+++|+++|+..++.|+++++.++++|++|+|+|.++.|+++++|++|+++||+||++||+|||+|||+++.++++....
T Consensus 104 t~~Lal~~w~~~~~~g~~~~~~~~~~~~~p~g~P~~l~p~l~~IE~is~~iRPltL~vRL~aNm~aGHill~li~~~~~~ 183 (231)
T MTH00146 104 TFSLALPLWLSLILSSLFYSPYSSLAHLLPSGAPLALNPFLVLIETLSILIRPLTLTVRLAANISAGHIILTLIGNYLSF 183 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999975178700068888722898899999999996717999999999999879999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99878899999999999999999999999999999999999999733
Q gi|254781088|r 197 MMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGD 243 (250)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~ 243 (250)
..... +...........+.+..+|++|+++|||||++|+++|.+|
T Consensus 184 ~~~~~--~~~~~~~~~~~~~~~~~lE~~V~~iQAYVF~~L~~lY~~e 228 (231)
T MTH00146 184 SLLSS--SYVILLLLLLIQVGYGIFEVGVMLIQAYIFSLLIKLYTDD 228 (231)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99988--8999999999999999999999999999999999998665
No 24
>KOG4665 consensus
Probab=100.00 E-value=0 Score=335.10 Aligned_cols=245 Identities=36% Similarity=0.646 Sum_probs=215.4
Q ss_pred CCCCCHHHHCCCCEEEEEECCEEEECCHH-----HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98764467312450001424834641089-----9999999999999999831465537886403567788756787752
Q gi|254781088|r 1 MSKSPMSQFIVQKIVPIQVQGFDLSFTNS-----SLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCD 75 (250)
Q Consensus 1 m~~sP~~~f~~~~l~~~~i~~~~~~it~~-----~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~ 75 (250)
|..||.|||+.+.++. ..+++.+.+++. ....++...++.-+.....++.|.+|+|+|+.+|.+.|+++|..|.
T Consensus 1 ~i~spl~qfe~~~~~~-~~~n~~~~f~~~~l~~~~~~t~v~l~~i~~~~~~~~~~~~~ips~~n~~~e~il~~l~~l~k~ 79 (252)
T KOG4665 1 MITSPLDQFEIEILFG-VLQNFYFDFSNFNLFAQSLLTLVVLLIILGFVTLAGSNNKTIPSRWNILVEAILDFLLNLFKT 79 (252)
T ss_pred CCCCHHHHCEEEEEEH-HHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9787465012011111-000224643657899999999999999999998456566456268999999999999999987
Q ss_pred HCCC-CCC-CCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 0576-675-30258999999851232323012454431035542146799999999999841586421113899998754
Q gi|254781088|r 76 SAGN-QSK-NFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLI 153 (250)
Q Consensus 76 ~~g~-~~~-~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l 153 (250)
++|+ ++. .|+|++.|+|.+|+++|+.|++||.++||+|+..|+++|...|.+..+.|+++||.++++++.|+|+|.++
T Consensus 80 qig~~~~~~~~~p~i~slFlfIl~~Nl~Glipysf~~t~~l~~tlala~~iwlg~~i~gl~sh~~~~fa~f~p~Gtp~pL 159 (252)
T KOG4665 80 QIGGSKGNVMYFPFIISLFLFILFCNLLGLIPYSFTPTSHLGFTLALAISIWLGTTILGLQSHGLHFFAYFLPAGTPLPL 159 (252)
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCH
T ss_conf 50688997301149999999999997750236230541689999999999999999999997150433677789996540
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30233356776544133333577787776899999999999999987889999999999999999999999999999999
Q gi|254781088|r 154 KPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIF 233 (250)
Q Consensus 154 ~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF 233 (250)
.|+++.+|.+|+++||.||+.||.+||.|||+++.++++..+..+..+......+.. ......+.+|++|+.||||||
T Consensus 160 ~p~lvlIE~iS~~~r~lsL~vRL~aNi~aGHLl~~iL~~~~~~~m~~nli~l~i~~~--~~ilal~~LE~~va~IQaYVF 237 (252)
T KOG4665 160 IPFLVLIETISYLIRPLSLGVRLTANILAGHLLMNILGGLLFTMMLMNLIFLVIGAI--FIILALTMLELAVAIIQAYVF 237 (252)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_conf 579999999998724245676741358889999999988899999988999999999--999999999999999999999
Q ss_pred HHHHHHHHHHHCCCC
Q ss_conf 999999973340103
Q gi|254781088|r 234 MVLACVYIGDVYRSD 248 (250)
Q Consensus 234 ~~Lt~~Yi~~a~~~~ 248 (250)
+.|++.|++|+.|.|
T Consensus 238 aiL~~lYl~d~~~lh 252 (252)
T KOG4665 238 AILIALYLNDSMNLH 252 (252)
T ss_pred HHHHHHHHCCCCCCC
T ss_conf 999999952011379
No 25
>MTH00005 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=338.16 Aligned_cols=197 Identities=30% Similarity=0.491 Sum_probs=179.0
Q ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHH
Q ss_conf 99831465537886403567788756787752057667530258999999851232323012454431035542146799
Q gi|254781088|r 44 AFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLL 123 (250)
Q Consensus 44 ~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~ 123 (250)
......+.|.+|+|+|...|...+.+.++++++.|++.+++.|++.|+|++|+++|++|++||.+++|+|+++|+++|++
T Consensus 33 ~~~~~~~~w~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slF~fIl~~Nl~GliP~~ft~Tshl~~t~~lal~ 112 (231)
T MTH00005 33 ILLISSSFWITPNRLSTITSPPKSTMFTQLSRTFGTHIKGFSSIISSLFIIIILMNLSGLIPYVFSTSSHLIFTLTLGLP 112 (231)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99971324732819999999999999999999846366551999999999999999977217677854789999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999984158642111389999875430233356776544133333577787776899999999999999987889
Q gi|254781088|r 124 VVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGML 203 (250)
Q Consensus 124 ~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~ 203 (250)
.|++.++.|+++++.++++|++|+|+|.++.|+++++|++|+++||+||++||+|||.|||+++++++.........+
T Consensus 113 ~w~~~~~~g~~~~~~~~~~hlvP~G~P~~L~p~mv~IE~iS~~iRPlTLsiRL~aNm~AGHill~ll~~~~~~~~~~~-- 190 (231)
T MTH00005 113 LWLSLILSSFSNSPKKFAAHLLPGGAPDWLNPFLVLIETISISVRPITLSFRLAANMSAGHIVLSLMGIYCASALFSS-- 190 (231)
T ss_pred HHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 999999999996448885536899985579989999999988232499999999999875999999999999999988--
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999999733
Q gi|254781088|r 204 GIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGD 243 (250)
Q Consensus 204 ~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~ 243 (250)
...........+.+..+|++|++||||||++|++.|.+|
T Consensus 191 -~~~~~~~~~~~~~~~~lE~~Va~IQAYVFtlL~~lY~~e 229 (231)
T MTH00005 191 -ILSLILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229 (231)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf -999999999999999999999999999999999997656
No 26
>MTH00157 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=328.89 Aligned_cols=193 Identities=32% Similarity=0.533 Sum_probs=173.7
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 831465537886403567788756787752057667-5302589999998512323230124544310355421467999
Q gi|254781088|r 46 FAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQS-KNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLV 124 (250)
Q Consensus 46 ~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~-~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~ 124 (250)
....+.+..|+|+|...|+..++++++++++.++|. +++.|++.|+|++|+.+|++|++||.++||+|+++|+++|+++
T Consensus 31 ~~~~~~w~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tlF~fIl~~Nl~GLiP~~fs~Ts~l~~tl~lal~~ 110 (225)
T MTH00157 31 FIPSSFWLIPSRYSILWKSILKTLHKEFKTLLSPSKHKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLVLTLSLALPL 110 (225)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98788882494799999999999999999871655542559999999999999998647698879851399999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999841586421113899998754302333567765441333335777877768999999999999999878899
Q gi|254781088|r 125 VLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLG 204 (250)
Q Consensus 125 ~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~ 204 (250)
|+++++.|+++++.++++|++|+|+|.++.|+++++|++|+++||+||++||+|||+|||+++.++++.......
T Consensus 111 w~~~~~~g~~~~~~~~~~hl~P~g~P~~L~p~lv~IE~iS~liRPltLsvRL~aNm~AGHill~ll~~~~~~~~~----- 185 (225)
T MTH00157 111 WLSFMLYGWINNTNHMFAHLVPQGTPMILMPFMVLIETISNLIRPITLSVRLAANMIAGHLLLTLLGNTGPSLSS----- 185 (225)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_conf 999999999983499898853556623899999999999873203899899999998768999999999999999-----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999997334
Q gi|254781088|r 205 IAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGDV 244 (250)
Q Consensus 205 ~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a 244 (250)
..........+.+..+|++||++|||||++|+++|.+|-
T Consensus 186 -~~~~~~~~~~~~~~~lE~~V~~iQAYVF~lL~~lY~~e~ 224 (225)
T MTH00157 186 -LILSILLIIQILLLILESAVAIIQSYVFSVLSTLYSSEV 224 (225)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -999999999999999999999999999999999997520
No 27
>MTH00089 consensus
Probab=100.00 E-value=0 Score=279.49 Aligned_cols=167 Identities=26% Similarity=0.385 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 78875678775205766753025899999985123232301245443103554214679999999999984158642111
Q gi|254781088|r 64 IIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRL 143 (250)
Q Consensus 64 ~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~ 143 (250)
++.......++.+..+|..++.|++.++|++|+.+|++|++||.+++|||+++|+++|++.|++....|+++++.++++|
T Consensus 16 ~ll~~~~~~~~~~~~~k~~~~~~~~~slF~fIl~~NllGL~Py~Ft~TSHl~~tl~lal~lWl~~~i~g~~~~~~~~lsh 95 (183)
T MTH00089 16 FLLLAFILIIKMNFTNKFFLNFQIFESLIFSLILLNMLGLIPYFWSPTSYLWGNLLLSFLTWGLYFFSKLFKFLKFWMSH 95 (183)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999971512798999999999999999998704876797789999999999999999999999878999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 38999987543023335677654413333357778777689999999999999998788999999999999999999999
Q gi|254781088|r 144 FIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEF 223 (250)
Q Consensus 144 ~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel 223 (250)
++|+|+|.++.|+++++|++|.++||+|||+||+|||.|||+++.++++.... ..........+|+
T Consensus 96 llP~GtP~~L~PfmVlIE~iS~liRPltLsvRL~ANm~AGHlll~Ll~~~~~~--------------~~~~~~~l~~lE~ 161 (183)
T MTH00089 96 LLPYGSPLFLWPFLIILEMVSQLIRPLTLSLRLMCNLIAGHVMISLISSMKFK--------------FLILLIIIIFFEM 161 (183)
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHH
T ss_conf 77899837799999999999999929999999999998769999999999999--------------9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999997334
Q gi|254781088|r 224 FVAFMQAYIFMVLACVYIGDV 244 (250)
Q Consensus 224 ~v~~iQAyVF~~Lt~~Yi~~a 244 (250)
+||+||||||++|++.|++|.
T Consensus 162 ~Va~IQAYVFtlL~~LY~~E~ 182 (183)
T MTH00089 162 CVALIQSVVFSLLNLIYFKEL 182 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999987642
No 28
>TIGR01131 ATP_synt_6_or_A ATP synthase F0, A subunit; InterPro: IPR000568 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (F-, V- and A-ATPases contain rotary motors) and in the type of ions they transport , . F-ATPases (F1F0-ATPases) in mitochondria, chloroplasts and bacterial plasma membranes are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases) are primarily found in eukaryotic vacuoles, catalysing ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases) are found in Archaea and function like F-ATPases. P-ATPases (E1E2-ATPases) are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis . These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. This entry represents subunit A (or subunit 6) found in the F0 complex of F-ATPases. This subunit is a key component of the proton channel, and may play a direct role in the translocation of protons across the membrane. Catalysis in the F1 complex depends upon the rotation of the central stalk and F0 c-ring, which in turn is driven by the flux of protons through the membrane via the interface between the F0 c-ring and subunit A. The peripheral stalk links subunit A to the external surface of the F1 domain, and is thought to act as a stator to counter the tendency of subunit A and the F1 alpha(3)beta(3) catalytic portion to rotate with the central rotary element . More information about this protein can be found at Protein of the Month: ATP Synthases . ; GO: 0016820 hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances, 0015992 proton transport, 0016020 membrane, 0016469 proton-transporting two-sector ATPase complex.
Probab=100.00 E-value=0 Score=256.02 Aligned_cols=231 Identities=43% Similarity=0.747 Sum_probs=196.9
Q ss_pred CHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 44673124500014248346410899999999999999999831465537886403567788756787752057667530
Q gi|254781088|r 5 PMSQFIVQKIVPIQVQGFDLSFTNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNF 84 (250)
Q Consensus 5 P~~~f~~~~l~~~~i~~~~~~it~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~ 84 (250)
|++||..++.... .+.+..+++..+........... ....+.+|+|+|...|..++.+ +.++++.+++. |
T Consensus 1 ~~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~ 70 (234)
T TIGR01131 1 PFSQFDPSPLFGL--LGLDLSLTLLSLYLLLSLLLLLI-----LSSLWLIPSRWQSLLESLYEFV-SLVKSQIGGKG--F 70 (234)
T ss_pred CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHCCCHHHHHHHHHHHHH-HHHHHHCCCCH--H
T ss_conf 9641100245555--43455556899999999999999-----8887740304789999999999-99875215403--7
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 25899999985123232301245443103554214679999999999984158642111389999875430233356776
Q gi|254781088|r 85 FPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSS 164 (250)
Q Consensus 85 ~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is 164 (250)
.|++.++|.+++.+|+.|++||.+++|+|++.|+++|++.|.+..+.|.++++.++++++.|.|.|.++.|+++++|.+|
T Consensus 71 ~~~~~~~f~~~~~~n~~gl~p~~~~~t~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~p~g~p~~l~p~~~~~e~~~ 150 (234)
T TIGR01131 71 FPLILSLFLFILLSNLLGLLPYSFTPTSHLSLTLGLALPLWLGLTISGFRKHPLGFLAHLLPSGTPLPLLPFLVLIELIS 150 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999999998777652111101578999999999999999999998524677776504677357889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5441333335777877768999999999999999---8788999999999999999999999999999999999999997
Q gi|254781088|r 165 FLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMM---SIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYI 241 (250)
Q Consensus 165 ~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi 241 (250)
+++||+++++||++|+.|||+++.++++..+... ............+....+.+..+|++++++|||||++|++.|+
T Consensus 151 ~~~~p~~l~~rl~~n~~~Gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~e~~~~~~q~y~f~~l~~~y~ 230 (234)
T TIGR01131 151 YLARPLSLGLRLFANITAGHLLLTLLGGLLFSSSLLVSLALLLLLGGLLPLLILVALLGLELGVALIQAYVFTLLTCLYL 230 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99888888888876554578999999999999888888899999999999999999999999999999999999999986
Q ss_pred HHHC
Q ss_conf 3340
Q gi|254781088|r 242 GDVY 245 (250)
Q Consensus 242 ~~a~ 245 (250)
+|+.
T Consensus 231 ~~~~ 234 (234)
T TIGR01131 231 NDAL 234 (234)
T ss_pred HCCC
T ss_conf 3159
No 29
>MTH00087 ATP6 ATP synthase F0 subunit 6; Provisional
Probab=100.00 E-value=0 Score=259.10 Aligned_cols=185 Identities=25% Similarity=0.405 Sum_probs=152.5
Q ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHH
Q ss_conf 99999831465537886403567788756787752057667530258999999851232323012454431035542146
Q gi|254781088|r 41 FIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSF 120 (250)
Q Consensus 41 ~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~l 120 (250)
+..........+..|+|.+..+..+.+...+..+.. +|.++-.-...++|++|+.+|..|++||.++||||+.+|+++
T Consensus 10 fl~~~~l~~~~w~~~s~~~~l~~~~~~~l~~~f~~~--~k~~~~~~i~~~~F~fil~~N~~GL~Py~Ft~tshl~~tl~l 87 (194)
T MTH00087 10 FMFFFLLQFLFYFKLSMLNVLVKKFFSLLVLVFSFS--NKLPLSSVISEFTFIVLLMCNFGGLFPYFFSPCGYVEFNFLY 87 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 999999999999988799999999999999999999--836327999999999999999885158877968789999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999984158642111389999875430233356776544133333577787776899999999999999987
Q gi|254781088|r 121 SLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSI 200 (250)
Q Consensus 121 al~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~ 200 (250)
|++.|+++...+... .++.+|++|+|+|.++.|+|+++|++|+++||+|||+||+|||.|||+++.+++.....
T Consensus 88 al~~Wl~~~~~~~~~--~~~~~hl~P~GtP~~L~p~mv~IE~iS~~iRP~tLsvRL~ANm~AGHll~~ll~~~~~~---- 161 (194)
T MTH00087 88 AFVAWMSTFLSFLSS--EKFSSHMLPDGSPFFLWFFMLFVEIVSELSRPLALTLRLTCNLLVGHVMSSLILSLGFK---- 161 (194)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_conf 999999999999920--26787757899807899999999999999819999999999998889999999999999----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8899999999999999999999999999999999999999733
Q gi|254781088|r 201 GMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLACVYIGD 243 (250)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~ 243 (250)
.....+....+|++||.||||||++|++.|++|
T Consensus 162 ----------~~~~~~~~~~lE~~Va~IQaYVFs~L~~lYl~E 194 (194)
T MTH00087 162 ----------YLFLSILAIMFECFVAFIQSYIFSLLIYLYLNE 194 (194)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf ----------999999999999999999999999999998089
No 30
>MTH00050 ATP6 ATP synthase F0 subunit 6; Validated
Probab=100.00 E-value=1.5e-38 Score=217.07 Aligned_cols=145 Identities=24% Similarity=0.326 Sum_probs=130.8
Q ss_pred CCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 30258999999851232323012454431035542146799999999999841586421113899998754302333567
Q gi|254781088|r 83 NFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPKDIPLLIKPLVCFIEV 162 (250)
Q Consensus 83 ~~~p~i~TlF~fIl~~NllGLiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~g~p~~l~p~~~~iE~ 162 (250)
++..+...+++++++.|++|++||.+++|+|+.+|+++|++.|++....|..+++.+++++++|.|+|.++.|+++.+|+
T Consensus 22 ~~s~~y~~ll~~il~~nl~g~lPY~fs~tshl~~tl~l~lpl~lsl~l~~~~~~~~~ffs~fvP~GtP~~L~Pfl~~iEt 101 (171)
T MTH00050 22 NVSYYYSVLLFIVLFLFLLYRLPYIYSPFLFSVFLFVVVFPLFISLFLSRLFDSVNEFFSSFVPVGTPIYICPFVCIAET 101 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 29999999999999999986478441768999999999999999999999992989998997789992678469999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7654413333357778777689999999999999998788999999999999999999999999999999999999
Q gi|254781088|r 163 SSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFMVLAC 238 (250)
Q Consensus 163 is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~v~~iQAyVF~~Lt~ 238 (250)
+|+++||++|++|+++||.|||....++++..... .......+.++.+|++||.+|||||+.+..
T Consensus 102 IS~iiRP~~L~vRl~aNmsaG~~~~~~lg~l~~~~-----------~~~~~~lv~Lf~yEv~ValIq~yIf~~iLs 166 (171)
T MTH00050 102 ISYIIRPVVLILRPFINISLGCFGGVALGNLCFIS-----------YWWFLVLFFLFFYEVFVALVHWFIVSSILS 166 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987138998999999987799999998768999-----------999999999999999999999999999998
No 31
>KOG4664 consensus
Probab=89.65 E-value=0.77 Score=22.74 Aligned_cols=98 Identities=6% Similarity=0.070 Sum_probs=66.9
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH------HHHH
Q ss_conf 11138999987543023335677654413333357778777689999999999999998788-9999999------9999
Q gi|254781088|r 141 LRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSLRLFANMLAGHLMLKVFAGFSTSMMSIGM-LGIAFSF------LPVL 213 (250)
Q Consensus 141 ~~~~~~~g~p~~l~p~~~~iE~is~~~rp~sLs~RLfgNi~aG~iil~l~~~~~~~~~~~~~-~~~~~~~------~~~~ 213 (250)
.++..|++.+.++.+..+.+|..+.++.+-..-+|.-.|..++++++.++.+......+..- ...++.+ -.+.
T Consensus 119 ~gi~~~~p~evPlLnt~ILLsSgvtvtwahhsli~~~~~~~~~~ll~t~ll~vyFt~~Q~~EY~eapFTIsDgIyGStFf 198 (261)
T KOG4664 119 TGIEPVNPLEVPLLNTSILLSSGVTVTWAHHSLIEGNRKKATSSLLITVLLAVYFTGFQLIEYAEAPFTISDGIYGSTFF 198 (261)
T ss_pred CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEE
T ss_conf 51158997678513348998445367799999985534445321199999999999987988715765764364304434
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999997334
Q gi|254781088|r 214 ANVAVTGLEFFVAFMQAYIFMVLACVYIGDV 244 (250)
Q Consensus 214 ~~~~~~~lel~v~~iQAyVF~~Lt~~Yi~~a 244 (250)
+...+.++++.++. +.|+.-|+.+-
T Consensus 199 vaTGFHg~Hviig~------~fL~ic~iRql 223 (261)
T KOG4664 199 VATGFHGFHVIIGT------LFLPICFIRQL 223 (261)
T ss_pred EEHHHHHHHHHHHH------HHHHHHHHHHH
T ss_conf 40115668999987------99999999998
No 32
>TIGR00926 2A1704 Oligopeptide transporter (Peptide:H+ symporter); InterPro: IPR004768 Oligopeptide transporter, peptide:H+ symporter supports the proton-coupled intake of oligopeptides of 2 to 4 amino acids. These proteins may constitute a major route for the absorption of the end products of protein digestion.; GO: 0015198 oligopeptide transporter activity, 0006857 oligopeptide transport, 0016021 integral to membrane.
Probab=54.35 E-value=14 Score=16.21 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=57.2
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH---------H-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-CC
Q ss_conf 6753025899999985123232301245443---------1-03554214679999999999984158642111389-99
Q gi|254781088|r 80 QSKNFFPFVFSLFVFLTTANLLGLHPYLFSF---------T-SQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIP-KD 148 (250)
Q Consensus 80 ~~~~~~p~i~TlF~fIl~~NllGLiP~~~~~---------T-a~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~-~g 148 (250)
+.++-...++|+|= +--|-=+|+.-..|| . -|-=.++|++++..+.+...=+.--|.++.|+..| +|
T Consensus 144 ~q~~~~s~FFS~FY--faINAGSLiSt~iTPiLR~~~~CfGs~~~CypLAFGvPaiLMi~AlivF~~Gs~~YkK~PPs~~ 221 (781)
T TIGR00926 144 GQERMRSRFFSMFY--FAINAGSLISTIITPILRGSVKCFGSQQDCYPLAFGVPAILMIVALIVFMAGSFMYKKQPPSKG 221 (781)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 58999985201788--8987889999986254600024558885434200341689999999999830313475917866
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 987543023335677654413333357
Q gi|254781088|r 149 IPLLIKPLVCFIEVSSFLFRPVSLSLR 175 (250)
Q Consensus 149 ~p~~l~p~~~~iE~is~~~rp~sLs~R 175 (250)
|+++.++|.+.-++|
T Consensus 222 ------------Ni~~~V~~~I~~Al~ 236 (781)
T TIGR00926 222 ------------NIIFKVIRCIATALK 236 (781)
T ss_pred ------------CCHHHHHHHHHHHHH
T ss_conf ------------505788999999986
No 33
>TIGR00934 2a38euk potassium uptake protein, Trk family; InterPro: IPR004773 The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and Triticum aestivum (Wheat). The proteins of Escherichia coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterised. The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.; GO: 0015079 potassium ion transmembrane transporter activity, 0006813 potassium ion transport, 0016021 integral to membrane.
Probab=35.23 E-value=30 Score=14.56 Aligned_cols=76 Identities=9% Similarity=0.078 Sum_probs=54.4
Q ss_pred HHCCCCCCHHHHHHHHHHHHHH----HHHHCC-------CCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 3103554214679999999999----984158-------64211138999987543023335677654-41333335777
Q gi|254781088|r 110 FTSQIVVTTSFSLLVVLSVVIS----GFYVNG-------LGFLRLFIPKDIPLLIKPLVCFIEVSSFL-FRPVSLSLRLF 177 (250)
Q Consensus 110 ~Ta~l~~t~~lal~~~~~~~~~----g~~~~g-------~~~~~~~~~~g~p~~l~p~~~~iE~is~~-~rp~sLs~RLf 177 (250)
.-+|..++.-|=+++|+.+-++ ..|+.. ..-|..+.|.+..|||...++.++.+..+ .-.+-++=.-.
T Consensus 864 iiGNTGFP~fLR~~IW~l~k~~P~~S~~~E~~~fLlDHprrCFtlLfP~~aTWwL~~tL~gLn~~d~~lF~~LD~~S~vv 943 (1197)
T TIGR00934 864 IIGNTGFPIFLRFIIWILFKISPDLSKRKESLGFLLDHPRRCFTLLFPSGATWWLFLTLVGLNAIDLILFIILDLGSEVV 943 (1197)
T ss_pred HHHHCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHH
T ss_conf 97531346888887555420233212256787766086124466530225799999999999996344211231487264
Q ss_pred HHHHHHHH
Q ss_conf 87776899
Q gi|254781088|r 178 ANMLAGHL 185 (250)
Q Consensus 178 gNi~aG~i 185 (250)
..+.+|.=
T Consensus 944 ~~Ls~G~k 951 (1197)
T TIGR00934 944 KSLSKGIK 951 (1197)
T ss_pred HHCCCHHH
T ss_conf 33243144
No 34
>pfam11840 DUF3360 Protein of unknown function (DUF3360). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=30.86 E-value=36 Score=14.17 Aligned_cols=91 Identities=14% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHHHHCC-------CCCC-------CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 53025899999985123-------2323-------012454431035542146799999999999841586421113899
Q gi|254781088|r 82 KNFFPFVFSLFVFLTTA-------NLLG-------LHPYLFSFTSQIVVTTSFSLLVVLSVVISGFYVNGLGFLRLFIPK 147 (250)
Q Consensus 82 ~~~~p~i~TlF~fIl~~-------NllG-------LiP~~~~~Ta~l~~t~~lal~~~~~~~~~g~~~~g~~~~~~~~~~ 147 (250)
.||--++.++++.|+++ |+-| |+|-.....+| ++++++..=+.-...++.+.|-+ +..+..+
T Consensus 97 vR~ElLI~a~lF~il~SgflnP~ANLaGtHGPmIPLI~~ia~aGgH---PlAlgilig~fGl~Ls~~KGGS~-L~~LTs~ 172 (491)
T pfam11840 97 VRYELLIAALLFVILFSGFLNPRANLAGTHGPMIPLIPLIAAAGGH---PLALGILIGVFGLILSLFKGGSK-LVNLTSE 172 (491)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHCCCHH-HEECCCC
T ss_conf 7898889989999988640377655678788862048999973788---08999999999999998557135-2010046
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99875430233356776544133333577
Q gi|254781088|r 148 DIPLLIKPLVCFIEVSSFLFRPVSLSLRL 176 (250)
Q Consensus 148 g~p~~l~p~~~~iE~is~~~rp~sLs~RL 176 (250)
|+--.+...+-.+..+|.+.|..+-+--+
T Consensus 173 Gv~GGLLiyLGf~G~~~Qi~kl~~Wa~~~ 201 (491)
T pfam11840 173 GVCGGLLIYLGFIGTTSQIKKLFAWAGGF 201 (491)
T ss_pred CCCCCEEHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 63442001334400488888999887514
No 35
>KOG2877 consensus
Probab=30.52 E-value=36 Score=14.14 Aligned_cols=101 Identities=22% Similarity=0.308 Sum_probs=51.1
Q ss_pred CCCHHHHCCCCEEEEEECCEEEEC--CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 764467312450001424834641--089999999999999999983146553788640356778875678775205766
Q gi|254781088|r 3 KSPMSQFIVQKIVPIQVQGFDLSF--TNSSLAMLVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 3 ~sP~~~f~~~~l~~~~i~~~~~~i--t~~~l~~~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
-|++|.+-++|....-..-+...+ +-..+.-+...++-.+.......+...-+-||--+.-.+-.|++...+..=||+
T Consensus 28 ~S~Ls~yvl~pfW~~~v~~~P~wmAPNlITL~Gl~~~v~~~Ll~~~ydP~~~~~~P~W~y~a~alglFlYqTlDaiDGkQ 107 (389)
T KOG2877 28 NSLLSKYVLQPFWNWLVKVFPLWMAPNLITLIGLIFNVITVLLLLYYDPNLDEPAPRWTYFAAALGLFLYQTLDAIDGKQ 107 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 53467765208999999876250285089999899999999999841865689987479999999999987303556466
Q ss_pred CCCC---HHH----------HHHHHHHHHCCCCCCC
Q ss_conf 7530---258----------9999998512323230
Q gi|254781088|r 81 SKNF---FPF----------VFSLFVFLTTANLLGL 103 (250)
Q Consensus 81 ~~~~---~p~----------i~TlF~fIl~~NllGL 103 (250)
+||- .|+ +.|+|.-+-++-..|+
T Consensus 108 ARRTnsSsPLGELFDHG~DS~stvf~~l~~~s~~~~ 143 (389)
T KOG2877 108 ARRTNSSSPLGELFDHGCDSISTVFVTLAVCSAFGL 143 (389)
T ss_pred HCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 400789997376651351057889999999999679
No 36
>KOG1289 consensus
Probab=25.25 E-value=45 Score=13.62 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHCCC----CCCCCCCCC-CCC
Q ss_conf 6799999999999841586----421113899-998
Q gi|254781088|r 120 FSLLVVLSVVISGFYVNGL----GFLRLFIPK-DIP 150 (250)
Q Consensus 120 lal~~~~~~~~~g~~~~g~----~~~~~~~~~-g~p 150 (250)
.+..++-+-..+++-+.|. ++++..-|+ ++|
T Consensus 356 i~s~~a~SR~v~afaRDg~LP~S~~~~~v~~~t~~P 391 (550)
T KOG1289 356 ISSLTASSRLVYAFARDGGLPFSKYLAKVNPQTKVP 391 (550)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
T ss_conf 788888878886531368788763245327889984
No 37
>pfam01441 Lipoprotein_6 Lipoprotein. Members of this family are lipoproteins that are probably involved in evasion of the host immune system by pathogens.
Probab=23.77 E-value=45 Score=13.66 Aligned_cols=18 Identities=22% Similarity=0.573 Sum_probs=13.9
Q ss_pred CCHHHHHHHHHHHHCCCC
Q ss_conf 302589999998512323
Q gi|254781088|r 83 NFFPFVFSLFVFLTTANL 100 (250)
Q Consensus 83 ~~~p~i~TlF~fIl~~Nl 100 (250)
.....++|+|+||-|.|-
T Consensus 5 tlSAIlMTLflfiSCNNs 22 (209)
T pfam01441 5 TLSAILMTLFLFISCNNS 22 (209)
T ss_pred HHHHHHHHHHHHHCCCCC
T ss_conf 799999999998314589
No 38
>KOG0759 consensus
Probab=23.64 E-value=49 Score=13.45 Aligned_cols=17 Identities=24% Similarity=0.397 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 13333357778777689
Q gi|254781088|r 168 RPVSLSLRLFANMLAGH 184 (250)
Q Consensus 168 rp~sLs~RLfgNi~aG~ 184 (250)
.|+---=-..-|+--|+
T Consensus 216 ~PlDv~KTr~mN~~~~~ 232 (286)
T KOG0759 216 QPLDVLKTRIMNMKPGE 232 (286)
T ss_pred CHHHHHHHHHHHCCCCC
T ss_conf 86999999996337001
No 39
>KOG3491 consensus
Probab=23.04 E-value=43 Score=13.75 Aligned_cols=29 Identities=21% Similarity=0.525 Sum_probs=18.2
Q ss_pred HHHHHHCCCCCCC--CHHHHHHHHHHHHCCC
Q ss_conf 8775205766753--0258999999851232
Q gi|254781088|r 71 STLCDSAGNQSKN--FFPFVFSLFVFLTTAN 99 (250)
Q Consensus 71 ~~v~~~~g~~~~~--~~p~i~TlF~fIl~~N 99 (250)
+.+..+..++.++ ..|++..+|.|..+..
T Consensus 22 GnVakt~~~~e~kypvgPwLlglFvFVVcGS 52 (65)
T KOG3491 22 GNVAKTTTKKEKKYPVGPWLLGLFVFVVCGS 52 (65)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCH
T ss_conf 8743335674345885228988899986159
No 40
>PTZ00307 ethanolamine phosphotransferase; Provisional
Probab=21.05 E-value=56 Score=13.17 Aligned_cols=81 Identities=12% Similarity=0.152 Sum_probs=32.9
Q ss_pred CCCHHHHCCCCEEEEEECCEEEECCHHHHHH--HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 7644673124500014248346410899999--99999999999983146553788640356778875678775205766
Q gi|254781088|r 3 KSPMSQFIVQKIVPIQVQGFDLSFTNSSLAM--LVSLLVIFIFAFFAVSNCRVVPTRLQSFFEIIYQFIMSTLCDSAGNQ 80 (250)
Q Consensus 3 ~sP~~~f~~~~l~~~~i~~~~~~it~~~l~~--~i~~~il~~~~~~~~~~~~~vP~~~q~~~E~i~~~i~~~v~~~~g~~ 80 (250)
.|+.+.|.++|.-+.-..-+...+--..++. +...+.-.+..............+|.-+.-.+--|.+...+..-||+
T Consensus 38 ~S~ls~Yvl~p~w~~~v~~~P~w~APN~iTl~G~~~~~~~~~~~~~~~~~~~~~~P~W~~~~~a~~lf~YqtlD~~DGkq 117 (417)
T PTZ00307 38 SSIISRYVLQRYWNFIVNLVPMTVAPNCITFTGFLIGMSSAALLLYFYFFEEGVYPSWVLYYAAFALFAYQTLDAIDGKQ 117 (417)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 76788873089999999878685572799999999999999998752644457897469999999999998643114287
Q ss_pred CCC
Q ss_conf 753
Q gi|254781088|r 81 SKN 83 (250)
Q Consensus 81 ~~~ 83 (250)
+||
T Consensus 118 ARR 120 (417)
T PTZ00307 118 ARR 120 (417)
T ss_pred HHH
T ss_conf 863
Done!