HHsearch alignment for GI: 254781091 and conserved domain: COG1168

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=99.70  E-value=1.2e-15  Score=114.53  Aligned_cols=326  Identities=18%  Similarity=0.232  Sum_probs=211.5

Q ss_pred             CCCHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf             9898999999999964--28852365899999999999999999972--9897789886685387644556544210224
Q gi|254781091|r   14 PLLEVVRQSFVKSLDF--YGNPSSVHKEGQKTRLYIEESRRIIADFC--GAKPDHVVFTSSATEAANWVLTPHFYQGSHK   89 (383)
Q Consensus        14 p~~~~v~~a~~~~~~~--~~n~~s~h~~~~~~~~~~e~aR~~ia~~~--g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~   89 (383)
T Consensus        38 ~~pp~i~~Al~~rvdhGvfGY~-------~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~-----  105 (388)
T COG1168          38 PTPPEIIEALRERVDHGVFGYP-------YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK-----  105 (388)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCC-------CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCC-----
T ss_conf             8887999999999865877887-------8877899999999997137778855289837512769999998376-----


Q ss_pred             CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCC--CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC---CH
Q ss_conf             566458733321221112222222222222222-2221--11023455324431135653265403434443332---11
Q gi|254781091|r   90 ISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVL-SKGI--VDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQ---PI  163 (383)
Q Consensus        90 ~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~-~~g~--i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~---pi  163 (383)
T Consensus       106 -~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~----vkl~iLCnPHNP~Grvwt~eeL  180 (388)
T COG1168         106 -PGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER----VKLFILCNPHNPTGRVWTKEEL  180 (388)
T ss_pred             -CCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCC----CCEEEEECCCCCCCCCCCHHHH
T ss_conf             -99826964888618999875169679746643469847752999999984377----6089993799999864369999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCC----C--CCCCC-CCCCCCE--EEEECCCC-CC--CCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf             2356520344653344432336----5--54444-4334310--68730543-32--23432011014574201221224
Q gi|254781091|r  164 KEIAQIVKEYQGILVVDAVQAA----G--RIPLS-IEEIKAD--FLIISSHK-LG--APVGAGALVFREDILLPSPLLRG  231 (383)
Q Consensus       164 ~~I~~~~~~~g~~~~vD~aqa~----g--~~~id-~~~~~~D--~~~~S~hK-~~--GP~G~G~L~~r~~~~~~~p~~~G  231 (383)
T Consensus       181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~-~a~~Ii~n~~lr-~~~~~-  257 (388)
T COG1168         181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLK-CAYIIISNRELR-AKFLK-  257 (388)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCCHHHH-HEEEEECCHHHH-HHHHH-
T ss_conf             999999998399898303356612169876654326955432359984052215604444-214783488999-99999-


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHH
Q ss_conf             77421222222211222100122110010024565321012333344444321000122322110365228985799999
Q gi|254781091|r  232 GDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFLKAE  311 (383)
Q Consensus       232 g~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~  311 (383)
T Consensus       258 --~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~-WLD~r~l~l~d~  334 (388)
T COG1168         258 --RLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLA-WLDCRELGLDDS  334 (388)
T ss_pred             --HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE-EEECCCCCCCHH
T ss_conf             --99873379984688999999997264999999999999899999999865987478668875666-532002389857


Q ss_pred             HHHH-HHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             9999-9875896998711338864331014676288874765999907888999999999999999986
Q gi|254781091|r  312 VLQI-ALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRT  379 (383)
Q Consensus       312 ~v~~-~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~  379 (383)
T Consensus       335 ~l~~~ll~~akVal~~G~~F--------------G~-~g~gf~RlN~a--cpr~~L~eal~ri~~al~~  386 (388)
T COG1168         335 ELAEFLLEEAKVALSPGSTF--------------GE-EGSGFVRLNFA--CPRAILEEALERLKRALKK  386 (388)
T ss_pred             HHHHHHHHHHCEECCCCCCC--------------CC-CCCCEEEEECC--CCHHHHHHHHHHHHHHHHC
T ss_conf             89999997515713578756--------------76-78745888637--9889999999999999852