HHsearch alignment for GI: 254781091 and conserved domain: COG3977

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism].
Probab=98.18  E-value=0.00056  Score=43.83  Aligned_cols=226  Identities=17%  Similarity=0.197  Sum_probs=122.2

Q ss_pred             CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC---HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC----CCCE
Q ss_conf             1110234553244311356532654034344433321---12356520344653344432336554444433----4310
Q gi|254781091|r  126 IVDIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQP---IKEIAQIVKEYQGILVVDAVQAAGRIPLSIEE----IKAD  198 (383)
Q Consensus       126 ~i~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~p---i~~I~~~~~~~g~~~~vD~aqa~g~~~id~~~----~~~D  198 (383)
T Consensus       168 ~vDF~~l~--i~e~-----~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~N  240 (417)
T COG3977         168 HVDFEHLH--IGES-----TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNEN  240 (417)
T ss_pred             CCCHHHHC--CCCC-----EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCC
T ss_conf             37788813--3676-----0269964788988773648899989987422389679735667997862003564156787


Q ss_pred             -EEEECCCCCCCCC-CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCH-HHHHHHHHH-----
Q ss_conf             -6873054332234-32011014574201221224774212222222112221001221100100-245653210-----
Q gi|254781091|r  199 -FLIISSHKLGAPV-GAGALVFREDILLPSPLLRGGDQEKGQRAGTENYAVIGGFAVAAQQMVKD-IQKRSSRVF-----  270 (383)
Q Consensus       199 -~~~~S~hK~~GP~-G~G~L~~r~~~~~~~p~~~Gg~~e~~~~~GT~~~~~i~~~~~al~~~~~~-~~~~~~~~~-----  270 (383)
T Consensus       241 iilC~SLSK~GLPG~R~GIiIane~viqaitnmn~---iisL------ap~~~G~Aiaa~mie~gdl~rlseqVIrPFY~  311 (417)
T COG3977         241 IILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNG---IISL------APGRMGPAIAAEMIESGDLLRLSEQVIRPFYR  311 (417)
T ss_pred             EEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHCCC---EEEE------CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             78883143348987303579626999999971145---3531------67875689999886024288899986438889


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE-EEECC--CCHHHHHHHHHHCCCEEEECHHHCCCCCCCCHHHHHCCCC
Q ss_conf             12333344444321000122322110365228-98579--9999999998758969987113388643310146762888
Q gi|254781091|r  271 AIRDYLEQELKKLIPNIIIYGKDAERISNTCC-FSIPF--LKAEVLQIALDLEGIAVSAGSACSSGKIKKNHVLAAMGFD  347 (383)
Q Consensus       271 ~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~-~~~~~--~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~vl~~~g~~  347 (383)
T Consensus       312 ~~~q~~~~~l~~~lp~~~~~iHkpE--GAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~e--------wp  381 (417)
T COG3977         312 NRVQTTIAILRRYLPEYRCLIHKPE--GAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKE--------WP  381 (417)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCC--CCEEEHHHHCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCC--------CC
T ss_conf             8899999999986577652542687--5154133553587668999999986868994463247899988--------87


Q ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             74765999907888999999999999999986
Q gi|254781091|r  348 TSQGAVRVSCGDSTTQEDIDIFLNALQKIIRT  379 (383)
Q Consensus       348 ~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~  379 (383)
T Consensus       382 H~hqC~Rmn~~~--~~e~ie~Gva~lae~ve~  411 (417)
T COG3977         382 HTHQCMRMNYVP--EPEKIEKGVAILAEEVER  411 (417)
T ss_pred             CCCCEEEEECCC--CHHHHHHHHHHHHHHHHH
T ss_conf             612247875369--879999999999999999