HHsearch alignment for GI: 254781091 and conserved domain: COG1168
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=99.70 E-value=1.2e-15 Score=114.53 Aligned_cols=326 Identities=18% Similarity=0.232 Sum_probs=211.5
Q ss_pred CCCHHHHHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 9898999999999964--28852365899999999999999999972--9897789886685387644556544210224
Q gi|254781091|r 14 PLLEVVRQSFVKSLDF--YGNPSSVHKEGQKTRLYIEESRRIIADFC--GAKPDHVVFTSSATEAANWVLTPHFYQGSHK 89 (383)
Q Consensus 14 p~~~~v~~a~~~~~~~--~~n~~s~h~~~~~~~~~~e~aR~~ia~~~--g~~~~ei~ft~~~T~a~~~~i~~~~~~~~~~ 89 (383)
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~-------~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~----- 105 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYP-------YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK----- 105 (388)
T ss_pred CCCHHHHHHHHHHHHCCCCCCC-------CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCC-----
T ss_conf 8887999999999865877887-------8877899999999997137778855289837512769999998376-----
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCC--CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC---CH
Q ss_conf 566458733321221112222222222222222-2221--11023455324431135653265403434443332---11
Q gi|254781091|r 90 ISIDSLYISAIEHPAVYAGGHFPSHKIHKIPVL-SKGI--VDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQ---PI 163 (383)
Q Consensus 90 ~~~~~ii~s~~eH~s~~~~~~~~~~~v~~v~~~-~~g~--i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~---pi 163 (383)
T Consensus 106 -~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~----vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 106 -PGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER----VKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred -CCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCC----CCEEEEECCCCCCCCCCCHHHH
T ss_conf -99826964888618999875169679746643469847752999999984377----6089993799999864369999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCC----C--CCCCC-CCCCCCE--EEEECCCC-CC--CCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf 2356520344653344432336----5--54444-4334310--68730543-32--23432011014574201221224
Q gi|254781091|r 164 KEIAQIVKEYQGILVVDAVQAA----G--RIPLS-IEEIKAD--FLIISSHK-LG--APVGAGALVFREDILLPSPLLRG 231 (383)
Q Consensus 164 ~~I~~~~~~~g~~~~vD~aqa~----g--~~~id-~~~~~~D--~~~~S~hK-~~--GP~G~G~L~~r~~~~~~~p~~~G 231 (383)
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~-~a~~Ii~n~~lr-~~~~~- 257 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLK-CAYIIISNRELR-AKFLK- 257 (388)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCCHHHH-HEEEEECCHHHH-HHHHH-
T ss_conf 999999998399898303356612169876654326955432359984052215604444-214783488999-99999-
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHH
Q ss_conf 77421222222211222100122110010024565321012333344444321000122322110365228985799999
Q gi|254781091|r 232 GDQEKGQRAGTENYAVIGGFAVAAQQMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFLKAE 311 (383)
Q Consensus 232 g~~e~~~~~GT~~~~~i~~~~~al~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~ 311 (383)
T Consensus 258 --~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~-WLD~r~l~l~d~ 334 (388)
T COG1168 258 --RLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLA-WLDCRELGLDDS 334 (388)
T ss_pred --HHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEE-EEECCCCCCCHH
T ss_conf --99873379984688999999997264999999999999899999999865987478668875666-532002389857
Q ss_pred HHHH-HHHHCCCEEEECHHHCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999-9875896998711338864331014676288874765999907888999999999999999986
Q gi|254781091|r 312 VLQI-ALDLEGIAVSAGSACSSGKIKKNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRT 379 (383)
Q Consensus 312 ~v~~-~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~ 379 (383)
T Consensus 335 ~l~~~ll~~akVal~~G~~F--------------G~-~g~gf~RlN~a--cpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 335 ELAEFLLEEAKVALSPGSTF--------------GE-EGSGFVRLNFA--CPRAILEEALERLKRALKK 386 (388)
T ss_pred HHHHHHHHHHCEECCCCCCC--------------CC-CCCCEEEEECC--CCHHHHHHHHHHHHHHHHC
T ss_conf 89999997515713578756--------------76-78745888637--9889999999999999852