RPSBLAST alignment for GI: 254781088 and conserved domain: TIGR03306
>gnl|CDD|132349 TIGR03306, altF1_A, alternate F1F0 ATPase, F0 subunit A. and in principle may run in either direction. This model represents the F0 subunit A of this apparent second ATP synthase. Length = 217
Score = 67.8 bits (166), Expect = 2e-12
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 56 TRLQSFFEIIYQFIMSTLCDSAGNQSKNFFPFVFSLFVFLTTANLLGLHPYLFSFTSQIV 115
+R Q+ E++ I + D + + + PF+ +LF+F+ ANLL + P T +
Sbjct: 48 SRWQNLLEVLVTGIQEQISDVGLAKPRKYLPFLGTLFLFIAVANLLSVIPGYEPPTGSLS 107
Query: 116 VTTSFSLLVVLSVVISGFYVNGL-GFLRLFIPKDIPLLIKPLVCFIEVSSFLFRPVSLSL 174
T + +L V ++V + G GL G+L+ ++ K P ++ P E+S R ++L++
Sbjct: 108 TTAALALCVFVAVPLFGIAERGLSGYLKSYL-KPTPFML-PFNIIGELS----RTLALAV 161
Query: 175 RLFANMLAGHLMLKVFAGFSTSMMSIGMLGIAFSFLPVLANVAVTGLEFFVAFMQAYIFM 234
RLF NM++G SM+ +L I+ PVL V L +QAYIF
Sbjct: 162 RLFGNMMSG------------SMILAILLSISPLIFPVLMQV----LGLLTGMVQAYIFS 205
Query: 235 VLACVYIG 242
VLA VYI
Sbjct: 206 VLATVYIA 213