Query gi|254781089|ref|YP_003065502.1| hypothetical protein CLIBASIA_04955 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 80
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed Jun 1 21:46:57 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781089.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2o5v_A DNA replication and re 65.4 3.4 0.0001 22.1 1.9 17 2-18 33-49 (190)
2 >3a4m_A L-seryl-tRNA(SEC) kina 65.0 2.6 7.8E-05 22.7 1.2 16 1-16 10-25 (182)
3 >1qhl_A Protein (cell division 64.5 3 8.8E-05 22.4 1.4 16 2-17 34-49 (227)
4 >1xew_X SMC protein; structura 60.9 4.2 0.00013 21.6 1.6 17 2-18 33-49 (139)
5 >2ywe_A GTP-binding protein LE 58.8 11 0.00033 19.4 3.5 26 1-26 12-37 (187)
6 >2ius_A DNA translocase FTSK; 57.8 5.2 0.00015 21.1 1.6 38 1-43 38-75 (377)
7 >1ii8_A RAD50 ABC-ATPase; MRE1 56.5 6.4 0.00019 20.6 1.9 19 2-20 30-49 (138)
8 >1f2t_A RAD50 ABC-ATPase; DNA 56.5 6.4 0.00019 20.6 1.9 19 2-20 30-49 (138)
9 >2it1_A 362AA long hypothetica 55.7 5.2 0.00015 21.1 1.4 18 1-18 35-52 (231)
10 >2iut_A DNA translocase FTSK; 53.9 6.4 0.00019 20.6 1.6 19 1-19 38-56 (392)
11 >1w1w_A Structural maintenance 53.5 7.7 0.00023 20.2 1.9 19 2-20 33-52 (232)
12 >3euj_A Chromosome partition p 52.7 8 0.00024 20.1 1.9 16 2-17 36-51 (281)
13 >1b0u_A Histidine permease; AB 52.3 5.9 0.00017 20.8 1.2 18 1-18 38-55 (262)
14 >2olj_A Amino acid ABC transpo 51.6 6.1 0.00018 20.7 1.2 19 1-19 56-74 (263)
15 >1oxx_K GLCV, glucose, ABC tra 49.4 5 0.00015 21.2 0.5 17 1-17 37-53 (243)
16 >1l2t_A Hypothetical ABC trans 49.0 7.1 0.00021 20.4 1.2 17 1-17 37-53 (235)
17 >1np6_A Molybdopterin-guanine 48.5 8.6 0.00025 19.9 1.6 16 2-17 13-28 (174)
18 >1z6g_A Guanylate kinase; stru 48.4 7.4 0.00022 20.3 1.2 17 1-17 29-45 (169)
19 >1mky_A Probable GTP-binding p 48.4 8 0.00024 20.1 1.4 16 1-16 7-22 (173)
20 >3dm5_A SRP54, signal recognit 48.2 7.5 0.00022 20.3 1.2 18 1-18 13-30 (192)
21 >1lvg_A Guanylate kinase, GMP 47.8 7.6 0.00023 20.2 1.2 17 1-17 10-26 (198)
22 >1xjc_A MOBB protein homolog; 47.6 9.1 0.00027 19.8 1.6 33 2-34 11-46 (169)
23 >1z47_A CYSA, putative ABC-tra 46.7 8.2 0.00024 20.1 1.2 18 1-18 47-64 (237)
24 >3dhw_C Methionine import ATP- 45.5 7.7 0.00023 20.2 0.9 18 1-18 37-54 (245)
25 >3cb4_D GTP-binding protein LE 45.4 13 0.0004 18.9 2.1 23 1-23 10-32 (185)
26 >1ega_A Protein (GTP-binding p 45.2 9.6 0.00028 19.7 1.4 17 1-17 14-30 (181)
27 >2qtf_A Protein HFLX, GTP-bind 45.1 9.7 0.00029 19.7 1.4 17 1-17 14-30 (193)
28 >1q3t_A Cytidylate kinase; nuc 44.9 9.1 0.00027 19.8 1.2 17 1-17 22-38 (149)
29 >2h5e_A Peptide chain release 44.6 11 0.00031 19.5 1.5 24 1-24 19-42 (207)
30 >2c78_A Elongation factor TU-A 44.2 12 0.00036 19.1 1.8 22 1-22 17-38 (215)
31 >1mky_A Probable GTP-binding p 43.8 10 0.00031 19.5 1.4 17 1-17 13-29 (186)
32 >3d31_A Sulfate/molybdate ABC 43.3 7.6 0.00022 20.2 0.6 17 1-17 32-48 (224)
33 >1g29_1 MALK, maltose transpor 43.2 10 0.00029 19.6 1.2 18 1-18 35-52 (234)
34 >2j37_W Signal recognition par 42.9 12 0.00035 19.2 1.6 16 1-16 12-27 (190)
35 >1vpl_A ABC transporter, ATP-b 42.6 10 0.00031 19.5 1.2 16 1-16 47-62 (191)
36 >2pcj_A ABC transporter, lipop 42.5 9.1 0.00027 19.8 0.9 36 1-43 36-71 (224)
37 >2oap_1 GSPE-2, type II secret 42.3 11 0.00032 19.4 1.3 16 2-17 7-22 (186)
38 >1zun_B Sulfate adenylate tran 41.9 12 0.00036 19.1 1.5 22 1-22 30-51 (238)
39 >2d2e_A SUFC protein; ABC-ATPa 41.2 11 0.00033 19.3 1.2 16 1-16 35-50 (250)
40 >3gee_A MNME, tRNA modificatio 41.0 8 0.00024 20.1 0.4 17 1-17 17-33 (180)
41 >1yrb_A ATP(GTP)binding protei 40.7 11 0.00034 19.3 1.2 18 1-18 20-37 (262)
42 >3gfo_A Cobalt import ATP-bind 40.7 12 0.00034 19.3 1.2 16 1-16 40-55 (230)
43 >1g8f_A Sulfate adenylyltransf 40.5 14 0.0004 18.9 1.6 15 1-15 10-24 (120)
44 >2hjg_A GTP-binding protein EN 39.8 12 0.00036 19.2 1.2 16 1-16 9-24 (167)
45 >2qy9_A Cell division protein 39.7 14 0.00042 18.8 1.6 18 1-18 13-30 (198)
46 >2v3c_C SRP54, signal recognit 39.4 15 0.00045 18.6 1.6 20 1-20 14-33 (188)
47 >3dpu_A RAB family protein; ro 39.3 14 0.0004 18.9 1.4 16 1-16 11-26 (177)
48 >3a00_A Guanylate kinase, GMP 39.2 14 0.0004 18.9 1.4 21 1-21 7-28 (186)
49 >2dyk_A GTP-binding protein; G 39.1 13 0.0004 18.9 1.4 17 1-17 7-23 (161)
50 >1kag_A SKI, shikimate kinase 39.1 15 0.00044 18.7 1.6 16 1-16 10-25 (173)
51 >2awn_A Maltose/maltodextrin i 39.0 14 0.0004 18.9 1.4 17 1-17 35-51 (236)
52 >1tq4_A IIGP1, interferon-indu 38.7 12 0.00036 19.1 1.1 16 1-16 7-22 (197)
53 >3fvq_A Fe(3+) IONS import ATP 38.3 12 0.00037 19.1 1.1 18 1-18 36-53 (241)
54 >3bk7_A ABC transporter ATP-bi 38.2 13 0.00039 18.9 1.2 18 1-18 42-59 (226)
55 >2ccj_A DTMP kinase, thymidyla 38.1 13 0.00039 18.9 1.2 16 1-16 8-23 (205)
56 >1ye8_A Protein THEP1, hypothe 38.0 13 0.0004 18.9 1.2 16 1-16 6-21 (178)
57 >1kht_A Adenylate kinase; phos 37.9 16 0.00047 18.5 1.6 16 1-16 9-24 (192)
58 >2nq2_C Hypothetical ABC trans 37.5 14 0.00041 18.8 1.2 17 1-17 37-53 (214)
59 >1wf3_A GTP-binding protein; G 37.4 15 0.00044 18.7 1.4 16 1-16 13-28 (179)
60 >2rdo_7 EF-G, elongation facto 37.0 16 0.00046 18.6 1.4 24 2-25 17-40 (289)
61 >1znw_A Guanylate kinase, GMP 37.0 14 0.00042 18.8 1.2 18 1-18 26-43 (155)
62 >2ged_A SR-beta, signal recogn 36.8 15 0.00046 18.6 1.4 17 1-17 54-70 (193)
63 >2gks_A Bifunctional SAT/APS k 36.7 14 0.00043 18.7 1.2 16 1-16 10-25 (178)
64 >1lw7_A Transcriptional regula 36.6 15 0.00044 18.7 1.2 16 1-16 15-30 (204)
65 >1v43_A Sugar-binding transpor 36.5 15 0.00043 18.7 1.2 18 1-18 43-60 (239)
66 >3iby_A Ferrous iron transport 36.1 14 0.00042 18.8 1.1 17 1-17 7-23 (173)
67 >3con_A GTPase NRAS; structura 36.0 15 0.00045 18.6 1.2 16 1-16 27-42 (190)
68 >3a1s_A Iron(II) transport pro 35.7 15 0.00045 18.6 1.2 16 1-16 11-26 (173)
69 >2gza_A Type IV secretion syst 35.4 17 0.00052 18.3 1.4 18 2-19 39-56 (218)
70 >2cxx_A Probable GTP-binding p 35.0 15 0.00045 18.6 1.1 17 1-17 7-23 (190)
71 >1zuh_A Shikimate kinase; alph 34.9 19 0.00057 18.1 1.6 15 1-15 13-27 (168)
72 >1jjv_A Dephospho-COA kinase; 34.8 19 0.00056 18.1 1.6 15 2-16 9-23 (206)
73 >1nij_A Hypothetical protein Y 34.8 17 0.00049 18.4 1.2 17 2-18 11-27 (204)
74 >2cbz_A Multidrug resistance-a 34.7 15 0.00045 18.6 1.0 18 1-18 37-54 (237)
75 >1a7j_A Phosphoribulokinase; t 34.6 15 0.00045 18.6 1.0 16 2-17 12-27 (290)
76 >1yqt_A RNAse L inhibitor; ATP 34.4 17 0.00049 18.4 1.2 17 1-17 53-69 (276)
77 >1rkb_A Protein AD-004, protei 34.3 20 0.00058 18.0 1.6 15 1-15 10-24 (173)
78 >2yz2_A Putative ABC transport 34.3 17 0.00049 18.4 1.2 16 1-16 39-54 (266)
79 >2v54_A DTMP kinase, thymidyla 34.2 20 0.00059 18.0 1.6 16 1-16 10-25 (204)
80 >2jaq_A Deoxyguanosine kinase; 34.2 20 0.00058 18.0 1.6 17 1-17 6-22 (205)
81 >2hyd_A ABC transporter homolo 34.1 7.8 0.00023 20.2 -0.5 18 1-18 45-62 (179)
82 >2ghi_A Transport protein; mul 33.8 17 0.00051 18.3 1.2 18 1-18 52-69 (260)
83 >1svi_A GTP-binding protein YS 33.7 16 0.00049 18.4 1.1 17 1-17 29-45 (195)
84 >2yvu_A Probable adenylyl-sulf 33.6 20 0.00061 17.9 1.6 15 2-16 20-34 (186)
85 >1g6h_A High-affinity branched 33.4 18 0.00052 18.3 1.2 16 1-16 39-54 (179)
86 >3c8u_A Fructokinase; YP_61236 33.2 21 0.00063 17.8 1.6 55 1-61 28-96 (146)
87 >2wjg_A FEOB, ferrous iron tra 33.2 18 0.00053 18.3 1.2 16 1-16 13-28 (188)
88 >2pjz_A Hypothetical protein S 33.0 18 0.00053 18.2 1.2 16 1-16 36-51 (263)
89 >2z0h_A DTMP kinase, thymidyla 33.0 21 0.00063 17.8 1.6 16 1-16 6-21 (197)
90 >1ii2_A Phosphoenolpyruvate ca 32.9 16 0.00046 18.6 0.9 38 1-45 21-62 (241)
91 >1sgw_A Putative ABC transport 32.9 18 0.00054 18.2 1.2 18 1-18 41-58 (152)
92 >2eyu_A Twitching motility pro 32.9 25 0.00075 17.4 1.9 16 2-17 32-47 (261)
93 >1nrj_B SR-beta, signal recogn 32.7 20 0.00058 18.0 1.4 16 1-16 18-33 (218)
94 >2ewv_A Twitching motility pro 32.7 26 0.00077 17.4 2.0 37 2-38 19-58 (248)
95 >2axn_A 6-phosphofructo-2-kina 32.7 22 0.00064 17.8 1.6 17 1-17 15-31 (218)
96 >1e6c_A Shikimate kinase; phos 32.6 22 0.00065 17.8 1.6 15 1-15 8-22 (173)
97 >2pez_A Bifunctional 3'-phosph 32.6 22 0.00064 17.8 1.6 15 1-15 11-25 (179)
98 >2bbs_A Cystic fibrosis transm 32.6 16 0.00048 18.5 0.9 17 1-17 70-86 (290)
99 >2pbr_A DTMP kinase, thymidyla 32.5 19 0.00055 18.2 1.2 16 1-16 6-21 (195)
100 >3iev_A GTP-binding protein ER 32.4 20 0.00059 18.0 1.4 16 1-16 16-31 (204)
101 >1j3b_A ATP-dependent phosphoe 32.4 14 0.00042 18.8 0.6 36 1-43 15-50 (124)
102 >1rz3_A Hypothetical protein r 32.2 20 0.00058 18.0 1.3 15 2-16 29-43 (201)
103 >1ltq_A Polynucleotide kinase; 32.2 22 0.00066 17.7 1.6 17 1-17 8-24 (114)
104 >2nzj_A GTP-binding protein RE 32.1 20 0.0006 17.9 1.4 16 1-16 10-25 (175)
105 >2pze_A Cystic fibrosis transm 32.1 18 0.00052 18.3 1.0 17 1-17 40-56 (229)
106 >1y63_A LMAJ004144AAA protein; 32.1 22 0.00066 17.7 1.6 15 1-15 16-30 (184)
107 >2elf_A Protein translation el 32.0 11 0.00031 19.5 -0.1 17 1-17 27-43 (190)
108 >2hf9_A Probable hydrogenase n 32.0 17 0.0005 18.4 0.9 17 1-17 44-60 (226)
109 >2zu0_C Probable ATP-dependent 31.8 19 0.00058 18.1 1.2 17 1-17 52-68 (267)
110 >1mv5_A LMRA, multidrug resist 31.7 20 0.00058 18.0 1.2 23 1-23 34-56 (243)
111 >3h0k_A UPF0200 protein SSO104 31.6 26 0.00076 17.4 1.8 18 1-18 6-23 (178)
112 >2plr_A DTMP kinase, probable 31.6 23 0.00068 17.6 1.6 17 1-17 10-26 (213)
113 >1u8z_A RAS-related protein RA 31.6 21 0.00062 17.9 1.4 17 1-17 10-26 (168)
114 >2f1r_A Molybdopterin-guanine 31.5 14 0.00041 18.9 0.4 16 1-16 8-23 (121)
115 >1yqt_A RNAse L inhibitor; ATP 31.5 21 0.00063 17.8 1.4 22 1-22 42-63 (213)
116 >1ukz_A Uridylate kinase; tran 31.4 23 0.00069 17.6 1.6 15 1-15 21-35 (203)
117 >1knq_A Gluconate kinase; ALFA 31.2 24 0.0007 17.6 1.6 16 1-16 14-29 (175)
118 >2hjg_A GTP-binding protein EN 31.1 22 0.00064 17.8 1.4 16 1-16 14-29 (186)
119 >3ch4_B Pmkase, phosphomevalon 31.0 21 0.00063 17.9 1.3 16 1-16 17-32 (202)
120 >1ly1_A Polynucleotide kinase; 30.6 25 0.00073 17.5 1.6 16 1-16 8-23 (114)
121 >3hdt_A Putative kinase; struc 30.6 22 0.00064 17.8 1.3 15 2-16 21-35 (223)
122 >3i8s_A Ferrous iron transport 30.5 20 0.00059 18.0 1.1 16 1-16 9-24 (188)
123 >3cm0_A Adenylate kinase; ATP- 30.4 25 0.00074 17.5 1.6 15 2-16 11-25 (186)
124 >1p9r_A General secretion path 30.4 30 0.00087 17.1 1.9 17 2-18 28-44 (272)
125 >1xzp_A Probable tRNA modifica 30.3 13 0.00038 19.0 0.1 17 1-17 7-23 (169)
126 >2ff7_A Alpha-hemolysin transl 30.2 25 0.00075 17.5 1.6 38 1-45 41-78 (247)
127 >3tmk_A Thymidylate kinase; ph 30.0 23 0.00067 17.7 1.3 16 1-16 11-26 (216)
128 >2gj8_A MNME, tRNA modificatio 29.9 21 0.00061 17.9 1.1 16 1-16 10-25 (172)
129 >2p67_A LAO/AO transport syste 29.9 19 0.00057 18.1 0.9 18 1-18 62-79 (265)
130 >2ihy_A ABC transporter, ATP-b 29.8 22 0.00065 17.8 1.2 17 1-17 53-69 (249)
131 >2onk_A Molybdate/tungstate AB 29.8 24 0.0007 17.6 1.4 17 1-17 30-46 (228)
132 >2e87_A Hypothetical protein P 29.7 22 0.00065 17.8 1.2 16 1-16 11-26 (195)
133 >2qt1_A Nicotinamide riboside 29.6 23 0.00068 17.7 1.3 17 1-17 27-43 (207)
134 >1zo1_I IF2, translation initi 29.5 21 0.00062 17.9 1.0 19 1-19 10-28 (170)
135 >1nks_A Adenylate kinase; ther 29.5 21 0.00063 17.8 1.1 15 1-15 7-21 (194)
136 >1ek0_A Protein (GTP-binding p 29.5 22 0.00066 17.7 1.2 16 1-16 9-24 (170)
137 >3e70_C DPA, signal recognitio 29.4 27 0.00078 17.3 1.6 18 1-18 21-38 (200)
138 >1tev_A UMP-CMP kinase; ploop, 29.3 23 0.00067 17.7 1.2 16 1-16 9-24 (196)
139 >2pt7_A CAG-ALFA; ATPase, prot 29.3 21 0.00063 17.8 1.1 17 2-18 40-56 (192)
140 >1n0u_A EF-2, elongation facto 29.2 27 0.00081 17.3 1.6 19 1-19 25-43 (304)
141 >3b60_A Lipid A export ATP-bin 29.2 20 0.0006 18.0 0.9 19 1-19 44-62 (181)
142 >2jeo_A Uridine-cytidine kinas 28.8 51 0.0015 15.8 3.5 58 1-61 31-100 (181)
143 >2cdn_A Adenylate kinase; phos 28.7 28 0.00082 17.2 1.6 15 1-15 26-40 (201)
144 >2bdt_A BH3686; alpha-beta pro 28.7 28 0.00082 17.2 1.6 15 1-15 8-22 (189)
145 >3b5x_A Lipid A export ATP-bin 28.5 29 0.00084 17.2 1.6 22 1-22 52-73 (259)
146 >1zu4_A FTSY; GTPase, signal r 28.5 31 0.0009 17.0 1.7 17 1-17 15-31 (203)
147 >1lnz_A SPO0B-associated GTP-b 28.4 18 0.00052 18.3 0.5 17 1-17 6-22 (184)
148 >1nn5_A Similar to deoxythymid 28.3 25 0.00074 17.5 1.3 16 1-16 15-30 (215)
149 >2pt5_A Shikimate kinase, SK; 28.1 29 0.00086 17.1 1.6 15 1-15 6-20 (168)
150 >1p6x_A Thymidine kinase; P-lo 28.1 29 0.00085 17.1 1.6 15 2-16 14-28 (334)
151 >2yyz_A Sugar ABC transporter, 28.0 25 0.00073 17.5 1.2 18 1-18 35-52 (225)
152 >1ji0_A ABC transporter; ATP b 27.6 25 0.00075 17.4 1.2 16 1-16 38-53 (240)
153 >2iyv_A Shikimate kinase, SK; 27.2 31 0.00091 17.0 1.6 16 1-16 8-23 (169)
154 >2qpt_A EH domain-containing p 27.1 25 0.00074 17.5 1.1 16 1-16 14-29 (237)
155 >1qzx_A SRP54, signal recognit 26.9 30 0.00089 17.1 1.5 16 2-17 14-29 (193)
156 >2dpx_A GTP-binding protein RA 26.8 29 0.00085 17.2 1.4 16 1-16 13-28 (174)
157 >3g5u_A MCG1178, multidrug res 26.8 32 0.00093 16.9 1.6 20 1-20 47-66 (266)
158 >1h65_A Chloroplast outer enve 26.7 25 0.00075 17.4 1.1 17 1-17 45-61 (270)
159 >1azs_C GS-alpha; complex (lya 26.7 24 0.0007 17.6 0.9 17 1-17 46-62 (277)
160 >1g7s_A Translation initiation 26.6 32 0.00094 16.9 1.6 18 1-18 7-24 (217)
161 >2qi9_C Vitamin B12 import ATP 26.4 27 0.00081 17.3 1.2 16 1-16 32-47 (249)
162 >2p5s_A RAS and EF-hand domain 26.4 28 0.00082 17.2 1.2 16 1-16 34-49 (199)
163 >1wms_A RAB-9, RAB9, RAS-relat 26.2 28 0.00083 17.2 1.2 16 1-16 13-28 (177)
164 >2vli_A Antibiotic resistance 26.1 28 0.00083 17.2 1.2 15 1-15 11-25 (183)
165 >1zp6_A Hypothetical protein A 25.6 30 0.00089 17.1 1.3 15 2-16 16-30 (191)
166 >1wxq_A GTP-binding protein; s 25.4 30 0.0009 17.0 1.3 17 1-17 6-22 (221)
167 >2i3b_A HCR-ntpase, human canc 25.3 38 0.0011 16.5 1.7 17 2-18 8-24 (189)
168 >2wji_A Ferrous iron transport 24.9 30 0.0009 17.0 1.2 16 1-16 9-24 (165)
169 >1dar_A EF-G, elongation facto 24.6 30 0.00089 17.0 1.1 21 2-22 19-39 (283)
170 >2hxs_A RAB-26, RAS-related pr 24.4 37 0.0011 16.6 1.6 17 1-17 12-28 (178)
171 >1f5n_A Interferon-induced gua 24.4 26 0.00077 17.4 0.8 17 1-17 44-60 (312)
172 >2qm8_A GTPase/ATPase; G prote 24.4 31 0.00093 16.9 1.2 18 1-18 61-78 (337)
173 >2rgx_A Adenylate kinase; tran 24.2 32 0.00095 16.9 1.2 15 1-15 6-20 (148)
174 >3g5u_A MCG1178, multidrug res 24.1 30 0.00089 17.0 1.1 18 1-18 49-66 (287)
175 >3def_A T7I23.11 protein; chlo 24.0 31 0.00091 17.0 1.1 16 1-16 42-57 (262)
176 >1zcb_A G alpha I/13; GTP-bind 23.9 33 0.00096 16.9 1.2 17 1-17 39-55 (238)
177 >2h92_A Cytidylate kinase; ros 23.7 33 0.00098 16.8 1.2 16 1-16 9-24 (135)
178 >3foz_A TRNA delta(2)-isopente 23.7 33 0.00097 16.8 1.2 16 1-16 16-31 (232)
179 >1qhx_A CPT, protein (chloramp 23.5 40 0.0012 16.4 1.6 16 1-16 9-24 (178)
180 >1udx_A The GTP-binding protei 23.5 33 0.00098 16.8 1.2 16 1-16 6-21 (177)
181 >3llu_A RAS-related GTP-bindin 23.4 32 0.00094 16.9 1.1 16 1-16 26-41 (196)
182 >1cip_A Protein (guanine nucle 23.4 40 0.0012 16.4 1.6 18 1-18 38-55 (232)
183 >1yj5_A 5' polynucleotide kina 23.4 40 0.0012 16.4 1.6 15 1-15 27-41 (162)
184 >2j41_A Guanylate kinase; GMP, 23.3 43 0.0013 16.2 1.7 44 2-45 13-85 (158)
185 >2rhm_A Putative kinase; ZP_00 23.3 35 0.001 16.7 1.3 14 2-15 12-25 (193)
186 >1m8p_A Sulfate adenylyltransf 23.1 41 0.0012 16.3 1.6 16 1-16 11-26 (182)
187 >1cke_A CK, MSSA, protein (cyt 23.1 35 0.001 16.7 1.2 15 1-15 11-25 (143)
188 >3ld9_A DTMP kinase, thymidyla 23.0 41 0.0012 16.3 1.6 19 1-19 27-45 (223)
189 >2ixe_A Antigen peptide transp 22.9 35 0.001 16.7 1.2 18 1-18 51-68 (271)
190 >1bif_A 6-phosphofructo-2-kina 22.7 42 0.0012 16.3 1.6 15 1-15 45-59 (231)
191 >1rj9_A FTSY, signal recogniti 22.6 36 0.0011 16.6 1.2 17 1-17 13-29 (198)
192 >1via_A Shikimate kinase; stru 22.5 42 0.0013 16.2 1.6 15 1-15 10-24 (175)
193 >3cr8_A Sulfate adenylyltranfe 22.4 29 0.00086 17.1 0.7 15 1-15 11-25 (188)
194 >2c95_A Adenylate kinase 1; AP 22.4 38 0.0011 16.5 1.3 15 1-15 15-29 (196)
195 >1qf9_A UMP/CMP kinase, protei 22.4 38 0.0011 16.5 1.3 15 1-15 12-26 (194)
196 >2bwj_A Adenylate kinase 5; ph 21.7 40 0.0012 16.4 1.3 15 1-15 18-32 (199)
197 >3bk7_A ABC transporter ATP-bi 21.7 38 0.0011 16.5 1.2 16 1-16 123-138 (346)
198 >3a8t_A Adenylate isopentenylt 21.5 39 0.0011 16.4 1.2 16 1-16 46-61 (228)
199 >1f60_A Elongation factor EEF1 21.4 37 0.0011 16.6 1.1 17 2-18 14-30 (238)
200 >1d2e_A Elongation factor TU ( 21.3 40 0.0012 16.4 1.2 19 1-19 9-27 (197)
201 >2qag_B Septin-6, protein NEDD 21.2 42 0.0012 16.3 1.3 22 1-24 9-30 (388)
202 >1uj2_A Uridine-cytidine kinas 21.1 72 0.0021 15.0 3.9 58 2-60 29-96 (188)
203 >1wb1_A Translation elongation 21.0 36 0.0011 16.7 0.9 20 1-20 25-44 (194)
204 >2fh5_B SR-beta, signal recogn 21.0 43 0.0013 16.2 1.4 16 1-16 13-28 (214)
205 >1js9_A Coat protein, capsid p 20.6 62 0.0018 15.4 2.1 48 17-66 118-165 (189)
206 >2h57_A ADP-ribosylation facto 20.6 29 0.00086 17.1 0.4 16 1-16 27-42 (190)
207 >2vp4_A Deoxynucleoside kinase 20.6 31 0.00091 17.0 0.5 15 1-15 26-40 (230)
208 >1zak_A Adenylate kinase; ATP: 20.2 38 0.0011 16.5 0.9 16 1-16 11-26 (222)
209 >2ffh_A Protein (FFH); SRP54, 20.1 61 0.0018 15.4 1.9 17 2-18 13-29 (190)
210 >1knx_A Probable HPR(Ser) kina 20.1 45 0.0013 16.1 1.3 36 1-39 20-55 (158)
211 >2qu8_A Putative nucleolar GTP 20.1 43 0.0013 16.2 1.2 16 1-16 35-50 (228)
212 >2p38_A Protein involved in ri 20.1 56 0.0017 15.6 1.8 17 45-61 61-77 (94)
No 1
>>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans} (A:1-123,A:293-359)
Probab=65.43 E-value=3.4 Score=22.06 Aligned_cols=17 Identities=53% Similarity=0.741 Sum_probs=14.3
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|-..+|||++||||.+-
T Consensus 33 G~NGsGKSnileAI~~l 49 (190)
T 2o5v_A 33 GENGAGKTNLLEAAYLA 49 (190)
T ss_dssp CCTTSSHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
T ss_conf 99987199999999997
No 2
>>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A (A:1-182)
Probab=65.01 E-value=2.6 Score=22.68 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=14.0
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.|-|||||++.++-
T Consensus 10 iG~sGsGKSTl~r~L~ 25 (182)
T 3a4m_A 10 TGLPGVGKSTFSKNLA 25 (182)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999998999999999
No 3
>>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} (A:)
Probab=64.45 E-value=3 Score=22.41 Aligned_cols=16 Identities=31% Similarity=0.437 Sum_probs=13.8
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7454450268999987
Q gi|254781089|r 2 GLSESGKTTLLEAIFL 17 (80)
Q Consensus 2 glsesgkttlleaifl 17 (80)
|-..+||||+++||.+
T Consensus 34 G~NgsGKStil~Ai~~ 49 (227)
T 1qhl_A 34 GGNGAGKSTTMAAFVT 49 (227)
T ss_dssp SCCSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 8999987999999999
No 4
>>1xew_X SMC protein; structural maintenance of chromosomes, ABC-atpases, condensin, cohesin, cell cycle; 2.00A {Pyrococcus furiosus} (X:1-139)
Probab=60.89 E-value=4.2 Score=21.59 Aligned_cols=17 Identities=35% Similarity=0.610 Sum_probs=14.2
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|-..||||++++||...
T Consensus 33 G~NGsGKStil~Ai~~~ 49 (139)
T 1xew_X 33 GANGSGKSNIGDAILFV 49 (139)
T ss_dssp ECTTSSSHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHH
T ss_conf 98888734398988874
No 5
>>2ywe_A GTP-binding protein LEPA; G domain, beta-barrel, ferredoxin-like domain, structural genomics, NPPSFA; 2.05A {Aquifex aeolicus VF5} PDB: 2ywf_A* 2ywg_A* 2ywh_A* (A:1-187)
Probab=58.85 E-value=11 Score=19.37 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=18.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEE
Q ss_conf 97454450268999987434321012
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALAL 26 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalal 26 (80)
.|-..+|||||++++....-+..-..
T Consensus 12 vG~~n~GKSTL~n~L~~~~~~i~~~~ 37 (187)
T 2ywe_A 12 IAHVDHGKSTLADRLLEYTGAISERE 37 (187)
T ss_dssp ECC--CCHHHHHHHHHHHHTC-----
T ss_pred ECCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 93789898999999999719998576
No 6
>>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A* (A:136-512)
Probab=57.80 E-value=5.2 Score=21.12 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=23.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHCCC
Q ss_conf 9745445026899998743432101238812467610220231
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALALSNDPVSVFLKSDVFDGI 43 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalalsndpvsvflksdvfdgi 43 (80)
+|-|.|||||+|.+|... ++....+-+|.+.-.-+.+.
T Consensus 38 vG~SGsGKSTllr~i~~~-----l~~~~~~G~i~~~g~d~~~~ 75 (377)
T 2ius_A 38 AGTTGSGASVGVNAMILS-----MLYKAQPEDVRFIMIDPKML 75 (377)
T ss_dssp ECCTTSSHHHHHHHHHHH-----HHTTCCTTTEEEEEECCSSS
T ss_pred ECCCCCCHHHHHHHHHHH-----HHHHCCCCCEEEEEECCCCC
T ss_conf 556674288999999999-----99866702015998527653
No 7
>>1ii8_A RAD50 ABC-ATPase; MRE11, DNA double-strand break repair, replication; 3.02A {Pyrococcus furiosus} (A:1-138)
Probab=56.46 E-value=6.4 Score=20.62 Aligned_cols=19 Identities=42% Similarity=0.501 Sum_probs=14.8
Q ss_pred CCCCCCHHHHHHHHH-HHHH
Q ss_conf 745445026899998-7434
Q gi|254781089|r 2 GLSESGKTTLLEAIF-LFGE 20 (80)
Q Consensus 2 glsesgkttlleaif-lfge 20 (80)
|-..+||||+++||. +++.
T Consensus 30 G~Ng~GKStil~Ai~~~l~~ 49 (138)
T 1ii8_A 30 GQNGSGKSSLLDAILVGLYW 49 (138)
T ss_dssp CCTTSSHHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHCCC
T ss_conf 88999831198877886058
No 8
>>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} (A:1-138)
Probab=56.46 E-value=6.4 Score=20.62 Aligned_cols=19 Identities=42% Similarity=0.501 Sum_probs=14.8
Q ss_pred CCCCCCHHHHHHHHH-HHHH
Q ss_conf 745445026899998-7434
Q gi|254781089|r 2 GLSESGKTTLLEAIF-LFGE 20 (80)
Q Consensus 2 glsesgkttlleaif-lfge 20 (80)
|-..+||||+++||. +++.
T Consensus 30 G~Ng~GKStil~Ai~~~l~~ 49 (138)
T 1f2t_A 30 GQNGSGKSSLLDAILVGLYW 49 (138)
T ss_dssp CCTTSSHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHCC
T ss_conf 88988800699999999669
No 9
>>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii} (A:1-231)
Probab=55.71 E-value=5.2 Score=21.13 Aligned_cols=18 Identities=50% Similarity=0.532 Sum_probs=14.9
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|.|-||||||+.+|.-+
T Consensus 35 iG~sGsGKSTll~~i~Gl 52 (231)
T 2it1_A 35 LGPSGSGKSTLLYTIAGI 52 (231)
T ss_dssp ECCTTSSHHHHHHHHHTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999998299999999759
No 10
>>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA ATG; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A* (A:183-574)
Probab=53.88 E-value=6.4 Score=20.63 Aligned_cols=19 Identities=32% Similarity=0.364 Sum_probs=15.6
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q ss_conf 9745445026899998743
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 1 mglsesgkttlleaiflfg 19 (80)
+|-|-|||||++.+|..+-
T Consensus 38 vG~SGsGKSTllr~i~gl~ 56 (392)
T 2iut_A 38 AGTTGSGKSVGVNAMLLSI 56 (392)
T ss_dssp ECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHH
T ss_conf 9468874789999999999
No 11
>>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, ABC ATPase, dimer, kleisin, mitosis, cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} (A:1-156,A:355-430)
Probab=53.49 E-value=7.7 Score=20.21 Aligned_cols=19 Identities=37% Similarity=0.681 Sum_probs=15.0
Q ss_pred CCCCCCHHHHHHHHH-HHHH
Q ss_conf 745445026899998-7434
Q gi|254781089|r 2 GLSESGKTTLLEAIF-LFGE 20 (80)
Q Consensus 2 glsesgkttlleaif-lfge 20 (80)
|-+.|||+|+++||. +++.
T Consensus 33 GpNGsGKSTll~aI~~l~~~ 52 (232)
T 1w1w_A 33 GPNGSGKSNMMDAISFVLGV 52 (232)
T ss_dssp CSTTSSHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHCC
T ss_conf 99999899999999998577
No 12
>>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, non-SMC subunit, ABC-type ATPase, WHD, ATP; HET: ATG; 3.10A {Haemophilus ducreyi} PDB: 3euk_A* (A:1-208,A:411-483)
Probab=52.73 E-value=8 Score=20.10 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=13.6
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7454450268999987
Q gi|254781089|r 2 GLSESGKTTLLEAIFL 17 (80)
Q Consensus 2 glsesgkttlleaifl 17 (80)
|-..+||||+++||.+
T Consensus 36 G~NGsGKSTiL~AI~~ 51 (281)
T 3euj_A 36 GGNGAGKSTTMAGFVT 51 (281)
T ss_dssp CCTTSSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 9999879999999999
No 13
>>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} (A:)
Probab=52.27 E-value=5.9 Score=20.81 Aligned_cols=18 Identities=44% Similarity=0.671 Sum_probs=15.0
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-||||||+.+|.-.
T Consensus 38 iG~sGsGKSTll~~l~gl 55 (262)
T 1b0u_A 38 IGSSGSGKSTFLRCINFL 55 (262)
T ss_dssp ECCTTSSHHHHHHHHTTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999998099999999738
No 14
>>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J* (A:)
Probab=51.64 E-value=6.1 Score=20.73 Aligned_cols=19 Identities=42% Similarity=0.632 Sum_probs=15.3
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q ss_conf 9745445026899998743
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 1 mglsesgkttlleaiflfg 19 (80)
+|.|-||||||+..|..+-
T Consensus 56 iG~sGsGKSTll~~i~gl~ 74 (263)
T 2olj_A 56 IGPSGSGKSTFLRCLNLLE 74 (263)
T ss_dssp ECCTTSSHHHHHHHHTTSS
T ss_pred ECCCCCCHHHHHHHHCCCC
T ss_conf 8799998889999863897
No 15
>>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} (K:1-243)
Probab=49.43 E-value=5 Score=21.18 Aligned_cols=17 Identities=41% Similarity=0.512 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.|-||||||+..|.-
T Consensus 37 iG~sGsGKSTll~~i~G 53 (243)
T 1oxx_K 37 LGPSGAGKTTFMRIIAG 53 (243)
T ss_dssp ECSCHHHHHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHHC
T ss_conf 99999659999999972
No 16
>>1l2t_A Hypothetical ABC transporter ATP-binding protein MJ0796; ABC transporters, ATPase, walker-A, NBD, transport protein; HET: ATP; 1.90A {Methanocaldococcus jannaschii} (A:)
Probab=49.01 E-value=7.1 Score=20.38 Aligned_cols=17 Identities=53% Similarity=0.593 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-|-||||||+..|-.
T Consensus 37 iGpSGsGKSTLl~~i~g 53 (235)
T 1l2t_A 37 MGPSGSGKSTMLNIIGC 53 (235)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 99999819999999965
No 17
>>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} (A:)
Probab=48.55 E-value=8.6 Score=19.94 Aligned_cols=16 Identities=44% Similarity=0.580 Sum_probs=13.4
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7454450268999987
Q gi|254781089|r 2 GLSESGKTTLLEAIFL 17 (80)
Q Consensus 2 glsesgkttlleaifl 17 (80)
|..-|||||+++.+--
T Consensus 13 G~~GsGKTTll~~L~~ 28 (174)
T 1np6_A 13 AWSGTGKTTLLKKLIP 28 (174)
T ss_dssp CCTTSCHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 2599989999999999
No 18
>>1z6g_A Guanylate kinase; structural genomics, SGC, structural genomics consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum 3D7} (A:1-55,A:105-218)
Probab=48.41 E-value=7.4 Score=20.30 Aligned_cols=17 Identities=35% Similarity=0.479 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-|-+|||||+.++.-
T Consensus 29 ~G~sG~GKsTll~~l~g 45 (169)
T 1z6g_A 29 CGPSGVGKGTLIKKLLN 45 (169)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 99999999999999996
No 19
>>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} (A:1-173)
Probab=48.35 E-value=8 Score=20.12 Aligned_cols=16 Identities=31% Similarity=0.615 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+++++
T Consensus 7 iG~~~~GKSSli~~l~ 22 (173)
T 1mky_A 7 VGRPNVGKSTLFNKLV 22 (173)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 8999962999999997
No 20
>>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} (A:94-285)
Probab=48.18 E-value=7.5 Score=20.26 Aligned_cols=18 Identities=33% Similarity=0.573 Sum_probs=14.4
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-|||||++..+--+
T Consensus 13 iGpsGsGKSTll~~l~g~ 30 (192)
T 3dm5_A 13 VGIQGSGKTTTVAKLARY 30 (192)
T ss_dssp ECCTTSSHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHH
T ss_conf 246666640688999999
No 21
>>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} (A:)
Probab=47.83 E-value=7.6 Score=20.22 Aligned_cols=17 Identities=47% Similarity=0.710 Sum_probs=14.4
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-|-|||+||+.+|.-
T Consensus 10 vG~sGsGKsTLl~~l~g 26 (198)
T 1lvg_A 10 SGPSGAGKSTLLKKLFQ 26 (198)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 99999999999999998
No 22
>>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural genomics, PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} (A:)
Probab=47.62 E-value=9.1 Score=19.81 Aligned_cols=33 Identities=27% Similarity=0.168 Sum_probs=19.6
Q ss_pred CCCCCCHHHHHHHHHHH--HHH-HHHEECCCCEEEE
Q ss_conf 74544502689999874--343-2101238812467
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF--GEA-LALALSNDPVSVF 34 (80)
Q Consensus 2 glsesgkttlleaiflf--gea-lalalsndpvsvf 34 (80)
|.+-|||||+++.+-.. .+- -...+.||+-...
T Consensus 11 G~~GsGKTTll~~l~~~l~~~g~kV~vi~~D~~~~~ 46 (169)
T 1xjc_A 11 GYKHSGKTTLXEKWVAAAVREGWRVGTVKHHGHGGE 46 (169)
T ss_dssp CCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC----
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 299998999999999999866995157525775654
No 23
>>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius} (A:1-237)
Probab=46.65 E-value=8.2 Score=20.06 Aligned_cols=18 Identities=50% Similarity=0.571 Sum_probs=14.7
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-||||||+..|.-+
T Consensus 47 iG~sGsGKSTll~~i~Gl 64 (237)
T 1z47_A 47 LGPSGSGKTTILRLIAGL 64 (237)
T ss_dssp ECSTTSSHHHHHHHHHTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999986499999999749
No 24
>>3dhw_C Methionine import ATP-binding protein METN; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12} (C:1-245)
Probab=45.49 E-value=7.7 Score=20.21 Aligned_cols=18 Identities=39% Similarity=0.702 Sum_probs=14.3
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-||||||+..|-.+
T Consensus 37 iG~SGsGKSTLl~~i~gl 54 (245)
T 3dhw_C 37 IGASGAGKSTLIRCVNLL 54 (245)
T ss_dssp EESTTSSHHHHHHHHTTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999998699999999659
No 25
>>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane, nucleotide-binding, periplasm, translation; 2.80A {Escherichia coli K12} PDB: 3deg_C* (D:1-185)
Probab=45.42 E-value=13 Score=18.91 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=17.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 97454450268999987434321
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALA 23 (80)
Q Consensus 1 mglsesgkttlleaiflfgeala 23 (80)
+|...+|||||++++....-+..
T Consensus 10 vG~~n~GKSTL~n~L~~~~~~i~ 32 (185)
T 3cb4_D 10 IAHIDHGKSTLSDRIIQICGGLS 32 (185)
T ss_dssp ECCC----CCHHHHHHHHTTC--
T ss_pred EECCCCCHHHHHHHHHHHHCCCC
T ss_conf 95789998999999999708866
No 26
>>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} (A:1-181)
Probab=45.24 E-value=9.6 Score=19.69 Aligned_cols=17 Identities=35% Similarity=0.569 Sum_probs=14.6
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+..|||||+.++.-
T Consensus 14 iG~~nvGKSSLin~l~~ 30 (181)
T 1ega_A 14 VGRPNVGKSTLLNKLLG 30 (181)
T ss_dssp ECSSSSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 98999829999999958
No 27
>>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* (A:172-364)
Probab=45.05 E-value=9.7 Score=19.67 Aligned_cols=17 Identities=35% Similarity=0.604 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 14 iG~~~vGKSsLln~l~~ 30 (193)
T 2qtf_A 14 VGYTNSGKTSLFNSLTG 30 (193)
T ss_dssp ECBTTSSHHHHHHHHHC
T ss_pred EECCCCHHHHHHHHHHH
T ss_conf 83454014189999775
No 28
>>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} (A:1-47,A:135-236)
Probab=44.87 E-value=9.1 Score=19.80 Aligned_cols=17 Identities=35% Similarity=0.378 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-|-|||+|++.+|.-
T Consensus 22 ~G~sG~GKsTl~~~l~~ 38 (149)
T 1q3t_A 22 DGPASSGKSTVAKIIAK 38 (149)
T ss_dssp ECSSCSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 79997888999999999
No 29
>>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A (A:1-168,A:240-278)
Probab=44.63 E-value=11 Score=19.46 Aligned_cols=24 Identities=38% Similarity=0.733 Sum_probs=18.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 974544502689999874343210
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALAL 24 (80)
Q Consensus 1 mglsesgkttlleaiflfgealal 24 (80)
.|...+|||||++++.....+..-
T Consensus 19 vG~~nsGKSTLl~~Ll~~~~~~~~ 42 (207)
T 2h5e_A 19 ISHPDAGKTTITEKVLLFGQAIQT 42 (207)
T ss_dssp EECTTSSHHHHHHHHHHSCC----
T ss_pred ECCCCCCHHHHHHHHHHHCCCHHH
T ss_conf 968998999999999985671010
No 30
>>2c78_A Elongation factor TU-A; hydrolase, GTPase, translation elongation factor, protein synthesis, antibiotic, GTP-binding, nucleotide-binding; HET: GNP PUL; 1.4A {Thermus thermophilus} (A:1-215)
Probab=44.22 E-value=12 Score=19.11 Aligned_cols=22 Identities=36% Similarity=0.447 Sum_probs=16.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9745445026899998743432
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEAL 22 (80)
Q Consensus 1 mglsesgkttlleaiflfgeal 22 (80)
+|-..+|||||++++.....+.
T Consensus 17 iGHvd~GKTTL~~~ll~~~g~i 38 (215)
T 2c78_A 17 IGHVDHGKTTLTAALTYVAAAE 38 (215)
T ss_dssp ECSTTSSHHHHHHHHHHHHHHS
T ss_pred EECCCCCHHHHHHHHHHHHCCC
T ss_conf 9676873898999998652234
No 31
>>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} (A:174-359)
Probab=43.78 E-value=10 Score=19.52 Aligned_cols=17 Identities=41% Similarity=0.636 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.|+.-
T Consensus 13 iG~~~~GKSSlinal~~ 29 (186)
T 1mky_A 13 VGRPNVGKSTLFNAILN 29 (186)
T ss_dssp ECSTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 89999878999999848
No 32
>>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} (A:1-224)
Probab=43.30 E-value=7.6 Score=20.25 Aligned_cols=17 Identities=41% Similarity=0.503 Sum_probs=14.0
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-|-||||||+.+|.-
T Consensus 32 iG~sGsGKSTLl~~l~G 48 (224)
T 3d31_A 32 LGPTGAGKTLFLELIAG 48 (224)
T ss_dssp ECCCTHHHHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHHC
T ss_conf 99999839999999975
No 33
>>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} (1:1-234)
Probab=43.15 E-value=10 Score=19.60 Aligned_cols=18 Identities=44% Similarity=0.466 Sum_probs=15.0
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-|||+||+..|.-+
T Consensus 35 iG~sGsGKSTll~~i~gl 52 (234)
T 1g29_1 35 LGPSGCGKTTTLRMIAGL 52 (234)
T ss_dssp ECSTTSSHHHHHHHHHTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 989997299999999729
No 34
>>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A (W:96-285)
Probab=42.92 E-value=12 Score=19.19 Aligned_cols=16 Identities=44% Similarity=0.544 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|-+-+||||++.+|-
T Consensus 12 vGpnG~GKSTll~~l~ 27 (190)
T 2j37_W 12 VGLQGSGKTTTCSKLA 27 (190)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCCCCHHHHHH
T ss_conf 3575567532599999
No 35
>>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural genomics, joint center for structural genomics, JCSG; 2.10A {Thermotoga maritima MSB8} (A:1-98,A:164-256)
Probab=42.58 E-value=10 Score=19.52 Aligned_cols=16 Identities=44% Similarity=0.549 Sum_probs=13.6
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-|-+||+||+.+|.
T Consensus 47 vG~nGaGKSTll~~i~ 62 (191)
T 1vpl_A 47 IGPNGAGKTTTLRIIS 62 (191)
T ss_dssp ECCTTSSHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999985999999996
No 36
>>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein LOLD; structural genomics, NPPSFA; 1.70A {Aquifex aeolicus VF5} PDB: 2pcl_A (A:)
Probab=42.47 E-value=9.1 Score=19.81 Aligned_cols=36 Identities=36% Similarity=0.378 Sum_probs=21.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHCCC
Q ss_conf 9745445026899998743432101238812467610220231
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALALSNDPVSVFLKSDVFDGI 43 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalalsndpvsvflksdvfdgi 43 (80)
+|-|-||||||+..|-.. ...+.-++++.....+-.
T Consensus 36 ~G~sGaGKSTLl~~i~gl-------~~p~~G~i~~~g~~i~~~ 71 (224)
T 2pcj_A 36 IGASGSGKSTLLYILGLL-------DAPTEGKVFLEGKEVDYT 71 (224)
T ss_dssp EECTTSCHHHHHHHHTTS-------SCCSEEEEEETTEECCSS
T ss_pred ECCCCCCHHHHHHHHCCC-------CCCCCCEEEECCEECCCC
T ss_conf 889999889999886389-------888846798898864769
No 37
>>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus dsm 4304} PDB: 2oaq_1 (1:261-446)
Probab=42.28 E-value=11 Score=19.41 Aligned_cols=16 Identities=56% Similarity=0.673 Sum_probs=12.8
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7454450268999987
Q gi|254781089|r 2 GLSESGKTTLLEAIFL 17 (80)
Q Consensus 2 glsesgkttlleaifl 17 (80)
|-.-|||||++.|+.-
T Consensus 7 G~tGSGKTTll~aL~~ 22 (186)
T 2oap_1 7 GETASGKTTTLNAIXX 22 (186)
T ss_dssp ESTTSSHHHHHHHHGG
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 3765554899999997
No 38
>>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} (B:1-238)
Probab=41.85 E-value=12 Score=19.14 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=16.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9745445026899998743432
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEAL 22 (80)
Q Consensus 1 mglsesgkttlleaiflfgeal 22 (80)
+|-..+|||||+++++...-++
T Consensus 30 iGHvd~GKTTL~~~Ll~~~g~i 51 (238)
T 1zun_B 30 CGNVDDGKSTLIGRLLHDSKXI 51 (238)
T ss_dssp ECCTTSSHHHHHHHHHHHTTCC
T ss_pred EEECCCCHHHHHHHHHHHCCCC
T ss_conf 9534820899999999877994
No 39
>>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.70A {Thermus thermophilus HB8} PDB: 2d2f_A* (A:)
Probab=41.17 E-value=11 Score=19.34 Aligned_cols=16 Identities=38% Similarity=0.503 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-|-||||||+..|-
T Consensus 35 iGpnGaGKSTLl~~i~ 50 (250)
T 2d2e_A 35 MGPNGAGKSTLGKILA 50 (250)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8899988999999985
No 40
>>3gee_A MNME, tRNA modification GTPase MNME; G protein, cytoplasm, GTP- binding, hydrolase, magnesium, metal-binding, nucleotide- binding, potassium; HET: GDP FON; 2.95A {Chlorobium tepidum} PDB: 3gei_A* (A:223-402)
Probab=41.04 E-value=8 Score=20.12 Aligned_cols=17 Identities=35% Similarity=0.587 Sum_probs=14.4
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 17 iG~~nvGKSSLin~l~~ 33 (180)
T 3gee_A 17 AGKPNAGKSTLLNTLLG 33 (180)
T ss_dssp ECCTTSSHHHHHHHCC-
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 66332106799999837
No 41
>>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, hydrolase; HET: GDP; 1.75A {Pyrococcus abyssi} (A:)
Probab=40.72 E-value=11 Score=19.28 Aligned_cols=18 Identities=39% Similarity=0.460 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-..||||||++++--.
T Consensus 20 ~G~~gaGKTTl~~~Ll~~ 37 (262)
T 1yrb_A 20 VGTAGSGKTTLTGEFGRY 37 (262)
T ss_dssp ECSTTSSHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHH
T ss_conf 938998399999999998
No 42
>>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124} (A:1-230)
Probab=40.65 E-value=12 Score=19.27 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=13.5
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-|-||||||+..|-
T Consensus 40 iG~nGaGKSTLlk~l~ 55 (230)
T 3gfo_A 40 LGGNGVGKSTLFQNFN 55 (230)
T ss_dssp ECCTTSSHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 9999981999999996
No 43
>>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} (A:392-511)
Probab=40.52 E-value=14 Score=18.88 Aligned_cols=15 Identities=13% Similarity=-0.020 Sum_probs=12.4
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
-|||-|||||+-.|.
T Consensus 10 TGlsgsGKsTlA~aL 24 (120)
T 1g8f_A 10 GNSLTVSREQLSIAL 24 (120)
T ss_dssp CTTCCSCHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 279998889999999
No 44
>>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} (A:1-167)
Probab=39.75 E-value=12 Score=19.15 Aligned_cols=16 Identities=31% Similarity=0.561 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 9 iG~~nvGKSSLin~l~ 24 (167)
T 2hjg_A 9 VGRPNVGKSTIFNRIA 24 (167)
T ss_dssp ECSTTSSHHHHHHHHE
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9899998999999986
No 45
>>2qy9_A Cell division protein FTSY; SRP receptor, protein targeting, simibi class GTPase, cell cycle, GTP-binding, inner membrane, membrane; 1.90A {Escherichia coli} (A:93-290)
Probab=39.73 E-value=14 Score=18.77 Aligned_cols=18 Identities=28% Similarity=0.370 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
.|.+-|||||++..+--+
T Consensus 13 vG~nGsGKSTl~~~Lag~ 30 (198)
T 2qy9_A 13 VGVNGVGKTTTIGKLARQ 30 (198)
T ss_dssp ECCTTSCHHHHHHHHHHH
T ss_pred ECCCCCCCCCHHHHHHHH
T ss_conf 413334654048899999
No 46
>>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} (C:92-279)
Probab=39.41 E-value=15 Score=18.64 Aligned_cols=20 Identities=30% Similarity=0.419 Sum_probs=15.5
Q ss_pred CCCCCCCHHHHHHHHHHHHH
Q ss_conf 97454450268999987434
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGE 20 (80)
Q Consensus 1 mglsesgkttlleaiflfge 20 (80)
+|-+-|||||++..+.-+=+
T Consensus 14 vGpnGsGKSTll~~l~~~~~ 33 (188)
T 2v3c_C 14 VGIQGSGKTTTAAKLARYIQ 33 (188)
T ss_dssp ECCSSSSTTHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHH
T ss_conf 12312362078899999999
No 47
>>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, signaling protein; 2.90A {Chlorobaculum tepidum} (A:37-213)
Probab=39.31 E-value=14 Score=18.88 Aligned_cols=16 Identities=38% Similarity=0.650 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 11 ~G~~~vGKTsLi~~l~ 26 (177)
T 3dpu_A 11 IGDGMAGKTSLLKQLI 26 (177)
T ss_dssp ESSSCSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9938987999999996
No 48
>>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 2zzy_A (A:)
Probab=39.24 E-value=14 Score=18.88 Aligned_cols=21 Identities=38% Similarity=0.678 Sum_probs=16.2
Q ss_pred CCCCCCCHHHHHHHHH-HHHHH
Q ss_conf 9745445026899998-74343
Q gi|254781089|r 1 MGLSESGKTTLLEAIF-LFGEA 21 (80)
Q Consensus 1 mglsesgkttlleaif-lfgea 21 (80)
+|-|-|||+||+.++. .+.+.
T Consensus 7 vGpsGsGKsTL~~~L~~~~~~~ 28 (186)
T 3a00_A 7 SGPSGTGKSTLLKKLFAEYPDS 28 (186)
T ss_dssp ESSSSSSHHHHHHHHHHHCGGG
T ss_pred ECCCCCCHHHHHHHHHHHCCCC
T ss_conf 8999999899999999748856
No 49
>>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics, NPPSFA; HET: GDP; 1.96A {Thermus thermophilus HB8} (A:)
Probab=39.12 E-value=13 Score=18.90 Aligned_cols=17 Identities=24% Similarity=0.552 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 7 vG~~~vGKSSLin~l~~ 23 (161)
T 2dyk_A 7 VGRPNVGKSSLFNRLLK 23 (161)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 99999849999999978
No 50
>>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} (A:)
Probab=39.06 E-value=15 Score=18.68 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=13.4
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+..++.
T Consensus 10 ~G~~GsGKsTla~~La 25 (173)
T 1kag_A 10 VGPMGAGKSTIGRQLA 25 (173)
T ss_dssp ECCTTSCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999998899999999
No 51
>>2awn_A Maltose/maltodextrin import ATP-binding protein MALK; ATP-binding cassette, transport protein; HET: ADP; 2.30A {Escherichia coli K12} (A:1-236)
Probab=39.02 E-value=14 Score=18.89 Aligned_cols=17 Identities=47% Similarity=0.514 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-|-+|||||+..+.-
T Consensus 35 iG~nGaGKSTLl~~l~G 51 (236)
T 2awn_A 35 VGPSGCGKSTLLRMIAG 51 (236)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHHC
T ss_conf 99999839999999975
No 52
>>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} (A:69-265)
Probab=38.68 E-value=12 Score=19.14 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=14.3
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+||+||+.++.
T Consensus 7 vG~~~~GKSsLin~l~ 22 (197)
T 1tq4_A 7 TGETGSGKSSFINTLR 22 (197)
T ss_dssp EECTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 7899986899999995
No 53
>>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron transport, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae} (A:1-241)
Probab=38.35 E-value=12 Score=19.10 Aligned_cols=18 Identities=50% Similarity=0.671 Sum_probs=15.0
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|.|-+|||||+..|.-+
T Consensus 36 iG~sGaGKSTll~~i~Gl 53 (241)
T 3fvq_A 36 IGASGCGKTTLLRCLAGF 53 (241)
T ss_dssp EESTTSSHHHHHHHHHTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999998499999999739
No 54
>>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} (A:347-572)
Probab=38.18 E-value=13 Score=18.94 Aligned_cols=18 Identities=28% Similarity=0.362 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-+-+|||||+..|--.
T Consensus 42 iG~NGaGKSTllk~i~Gl 59 (226)
T 3bk7_A 42 VGPNGIGKTTFVKMLAGV 59 (226)
T ss_dssp ECCTTSSHHHHHHHHHTS
T ss_pred ECCCCCCCCCHHHHHCCC
T ss_conf 778776555043564288
No 55
>>2ccj_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, ATP-binding; HET: TMP; 1.7A {Staphylococcus aureus} PDB: 2cck_A 2ccg_A* (A:)
Probab=38.09 E-value=13 Score=18.93 Aligned_cols=16 Identities=38% Similarity=0.675 Sum_probs=13.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+-|||||+.+.+-
T Consensus 8 ~G~~GsGKTTla~~L~ 23 (205)
T 2ccj_A 8 EGPEGSGKTTVINEVY 23 (205)
T ss_dssp ECCTTSCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8998885999999999
No 56
>>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} (A:)
Probab=38.00 E-value=13 Score=18.91 Aligned_cols=16 Identities=44% Similarity=0.569 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-+-+|||||+..|-
T Consensus 6 iGpnGaGKSTLlk~i~ 21 (178)
T 1ye8_A 6 TGEPGVGKTTLVKKIV 21 (178)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 9999808999999998
No 57
>>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} (A:)
Probab=37.90 E-value=16 Score=18.53 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=12.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+.+++-
T Consensus 9 ~G~~GsGKtTla~~L~ 24 (192)
T 1kht_A 9 TGVPGVGSTTSSQLAM 24 (192)
T ss_dssp ECCTTSCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999969899999999
No 58
>>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae} (C:1-214)
Probab=37.47 E-value=14 Score=18.82 Aligned_cols=17 Identities=35% Similarity=0.622 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|-+-||||||+..|.-
T Consensus 37 iG~nGsGKSTLlk~l~G 53 (214)
T 2nq2_C 37 LGQNGCGKSTLLDLLLG 53 (214)
T ss_dssp ECCSSSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 85899989999999956
No 59
>>1wf3_A GTP-binding protein; GTPase, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus HB8} (A:1-179)
Probab=37.42 E-value=15 Score=18.68 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 13 vG~~nvGKSsLin~l~ 28 (179)
T 1wf3_A 13 VGKPNVGKSTLLNNLL 28 (179)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9799987999999996
No 60
>>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli} (7:1-289)
Probab=37.02 E-value=16 Score=18.57 Aligned_cols=24 Identities=25% Similarity=0.285 Sum_probs=18.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHE
Q ss_conf 745445026899998743432101
Q gi|254781089|r 2 GLSESGKTTLLEAIFLFGEALALA 25 (80)
Q Consensus 2 glsesgkttlleaiflfgealala 25 (80)
|-..+|||||.|++.....+..-.
T Consensus 17 GHvd~GKTTL~e~ll~~~g~i~~~ 40 (289)
T 2rdo_7 17 AHIDAGKTTTTERILFYTGVNHKI 40 (289)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 289999899999999962997645
No 61
>>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase; 2.10A {Mycobacterium tuberculosis} (A:1-50,A:103-207)
Probab=36.95 E-value=14 Score=18.77 Aligned_cols=18 Identities=28% Similarity=0.298 Sum_probs=14.6
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-+|||||+..+--+
T Consensus 26 ~GpsG~GKsTll~~~~gl 43 (155)
T 1znw_A 26 SGPSAVGKSTVVRCLRER 43 (155)
T ss_dssp ECSTTSSHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHH
T ss_conf 898999999999999956
No 62
>>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae} (A:)
Probab=36.75 E-value=15 Score=18.58 Aligned_cols=17 Identities=41% Similarity=0.524 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 54 vG~~~vGKTsLl~~l~~ 70 (193)
T 2ged_A 54 AGPQNSGKTSLLTLLTT 70 (193)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 89899974889999863
No 63
>>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus} (A:369-546)
Probab=36.71 E-value=14 Score=18.74 Aligned_cols=16 Identities=38% Similarity=0.567 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|++-|||||+..++-
T Consensus 10 ~G~~GsGKSTia~~La 25 (178)
T 2gks_A 10 TGLPCAGKSTIAEILA 25 (178)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 3455882759999999
No 64
>>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide kinase; HET: NAD; 2.90A {Haemophilus influenzae} (A:162-365)
Probab=36.61 E-value=15 Score=18.69 Aligned_cols=16 Identities=31% Similarity=0.536 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+.+++-
T Consensus 15 ~G~~GsGKtTla~~La 30 (204)
T 1lw7_A 15 LGGESSGKSVLVNKLA 30 (204)
T ss_dssp ECCTTSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8278788799999999
No 65
>>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} (A:1-239)
Probab=36.54 E-value=15 Score=18.71 Aligned_cols=18 Identities=44% Similarity=0.466 Sum_probs=14.7
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-||||||+..|.-+
T Consensus 43 iGpsGaGKSTll~~i~gl 60 (239)
T 1v43_A 43 LGPSGCGKTTTLRMIAGL 60 (239)
T ss_dssp ECCTTSSHHHHHHHHHTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999998599999999749
No 66
>>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell membrane, GTP-binding, ION transport; 2.50A {Legionella pneumophila} (A:1-169,A:253-256)
Probab=36.07 E-value=14 Score=18.79 Aligned_cols=17 Identities=41% Similarity=0.573 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-+..|||||+.++.-
T Consensus 7 iG~~~vGKTsL~~~l~~ 23 (173)
T 3iby_A 7 IGNPNCGKTTLFNALTN 23 (173)
T ss_dssp EESTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 89999689999999948
No 67
>>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A* (A:)
Probab=35.97 E-value=15 Score=18.64 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=13.5
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+..+.
T Consensus 27 vG~~~vGKTsll~~l~ 42 (190)
T 3con_A 27 VGAGGVGKSALTIQLI 42 (190)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9969929899999997
No 68
>>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A (A:1-173)
Probab=35.70 E-value=15 Score=18.60 Aligned_cols=16 Identities=38% Similarity=0.592 Sum_probs=14.0
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+..|||||+.++.
T Consensus 11 iG~~~vGKTsLi~~l~ 26 (173)
T 3a1s_A 11 AGCPNVGKTSLFNALT 26 (173)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999998999999995
No 69
>>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis 1330} (A:144-361)
Probab=35.36 E-value=17 Score=18.30 Aligned_cols=18 Identities=44% Similarity=0.488 Sum_probs=13.8
Q ss_pred CCCCCCHHHHHHHHHHHH
Q ss_conf 745445026899998743
Q gi|254781089|r 2 GLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 2 glsesgkttlleaiflfg 19 (80)
|-..|||||++.|+.-+-
T Consensus 39 G~tgSGKTT~l~aL~~~~ 56 (218)
T 2gza_A 39 GETGSGKTTLMKALMQEI 56 (218)
T ss_dssp ESSSSCHHHHHHHHHTTS
T ss_pred ECCCCCHHHHHHHHHHHH
T ss_conf 079886689999999764
No 70
>>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii OT3} (A:)
Probab=35.01 E-value=15 Score=18.62 Aligned_cols=17 Identities=35% Similarity=0.380 Sum_probs=14.4
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 7 iG~~naGKSSL~n~L~~ 23 (190)
T 2cxx_A 7 AGRSNVGKSTLIYRLTG 23 (190)
T ss_dssp EEBTTSSHHHHHHHHHS
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 89999889999999958
No 71
>>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori 26695} PDB: 1zui_A* (A:)
Probab=34.92 E-value=19 Score=18.09 Aligned_cols=15 Identities=33% Similarity=0.694 Sum_probs=12.4
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+...+
T Consensus 13 ~G~~GsGKtT~a~~L 27 (168)
T 1zuh_A 13 IGFMGSGKSSLAQEL 27 (168)
T ss_dssp ESCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 999999899999999
No 72
>>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} (A:)
Probab=34.80 E-value=19 Score=18.11 Aligned_cols=15 Identities=40% Similarity=0.372 Sum_probs=13.0
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 745445026899998
Q gi|254781089|r 2 GLSESGKTTLLEAIF 16 (80)
Q Consensus 2 glsesgkttlleaif 16 (80)
|.|-|||||+..++-
T Consensus 9 G~~GsGKTTla~~L~ 23 (206)
T 1jjv_A 9 GGIGSGKTTIANLFT 23 (206)
T ss_dssp CSTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 988777999999999
No 73
>>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure 2 function project, S2F, unknown function; 2.00A {Escherichia coli} (A:1-204)
Probab=34.80 E-value=17 Score=18.43 Aligned_cols=17 Identities=47% Similarity=0.555 Sum_probs=13.5
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|...|||||++..+.-.
T Consensus 11 GflGsGKTTll~~l~~~ 27 (204)
T 1nij_A 11 GFLGAGKTTLLRHILNE 27 (204)
T ss_dssp ESSSSSCHHHHHHHHHS
T ss_pred ECCCCCHHHHHHHHHHC
T ss_conf 18789999999999837
No 74
>>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens} (A:)
Probab=34.74 E-value=15 Score=18.64 Aligned_cols=18 Identities=33% Similarity=0.519 Sum_probs=14.4
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-|||+||+.++.-+
T Consensus 37 vG~sGsGKSTLl~~l~g~ 54 (237)
T 2cbz_A 37 VGQVGCGKSSLLSALLAE 54 (237)
T ss_dssp ECSTTSSHHHHHHHHTTC
T ss_pred ECCCCCCHHHHHHHHHHH
T ss_conf 999999999999999852
No 75
>>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} (A:)
Probab=34.63 E-value=15 Score=18.64 Aligned_cols=16 Identities=25% Similarity=0.279 Sum_probs=13.2
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7454450268999987
Q gi|254781089|r 2 GLSESGKTTLLEAIFL 17 (80)
Q Consensus 2 glsesgkttlleaifl 17 (80)
|.|-|||||+-.++-.
T Consensus 12 G~sGSGKTTla~~L~~ 27 (290)
T 1a7j_A 12 GSSGAGTSTVKHTFDQ 27 (290)
T ss_dssp SCC---CCTHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 9987819999999999
No 76
>>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} (A:1-276)
Probab=34.42 E-value=17 Score=18.42 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=14.3
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-+-||||||+.+|.=
T Consensus 53 iGpNGsGKSTLlk~I~G 69 (276)
T 1yqt_A 53 VGPNGTGKSTAVKILAG 69 (276)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHHC
T ss_conf 99999559999999977
No 77
>>1rkb_A Protein AD-004, protein CGI-137; five-stranded parallel beta-sheet flanked by 7 alpha- helices, transferase; 2.00A {Homo sapiens} (A:)
Probab=34.32 E-value=20 Score=18.03 Aligned_cols=15 Identities=40% Similarity=0.483 Sum_probs=12.4
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+-.++
T Consensus 10 ~G~~GsGKtTla~~L 24 (173)
T 1rkb_A 10 TGTPGVGKTTLGKEL 24 (173)
T ss_dssp ECSTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 889999989999999
No 78
>>2yz2_A Putative ABC transporter ATP-binding protein TM_0222; cobalt transport, hydrolase, inner membrane, membrane, nucleotide- binding; 2.30A {Thermotoga maritima MSB8} (A:)
Probab=34.26 E-value=17 Score=18.40 Aligned_cols=16 Identities=44% Similarity=0.611 Sum_probs=13.6
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+-+|||||+.+|.
T Consensus 39 iG~nGaGKSTLlk~i~ 54 (266)
T 2yz2_A 39 AGNTGSGKSTLLQIVA 54 (266)
T ss_dssp ECSTTSSHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999986999999996
No 79
>>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* (A:)
Probab=34.19 E-value=20 Score=18.01 Aligned_cols=16 Identities=50% Similarity=0.574 Sum_probs=13.0
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+.+++-
T Consensus 10 ~G~~GsGKsTl~~~La 25 (204)
T 2v54_A 10 EGLDKSGKTTQCMNIM 25 (204)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8998887999999999
No 80
>>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* (A:)
Probab=34.18 E-value=20 Score=18.02 Aligned_cols=17 Identities=29% Similarity=0.390 Sum_probs=13.7
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|.+-|||||+.+.+.-
T Consensus 6 ~G~~GsGKtTla~~L~~ 22 (205)
T 2jaq_A 6 FGTVGAGKSTISAEISK 22 (205)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 88988889999999999
No 81
>>2hyd_A ABC transporter homolog; transport protein; HET: ADP; 3.00A {Staphylococcus aureus} (A:329-424,A:496-578)
Probab=34.09 E-value=7.8 Score=20.18 Aligned_cols=18 Identities=44% Similarity=0.706 Sum_probs=14.0
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|.||||||+..+.-+
T Consensus 45 vG~sGsGKSTl~~ll~gl 62 (179)
T 2hyd_A 45 VGMSGGGKSTLINLIPRF 62 (179)
T ss_dssp ECSTTSSHHHHHTTTTTS
T ss_pred ECCCCCCHHHHHHHHHCC
T ss_conf 899997499999998552
No 82
>>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str} (A:)
Probab=33.75 E-value=17 Score=18.33 Aligned_cols=18 Identities=33% Similarity=0.691 Sum_probs=14.7
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|.|-||||||+.+|.-+
T Consensus 52 vG~sGsGKSTL~~~l~gl 69 (260)
T 2ghi_A 52 VGHTGSGKSTIAKLLYRF 69 (260)
T ss_dssp ECSTTSSHHHHHHHHTTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 989998099999997323
No 83
>>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} (A:)
Probab=33.67 E-value=16 Score=18.44 Aligned_cols=17 Identities=24% Similarity=0.515 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.+++-
T Consensus 29 iG~~~vGKSSL~n~l~~ 45 (195)
T 1svi_A 29 AGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEBTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 99999879999999719
No 84
>>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Aeropyrum pernix K1} (A:)
Probab=33.62 E-value=20 Score=17.93 Aligned_cols=15 Identities=47% Similarity=0.636 Sum_probs=12.7
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 745445026899998
Q gi|254781089|r 2 GLSESGKTTLLEAIF 16 (80)
Q Consensus 2 glsesgkttlleaif 16 (80)
|.+-|||||+..++-
T Consensus 20 G~~GsGKTT~a~~La 34 (186)
T 2yvu_A 20 GLPGSGKTTIATRLA 34 (186)
T ss_dssp CCTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 999999999999999
No 85
>>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} (A:1-92,A:171-257)
Probab=33.35 E-value=18 Score=18.28 Aligned_cols=16 Identities=44% Similarity=0.677 Sum_probs=13.5
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-+-+|||||+..|.
T Consensus 39 iG~nGaGKSTll~~i~ 54 (179)
T 1g6h_A 39 IGPNGSGKSTLINVIT 54 (179)
T ss_dssp ECSTTSSHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8689999999999996
No 86
>>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, structural genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} (A:1-61,A:124-208)
Probab=33.22 E-value=21 Score=17.84 Aligned_cols=55 Identities=25% Similarity=0.394 Sum_probs=27.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHH------CCCC--------CCCEEEEEEEEEEEEEE
Q ss_conf 9745445026899998743432101238812467610220------2311--------34302576678751112
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALALSNDPVSVFLKSDVF------DGIS--------KNQYGFFTGKIKVDAQF 61 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalalsndpvsvflksdvf------dgis--------knqygfftgkikvdaqf 61 (80)
.|.+-|||||+..++-. .|.-.+-+|.+ +..|.| +|+- +.-..+|-=+|-+|+.+
T Consensus 28 ~G~~GsGKTT~~~~La~-----~l~~~G~~v~~-~~~D~~~~viIvEG~ylL~~~~~w~~l~~l~D~~ifid~~~ 96 (146)
T 3c8u_A 28 SGAPGSGKSTLSNPLAA-----ALSAQGLPAEV-VPXDGFCRVAIIEGNYLLFDAPGWRDLTAIWDVSIRLEVPX 96 (146)
T ss_dssp ECCTTSCTHHHHHHHHH-----HHHHTTCCEEE-EESGGGCCEEEEEESSTTBCSTTGGGGGGTCSEEEEECCCH
T ss_pred ECCCCCCHHHHHHHHHH-----HHHHCCCCCEE-ECCCEECCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCH
T ss_conf 89899989999999999-----96021455403-12440555551454432036421122233341345884899
No 87
>>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii} (A:)
Probab=33.17 E-value=18 Score=18.25 Aligned_cols=16 Identities=31% Similarity=0.603 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 13 iG~~~vGKSsLi~~l~ 28 (188)
T 2wjg_A 13 IGNPNVGKSTIFNALT 28 (188)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999987999999996
No 88
>>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii} (A:)
Probab=33.00 E-value=18 Score=18.23 Aligned_cols=16 Identities=63% Similarity=0.754 Sum_probs=12.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-+-+|||||+.+|.
T Consensus 36 iGpNGaGKSTLlk~i~ 51 (263)
T 2pjz_A 36 LGPNGSGKTTLLRAIS 51 (263)
T ss_dssp ECCTTSSHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 9999982999999996
No 89
>>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A* (A:)
Probab=32.99 E-value=21 Score=17.85 Aligned_cols=16 Identities=31% Similarity=0.528 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+.+.+-
T Consensus 6 ~G~~GsGKsTla~~L~ 21 (197)
T 2z0h_A 6 EGIDGSGKSTQIQLLA 21 (197)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8998799999999999
No 90
>>1ii2_A Phosphoenolpyruvate carboxykinase; phosphate binding loop, lyase; 2.00A {Trypanosoma cruzi} (A:199-240,A:326-524)
Probab=32.93 E-value=16 Score=18.56 Aligned_cols=38 Identities=42% Similarity=0.630 Sum_probs=23.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEE-EEEHHHH---CCCCC
Q ss_conf 974544502689999874343210123881246-7610220---23113
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALALSNDPVSV-FLKSDVF---DGISK 45 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalalsndpvsv-flksdvf---dgisk 45 (80)
.|||-.|||||-. .-.-.|-.||..+ ||-.|-| --|||
T Consensus 21 fglsgtgkttls~-------d~~r~ligdP~~IifLt~Da~GVLPPVsK 62 (241)
T 1ii2_A 21 FGLSGTGKTTLSA-------DPHRNLIGDPKNVIFLTNDAFGVMPPVAR 62 (241)
T ss_dssp ECCTTSSHHHHHC-------CTTSEEEESEEEEEEEECCTTSCSCSEEE
T ss_pred ECCCCCCCCCCCC-------CCCCCEECCCCEEEEEEECCCCCCCCHHH
T ss_conf 5246678863322-------69987677886799996046578772320
No 91
>>1sgw_A Putative ABC transporter; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Pyrococcus furiosus dsm 3638} (A:1-88,A:151-214)
Probab=32.92 E-value=18 Score=18.21 Aligned_cols=18 Identities=44% Similarity=0.573 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
.|-|-||||||+..|.-+
T Consensus 41 vGpnGsGKSTllk~i~gl 58 (152)
T 1sgw_A 41 HGPNGIGKTTLLKTISTY 58 (152)
T ss_dssp ECCTTSSHHHHHHHHTTS
T ss_pred ECCCCCCHHHHHHHHHCC
T ss_conf 999997299999999663
No 92
>>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} (A:)
Probab=32.86 E-value=25 Score=17.43 Aligned_cols=16 Identities=31% Similarity=0.430 Sum_probs=13.4
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7454450268999987
Q gi|254781089|r 2 GLSESGKTTLLEAIFL 17 (80)
Q Consensus 2 glsesgkttlleaifl 17 (80)
|-..|||||++.++.-
T Consensus 32 GptGsGKTTll~al~~ 47 (261)
T 2eyu_A 32 GPTGSGKSTTIASXID 47 (261)
T ss_dssp CSTTCSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 9999979999999999
No 93
>>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} (B:)
Probab=32.73 E-value=20 Score=18.03 Aligned_cols=16 Identities=44% Similarity=0.584 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 18 iG~~~vGKSSLi~~l~ 33 (218)
T 1nrj_B 18 AGPQNSGKTSLLTLLT 33 (218)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999999999999996
No 94
>>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein transport; HET: ADP; 2.80A {Aquifex aeolicus VF5} PDB: 2eww_A* 2gsz_A* (A:125-372)
Probab=32.69 E-value=26 Score=17.39 Aligned_cols=37 Identities=22% Similarity=0.427 Sum_probs=21.1
Q ss_pred CCCCCCHHHHHHHHHHH--HH-HHHHEECCCCEEEEEEHH
Q ss_conf 74544502689999874--34-321012388124676102
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF--GE-ALALALSNDPVSVFLKSD 38 (80)
Q Consensus 2 glsesgkttlleaiflf--ge-alalalsndpvsvflksd 38 (80)
|-..|||||++.++.-+ .. ........||+-..+...
T Consensus 19 GptGsGKTtll~al~~~~~~~~~~~ii~~Ed~~E~~~~~~ 58 (248)
T 2ewv_A 19 GPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHK 58 (248)
T ss_dssp CSSSSSHHHHHHHHHHHHHHHSCCEEEEEESSCCSCCCCS
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
T ss_conf 6887773019999999876034544110378876545687
No 95
>>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* (A:27-244)
Probab=32.69 E-value=22 Score=17.80 Aligned_cols=17 Identities=29% Similarity=0.446 Sum_probs=13.7
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.||+-|||||+-.++--
T Consensus 15 ~GlpGsGKST~A~~L~~ 31 (218)
T 2axn_A 15 VGLPARGKTYISKKLTR 31 (218)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 89999988999999999
No 96
>>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} (A:)
Probab=32.63 E-value=22 Score=17.77 Aligned_cols=15 Identities=27% Similarity=0.377 Sum_probs=12.4
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|++-|||||+...+
T Consensus 8 ~G~~GsGKsT~a~~L 22 (173)
T 1e6c_A 8 VGARGCGMTTVGREL 22 (173)
T ss_dssp ESCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999889999999
No 97
>>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* (A:)
Probab=32.60 E-value=22 Score=17.79 Aligned_cols=15 Identities=53% Similarity=0.671 Sum_probs=12.7
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+..++
T Consensus 11 ~G~~GsGKTTla~~L 25 (179)
T 2pez_A 11 TGLSGAGKTTVSMAL 25 (179)
T ss_dssp ECCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 999999999999999
No 98
>>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A* (A:)
Probab=32.57 E-value=16 Score=18.47 Aligned_cols=17 Identities=41% Similarity=0.509 Sum_probs=13.5
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-+-||||||+..|.-
T Consensus 70 iG~nGsGKSTLlk~l~G 86 (290)
T 2bbs_A 70 AGSTGAGKTSLLMMIMG 86 (290)
T ss_dssp EESTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 99998709999999955
No 99
>>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, ATP-binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus VF5} (A:)
Probab=32.52 E-value=19 Score=18.17 Aligned_cols=16 Identities=38% Similarity=0.625 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+-|||||+.+++-
T Consensus 6 ~G~~GsGKSTla~~L~ 21 (195)
T 2pbr_A 6 EGIDGSGKTTQAKKLY 21 (195)
T ss_dssp ECSTTSCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8998899999999999
No 100
>>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome assembly, GTP-binding; HET: GNP; 1.90A {Aquifex aeolicus} (A:1-190,A:295-308)
Probab=32.39 E-value=20 Score=17.98 Aligned_cols=16 Identities=38% Similarity=0.700 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 16 iG~~~~GKSSLin~l~ 31 (204)
T 3iev_A 16 VGKPNVGKSTLLNNLL 31 (204)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999986999999994
No 101
>>1j3b_A ATP-dependent phosphoenolpyruvate carboxykinase; adenosine triphosphate, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus HB8} (A:217-252,A:339-360,A:418-483)
Probab=32.37 E-value=14 Score=18.78 Aligned_cols=36 Identities=39% Similarity=0.508 Sum_probs=19.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHCCC
Q ss_conf 9745445026899998743432101238812467610220231
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALALSNDPVSVFLKSDVFDGI 43 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalalsndpvsvflksdvfdgi 43 (80)
.|||-.|||||-. .-.-.|-.||-.+..+..++-.+
T Consensus 15 FGLSGTGKTTLSa-------Dp~R~LIGD~~~~p~~p~~ya~l 50 (124)
T 1j3b_A 15 FGLSGTGKTTLST-------DPERPLIGDPRAIFFLSADAYGV 50 (124)
T ss_dssp EECTTSCHHHHTC-------BTTBCEEESEEEEEEEECCTTSC
T ss_pred EECCCCCCCEECC-------CCCCCCCCCCCEEEEEECCCCCC
T ss_conf 7227887615233-------79997357874179996466677
No 102
>>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} (A:)
Probab=32.23 E-value=20 Score=18.04 Aligned_cols=15 Identities=60% Similarity=0.749 Sum_probs=12.5
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 745445026899998
Q gi|254781089|r 2 GLSESGKTTLLEAIF 16 (80)
Q Consensus 2 glsesgkttlleaif 16 (80)
|.+-|||||+...+.
T Consensus 29 G~~GsGKtTla~~L~ 43 (201)
T 1rz3_A 29 GLSRSGKTTLANQLS 43 (201)
T ss_dssp ECTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 987379999999999
No 103
>>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} (A:1-114)
Probab=32.19 E-value=22 Score=17.73 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=13.1
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|++.|||||+-.++--
T Consensus 8 ~G~pGsGKTT~a~~l~~ 24 (114)
T 1ltq_A 8 IGCPGSGKSTWAREFIA 24 (114)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 89999978999999998
No 104
>>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP binding protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens} (A:)
Probab=32.13 E-value=20 Score=17.94 Aligned_cols=16 Identities=31% Similarity=0.383 Sum_probs=13.7
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||+|+..+.
T Consensus 10 iG~~~~GKTSLi~~l~ 25 (175)
T 2nzj_A 10 LGDPGVGKTSLASLFA 25 (175)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9979959999999996
No 105
>>2pze_A Cystic fibrosis transmembrane conductance regulator; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A (A:)
Probab=32.11 E-value=18 Score=18.27 Aligned_cols=17 Identities=41% Similarity=0.509 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-+-+|||||+..|.=
T Consensus 40 iG~nGaGKSTLlk~l~G 56 (229)
T 2pze_A 40 AGSTGAGKTSLLMMIMG 56 (229)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHHC
T ss_conf 99998879999999955
No 106
>>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP; HET: ADP; 1.70A {Leishmania major strain friedlin} (A:)
Probab=32.10 E-value=22 Score=17.72 Aligned_cols=15 Identities=40% Similarity=0.625 Sum_probs=12.7
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|++-|||||+..++
T Consensus 16 ~G~~GsGKSTla~~L 30 (184)
T 1y63_A 16 TGTPGTGKTSMAEMI 30 (184)
T ss_dssp ECSTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 829999989999999
No 107
>>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei} (A:1-190)
Probab=32.03 E-value=11 Score=19.47 Aligned_cols=17 Identities=29% Similarity=0.446 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-..||||||++++--
T Consensus 27 iG~~~~GKTTL~~~~~~ 43 (190)
T 2elf_A 27 IGTEKSGRTSLAANLGK 43 (190)
T ss_dssp EESTTSSHHHHHHTTSE
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 94578798999999985
No 108
>>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A* (A:)
Probab=31.98 E-value=17 Score=18.38 Aligned_cols=17 Identities=47% Similarity=0.591 Sum_probs=14.3
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 44 iG~~n~GKSTLin~L~~ 60 (226)
T 2hf9_A 44 MGAIGSGKTLLIEKLID 60 (226)
T ss_dssp EESTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 88999889999999999
No 109
>>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A (C:)
Probab=31.78 E-value=19 Score=18.05 Aligned_cols=17 Identities=41% Similarity=0.458 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-+-+|||||+.+|.=
T Consensus 52 iG~nGaGKSTLlk~i~G 68 (267)
T 2zu0_C 52 MGPNGSGKSTLSATLAG 68 (267)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 96899999999999846
No 110
>>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} (A:)
Probab=31.68 E-value=20 Score=18.04 Aligned_cols=23 Identities=30% Similarity=0.375 Sum_probs=17.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 97454450268999987434321
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALA 23 (80)
Q Consensus 1 mglsesgkttlleaiflfgeala 23 (80)
+|-+-|||+||+..|.-+-+..+
T Consensus 34 vG~sGsGKSTLl~ll~g~~~p~~ 56 (243)
T 1mv5_A 34 AGPSGGGKSTIFSLLERFYQPTA 56 (243)
T ss_dssp ECCTTSSHHHHHHHHTTSSCCSB
T ss_pred ECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 99999819999999966877896
No 111
>>3h0k_A UPF0200 protein SSO1041; adenylate, kinase, structural genomics, PSI-2, protein structure initiative; 3.25A {Sulfolobus solfataricus} (A:)
Probab=31.63 E-value=26 Score=17.39 Aligned_cols=18 Identities=22% Similarity=0.300 Sum_probs=14.3
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
.|.+-|||||+..++--.
T Consensus 6 ~G~~GsGKsT~a~~L~~~ 23 (178)
T 3h0k_A 6 TGMPGSGKSEFAKLLKER 23 (178)
T ss_dssp ECCTTSCHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHC
T ss_conf 899999999999999987
No 112
>>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural genomics, NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii str} (A:)
Probab=31.62 E-value=23 Score=17.65 Aligned_cols=17 Identities=24% Similarity=0.266 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|.+-|||||+.+.+--
T Consensus 10 ~G~~GsGKtTla~~L~~ 26 (213)
T 2plr_A 10 EGIDGSGKSSQATLLKD 26 (213)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 89998749999999999
No 113
>>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} (A:)
Probab=31.55 E-value=21 Score=17.86 Aligned_cols=17 Identities=24% Similarity=0.372 Sum_probs=14.0
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||+|+..+.-
T Consensus 10 iG~~~vGKTSLi~~l~~ 26 (168)
T 1u8z_A 10 VGSGGVGKSALTLQFMY 26 (168)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 99899588999999972
No 114
>>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus} (A:1-44,A:95-171)
Probab=31.53 E-value=14 Score=18.85 Aligned_cols=16 Identities=50% Similarity=0.812 Sum_probs=12.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|++-+||||+.++.-
T Consensus 8 ~G~~G~GKTT~~~~l~ 23 (121)
T 2f1r_A 8 VGTSDSGKTTLITRMM 23 (121)
T ss_dssp EESCHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8889953999999998
No 115
>>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} (A:277-489)
Probab=31.50 E-value=21 Score=17.85 Aligned_cols=22 Identities=27% Similarity=0.335 Sum_probs=16.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9745445026899998743432
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEAL 22 (80)
Q Consensus 1 mglsesgkttlleaiflfgeal 22 (80)
+|-+-+|||||+..|.=+-...
T Consensus 42 iG~NGaGKSTllk~i~Gl~~p~ 63 (213)
T 1yqt_A 42 VGPNGIGKTTFVKXLAGVEEPT 63 (213)
T ss_dssp ECCTTSSHHHHHHHHHTSSCCS
T ss_pred ECCCCCCCCHHHHHHCCCCCCC
T ss_conf 5257863422457754986257
No 116
>>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} (A:)
Probab=31.37 E-value=23 Score=17.62 Aligned_cols=15 Identities=33% Similarity=0.441 Sum_probs=12.4
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+.+.+
T Consensus 21 ~G~~GsGKtTla~~L 35 (203)
T 1ukz_A 21 LGGPGAGKGTQCEKL 35 (203)
T ss_dssp ECSTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999879999999
No 117
>>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} (A:)
Probab=31.17 E-value=24 Score=17.59 Aligned_cols=16 Identities=38% Similarity=0.621 Sum_probs=13.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+.+.+.
T Consensus 14 ~G~~GsGKSTla~~La 29 (175)
T 1knq_A 14 MGVSGSGKSAVASEVA 29 (175)
T ss_dssp ECSTTSCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999989899999999
No 118
>>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis} (A:168-353)
Probab=31.06 E-value=22 Score=17.79 Aligned_cols=16 Identities=31% Similarity=0.648 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 14 iG~~~vGKSsLin~l~ 29 (186)
T 2hjg_A 14 IGRPNVGKSSLVNAXL 29 (186)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHC
T ss_conf 8799988899888761
No 119
>>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens} (B:)
Probab=30.97 E-value=21 Score=17.86 Aligned_cols=16 Identities=38% Similarity=0.430 Sum_probs=13.0
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+..++-
T Consensus 17 ~G~~GsGKsT~a~~La 32 (202)
T 3ch4_B 17 SGKRKSGKDFVTEALQ 32 (202)
T ss_dssp EECTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8989989999999999
No 120
>>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} (A:1-114)
Probab=30.62 E-value=25 Score=17.51 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=12.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|++-|||||+-..+-
T Consensus 8 ~G~pGsGKTT~a~~L~ 23 (114)
T 1ly1_A 8 IGCPGSGKSTWAREFI 23 (114)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8989999899999999
No 121
>>3hdt_A Putative kinase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940} (A:)
Probab=30.61 E-value=22 Score=17.81 Aligned_cols=15 Identities=13% Similarity=-0.017 Sum_probs=12.7
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 745445026899998
Q gi|254781089|r 2 GLSESGKTTLLEAIF 16 (80)
Q Consensus 2 glsesgkttlleaif 16 (80)
|.+-|||||+..++-
T Consensus 21 G~~GsGKSTla~~L~ 35 (223)
T 3hdt_A 21 REYGSGGRIVGKKLA 35 (223)
T ss_dssp ECTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 899899799999999
No 122
>>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell membrane, GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* (A:1-172,A:259-274)
Probab=30.46 E-value=20 Score=18.00 Aligned_cols=16 Identities=44% Similarity=0.661 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 9 vG~~~vGKSTLin~l~ 24 (188)
T 3i8s_A 9 IGNPNSGKTTLFNQLT 24 (188)
T ss_dssp EECTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9899997999999996
No 123
>>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} (A:)
Probab=30.43 E-value=25 Score=17.48 Aligned_cols=15 Identities=27% Similarity=0.302 Sum_probs=12.7
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 745445026899998
Q gi|254781089|r 2 GLSESGKTTLLEAIF 16 (80)
Q Consensus 2 glsesgkttlleaif 16 (80)
|.+-|||||+..++-
T Consensus 11 G~~GsGKtTla~~La 25 (186)
T 3cm0_A 11 GPPGAGKGTQASRLA 25 (186)
T ss_dssp CCTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 899998799999999
No 124
>>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} (A:147-418)
Probab=30.39 E-value=30 Score=17.08 Aligned_cols=17 Identities=41% Similarity=0.303 Sum_probs=13.7
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|-..|||||++.++.-+
T Consensus 28 G~tGsGKTtl~~al~~~ 44 (272)
T 1p9r_A 28 GPTGSGKSTTLYAGLQE 44 (272)
T ss_dssp CSTTSCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHH
T ss_conf 78988642689987546
No 125
>>1xzp_A Probable tRNA modification GTPase TRME; GTP-binding, THF-binding, hydrolase; 2.30A {Thermotoga maritima} (A:243-411)
Probab=30.27 E-value=13 Score=19.01 Aligned_cols=17 Identities=35% Similarity=0.595 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 7 vG~~~vGKSsLi~~l~~ 23 (169)
T 1xzp_A 7 VGKPNVGKSTLLNRLLN 23 (169)
T ss_dssp ECCHHHHTCHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHH
T ss_conf 75656406899999973
No 126
>>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} (A:)
Probab=30.23 E-value=25 Score=17.45 Aligned_cols=38 Identities=26% Similarity=0.276 Sum_probs=22.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHCCCCC
Q ss_conf 974544502689999874343210123881246761022023113
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALALSNDPVSVFLKSDVFDGISK 45 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalalsndpvsvflksdvfdgisk 45 (80)
.|-|-||||||+..|.-+ +..+.-++++...-...++.
T Consensus 41 vG~sGsGKSTL~~ll~gl-------~~p~~G~I~~~g~di~~~~~ 78 (247)
T 2ff7_A 41 VGRSGSGKSTLTKLIQRF-------YIPENGQVLIDGHDLALADP 78 (247)
T ss_dssp ECSTTSSHHHHHHHHTTS-------SCCSEEEEEETTEETTTSCH
T ss_pred ECCCCCHHHHHHHHHHCC-------CCCCCCEEEECCEECHHHCH
T ss_conf 999998699999999632-------47888999999999502133
No 127
>>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} (A:)
Probab=29.98 E-value=23 Score=17.69 Aligned_cols=16 Identities=38% Similarity=0.640 Sum_probs=13.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+.+.+-
T Consensus 11 ~G~~GsGKsTla~~L~ 26 (216)
T 3tmk_A 11 EGLDRTGKTTQCNILY 26 (216)
T ss_dssp EECSSSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8998887999999999
No 128
>>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} (A:)
Probab=29.90 E-value=21 Score=17.92 Aligned_cols=16 Identities=38% Similarity=0.640 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+..|||||+.++.
T Consensus 10 iG~~~vGKSsLin~l~ 25 (172)
T 2gj8_A 10 AGRPNAGKSSLLNALA 25 (172)
T ss_dssp EESTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999998999999996
No 129
>>2p67_A LAO/AO transport system kinase; ARGK, structural genomics, PSI-2, protein structure initiative; 1.80A {Escherichia coli K12} (A:1-265)
Probab=29.89 E-value=19 Score=18.08 Aligned_cols=18 Identities=39% Similarity=0.589 Sum_probs=14.6
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|...+|||||+.++.-.
T Consensus 62 vG~~~aGKSTLln~L~~~ 79 (265)
T 2p67_A 62 TGTPGAGKSTFLEAFGML 79 (265)
T ss_dssp EECTTSCHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHH
T ss_conf 489999899999999999
No 130
>>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus} (A:1-249)
Probab=29.83 E-value=22 Score=17.77 Aligned_cols=17 Identities=47% Similarity=0.647 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|.+-+|||||+..|.-
T Consensus 53 iG~NGaGKSTLlk~i~G 69 (249)
T 2ihy_A 53 YGLNGAGKTTLLNILNA 69 (249)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 98999839999999965
No 131
>>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} (A:1-228)
Probab=29.78 E-value=24 Score=17.60 Aligned_cols=17 Identities=35% Similarity=0.509 Sum_probs=13.7
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-|-||||||+..+.-
T Consensus 30 lGpnGsGKSTll~~l~G 46 (228)
T 2onk_A 30 LGPTGAGKSVFLELIAG 46 (228)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHHC
T ss_conf 97999819999999973
No 132
>>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural genomics, NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii OT3} (A:163-357)
Probab=29.70 E-value=22 Score=17.75 Aligned_cols=16 Identities=44% Similarity=0.632 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 11 vG~~~~GKSsLin~l~ 26 (195)
T 2e87_A 11 AGHPNVGKSTLLKALT 26 (195)
T ss_dssp ECSTTSSHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 6178845628999984
No 133
>>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* (A:)
Probab=29.62 E-value=23 Score=17.66 Aligned_cols=17 Identities=41% Similarity=0.554 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|.+-|||||+..++--
T Consensus 27 ~G~~GsGKtTla~~L~~ 43 (207)
T 2qt1_A 27 SGVTNSGKTTLAKNLQK 43 (207)
T ss_dssp EESTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 99998769999999999
No 134
>>1zo1_I IF2, translation initiation factor 2; E. coli, ribosome, initiation of protein synthesis, cryo-eletron microscopy, translation/RNA complex; 13.80A {Escherichia coli} (I:1-170)
Probab=29.52 E-value=21 Score=17.89 Aligned_cols=19 Identities=47% Similarity=0.511 Sum_probs=15.0
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q ss_conf 9745445026899998743
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 1 mglsesgkttlleaiflfg 19 (80)
+|-+.+|||||++++..-.
T Consensus 10 iG~~n~GKSTL~~~l~~~~ 28 (170)
T 1zo1_I 10 MGHVDHGKTSLLEYIRSTK 28 (170)
T ss_dssp EESTTSSSHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHCC
T ss_conf 9489989879999997417
No 135
>>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} (A:)
Probab=29.48 E-value=21 Score=17.84 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=12.5
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+...+
T Consensus 7 ~G~~GsGKTT~a~~L 21 (194)
T 1nks_A 7 TGIPGVGKSTVLAKV 21 (194)
T ss_dssp EECTTSCHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899996989999999
No 136
>>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} (A:)
Probab=29.46 E-value=22 Score=17.72 Aligned_cols=16 Identities=19% Similarity=0.455 Sum_probs=13.5
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+..+.
T Consensus 9 iG~~~vGKTsLl~~l~ 24 (170)
T 1ek0_A 9 LGEAAVGKSSIVLRFV 24 (170)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9989919899999997
No 137
>>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B* (C:115-314)
Probab=29.44 E-value=27 Score=17.33 Aligned_cols=18 Identities=33% Similarity=0.547 Sum_probs=14.0
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
.|-+-|||||++.++-.+
T Consensus 21 vGp~GaGKTTli~~L~~~ 38 (200)
T 3e70_C 21 VGFNGSGKTTTIAKLANW 38 (200)
T ss_dssp ECCTTSSHHHHHHHHHHH
T ss_pred ECCCCCCCCCHHHHHHHH
T ss_conf 668778754308999999
No 138
>>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} (A:)
Probab=29.33 E-value=23 Score=17.70 Aligned_cols=16 Identities=31% Similarity=0.362 Sum_probs=12.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+.+.+-
T Consensus 9 ~G~~GsGKsTla~~La 24 (196)
T 1tev_A 9 LGGPGAGKGTQCARIV 24 (196)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999999899999999
No 139
>>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolase/protein binding complex; 2.40A {Helicobacter pylori 26695} (A:139-330)
Probab=29.29 E-value=21 Score=17.83 Aligned_cols=17 Identities=47% Similarity=0.683 Sum_probs=13.1
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|-..|||||++.++.-+
T Consensus 40 G~tGsGKTTll~al~~~ 56 (192)
T 2pt7_A 40 GGTGSGKTTYIKSIMEF 56 (192)
T ss_dssp ESTTSCHHHHHHHGGGG
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 50379827888998764
No 140
>>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} (A:1-221,A:270-352)
Probab=29.24 E-value=27 Score=17.25 Aligned_cols=19 Identities=21% Similarity=0.378 Sum_probs=15.1
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q ss_conf 9745445026899998743
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 1 mglsesgkttlleaiflfg 19 (80)
+|-..+|||||++++....
T Consensus 25 iGHvd~GKTTL~~~Ll~~~ 43 (304)
T 1n0u_A 25 IAHVDHGKSTLTDSLVQRA 43 (304)
T ss_dssp ECCGGGTHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHC
T ss_conf 8589999899999999964
No 141
>>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} (A:332-428,A:499-582)
Probab=29.16 E-value=20 Score=17.97 Aligned_cols=19 Identities=42% Similarity=0.468 Sum_probs=14.8
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q ss_conf 9745445026899998743
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 1 mglsesgkttlleaiflfg 19 (80)
.|-|-|||+||+..+.-+-
T Consensus 44 vG~sGsGKSTll~~l~gl~ 62 (181)
T 3b60_A 44 VGRSGSGKSTIASLITRFY 62 (181)
T ss_dssp EECTTSSHHHHHHHHTTTT
T ss_pred ECCCCCCHHHHHHHHHCCC
T ss_conf 8999987999999981776
No 142
>>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* (A:1-70,A:135-245)
Probab=28.81 E-value=51 Score=15.83 Aligned_cols=58 Identities=29% Similarity=0.365 Sum_probs=29.4
Q ss_pred CCCCCCCHHHHHHHHHH-HHH-------HHHHEECCCCEEEEEEHHHHCCCCCC----CEEEEEEEEEEEEEE
Q ss_conf 97454450268999987-434-------32101238812467610220231134----302576678751112
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL-FGE-------ALALALSNDPVSVFLKSDVFDGISKN----QYGFFTGKIKVDAQF 61 (80)
Q Consensus 1 mglsesgkttlleaifl-fge-------alalalsndpvsvflksdvfdgiskn----qygfftgkikvdaqf 61 (80)
.|-+-|||||+-+.|-- +|. ....++|-|-.. ..=+.||+.-- -..++.-+|-+|...
T Consensus 31 ~G~~gsGKsT~a~~l~~~~~~~~~~~~~~~~~~~~~d~~~---diiIiEG~y~l~~~~l~~~~D~~Ifld~p~ 100 (181)
T 2jeo_A 31 SGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFY---DVVLFEGILVFYSQEIRDMFHLRLFVDTDS 100 (181)
T ss_dssp ECSTTSSHHHHHHHHHHHHTGGGSCGGGCSEEEEEGGGGB---SEEEEECTTTTTSHHHHTTCSEEEEEECCH
T ss_pred ECCCCCCHHHHHHHHHHHHCCCEECCCCCEEEEECCCCCC---CCCCCCCHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 8998664999999999996857226786058997277410---211001123201222222222333334659
No 143
>>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} (A:)
Probab=28.72 E-value=28 Score=17.23 Aligned_cols=15 Identities=27% Similarity=0.372 Sum_probs=12.5
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+.+.+
T Consensus 26 ~G~~GsGKsTla~~L 40 (201)
T 2cdn_A 26 LGPPGAGKGTQAVKL 40 (201)
T ss_dssp ECCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999989999999
No 144
>>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus halodurans c-125} (A:)
Probab=28.66 E-value=28 Score=17.22 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=12.1
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+.+.+
T Consensus 8 ~G~~GsGKTT~a~~L 22 (189)
T 2bdt_A 8 TGPAGVGKSTTCKRL 22 (189)
T ss_dssp ECSTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899998989999999
No 145
>>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae} (A:324-582)
Probab=28.53 E-value=29 Score=17.16 Aligned_cols=22 Identities=32% Similarity=0.351 Sum_probs=16.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9745445026899998743432
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEAL 22 (80)
Q Consensus 1 mglsesgkttlleaiflfgeal 22 (80)
.|-|-|||+||+..|.-+-+..
T Consensus 52 vG~sGsGKSTLl~~l~gl~~~~ 73 (259)
T 3b5x_A 52 VGRSGSGKSTIANLFTRFYDVD 73 (259)
T ss_pred ECCCCCCHHHHHHHHHCCCCCC
T ss_conf 9999986999999986346467
No 146
>>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A (A:97-299)
Probab=28.45 E-value=31 Score=17.00 Aligned_cols=17 Identities=35% Similarity=0.493 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|++-+||||+...+.-
T Consensus 15 ~G~~G~GKTTla~kl~~ 31 (203)
T 1zu4_A 15 VGVNGTGKTTSLAKMAN 31 (203)
T ss_dssp ESSTTSSHHHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHH
T ss_conf 05301353037889999
No 147
>>1lnz_A SPO0B-associated GTP-binding protein; GTPase, OBG, stringent factor, stress response, sporulation, large G-protein, structural genomics, PSI; HET: G4P; 2.60A {Bacillus subtilis} (A:159-342)
Probab=28.40 E-value=18 Score=18.27 Aligned_cols=17 Identities=35% Similarity=0.591 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+|||||+.++.-
T Consensus 6 iG~~nvGKSSLin~l~~ 22 (184)
T 1lnz_A 6 VGFPSVGKSTLLSVVSS 22 (184)
T ss_dssp ESSTTSSHHHHHHHSEE
T ss_pred EEECCCCCCHHHHHHHC
T ss_conf 98668984489999858
No 148
>>1nn5_A Similar to deoxythymidylate kinase (thymidylate kinase); P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} (A:)
Probab=28.26 E-value=25 Score=17.46 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=13.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+...+-
T Consensus 15 ~G~~GsGKST~a~~La 30 (215)
T 1nn5_A 15 EGVDRAGKSTQSRKLV 30 (215)
T ss_dssp EESTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8998888999999999
No 149
>>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis; 2.10A {Aquifex aeolicus} (A:)
Probab=28.12 E-value=29 Score=17.12 Aligned_cols=15 Identities=33% Similarity=0.518 Sum_probs=12.0
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+-.++
T Consensus 6 ~G~~GsGKTTla~~L 20 (168)
T 2pt5_A 6 IGFXCSGKSTVGSLL 20 (168)
T ss_dssp ESCTTSCHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 889999889999999
No 150
>>1p6x_A Thymidine kinase; P-loop, LID, transferase; HET: THM; 2.00A {Equid herpesvirus 4} (A:)
Probab=28.11 E-value=29 Score=17.14 Aligned_cols=15 Identities=27% Similarity=0.284 Sum_probs=12.5
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 745445026899998
Q gi|254781089|r 2 GLSESGKTTLLEAIF 16 (80)
Q Consensus 2 glsesgkttlleaif 16 (80)
|.+-|||||+.+.+-
T Consensus 14 G~~GsGKTTl~~~L~ 28 (334)
T 1p6x_A 14 GVYGIGKSTTGRVMA 28 (334)
T ss_dssp CSTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 887788999999999
No 151
>>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) class, TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima MSB8} (A:1-225)
Probab=28.04 E-value=25 Score=17.51 Aligned_cols=18 Identities=39% Similarity=0.366 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-|-|||+|++..|.=+
T Consensus 35 iG~sGaGKSTll~~i~Gl 52 (225)
T 2yyz_A 35 LGPSGCGKTTTLLMLAGI 52 (225)
T ss_dssp ECSTTSSHHHHHHHHHTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999998599999999759
No 152
>>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} (A:)
Probab=27.56 E-value=25 Score=17.43 Aligned_cols=16 Identities=50% Similarity=0.644 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+-+|||||+..|.
T Consensus 38 iG~nGaGKSTll~~i~ 53 (240)
T 1ji0_A 38 IGANGAGKTTTLSAIA 53 (240)
T ss_dssp ECSTTSSHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9899985999999997
No 153
>>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} (A:1-169)
Probab=27.18 E-value=31 Score=17.00 Aligned_cols=16 Identities=38% Similarity=0.553 Sum_probs=12.6
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+-.++-
T Consensus 8 ~G~~GsGKtTiA~~La 23 (169)
T 2iyv_A 8 VGLPGSGKSTIGRRLA 23 (169)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8899998899999999
No 154
>>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus} (A:58-294)
Probab=27.10 E-value=25 Score=17.48 Aligned_cols=16 Identities=25% Similarity=0.563 Sum_probs=13.4
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-..+||+||+.++.
T Consensus 14 vG~~~~GKSTLlNaLl 29 (237)
T 2qpt_A 14 AGQYSTGKTSFIQYLL 29 (237)
T ss_dssp EEBTTSCHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 8999981999999997
No 155
>>1qzx_A SRP54, signal recognition 54 kDa protein; signal recognition particle, protein targeting, signaling protein; 4.00A {Sulfolobus solfataricus} (A:98-290)
Probab=26.85 E-value=30 Score=17.05 Aligned_cols=16 Identities=38% Similarity=0.451 Sum_probs=13.1
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 7454450268999987
Q gi|254781089|r 2 GLSESGKTTLLEAIFL 17 (80)
Q Consensus 2 glsesgkttlleaifl 17 (80)
|..-|||||++.++-.
T Consensus 14 G~~GsGKTT~~~~L~~ 29 (193)
T 1qzx_A 14 GVQGSGKTTTAGKLAY 29 (193)
T ss_dssp CSSSSSTTTHHHHHHH
T ss_pred CCCCCCCCCHHHHHHH
T ss_conf 5778884204999999
No 156
>>2dpx_A GTP-binding protein RAD; GTPase, small-G, RGK, signal transduction, diabetes, signaling protein; HET: GDP; 1.80A {Homo sapiens} PDB: 2gjs_A* (A:)
Probab=26.84 E-value=29 Score=17.16 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=13.4
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+..+.
T Consensus 13 iG~~~~GKTsli~~l~ 28 (174)
T 2dpx_A 13 LGAPGVGKSALARIFG 28 (174)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9979939899999994
No 157
>>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* (A:1019-1284)
Probab=26.76 E-value=32 Score=16.93 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=15.4
Q ss_pred CCCCCCCHHHHHHHHHHHHH
Q ss_conf 97454450268999987434
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGE 20 (80)
Q Consensus 1 mglsesgkttlleaiflfge 20 (80)
.|-|.||||||+..|.-+-+
T Consensus 47 vG~sGsGKSTLl~ll~gl~~ 66 (266)
T 3g5u_A 47 VGSSGCGKSTVVQLLERFYD 66 (266)
T ss_dssp ECSSSTTHHHHHHHHTTSSC
T ss_pred ECCCCCCHHHHHHHHHCCCC
T ss_conf 89999849999999956860
No 158
>>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} (A:)
Probab=26.70 E-value=25 Score=17.44 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.6
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+||+||+.+++-
T Consensus 45 ~G~~g~GKSSLin~l~~ 61 (270)
T 1h65_A 45 XGKGGVGKSSTVNSIIG 61 (270)
T ss_dssp EESTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 89999989999999848
No 159
>>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Bos taurus} (C:1-77,C:203-402)
Probab=26.67 E-value=24 Score=17.60 Aligned_cols=17 Identities=35% Similarity=0.704 Sum_probs=12.7
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|-.||||+|++..+=+
T Consensus 46 lg~~~sgkst~~kq~~~ 62 (277)
T 1azs_C 46 LGAGESGKSTIVKQMRI 62 (277)
T ss_dssp EESTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 57997779999999999
No 160
>>1g7s_A Translation initiation factor IF2/EIF5B; translational GTPase; HET: GDP; 2.00A {Methanothermobacterthermautotrophicus} (A:5-221)
Probab=26.58 E-value=32 Score=16.90 Aligned_cols=18 Identities=44% Similarity=0.506 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
.|-..+||+||++++.--
T Consensus 7 iG~~naGKSTL~naLl~~ 24 (217)
T 1g7s_A 7 LGHVDHGKTTLLDHIRGS 24 (217)
T ss_dssp ECSTTSSHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHC
T ss_conf 968998599999999703
No 161
>>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* (C:)
Probab=26.45 E-value=27 Score=17.26 Aligned_cols=16 Identities=38% Similarity=0.542 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-+-||||||+..|-
T Consensus 32 iGpNGaGKSTll~~i~ 47 (249)
T 2qi9_C 32 VGPNGAGKSTLLARXA 47 (249)
T ss_dssp ECCTTSSHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999981999999994
No 162
>>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens} (A:)
Probab=26.37 E-value=28 Score=17.23 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=13.4
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+..+.
T Consensus 34 ~G~~~vGKTsli~~l~ 49 (199)
T 2p5s_A 34 AGDAAVGKSSFLMRLC 49 (199)
T ss_dssp ESSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999979999999995
No 163
>>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} (A:)
Probab=26.15 E-value=28 Score=17.21 Aligned_cols=16 Identities=25% Similarity=0.486 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+..+-
T Consensus 13 vG~~~vGKTsll~~l~ 28 (177)
T 1wms_A 13 LGDGGVGKSSLMNRYV 28 (177)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9989989999999998
No 164
>>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} (A:)
Probab=26.07 E-value=28 Score=17.22 Aligned_cols=15 Identities=27% Similarity=0.242 Sum_probs=12.6
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+.+++
T Consensus 11 ~G~~GsGKTTia~~L 25 (183)
T 2vli_A 11 NGPFGVGKTHTAHTL 25 (183)
T ss_dssp ECCC----CHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899991499999999
No 165
>>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein structure initiative; 3.20A {Agrobacterium tumefaciens str} (A:)
Probab=25.60 E-value=30 Score=17.05 Aligned_cols=15 Identities=47% Similarity=0.632 Sum_probs=12.4
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 745445026899998
Q gi|254781089|r 2 GLSESGKTTLLEAIF 16 (80)
Q Consensus 2 glsesgkttlleaif 16 (80)
|.+-|||||+..++-
T Consensus 16 G~pGsGKTTla~~La 30 (191)
T 1zp6_A 16 GHPGSGKSTIAEALA 30 (191)
T ss_dssp ECTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
T ss_conf 999988899999999
No 166
>>1wxq_A GTP-binding protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii OT3} (A:1-119,A:215-316)
Probab=25.37 E-value=30 Score=17.01 Aligned_cols=17 Identities=35% Similarity=0.546 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|.+.+||+||+.++.-
T Consensus 6 iG~~NaGKSTLlnaL~~ 22 (221)
T 1wxq_A 6 VGKPNVGKSTFFSAATL 22 (221)
T ss_dssp EECTTSSHHHHHHHHHC
T ss_pred ECCCCCCHHHHHHHHHC
T ss_conf 89999989999999978
No 167
>>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} (A:)
Probab=25.35 E-value=38 Score=16.51 Aligned_cols=17 Identities=35% Similarity=0.358 Sum_probs=13.7
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|-+-+||||++.+|.-.
T Consensus 8 G~~G~GKTTl~~~l~~~ 24 (189)
T 2i3b_A 8 GPPGVGKTTLIHKASEV 24 (189)
T ss_dssp SCCSSCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH
T ss_conf 89998099999999999
No 168
>>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A* (A:)
Probab=24.89 E-value=30 Score=17.02 Aligned_cols=16 Identities=31% Similarity=0.603 Sum_probs=13.5
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 9 iG~~~vGKStLi~~l~ 24 (165)
T 2wji_A 9 IGNPNVGKSTIFNALT 24 (165)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9899998999999997
No 169
>>1dar_A EF-G, elongation factor G; ribosomal translocase, translational GTPase; HET: GDP; 2.40A {Thermus thermophilus HB8} (A:1-283)
Probab=24.63 E-value=30 Score=17.04 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=15.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q ss_conf 745445026899998743432
Q gi|254781089|r 2 GLSESGKTTLLEAIFLFGEAL 22 (80)
Q Consensus 2 glsesgkttlleaiflfgeal 22 (80)
|-..+|||||.+++.....+.
T Consensus 19 Ghvd~GKTTL~~~Ll~~~g~i 39 (283)
T 1dar_A 19 AHIDAGKTTTTERILYYTGRI 39 (283)
T ss_dssp ECTTSCHHHHHHHHHHHHCC-
T ss_pred ECCCCCHHHHHHHHHHHCCCC
T ss_conf 189999899999999963998
No 170
>>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A* (A:)
Probab=24.42 E-value=37 Score=16.56 Aligned_cols=17 Identities=35% Similarity=0.432 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|.+.+|||||+..+.-
T Consensus 12 iG~~~vGKSsll~~~~~ 28 (178)
T 2hxs_A 12 LGDGASGKTSLTTCFAQ 28 (178)
T ss_dssp ECCTTSSHHHHHHHHHG
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 99599399999999982
No 171
>>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} (A:1-312)
Probab=24.40 E-value=26 Score=17.38 Aligned_cols=17 Identities=29% Similarity=0.491 Sum_probs=14.2
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+.+||+||+.+++-
T Consensus 44 vG~~~~GKSsLiN~L~g 60 (312)
T 1f5n_A 44 VGLYRTGKSYLMNKLAG 60 (312)
T ss_dssp EEBTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHCC
T ss_conf 78999979999999739
No 172
>>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone; HET: MSE; 1.70A {Methylobacterium extorquens AM1} (A:)
Probab=24.40 E-value=31 Score=16.94 Aligned_cols=18 Identities=28% Similarity=0.451 Sum_probs=14.8
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|...+|||||+.++.-.
T Consensus 61 vG~pnaGKSTLln~L~~~ 78 (337)
T 2qm8_A 61 TGVPGVGKSTTIDALGSL 78 (337)
T ss_dssp ECCTTSCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHH
T ss_conf 289998899999999999
No 173
>>2rgx_A Adenylate kinase; transferase(phosphotransferase), ATP-binding, cytoplasm, nucleotide-binding; HET: AP5; 1.90A {Aquifex aeolicus} PDB: 2rh5_A (A:1-112,A:171-206)
Probab=24.19 E-value=32 Score=16.90 Aligned_cols=15 Identities=27% Similarity=0.437 Sum_probs=12.4
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
+|.+-|||||+-.++
T Consensus 6 ~G~pGSGKTTlAk~L 20 (148)
T 2rgx_A 6 LGPPGAGKGTQAKRL 20 (148)
T ss_dssp ECCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999879999999
No 174
>>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* (A:374-660)
Probab=24.14 E-value=30 Score=17.03 Aligned_cols=18 Identities=28% Similarity=0.394 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
.|-|-||||||+.+|.-+
T Consensus 49 vG~sGsGKSTll~ll~gl 66 (287)
T 3g5u_A 49 VGNSGCGKSTTVQLMQRL 66 (287)
T ss_dssp ECCSSSSHHHHHHHTTTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 389851478999986345
No 175
>>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A* (A:)
Probab=23.97 E-value=31 Score=17.00 Aligned_cols=16 Identities=19% Similarity=0.522 Sum_probs=13.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+||+||+.+++
T Consensus 42 vG~~~~GKSSLin~L~ 57 (262)
T 3def_A 42 LGKGGVGKSSTVNSLI 57 (262)
T ss_dssp EECTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999987999999995
No 176
>>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling protein; HET: GDP; 2.00A {Mus musculus} (A:1-63,A:188-362)
Probab=23.91 E-value=33 Score=16.85 Aligned_cols=17 Identities=41% Similarity=0.731 Sum_probs=12.6
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
.|-.||||+|++.-+-+
T Consensus 39 lg~~esgkst~~kq~~~ 55 (238)
T 1zcb_A 39 LGAGESGKSTFLKQMRI 55 (238)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 77997649999999999
No 177
>>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus} (A:1-34,A:119-219)
Probab=23.74 E-value=33 Score=16.82 Aligned_cols=16 Identities=25% Similarity=0.424 Sum_probs=13.4
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-+-|||+|+...+-
T Consensus 9 ~G~~g~GKst~~~~la 24 (135)
T 2h92_A 9 DGPAAAGKSTIAKRVA 24 (135)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 7898678899999999
No 178
>>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A (A:1-205,A:290-316)
Probab=23.74 E-value=33 Score=16.83 Aligned_cols=16 Identities=44% Similarity=0.520 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-|-|||||+...+.
T Consensus 16 ~GpSGsGKttla~~La 31 (232)
T 3foz_A 16 MGPTASGKTALAIELR 31 (232)
T ss_dssp ECCTTSCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8988327999999999
No 179
>>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleotide binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} (A:)
Probab=23.52 E-value=40 Score=16.41 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=12.7
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+...+-
T Consensus 9 ~G~~GsGKtTla~~La 24 (178)
T 1qhx_A 9 NGGSSAGKSGIVRCLQ 24 (178)
T ss_dssp ECCTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999999899999999
No 180
>>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 2.07A {Thermus thermophilus HB8} (A:158-334)
Probab=23.47 E-value=33 Score=16.81 Aligned_cols=16 Identities=38% Similarity=0.711 Sum_probs=13.7
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-+..|||||+.++.
T Consensus 6 iG~~~vGKSsL~n~l~ 21 (177)
T 1udx_A 6 VGYPNAGKSSLLAAMT 21 (177)
T ss_dssp ECCGGGCHHHHHHHHC
T ss_pred EEECCCCCHHHHHHHC
T ss_conf 9726788565998741
No 181
>>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A* (A:)
Probab=23.44 E-value=32 Score=16.91 Aligned_cols=16 Identities=44% Similarity=0.889 Sum_probs=13.6
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||+|+..+.
T Consensus 26 vG~~~vGKTsLi~~~~ 41 (196)
T 3llu_A 26 MGLRRSGKSSIQKVVF 41 (196)
T ss_dssp EESTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9989999999999997
No 182
>>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase; HET: GNP; 1.50A {Rattus norvegicus} (A:1-58,A:180-353)
Probab=23.43 E-value=40 Score=16.40 Aligned_cols=18 Identities=33% Similarity=0.682 Sum_probs=12.8
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
.|-.||||+|++.-+-+.
T Consensus 38 lg~~esgkst~~kq~~~~ 55 (232)
T 1cip_A 38 LGAGESGKSTIVKQMKII 55 (232)
T ss_dssp ECSTTSSHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHH
T ss_conf 668975189999999998
No 183
>>1yj5_A 5' polynucleotide kinase-3' phosphatase catalytic domain; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} (A:205-366)
Probab=23.42 E-value=40 Score=16.39 Aligned_cols=15 Identities=27% Similarity=0.645 Sum_probs=12.3
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|++-|||||+-.++
T Consensus 27 ~G~pGsGKST~a~~L 41 (162)
T 1yj5_A 27 VGFPGAGKSTFIQEH 41 (162)
T ss_dssp ECCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 568998677999987
No 184
>>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} (A:1-38,A:88-207)
Probab=23.31 E-value=43 Score=16.21 Aligned_cols=44 Identities=23% Similarity=0.292 Sum_probs=27.3
Q ss_pred CCCCCCHHHHHHHHHHHH--------HHHHHEE---------------------CCCCEEEEEEHHHHCCCCC
Q ss_conf 745445026899998743--------4321012---------------------3881246761022023113
Q gi|254781089|r 2 GLSESGKTTLLEAIFLFG--------EALALAL---------------------SNDPVSVFLKSDVFDGISK 45 (80)
Q Consensus 2 glsesgkttlleaiflfg--------ealalal---------------------sndpvsvflksdvfdgisk 45 (80)
|-|-+||+|++..|..+- ++..-++ .-+|++||++..-.+.+..
T Consensus 13 g~~g~gk~t~~~~~~~~~~~~~~~~~~~I~~~l~~Gk~vIldvd~qg~~~lk~~~~~pi~IfI~pps~~~L~~ 85 (158)
T 2j41_A 13 GPSGVGKGTVRKRIFEDPSTSYKYSIQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRE 85 (158)
T ss_dssp CSTTSCHHHHHHHHHHCTTCCEECCCHHHHHHHHTTCEEEEECCGGGHHHHHHHCTTSEEEEEECCC------
T ss_pred CCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHH
T ss_conf 9899999999999984697562354688999996699478646431488998757981899986363899998
No 185
>>2rhm_A Putative kinase; ZP_00765535.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Chloroflexus aurantiacus j-10-fl} (A:)
Probab=23.28 E-value=35 Score=16.67 Aligned_cols=14 Identities=50% Similarity=0.719 Sum_probs=11.8
Q ss_pred CCCCCCHHHHHHHH
Q ss_conf 74544502689999
Q gi|254781089|r 2 GLSESGKTTLLEAI 15 (80)
Q Consensus 2 glsesgkttlleai 15 (80)
|.+-|||||+..++
T Consensus 12 G~~GsGKsT~a~~L 25 (193)
T 2rhm_A 12 GHPATGKTTLSQAL 25 (193)
T ss_dssp ESTTSSHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
T ss_conf 78999999999999
No 186
>>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} (A:392-573)
Probab=23.13 E-value=41 Score=16.35 Aligned_cols=16 Identities=31% Similarity=0.474 Sum_probs=12.7
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
.|.+-|||||+-.++-
T Consensus 11 ~G~~GsGKsTla~~La 26 (182)
T 1m8p_A 11 TGYMNSGKDAIARALQ 26 (182)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 6789988759999999
No 187
>>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,; 1.75A {Escherichia coli} (A:1-37,A:122-227)
Probab=23.11 E-value=35 Score=16.72 Aligned_cols=15 Identities=47% Similarity=0.525 Sum_probs=12.6
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
+|.+-|||||+-+++
T Consensus 11 ~g~~g~gk~~~~~~~ 25 (143)
T 1cke_A 11 DGPSGAGKGTLCKAM 25 (143)
T ss_dssp ECCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 799988889999999
No 188
>>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, ATP-binding; 2.15A {Ehrlichia chaffeensis} (A:)
Probab=22.97 E-value=41 Score=16.32 Aligned_cols=19 Identities=32% Similarity=0.317 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q ss_conf 9745445026899998743
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 1 mglsesgkttlleaiflfg 19 (80)
.|-+-|||||+.+.+--..
T Consensus 27 ~G~~GsGKST~~~~L~~~l 45 (223)
T 3ld9_A 27 EGIDGSGKTTQSHLLAEYL 45 (223)
T ss_dssp ECSTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHH
T ss_conf 8998899999999999998
No 189
>>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A* (A:)
Probab=22.92 E-value=35 Score=16.69 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=14.1
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 974544502689999874
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLF 18 (80)
Q Consensus 1 mglsesgkttlleaiflf 18 (80)
+|-+-|||+||+.++.-+
T Consensus 51 iG~sGsGKSTllkll~gl 68 (271)
T 2ixe_A 51 VGPNGSGKSTVAALLQNL 68 (271)
T ss_dssp ECSTTSSHHHHHHHHTTS
T ss_pred ECCCCCHHHHHHHHHHCC
T ss_conf 999998799999999766
No 190
>>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6- bisphosphatase; transferase (phospho), hydrolase (phospho), glycolysis, bifunctional enzyme; HET: ATG; 2.00A {Rattus norvegicus} (A:1-231)
Probab=22.69 E-value=42 Score=16.27 Aligned_cols=15 Identities=33% Similarity=0.603 Sum_probs=12.5
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.||+-|||||+...+
T Consensus 45 vGlpGsGKTT~a~~l 59 (231)
T 1bif_A 45 VGLPARGKTYISKKL 59 (231)
T ss_dssp ECCTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999989999999
No 191
>>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein-protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} (A:96-293)
Probab=22.57 E-value=36 Score=16.63 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=13.3
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 97454450268999987
Q gi|254781089|r 1 MGLSESGKTTLLEAIFL 17 (80)
Q Consensus 1 mglsesgkttlleaifl 17 (80)
+|.+-+||||++..+--
T Consensus 13 ~G~nG~GKTTl~~~La~ 29 (198)
T 1rj9_A 13 VGVNGVGKTTTIAKLGR 29 (198)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHH
T ss_conf 24667774118999999
No 192
>>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} (A:)
Probab=22.49 E-value=42 Score=16.24 Aligned_cols=15 Identities=47% Similarity=0.771 Sum_probs=12.3
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+-.++
T Consensus 10 ~G~~GsGKsTia~~L 24 (175)
T 1via_A 10 IGFXGSGKSTLARAL 24 (175)
T ss_dssp ECCTTSCHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 858999899999999
No 193
>>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans} (A:365-552)
Probab=22.37 E-value=29 Score=17.13 Aligned_cols=15 Identities=53% Similarity=0.771 Sum_probs=12.2
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+...+
T Consensus 11 ~G~~GsGKTTla~~L 25 (188)
T 3cr8_A 11 TGLSGAGKSTLARAL 25 (188)
T ss_dssp EESSCHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 788888772899999
No 194
>>2c95_A Adenylate kinase 1; AP4A, nucleotide kinase, transferase, ATP-binding; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A (A:)
Probab=22.36 E-value=38 Score=16.51 Aligned_cols=15 Identities=47% Similarity=0.465 Sum_probs=12.3
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+-+.+
T Consensus 15 ~G~~GsGKsTla~~L 29 (196)
T 2c95_A 15 VGGPGSGKGTQCEKI 29 (196)
T ss_dssp EECTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999879999999
No 195
>>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} (A:)
Probab=22.36 E-value=38 Score=16.51 Aligned_cols=15 Identities=40% Similarity=0.415 Sum_probs=12.2
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+..++
T Consensus 12 ~G~~GsGKTT~a~~L 26 (194)
T 1qf9_A 12 LGGPGSGKGTQCANI 26 (194)
T ss_dssp EESTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999889999999
No 196
>>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} (A:)
Probab=21.75 E-value=40 Score=16.41 Aligned_cols=15 Identities=40% Similarity=0.459 Sum_probs=12.5
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+...+
T Consensus 18 ~G~~GsGKtT~a~~L 32 (199)
T 2bwj_A 18 IGGPGSGKGTQCEKL 32 (199)
T ss_dssp EECTTSSHHHHHHHH
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 899999989999999
No 197
>>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} (A:1-346)
Probab=21.72 E-value=38 Score=16.48 Aligned_cols=16 Identities=31% Similarity=0.497 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|-+-+||||++..|-
T Consensus 123 iGpNGaGKSTllkiL~ 138 (346)
T 3bk7_A 123 VGPNGTGKTTAVKILA 138 (346)
T ss_dssp ECCTTSSHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHH
T ss_conf 9999985999999996
No 198
>>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} (A:1-183,A:295-339)
Probab=21.51 E-value=39 Score=16.45 Aligned_cols=16 Identities=31% Similarity=0.468 Sum_probs=12.9
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
||-|-||||||...+-
T Consensus 46 ~GpSGSGKStLa~~La 61 (228)
T 3a8t_A 46 MGATGTGKSRLSIDLA 61 (228)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8988538999999999
No 199
>>1f60_A Elongation factor EEF1A; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} (A:1-238)
Probab=21.43 E-value=37 Score=16.57 Aligned_cols=17 Identities=29% Similarity=0.368 Sum_probs=13.5
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|--.+|||||.+++...
T Consensus 14 GHVD~GKTTL~~~Ll~~ 30 (238)
T 1f60_A 14 GHVDSGKSTTTGHLIYK 30 (238)
T ss_dssp ECTTSCHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHH
T ss_conf 70487788899999987
No 200
>>1d2e_A Elongation factor TU (EF-TU); G-protein, beta-barrel, RNA binding protein; HET: GDP; 1.94A {Bos taurus} (A:1-197)
Probab=21.32 E-value=40 Score=16.39 Aligned_cols=19 Identities=42% Similarity=0.438 Sum_probs=14.5
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q ss_conf 9745445026899998743
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFG 19 (80)
Q Consensus 1 mglsesgkttlleaiflfg 19 (80)
+|--.+|||||.+++.-..
T Consensus 9 iGHVDhGKSTL~~~Ll~~~ 27 (197)
T 1d2e_A 9 IGHVDHGKTTLTAAITKIL 27 (197)
T ss_dssp ESSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHH
T ss_conf 9467953889999998788
No 201
>>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens} (B:40-427)
Probab=21.23 E-value=42 Score=16.26 Aligned_cols=22 Identities=27% Similarity=0.534 Sum_probs=16.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 974544502689999874343210
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALAL 24 (80)
Q Consensus 1 mglsesgkttlleaiflfgealal 24 (80)
+|-+-+||+||+.+++ |...+.
T Consensus 9 vG~~g~GKStliN~L~--g~~~~~ 30 (388)
T 2qag_B 9 VGETGLGKSTLMDTLF--NTKFEG 30 (388)
T ss_dssp ECSTTSSSHHHHHHHH--TSCC--
T ss_pred ECCCCCCHHHHHHHHH--CCCCCC
T ss_conf 8899997999999985--898877
No 202
>>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} (A:1-67,A:132-252)
Probab=21.06 E-value=72 Score=15.00 Aligned_cols=58 Identities=26% Similarity=0.290 Sum_probs=28.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHH------CCCCCCC----EEEEEEEEEEEEE
Q ss_conf 745445026899998743432101238812467610220------2311343----0257667875111
Q gi|254781089|r 2 GLSESGKTTLLEAIFLFGEALALALSNDPVSVFLKSDVF------DGISKNQ----YGFFTGKIKVDAQ 60 (80)
Q Consensus 2 glsesgkttlleaiflfgealalalsndpvsvflksdvf------dgisknq----ygfftgkikvdaq 60 (80)
|-+-|||||+-..+---=..... ...+|..+.+.-|-| +|+.-.+ ..++.-+|-+|+-
T Consensus 29 G~~gsGKst~a~~l~~~l~~~~~-~~~~~~~~~~~~D~f~dviIvEG~y~l~~~~l~~~~D~~Ifid~~ 96 (188)
T 1uj2_A 29 GGTASGKSSVCAKIVQLLGQNEV-DYRQKQVVILSQDSFYDVVLFEGILAFYSQEVRDLFQMKLFVDTD 96 (188)
T ss_dssp CSTTSSHHHHHHHHHHHTTGGGS-CGGGCSEEEEEGGGGBSEEEEECTTTTSSHHHHHHCSEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHCCCCC-CCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHCCEEEEEECC
T ss_conf 98977889999999999663555-556654048724311263378611001450342001258999688
No 203
>>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} (A:1-194)
Probab=21.02 E-value=36 Score=16.66 Aligned_cols=20 Identities=30% Similarity=0.410 Sum_probs=14.7
Q ss_pred CCCCCCCHHHHHHHHHHHHH
Q ss_conf 97454450268999987434
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGE 20 (80)
Q Consensus 1 mglsesgkttlleaiflfge 20 (80)
+|-..+||+||++++.-..-
T Consensus 25 iG~~n~GKSTL~n~L~~~~~ 44 (194)
T 1wb1_A 25 FGHIDHGKTTLSKVLTEIAS 44 (194)
T ss_dssp EECTTSSHHHHHHHHHTTC-
T ss_pred ECCCCCCHHHHHHHHHHHCC
T ss_conf 92899849999999984068
No 204
>>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} (B:)
Probab=20.96 E-value=43 Score=16.19 Aligned_cols=16 Identities=44% Similarity=0.760 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||||+.++.
T Consensus 13 vG~~~vGKSsLi~~l~ 28 (214)
T 2fh5_B 13 VGLCDSGKTLLFVRLL 28 (214)
T ss_dssp ECSTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999989899999997
No 205
>>1js9_A Coat protein, capsid protein; plant virus, bromoviruses, BMV, icosahedral virus; 3.40A {Brome mosaic virus} (A:)
Probab=20.63 E-value=62 Score=15.38 Aligned_cols=48 Identities=27% Similarity=0.249 Sum_probs=33.0
Q ss_pred HHHHHHHHEECCCCEEEEEEHHHHCCCCCCCEEEEEEEEEEEEEEEECCC
Q ss_conf 74343210123881246761022023113430257667875111232001
Q gi|254781089|r 17 LFGEALALALSNDPVSVFLKSDVFDGISKNQYGFFTGKIKVDAQFILSEK 66 (80)
Q Consensus 17 lfgealalalsndpvsvflksdvfdgisknqygfftgkikvdaqfilsek 66 (80)
-|--|||.|-|...|..-.-.|.|.||+-.|.--. +|-+-..-.++++
T Consensus 118 sFq~ALAvADsSKeV~~AmY~d~Fkgitle~l~~L--~IYlYs~~a~aa~ 165 (189)
T 1js9_A 118 AFQVALAVADSSKEVVAAMYTDAFRGATLGDLLNL--QIYLYASEAVPAK 165 (189)
T ss_dssp HHHHCSSCEESSSSSCEEEETTTSSSCBTTTTTSC--CEEEECSSCBCTT
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCE--EEEEEEHHHCCCC
T ss_conf 98988875034067899875776457677783260--8999731102567
No 206
>>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens} (A:)
Probab=20.62 E-value=29 Score=17.13 Aligned_cols=16 Identities=44% Similarity=0.779 Sum_probs=13.1
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|...+|||||+.++.
T Consensus 27 iG~~~~GKTSLi~~l~ 42 (190)
T 2h57_A 27 LGLDNSGKTTIINKLK 42 (190)
T ss_dssp EECTTSSHHHHHHHTS
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 9999989999999997
No 207
>>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} (A:)
Probab=20.58 E-value=31 Score=16.99 Aligned_cols=15 Identities=47% Similarity=0.470 Sum_probs=12.2
Q ss_pred CCCCCCCHHHHHHHH
Q ss_conf 974544502689999
Q gi|254781089|r 1 MGLSESGKTTLLEAI 15 (80)
Q Consensus 1 mglsesgkttlleai 15 (80)
.|.+-|||||+.+.+
T Consensus 26 ~G~~GsGKsT~a~~L 40 (230)
T 2vp4_A 26 EGNIGSGKTTYLNHF 40 (230)
T ss_dssp ECSTTSCHHHHHHTT
T ss_pred ECCCCCCHHHHHHHH
T ss_conf 889987889999999
No 208
>>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} (A:)
Probab=20.19 E-value=38 Score=16.51 Aligned_cols=16 Identities=44% Similarity=0.372 Sum_probs=12.6
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+-|||||+...+-
T Consensus 11 eG~~GSGKtT~a~~La 26 (222)
T 1zak_A 11 SGAPASGKGTQCELIK 26 (222)
T ss_dssp EESTTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999999799999999
No 209
>>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} (A:93-282)
Probab=20.10 E-value=61 Score=15.41 Aligned_cols=17 Identities=47% Similarity=0.661 Sum_probs=13.2
Q ss_pred CCCCCCHHHHHHHHHHH
Q ss_conf 74544502689999874
Q gi|254781089|r 2 GLSESGKTTLLEAIFLF 18 (80)
Q Consensus 2 glsesgkttlleaiflf 18 (80)
|-+-|||||++..+-..
T Consensus 13 G~~GsGKST~l~~l~~~ 29 (190)
T 2ffh_A 13 GLQGSGKTTTAAKLALY 29 (190)
T ss_dssp CCTTSSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHH
T ss_conf 67667624579999999
No 210
>>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} (A:134-291)
Probab=20.10 E-value=45 Score=16.13 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=22.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHH
Q ss_conf 974544502689999874343210123881246761022
Q gi|254781089|r 1 MGLSESGKTTLLEAIFLFGEALALALSNDPVSVFLKSDV 39 (80)
Q Consensus 1 mglsesgkttlleaiflfgealalalsndpvsvflksdv 39 (80)
+|-|-.||+||+.++.-.|-+ -+|+|.+.+-...+.
T Consensus 20 ~G~sgaGKSTL~~~L~~~~~~---ivsdd~~~~r~~~~~ 55 (158)
T 1knx_A 20 TGRSGIGKSECALDLINKNHL---FVGDDAIEIYRLGNR 55 (158)
T ss_dssp EESSSSSHHHHHHHHHTTTCE---EEEEEEEEEEEETTE
T ss_pred ECCCCCCHHHHHHHHHHHCCC---EECCCCEEEEEECCE
T ss_conf 828999878999999981995---862682899993998
No 211
>>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum 3D7} (A:)
Probab=20.07 E-value=43 Score=16.19 Aligned_cols=16 Identities=19% Similarity=0.466 Sum_probs=13.7
Q ss_pred CCCCCCCHHHHHHHHH
Q ss_conf 9745445026899998
Q gi|254781089|r 1 MGLSESGKTTLLEAIF 16 (80)
Q Consensus 1 mglsesgkttlleaif 16 (80)
+|.+.+|||+|+.++.
T Consensus 35 iG~~~vGKSSLin~l~ 50 (228)
T 2qu8_A 35 SGAPNVGKSSFMNIVS 50 (228)
T ss_dssp ECSTTSSHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHH
T ss_conf 8999998999999995
No 212
>>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi} (A:1-94)
Probab=20.06 E-value=56 Score=15.59 Aligned_cols=17 Identities=35% Similarity=0.663 Sum_probs=13.7
Q ss_pred CCCEEEEEEEEEEEEEE
Q ss_conf 34302576678751112
Q gi|254781089|r 45 KNQYGFFTGKIKVDAQF 61 (80)
Q Consensus 45 knqygfftgkikvdaqf 61 (80)
.-.||-|.|.||||...
T Consensus 61 pya~gtfvgtikvd~nl 77 (94)
T 2p38_A 61 PYSLGTFVGTIRVDENL 77 (94)
T ss_dssp GGGTEEEEEEEEECTTS
T ss_pred CEEEEEEEEEEEECCCC
T ss_conf 25510168999954776
Done!