HHsearch alignment for GI: 254781091 and conserved domain: COG1103
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only].
Probab=99.84 E-value=8e-20 Score=139.80 Aligned_cols=335 Identities=21% Similarity=0.290 Sum_probs=215.7
Q ss_pred EECCCCCC-CCCCHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHH
Q ss_conf 01215788-89898999999999964288-----5236589999999999999999997298977898866853876445
Q gi|254781091|r 5 VYLDWNAT-APLLEVVRQSFVKSLDFYGN-----PSSVHKEGQKTRLYIEESRRIIADFCGAKPDHVVFTSSATEAANWV 78 (383)
Q Consensus 5 iYlD~aat-tp~~~~v~~a~~~~~~~~~n-----~~s~h~~~~~~~~~~e~aR~~ia~~~g~~~~ei~ft~~~T~a~~~~ 78 (383)
T Consensus 18 iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grld---ei~kPpI~~F~~dlaeFlg~D--~~R~t~GARe~Kfav 92 (382)
T COG1103 18 INVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLD---EITKPPIKDFLEDLAEFLGMD--EVRVTAGAREAKFAV 92 (382)
T ss_pred CCCCHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHCCC--EEEECCCCHHHHHHH
T ss_conf 034723406868799999999864886344310457411---025885888999889871986--344236512567999
Q ss_pred HHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHCCC--CCCEEEEECCC
Q ss_conf 56544210224566458733321221112222222222222222--222111023455324431135--65326540343
Q gi|254781091|r 79 LTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVL--SKGIVDIQALTDFLEQRNSTC--GIPMIAVMFVN 154 (383)
Q Consensus 79 i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~--~~g~i~~~~l~~~i~~~t~~~--~~~LVs~~~~~ 154 (383)
T Consensus 93 Mhal~~------~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~D 166 (382)
T COG1103 93 MHALCK------EGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVD 166 (382)
T ss_pred HHHHCC------CCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf 997515------89889974742278899998639758966789998457668888999999986248984489996357
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC-CC--CCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf 4443332112356520344653344432336554444433431068730543-32--23432011014574201221224
Q gi|254781091|r 155 NETGVIQPIKEIAQIVKEYQGILVVDAVQAAGRIPLSIEEIKADFLIISSHK-LG--APVGAGALVFREDILLPSPLLRG 231 (383)
Q Consensus 155 n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~~~~D~~~~S~hK-~~--GP~G~G~L~~r~~~~~~~p~~~G 231 (383)
T Consensus 167 g~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~P--iGvl~~~eE~ae~V~r~Sg 244 (382)
T COG1103 167 GEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAP--IGVLAMSEEWAEIVLRRSG 244 (382)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCEEEECCCCCHHCCCC--EEEEEEHHHHHHHHHHHCC
T ss_conf 77577221678999998729956851210223211366556787797248530011487--0477513677789986315
Q ss_pred CCCCCCC-C------CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
Q ss_conf 7742122-2------22221122210012211001002456532101233334444432100012232211036522898
Q gi|254781091|r 232 GDQEKGQ-R------AGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFS 304 (383)
Q Consensus 232 g~~e~~~-~------~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~ 304 (383)
T Consensus 245 ~~~~~KEvellGCT~rGapivTlmAS----fP~V~e-RVkrWdeEv~kaR~fv~elEk-igg~~qlG~rPk~H-dLm~Fe 317 (382)
T COG1103 245 RAFPKKEVELLGCTVRGAPIVTLMAS----FPHVVE-RVKRWDEEVEKARWFVAELEK-IGGVKQLGERPKNH-DLMKFE 317 (382)
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHC----CHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCCCC-CEEEEC
T ss_conf 44653325661432468438998740----779999-998788999999999999997-43088717797656-425533
Q ss_pred ECCC---------CHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 5799---------9999999987589699871133886433101467628887476599990788899999999999999
Q gi|254781091|r 305 IPFL---------KAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQK 375 (383)
Q Consensus 305 ~~~~---------~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~ 375 (383)
T Consensus 318 tp~f~eIakk~~r~gyFlY~ELK~RgI~---------G-I~~-------G~---Tk~~K~sv-yGl~~Eqve~V~~afke 376 (382)
T COG1103 318 TPVFHEIAKKHKRKGYFLYEELKKRGIH---------G-IQP-------GQ---TKYFKLSV-YGLSWEQVEYVVDAFKE 376 (382)
T ss_pred CCHHHHHHHHCCCCCEEEHHHHHHCCCC---------C-CCC-------CC---EEEEEEEE-ECCCHHHHHHHHHHHHH
T ss_conf 7128999875767854668988765866---------5-066-------75---13788875-05779999999999999
Q ss_pred HHHHH
Q ss_conf 99862
Q gi|254781091|r 376 IIRTS 380 (383)
Q Consensus 376 iv~~~ 380 (383)
T Consensus 377 I~eky 381 (382)
T COG1103 377 IAEKY 381 (382)
T ss_pred HHHHC
T ss_conf 99861