HHsearch alignment for GI: 254781091 and conserved domain: KOG1411
>KOG1411 consensus.
Probab=97.96 E-value=6.3e-05 Score=49.59 Aligned_cols=265 Identities=16% Similarity=0.135 Sum_probs=142.0
Q ss_pred HHEEEEC--CHHHHHHHHHHHHHHHCCCCCCCCEEEECCC---CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHH
Q ss_conf 7898866--8538764455654421022456645873332---122111222222222222222--22221110234553
Q gi|254781091|r 63 DHVVFTS--SATEAANWVLTPHFYQGSHKISIDSLYISAI---EHPAVYAGGHFPSHKIHKIPV--LSKGIVDIQALTDF 135 (383)
Q Consensus 63 ~ei~ft~--~~T~a~~~~i~~~~~~~~~~~~~~~ii~s~~---eH~s~~~~~~~~~~~v~~v~~--~~~g~i~~~~l~~~ 135 (383)
T Consensus 119 ~Ri~tvQ~lSGTGaLriga~Fl~----~f~~~~~I~ip~PTWgNh~~---if~~ag~~~~~yrYyd~~t~gld~~g~led 191 (427)
T KOG1411 119 KRIVTVQTLSGTGALRVGAEFLA----RFYPSRDIYIPDPTWGNHKN---IFKDAGLPVKFYRYYDPKTRGLDFKGMLED 191 (427)
T ss_pred CCEEEEEECCCCCHHHHHHHHHH----HHCCCCCEEECCCCCCCCCC---CCCCCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf 53268874057532667789998----62666615615875345676---300258612566630541001356778998
Q ss_pred HHHHHCCCCCCEEEEECC--CCCCCC---CCCHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCC--------CCEEEE
Q ss_conf 244311356532654034--344433---32112356520344653344432-3365544444334--------310687
Q gi|254781091|r 136 LEQRNSTCGIPMIAVMFV--NNETGV---IQPIKEIAQIVKEYQGILVVDAV-QAAGRIPLSIEEI--------KADFLI 201 (383)
Q Consensus 136 i~~~t~~~~~~LVs~~~~--~n~tG~---i~pi~~I~~~~~~~g~~~~vD~a-qa~g~~~id~~~~--------~~D~~~ 201 (383)
T Consensus 192 l~~~p~g---s~-ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~l 267 (427)
T KOG1411 192 LGEAPEG---SI-ILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILL 267 (427)
T ss_pred HHCCCCC---CE-EEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEE
T ss_conf 7417888---48-9852210388788960888999998765403561466554042358702457899999870775676
Q ss_pred E-CCCC-C--CCCCCCHHHH-CCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCC------CCCHHHHHHCCC
Q ss_conf 3-0543-3--2234320110-145742-----------012212247742122222221122------210012211001
Q gi|254781091|r 202 I-SSHK-L--GAPVGAGALV-FREDIL-----------LPSPLLRGGDQEKGQRAGTENYAV------IGGFAVAAQQMV 259 (383)
Q Consensus 202 ~-S~hK-~--~GP~G~G~L~-~r~~~~-----------~~~p~~~Gg~~e~~~~~GT~~~~~------i~~~~~al~~~~ 259 (383)
T Consensus 268 aQSyAKNMGLYgER-vGa~svvc~~ad~A~rV~SQlk~liRpmYS-----------nPP~hGArIv~~Il~d~~l~~~W~ 335 (427)
T KOG1411 268 AQSYAKNMGLYGER-VGALSVVCKDADEAKRVESQLKILIRPMYS-----------NPPLHGARIVATILSDPDLKNQWL 335 (427)
T ss_pred EHHHHHHCCHHHHC-CCEEEEEECCHHHHHHHHHHHHHHHCCCCC-----------CCCCCCHHHHHHCCCCHHHHHHHH
T ss_conf 55565523203320-350578726788888788778888601135-----------898651145554047767777888
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCH
Q ss_conf 00245653210123333444443210001223221103652289857999999999987589699871133886433101
Q gi|254781091|r 260 KDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIKKNH 339 (383)
Q Consensus 260 ~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~~~~ 339 (383)
T Consensus 336 ~evk~MadRi~~mR~~L~d~L~~~--gs~~~W~hI~~QIGM--F~fTgl~peQv~~l~ke~~iYmT-------------- 397 (427)
T KOG1411 336 GEVKGMADRIISMRQQLFDALEKE--GSPGNWSHITKQIGM--FCFTGLNPEQVDWLTKEYHIYLT-------------- 397 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHE--EEECCCCHHHHHHHHHHHEEEEC--------------
T ss_conf 889998776655688876776357--987667999976200--33247899999998765236652--------------
Q ss_pred HHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 46762888747659999078889999999999999999862
Q gi|254781091|r 340 VLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQKIIRTS 380 (383)
Q Consensus 340 vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~~iv~~~ 380 (383)
T Consensus 398 ---------~d--GRiS~aG~ss-~nV~yLa~aih~vtk~~ 426 (427)
T KOG1411 398 ---------KD--GRISMAGLSS-SNVPYLADAIHAVTKNT 426 (427)
T ss_pred ---------CC--CEEEECCCCC-CCCCCCCHHHHHHHCCC
T ss_conf ---------58--6376234565-67754111067674378