HHsearch alignment for GI: 254781091 and conserved domain: KOG2040
>KOG2040 consensus.
Probab=98.14 E-value=5.9e-05 Score=49.74 Aligned_cols=276 Identities=18% Similarity=0.221 Sum_probs=143.1
Q ss_pred HHHHHHHCCCCHHHEEEECCHHHHHH-HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC--CCCCCCCCCCCCCCC
Q ss_conf 99999972989778988668538764-455654421022456645873332122111222222--222222222222211
Q gi|254781091|r 51 RRIIADFCGAKPDHVVFTSSATEAAN-WVLTPHFYQGSHKISIDSLYISAIEHPAVYAGGHFP--SHKIHKIPVLSKGIV 127 (383)
Q Consensus 51 R~~ia~~~g~~~~ei~ft~~~T~a~~-~~i~~~~~~~~~~~~~~~ii~s~~eH~s~~~~~~~~--~~~v~~v~~~~~g~i 127 (383)
T Consensus 169 QTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~------krkk~vvd~~~hpqtlsV~~TRa~~~~i~---------v 233 (1001)
T KOG2040 169 QTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN------KRKKFVVDSNCHPQTLSVVKTRAKGFGIK---------V 233 (1001)
T ss_pred HHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHC------CCCEEEECCCCCCCHHHHHHCCCCCCCEE---------E
T ss_conf 77766502886554233213125899999987632------26428865877833324652036665336---------8
Q ss_pred CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCC
Q ss_conf 10234553244311356532654034344433321123565203446533444323365-54444433431068730543
Q gi|254781091|r 128 DIQALTDFLEQRNSTCGIPMIAVMFVNNETGVIQPIKEIAQIVKEYQGILVVDAVQAAG-RIPLSIEEIKADFLIISSHK 206 (383)
Q Consensus 128 ~~~~l~~~i~~~t~~~~~~LVs~~~~~n~tG~i~pi~~I~~~~~~~g~~~~vD~aqa~g-~~~id~~~~~~D~~~~S~hK 206 (383)
T Consensus 234 ~~~~~~~~~~s~~~---v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~a-tDLLaLtiLrpPgefGaDIavGSsQR 308 (1001)
T KOG2040 234 VVSDIKEADYSSKD---VSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMA-TDLLALTILRPPGEFGADIAVGSSQR 308 (1001)
T ss_pred EECCHHHHHCCCCC---EEEEEEECCC-CCCCCCCHHHHHHHHHCCCCEEEEE-HHHHHHHCCCCHHHCCCEEEECCCCC
T ss_conf 84477872023355---2169997588-7776078899999763068558984-02568870278233284146414321
Q ss_pred CC------CCCCCHHHHCCCCCCCCCCC-CCC------CCC---------C--CCCCCCCCCCCCC----CCHH--HHHH
Q ss_conf 32------23432011014574201221-224------774---------2--1222222211222----1001--2211
Q gi|254781091|r 207 LG------APVGAGALVFREDILLPSPL-LRG------GDQ---------E--KGQRAGTENYAVI----GGFA--VAAQ 256 (383)
Q Consensus 207 ~~------GP~G~G~L~~r~~~~~~~p~-~~G------g~~---------e--~~~~~GT~~~~~i----~~~~--~al~ 256 (383)
T Consensus 309 FGVPlGYGGPH-AaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiY 387 (1001)
T KOG2040 309 FGVPLGYGGPH-AAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIY 387 (1001)
T ss_pred CCCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 37655678840-88999999997438973575530566668899988889988763201001467999998778777543
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf 00100245653210123333444443210001223221103652289857999999999987589699871133886433
Q gi|254781091|r 257 QMVKDIQKRSSRVFAIRDYLEQELKKLIPNIIIYGKDAERISNTCCFSIPFLKAEVLQIALDLEGIAVSAGSACSSGKIK 336 (383)
Q Consensus 257 ~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~v~~~l~~~gI~v~~G~~C~~~~~~ 336 (383)
T Consensus 388 HGp~gL~~IArrvh~~T~~l~~~l~~ag--hel~~k~---fFDTLkI~~~~-s~~~~l~rA~~~~iNlr~---------- 451 (1001)
T KOG2040 388 HGPHGLKEIARRVHNLTLILAEGLKNAG--HELQHKP---FFDTLKIRCGC-SAEEVLDRAAKRQINLRL---------- 451 (1001)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCC--HHHCCCC---CCCEEEEEECC-CHHHHHHHHHHHCCCEEE----------
T ss_conf 0837899999998889999999876336--2330455---30037988368-599999999862366599----------
Q ss_pred CCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10146762888747659999078889999999999999
Q gi|254781091|r 337 KNHVLAAMGFDTSQGAVRVSCGDSTTQEDIDIFLNALQ 374 (383)
Q Consensus 337 ~~~vl~~~g~~~~~g~vRiS~~~~nT~~dId~l~~~L~ 374 (383)
T Consensus 452 -----------~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040 452 -----------VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred -----------EECCCEEEEECCCCCHHHHHHHHHHHC
T ss_conf -----------606843686044353877999999972